Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:51:15 (31098): wrapper (7.7.26015): starting
08:51:15 (31098): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 08:51:15] Arguments: --nthreads 8
[2025-10-13 08:51:15] Threads: 8
[2025-10-13 08:51:15] Checking for CVMFS
[2025-10-13 08:51:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:51:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:51:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:51:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:51:17] 2.11.2.0 32577 221692 142564 151652 1 60 21324183 25165825 4632 130560 0 106567683 99.856 71479854 3329 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 08:51:17] CVMFS is ok
[2025-10-13 08:51:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:51:17] Checking for apptainer binary...
[2025-10-13 08:51:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:51:17] Running /usr/bin/apptainer --version
[2025-10-13 08:51:17] apptainer version 1.3.2-1.el7
[2025-10-13 08:51:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:51:29] cg-vwn389.simple-grid.lan
[2025-10-13 08:51:29] apptainer works
[2025-10-13 08:51:29] Set ATHENA_PROC_NUMBER=8
[2025-10-13 08:51:29] Set ATHENA_CORE_NUMBER=8
[2025-10-13 08:51:29] Starting ATLAS job with PandaID=6840537529
[2025-10-13 08:51:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:10:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:10:40] 2025-10-13 11:09:38,670 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:10:40] 2025-10-13 11:09:38,675 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:10:40] 2025-10-13 11:09:38,675 | INFO     | sum of square deviations: 4394577280.5
[2025-10-13 13:10:40] 2025-10-13 11:09:38,677 | INFO     | sum of deviations: 98983676145.5
[2025-10-13 13:10:40] 2025-10-13 11:09:38,677 | INFO     | mean x: 1760346318.5
[2025-10-13 13:10:40] 2025-10-13 11:09:38,677 | INFO     | mean y: 2425961.7809917354
[2025-10-13 13:10:40] 2025-10-13 11:09:38,678 | INFO     | -- intersect: -39647701632.40302
[2025-10-13 13:10:40] 2025-10-13 11:09:38,678 | INFO     | intersect: -39647701632.40302
[2025-10-13 13:10:40] 2025-10-13 11:09:38,678 | INFO     | chi2: 5.7136120054975565
[2025-10-13 13:10:40] 2025-10-13 11:09:38,679 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,680 | INFO     | sum of deviations: 112424995004.99998
[2025-10-13 13:10:40] 2025-10-13 11:09:38,681 | INFO     | mean x: 1760346166.0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,681 | INFO     | mean y: 2433491.974683544
[2025-10-13 13:10:40] 2025-10-13 11:09:38,681 | INFO     | -- intersect: -47942776561.01576
[2025-10-13 13:10:40] 2025-10-13 11:09:38,681 | INFO     | intersect: -47942776561.01576
[2025-10-13 13:10:40] 2025-10-13 11:09:38,681 | INFO     | chi2: 4.979821046274515
[2025-10-13 13:10:40] 2025-10-13 11:09:38,681 | INFO     | current chi2=4.979821046274515 (change=12.84285594676359 %)
[2025-10-13 13:10:40] 2025-10-13 11:09:38,681 | INFO     | right removable region: 236
[2025-10-13 13:10:40] 2025-10-13 11:09:38,682 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,684 | INFO     | sum of deviations: 19506461172.0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,684 | INFO     | mean x: 1760346471.0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,684 | INFO     | mean y: 2471342.1983122365
[2025-10-13 13:10:40] 2025-10-13 11:09:38,684 | INFO     | -- intersect: -8316333032.946707
[2025-10-13 13:10:40] 2025-10-13 11:09:38,684 | INFO     | intersect: -8316333032.946707
[2025-10-13 13:10:40] 2025-10-13 11:09:38,685 | INFO     | chi2: 1.4625267959589274
[2025-10-13 13:10:40] 2025-10-13 11:09:38,685 | INFO     | current chi2=1.4625267959589274 (change=74.40276318112421 %)
[2025-10-13 13:10:40] 2025-10-13 11:09:38,685 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,687 | INFO     | sum of deviations: -6052067176.0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,687 | INFO     | mean x: 1760346623.5
[2025-10-13 13:10:40] 2025-10-13 11:09:38,687 | INFO     | mean y: 2486442.224137931
[2025-10-13 13:10:40] 2025-10-13 11:09:38,687 | INFO     | -- intersect: 2753974433.6364717
[2025-10-13 13:10:40] 2025-10-13 11:09:38,688 | INFO     | intersect: 2753974433.6364717
[2025-10-13 13:10:40] 2025-10-13 11:09:38,688 | INFO     | chi2: 0.8102670196996316
[2025-10-13 13:10:40] 2025-10-13 11:09:38,688 | INFO     | current chi2=0.8102670196996316 (change=44.59814193227359 %)
[2025-10-13 13:10:40] 2025-10-13 11:09:38,688 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,690 | INFO     | sum of deviations: -4523835274.0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,690 | INFO     | mean x: 1760346776.0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,690 | INFO     | mean y: 2485480.105726872
[2025-10-13 13:10:40] 2025-10-13 11:09:38,691 | INFO     | -- intersect: 2198106826.8303156
[2025-10-13 13:10:40] 2025-10-13 11:09:38,691 | INFO     | intersect: 2198106826.8303156
[2025-10-13 13:10:40] 2025-10-13 11:09:38,691 | INFO     | chi2: 0.7929268923198309
[2025-10-13 13:10:40] 2025-10-13 11:09:38,691 | INFO     | current chi2=0.7929268923198309 (change=2.140050990379524 %)
[2025-10-13 13:10:40] 2025-10-13 11:09:38,691 | INFO     | left removable region: 30
[2025-10-13 13:10:40] 2025-10-13 11:09:38,692 | INFO     | sum of square deviations: 2710627567.5
[2025-10-13 13:10:40] 2025-10-13 11:09:38,693 | INFO     | sum of deviations: 6048475221.5
[2025-10-13 13:10:40] 2025-10-13 11:09:38,693 | INFO     | mean x: 1760347050.5
[2025-10-13 13:10:40] 2025-10-13 11:09:38,693 | INFO     | mean y: 2497661.024271845
[2025-10-13 13:10:40] 2025-10-13 11:09:38,693 | INFO     | -- intersect: -3925528322.2759438
[2025-10-13 13:10:40] 2025-10-13 11:09:38,694 | INFO     | intersect: -3925528322.2759438
[2025-10-13 13:10:40] 2025-10-13 11:09:38,694 | INFO     | chi2: 0.0004120432070461823
[2025-10-13 13:10:40] 2025-10-13 11:09:38,694 | INFO     | -- intersect: -3925528322.2759438
[2025-10-13 13:10:40] 2025-10-13 11:09:38,694 | INFO     | current memory leak: 2.23 B/s (using 206 data points, chi2=0.00)
[2025-10-13 13:10:40] 2025-10-13 11:09:38,695 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 13:10:40] 2025-10-13 11:09:38,695 | INFO     | ..............................
[2025-10-13 13:10:40] 2025-10-13 11:09:38,695 | INFO     | . Timing measurements:
[2025-10-13 13:10:40] 2025-10-13 11:09:38,695 | INFO     | . get job = 0 s
[2025-10-13 13:10:40] 2025-10-13 11:09:38,695 | INFO     | . initial setup = 5 s
[2025-10-13 13:10:40] 2025-10-13 11:09:38,695 | INFO     | . payload setup = 125 s
[2025-10-13 13:10:40] 2025-10-13 11:09:38,695 | INFO     | . stage-in = 0 s
[2025-10-13 13:10:40] 2025-10-13 11:09:38,695 | INFO     | . payload execution = 14867 s
[2025-10-13 13:10:40] 2025-10-13 11:09:38,696 | INFO     | . stage-out = 4 s
[2025-10-13 13:10:40] 2025-10-13 11:09:38,696 | INFO     | . log creation = 1 s
[2025-10-13 13:10:40] 2025-10-13 11:09:38,696 | INFO     | ..............................
[2025-10-13 13:10:40] 2025-10-13 11:09:38,895 | INFO     | 
[2025-10-13 13:10:40] 2025-10-13 11:09:38,895 | INFO     | job summary report
[2025-10-13 13:10:40] 2025-10-13 11:09:38,895 | INFO     | --------------------------------------------------
[2025-10-13 13:10:40] 2025-10-13 11:09:38,895 | INFO     | PanDA job id: 6840537529
[2025-10-13 13:10:40] 2025-10-13 11:09:38,895 | INFO     | task id: 46676269
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | errors: (none)
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | pilot state: finished 
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | transexitcode: 0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | exeerrorcode: 0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | exeerrordiag: 
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | exitcode: 0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | exitmsg: OK
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | cpuconsumptiontime: 55996 s
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | nevents: 400
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | neventsw: 0
[2025-10-13 13:10:40] 2025-10-13 11:09:38,896 | INFO     | pid: 9084
[2025-10-13 13:10:40] 2025-10-13 11:09:38,897 | INFO     | pgrp: 9084
[2025-10-13 13:10:40] 2025-10-13 11:09:38,897 | INFO     | corecount: 8
[2025-10-13 13:10:40] 2025-10-13 11:09:38,897 | INFO     | event service: False
[2025-10-13 13:10:40] 2025-10-13 11:09:38,897 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 22: 2348914, 33: 2348942, 44: 2348998, 55: 2349154, 65: 2349182, 76: 2349210, 86: 2349528, 87: 2349556, 14997: 2380180
[2025-10-13 13:10:40] 2025-10-13 11:09:38,897 | INFO     | --------------------------------------------------
[2025-10-13 13:10:40] 2025-10-13 11:09:38,897 | INFO     | 
[2025-10-13 13:10:40] 2025-10-13 11:09:38,897 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-10-13 13:10:40] 2025-10-13 11:09:39,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,442 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,442 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,443 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,443 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,443 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,443 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:10:40] 2025-10-13 11:09:39,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,444 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:10:40] 2025-10-13 11:09:39,444 | INFO     | job 6840537529 has completed (purged errors)
[2025-10-13 13:10:40] 2025-10-13 11:09:39,444 | INFO     | overall cleanup function is called
[2025-10-13 13:10:40] 2025-10-13 11:09:40,453 | INFO     | --- collectZombieJob: --- 10, [9084]
[2025-10-13 13:10:40] 2025-10-13 11:09:40,453 | INFO     | zombie collector waiting for pid 9084
[2025-10-13 13:10:40] 2025-10-13 11:09:40,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:10:40] 2025-10-13 11:09:40,454 | INFO     | collected zombie processes
[2025-10-13 13:10:40] 2025-10-13 11:09:40,454 | INFO     | will attempt to kill all subprocesses of pid=9084
[2025-10-13 13:10:40] 2025-10-13 11:09:40,622 | INFO     | process IDs to be killed: [9084] (in reverse order)
[2025-10-13 13:10:40] 2025-10-13 11:09:41,394 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:10:40] 2025-10-13 11:09:41,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:10:40] 2025-10-13 11:09:41,397 | INFO     | did not find any defunct processes belonging to 9084
[2025-10-13 13:10:40] 2025-10-13 11:09:41,401 | INFO     | did not find any defunct processes belonging to 9084
[2025-10-13 13:10:40] 2025-10-13 11:09:41,401 | INFO     | ready for new job
[2025-10-13 13:10:40] 2025-10-13 11:09:41,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:10:40] 2025-10-13 11:09:41,404 | INFO     | ***************************************
[2025-10-13 13:10:40] 2025-10-13 11:09:41,404 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:10:40] 2025-10-13 11:09:41,404 | INFO     | ***************************************
[2025-10-13 13:10:40] 2025-10-13 11:09:41,404 | INFO     | 
[2025-10-13 13:10:40] 2025-10-13 11:09:41,405 | INFO     | pilot is running in a VM
[2025-10-13 13:10:40] 2025-10-13 11:09:41,405 | INFO     | architecture information:
[2025-10-13 13:10:40] 2025-10-13 11:09:41,412 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:10:40] 2025-10-13 11:09:41,558 | INFO     | cat /etc/os-release:
[2025-10-13 13:10:40] NAME="CentOS Linux"
[2025-10-13 13:10:40] VERSION="7 (Core)"
[2025-10-13 13:10:40] ID="centos"
[2025-10-13 13:10:40] ID_LIKE="rhel fedora"
[2025-10-13 13:10:40] VERSION_ID="7"
[2025-10-13 13:10:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:10:40] ANSI_COLOR="0;31"
[2025-10-13 13:10:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:10:40] HOME_URL="https://www.centos.org/"
[2025-10-13 13:10:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:10:40] 
[2025-10-13 13:10:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:10:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:10:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:10:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:10:40] 
[2025-10-13 13:10:40] 2025-10-13 11:09:41,558 | INFO     | ***************************************
[2025-10-13 13:10:40] 2025-10-13 11:09:42,064 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-10-13 13:10:40] 2025-10-13 11:09:42,234 | INFO     | sufficient remaining disk space (495939747840 B)
[2025-10-13 13:10:40] 2025-10-13 11:09:42,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:10:40] 2025-10-13 11:09:42,234 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:10:40] 2025-10-13 11:09:42,234 | INFO     | update_server=False
[2025-10-13 13:10:40] 2025-10-13 11:09:42,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:10:40] 2025-10-13 11:09:42,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:10:40] 2025-10-13 11:09:42,237 | INFO     | aborting loop
[2025-10-13 13:10:40] 2025-10-13 11:09:42,561 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:10:40] 2025-10-13 11:09:42,841 | INFO     | all payload control threads have been joined
[2025-10-13 13:10:40] 2025-10-13 11:09:43,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:10:40] 2025-10-13 11:09:43,171 | INFO     | all job control threads have been joined
[2025-10-13 13:10:40] 2025-10-13 11:09:43,233 | INFO     | all data control threads have been joined
[2025-10-13 13:10:40] 2025-10-13 11:09:43,240 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:43,243 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:43,339 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:43,811 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:43,846 | INFO     | [payload] control thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:43,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:10:40] 2025-10-13 11:09:44,081 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:44,091 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:44,177 | INFO     | [job] control thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:44,238 | INFO     | [data] control thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:44,350 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:44,379 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:44,568 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:44,569 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:44,698 | INFO     | [job] validate thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:44,915 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:47,143 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:10:40] 2025-10-13 11:09:57,336 [wrapper] supervise_pilot (15 min periods counter: 18)
[2025-10-13 13:10:40] 2025-10-13 11:10:11,203 | INFO     | PID=2539 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 13:10:40] 2025-10-13 11:10:11,204 | INFO     | .. there are 9 such processes running
[2025-10-13 13:10:40] 2025-10-13 11:10:11,205 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:10:40] 2025-10-13 11:10:11,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:10:40] 2025-10-13 11:10:11,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:10:40] 2025-10-13 11:10:29,604 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:10:40] 2025-10-13 11:10:30,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139829044385600)>', '<ExcThread(monitor, started 139828616222464)>']
[2025-10-13 13:10:40] 2025-10-13 11:10:31,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:10:40] 2025-10-13 11:10:31,326 | INFO     | [monitor] control thread has ended
[2025-10-13 13:10:40] 2025-10-13 11:10:36,020 | INFO     | all workflow threads have been joined
[2025-10-13 13:10:40] 2025-10-13 11:10:36,020 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:10:40] 2025-10-13 11:10:36,021 | INFO     | traces error code: 0
[2025-10-13 13:10:40] 2025-10-13 11:10:36,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:10:40] 2025-10-13 11:10:36,448 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:10:40] 2025-10-13 11:10:36,504 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:10:40] 2025-10-13 11:10:36,592 [wrapper] pilotpid: 2539
[2025-10-13 13:10:40] 2025-10-13 11:10:36,703 [wrapper] Pilot exit status: 0
[2025-10-13 13:10:40] 2025-10-13 11:10:36,849 [wrapper] pandaids: 6840537529
[2025-10-13 13:10:40] 2025-10-13 11:10:36,905 [wrapper] cleanup supervisor_pilot  6092 2540
[2025-10-13 13:10:40] 2025-10-13 11:10:37,041 [wrapper] Test setup, not cleaning
[2025-10-13 13:10:40] 2025-10-13 11:10:37,108 [wrapper] apfmon messages muted
[2025-10-13 13:10:40] 2025-10-13 11:10:37,210 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:10:40] 2025-10-13 11:10:37,294 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:10:40]  *** Error codes and diagnostics ***
[2025-10-13 13:10:40]     "exeErrorCode": 0,
[2025-10-13 13:10:40]     "exeErrorDiag": "",
[2025-10-13 13:10:40]     "pilotErrorCode": 0,
[2025-10-13 13:10:40]     "pilotErrorDiag": "",
[2025-10-13 13:10:40]  *** Listing of results directory ***
[2025-10-13 13:10:40] total 423348
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc    557409 Oct 12 20:20 pilot3.tar.gz
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc      5112 Oct 12 20:48 queuedata.json
[2025-10-13 13:10:40] -rwx------. 1 boinc boinc     36292 Oct 12 20:50 runpilot2-wrapper.sh
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc       100 Oct 13 08:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:10:40] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 08:51 run_atlas
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc       105 Oct 13 08:51 job.xml
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc      6390 Oct 13 08:51 init_data.xml
[2025-10-13 13:10:40] -rw-r--r--. 2 boinc boinc 222856809 Oct 13 08:51 EVNT.46676267._004426.pool.root.1
[2025-10-13 13:10:40] -rw-r--r--. 2 boinc boinc     15120 Oct 13 08:51 start_atlas.sh
[2025-10-13 13:10:40] drwxrwx--x. 2 boinc boinc        68 Oct 13 08:51 shared
[2025-10-13 13:10:40] -rw-r--r--. 2 boinc boinc    569681 Oct 13 08:51 input.tar.gz
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc         0 Oct 13 08:51 boinc_lockfile
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc      2550 Oct 13 08:51 pandaJob.out
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc    972849 Oct 13 08:55 agis_schedconf.cvmfs.json
[2025-10-13 13:10:40] drwx------. 5 boinc boinc      4096 Oct 13 08:55 pilot3
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc 201704380 Oct 13 13:06 HITS.46676269._086676.pool.root.1
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc       531 Oct 13 13:07 boinc_task_state.xml
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc      1013 Oct 13 13:07 memory_monitor_summary.json
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc   1560580 Oct 13 13:08 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc    481774 Oct 13 13:08 log.46676269._086676.job.log.tgz.1
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc      7775 Oct 13 13:09 heartbeat.json
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc        95 Oct 13 13:10 pilot_heartbeat.json
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc      8192 Oct 13 13:10 boinc_mmap_file
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc        28 Oct 13 13:10 wrapper_checkpoint.txt
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc      4884 Oct 13 13:10 pilotlog.txt
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc   2047101 Oct 13 13:10 log.46676269._086676.job.log.1
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc       357 Oct 13 13:10 output.list
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc       620 Oct 13 13:10 runtime_log
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc   2549760 Oct 13 13:10 result.tar.gz
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc      8717 Oct 13 13:10 runtime_log.err
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc       656 Oct 13 13:10 qYzNDm1JGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKAlNDmcjPCbm.diag
[2025-10-13 13:10:40] -rw-r--r--. 1 boinc boinc     20593 Oct 13 13:10 stderr.txt
[2025-10-13 13:10:40] HITS file was successfully produced:
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc 201704380 Oct 13 13:06 shared/HITS.pool.root.1
[2025-10-13 13:10:40]  *** Contents of shared directory: ***
[2025-10-13 13:10:40] total 417684
[2025-10-13 13:10:40] -rw-r--r--. 2 boinc boinc 222856809 Oct 13 08:51 ATLAS.root_0
[2025-10-13 13:10:40] -rw-r--r--. 2 boinc boinc     15120 Oct 13 08:51 start_atlas.sh
[2025-10-13 13:10:40] -rw-r--r--. 2 boinc boinc    569681 Oct 13 08:51 input.tar.gz
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc 201704380 Oct 13 13:06 HITS.pool.root.1
[2025-10-13 13:10:40] -rw-------. 1 boinc boinc   2549760 Oct 13 13:10 result.tar.gz
13:10:41 (31098): run_atlas exited; CPU time 56207.939440
13:10:41 (31098): called boinc_finish(0)

</stderr_txt>
]]>

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