Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
16:48:25 (1291597): wrapper (7.7.26015): starting
16:48:25 (1291597): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 16:48:25] Arguments: --nthreads 4
[2025-10-12 16:48:25] Threads: 4
[2025-10-12 16:48:25] Checking for CVMFS
[2025-10-12 16:48:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:48:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:48:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:48:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:48:26] 2.11.3.0 1528564 5048 67564 151640 2 188 2893692 4096000 5502 130560 0 22051013 99.998 171393 683 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 16:48:26] CVMFS is ok
[2025-10-12 16:48:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:48:26] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 16:48:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 16:48:26] Further information can be found at the LHC@home message board.
[2025-10-12 16:48:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:48:26] Checking for apptainer binary...
[2025-10-12 16:48:26] apptainer is not installed, using version from CVMFS
[2025-10-12 16:48:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:48:26] officedc-System-Product-Name
[2025-10-12 16:48:26] apptainer works
[2025-10-12 16:48:26] Set ATHENA_PROC_NUMBER=4
[2025-10-12 16:48:26] Set ATHENA_CORE_NUMBER=4
[2025-10-12 16:48:26] Starting ATLAS job with PandaID=6840428586
[2025-10-12 16:48:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:41:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:41:52] 2025-10-13 00:40:45,365 | INFO     | using path: /var/lib/boinc3/slots/2/PanDA_Pilot-6840428586/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:41:52] 2025-10-13 00:40:45,366 | INFO     | extracted standard info from prmon json
[2025-10-12 18:41:52] 2025-10-13 00:40:45,366 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:41:52] 2025-10-13 00:40:45,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:41:52] 2025-10-13 00:40:45,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:41:52] 2025-10-13 00:40:45,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:41:52] 2025-10-13 00:40:45,368 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:41:52] 2025-10-13 00:40:45,368 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 18:41:52] 2025-10-13 00:40:45,368 | INFO     | sum of deviations: 7227393947.999997
[2025-10-12 18:41:52] 2025-10-13 00:40:45,369 | INFO     | mean x: 1760312661.5
[2025-10-12 18:41:52] 2025-10-13 00:40:45,369 | INFO     | mean y: 2308967.981818182
[2025-10-12 18:41:52] 2025-10-13 00:40:45,369 | INFO     | -- intersect: -30826088851.138844
[2025-10-12 18:41:52] 2025-10-13 00:40:45,369 | INFO     | intersect: -30826088851.138844
[2025-10-12 18:41:52] 2025-10-13 00:40:45,369 | INFO     | chi2: 1.3797888553605722
[2025-10-12 18:41:52] 2025-10-13 00:40:45,369 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 18:41:52] 2025-10-13 00:40:45,369 | INFO     | sum of deviations: 6908294163.999999
[2025-10-12 18:41:52] 2025-10-13 00:40:45,370 | INFO     | mean x: 1760312509.0
[2025-10-12 18:41:52] 2025-10-13 00:40:45,370 | INFO     | mean y: 2308062.180952381
[2025-10-12 18:41:52] 2025-10-13 00:40:45,370 | INFO     | -- intersect: -33878492968.14615
[2025-10-12 18:41:52] 2025-10-13 00:40:45,370 | INFO     | intersect: -33878492968.14615
[2025-10-12 18:41:52] 2025-10-13 00:40:45,370 | INFO     | chi2: 1.3824007368627598
[2025-10-12 18:41:52] 2025-10-13 00:40:45,370 | INFO     | current chi2=1.3824007368627598 (change=-0.18929573840521127 %)
[2025-10-12 18:41:52] 2025-10-13 00:40:45,370 | INFO     | right removable region: 104
[2025-10-12 18:41:52] 2025-10-13 00:40:45,370 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 18:41:52] 2025-10-13 00:40:45,371 | INFO     | sum of deviations: -5727013426.0
[2025-10-12 18:41:52] 2025-10-13 00:40:45,371 | INFO     | mean x: 1760312814.0
[2025-10-12 18:41:52] 2025-10-13 00:40:45,371 | INFO     | mean y: 2344719.495238095
[2025-10-12 18:41:52] 2025-10-13 00:40:45,371 | INFO     | -- intersect: 28089717867.994972
[2025-10-12 18:41:52] 2025-10-13 00:40:45,371 | INFO     | intersect: 28089717867.994972
[2025-10-12 18:41:52] 2025-10-13 00:40:45,371 | INFO     | chi2: 0.015490734013094472
[2025-10-12 18:41:52] 2025-10-13 00:40:45,371 | INFO     | current chi2=0.015490734013094472 (change=98.87731126737891 %)
[2025-10-12 18:41:52] 2025-10-13 00:40:45,371 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 18:41:52] 2025-10-13 00:40:45,371 | INFO     | sum of deviations: -4625374501.499999
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | mean x: 1760312966.5
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | mean y: 2341267.55
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | -- intersect: 26262769116.007263
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | intersect: 26262769116.007263
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | chi2: 0.01495191454575705
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | current chi2=0.01495191454575705 (change=3.478333995548256 %)
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | left removable region: 20
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | sum of square deviations: 183761585.0
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | sum of deviations: -2436774503.0000005
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | mean x: 1760313088.5
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | mean y: 2334106.5714285714
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | -- intersect: 23345004182.877007
[2025-10-12 18:41:52] 2025-10-13 00:40:45,372 | INFO     | intersect: 23345004182.877007
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | chi2: 0.01192129102342777
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | -- intersect: 23345004182.877007
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | current memory leak: -13.26 B/s (using 84 data points, chi2=0.01)
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | could have reported an average CPU frequency of 3983 MHz (7 samples)
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | ..............................
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | . Timing measurements:
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | . get job = 0 s
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | . initial setup = 2 s
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | . payload setup = 4 s
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | . stage-in = 0 s
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | . payload execution = 6696 s
[2025-10-12 18:41:52] 2025-10-13 00:40:45,373 | INFO     | . stage-out = 0 s
[2025-10-12 18:41:52] 2025-10-13 00:40:45,374 | INFO     | . log creation = 0 s
[2025-10-12 18:41:52] 2025-10-13 00:40:45,374 | INFO     | ..............................
[2025-10-12 18:41:52] 2025-10-13 00:40:45,515 | INFO     | time since job start (6730s) is within the limit (172800.0s)
[2025-10-12 18:41:52] 2025-10-13 00:40:45,596 | INFO     | 
[2025-10-12 18:41:52] 2025-10-13 00:40:45,596 | INFO     | job summary report
[2025-10-12 18:41:52] 2025-10-13 00:40:45,596 | INFO     | --------------------------------------------------
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | PanDA job id: 6840428586
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | task id: 46676269
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | errors: (none)
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | pilot state: finished 
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | transexitcode: 0
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | exeerrorcode: 0
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | exeerrordiag: 
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | exitcode: 0
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | exitmsg: OK
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | cpuconsumptiontime: 25762 s
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | nevents: 400
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | neventsw: 0
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | pid: 1302076
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | pgrp: 1302076
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | corecount: 4
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | event service: False
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | sizes: {0: 2348744, 1: 2348886, 4: 2349148, 11: 2349176, 6704: 2376438, 6705: 2385438, 6708: 2385622, 6716: 2385816}
[2025-10-12 18:41:52] 2025-10-13 00:40:45,597 | INFO     | --------------------------------------------------
[2025-10-12 18:41:52] 2025-10-13 00:40:45,598 | INFO     | 
[2025-10-12 18:41:52] 2025-10-13 00:40:45,598 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/2
[2025-10-12 18:41:52] 2025-10-13 00:40:45,615 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,616 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:41:52] 2025-10-13 00:40:45,617 | INFO     | job 6840428586 has completed (purged errors)
[2025-10-12 18:41:52] 2025-10-13 00:40:45,617 | INFO     | overall cleanup function is called
[2025-10-12 18:41:52] 2025-10-13 00:40:46,624 | INFO     | --- collectZombieJob: --- 10, [1302076]
[2025-10-12 18:41:52] 2025-10-13 00:40:46,624 | INFO     | zombie collector waiting for pid 1302076
[2025-10-12 18:41:52] 2025-10-13 00:40:46,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:41:52] 2025-10-13 00:40:46,625 | INFO     | collected zombie processes
[2025-10-12 18:41:52] 2025-10-13 00:40:46,625 | INFO     | will attempt to kill all subprocesses of pid=1302076
[2025-10-12 18:41:52] 2025-10-13 00:40:46,725 | INFO     | PID=1295427 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:41:52] 2025-10-13 00:40:46,725 | INFO     | .. there are 7 such processes running
[2025-10-12 18:41:52] 2025-10-13 00:40:46,815 | INFO     | process IDs to be killed: [1302076] (in reverse order)
[2025-10-12 18:41:52] 2025-10-13 00:40:46,894 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:41:52] 2025-10-13 00:40:46,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:41:52] 2025-10-13 00:40:46,898 | INFO     | did not find any defunct processes belonging to 1302076
[2025-10-12 18:41:52] 2025-10-13 00:40:46,902 | INFO     | did not find any defunct processes belonging to 1302076
[2025-10-12 18:41:52] 2025-10-13 00:40:46,902 | INFO     | ready for new job
[2025-10-12 18:41:52] 2025-10-13 00:40:46,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:41:52] 2025-10-13 00:40:46,904 | INFO     | ***************************************
[2025-10-12 18:41:52] 2025-10-13 00:40:46,904 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:41:52] 2025-10-13 00:40:46,904 | INFO     | ***************************************
[2025-10-12 18:41:52] 2025-10-13 00:40:46,904 | INFO     | 
[2025-10-12 18:41:52] 2025-10-13 00:40:46,906 | INFO     | architecture information:
[2025-10-12 18:41:52] 2025-10-13 00:40:46,906 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:41:52] 2025-10-13 00:40:46,916 | INFO     | cat /etc/os-release:
[2025-10-12 18:41:52] NAME="CentOS Linux"
[2025-10-12 18:41:52] VERSION="7 (Core)"
[2025-10-12 18:41:52] ID="centos"
[2025-10-12 18:41:52] ID_LIKE="rhel fedora"
[2025-10-12 18:41:52] VERSION_ID="7"
[2025-10-12 18:41:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:41:52] ANSI_COLOR="0;31"
[2025-10-12 18:41:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:41:52] HOME_URL="https://www.centos.org/"
[2025-10-12 18:41:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:41:52] 
[2025-10-12 18:41:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:41:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:41:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:41:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:41:52] 
[2025-10-12 18:41:52] 2025-10-13 00:40:46,916 | INFO     | ***************************************
[2025-10-12 18:41:52] 2025-10-13 00:40:47,419 | INFO     | executing command: df -mP /var/lib/boinc3/slots/2
[2025-10-12 18:41:52] 2025-10-13 00:40:47,435 | INFO     | sufficient remaining disk space (377223118848 B)
[2025-10-12 18:41:52] 2025-10-13 00:40:47,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:41:52] 2025-10-13 00:40:47,436 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:41:52] 2025-10-13 00:40:47,436 | INFO     | update_server=False
[2025-10-12 18:41:52] 2025-10-13 00:40:47,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:41:52] 2025-10-13 00:40:47,436 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 18:41:52] 2025-10-13 00:40:47,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:41:52] 2025-10-13 00:40:47,437 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:41:52] 2025-10-13 00:40:47,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:41:52] 2025-10-13 00:40:47,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:41:52] 2025-10-13 00:40:47,475 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 18:41:52] 2025-10-13 00:40:47,475 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 18:41:52] 2025-10-13 00:40:47,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:41:52] 2025-10-13 00:40:47,476 | INFO     | will abort loop
[2025-10-12 18:41:52] 2025-10-13 00:40:47,547 | INFO     | all payload control threads have been joined
[2025-10-12 18:41:52] 2025-10-13 00:40:47,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:41:52] 2025-10-13 00:40:47,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:41:52] 2025-10-13 00:40:48,189 | INFO     | all data control threads have been joined
[2025-10-12 18:41:52] 2025-10-13 00:40:48,433 | INFO     | all job control threads have been joined
[2025-10-12 18:41:52] 2025-10-13 00:40:48,442 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:48,443 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:48,479 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:48,552 | INFO     | [payload] control thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:48,800 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:49,195 | INFO     | [data] control thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:49,221 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:49,369 | INFO     | [job] validate thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:49,438 | INFO     | [job] control thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:49,458 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:49,504 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:49,618 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:49,662 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:49,795 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:51,696 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:40:58,274 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:41:52] 2025-10-13 00:40:59,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:41:52] 2025-10-13 00:41:46,355 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:41:52] 2025-10-13 00:41:46,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129362450995008)>', '<ExcThread(monitor, started 129362099681024)>']
[2025-10-12 18:41:52] 2025-10-13 00:41:47,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:41:52] 2025-10-13 00:41:47,734 | INFO     | [monitor] control thread has ended
[2025-10-12 18:41:52] 2025-10-13 00:41:51,831 | INFO     | all workflow threads have been joined
[2025-10-12 18:41:52] 2025-10-13 00:41:51,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:41:52] 2025-10-13 00:41:51,831 | INFO     | traces error code: 0
[2025-10-12 18:41:52] 2025-10-13 00:41:51,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:41:52] 2025-10-13 00:41:51,932 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:41:52] 2025-10-13 00:41:51,934 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:41:52] 2025-10-13 00:41:51,937 [wrapper] pilotpid: 1295427
[2025-10-12 18:41:52] 2025-10-13 00:41:51,939 [wrapper] Pilot exit status: 0
[2025-10-12 18:41:52] 2025-10-13 00:41:51,947 [wrapper] pandaids: 6840428586
[2025-10-12 18:41:52] 2025-10-13 00:41:51,990 [wrapper] cleanup supervisor_pilot 1467716 1295428
[2025-10-12 18:41:52] 2025-10-13 00:41:51,994 [wrapper] Test setup, not cleaning
[2025-10-12 18:41:52] 2025-10-13 00:41:51,996 [wrapper] apfmon messages muted
[2025-10-12 18:41:52] 2025-10-13 00:41:51,998 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:41:52] 2025-10-13 00:41:52,001 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:41:52]  *** Error codes and diagnostics ***
[2025-10-12 18:41:52]     "exeErrorCode": 0,
[2025-10-12 18:41:52]     "exeErrorDiag": "",
[2025-10-12 18:41:52]     "pilotErrorCode": 0,
[2025-10-12 18:41:52]     "pilotErrorDiag": "",
[2025-10-12 18:41:52]  *** Listing of results directory ***
[2025-10-12 18:41:52] total 413192
[2025-10-12 18:41:52] -rw-r--r-- 1 boinc boinc    557409 Oct 12 10:49 pilot3.tar.gz
[2025-10-12 18:41:52] -rw-r--r-- 1 boinc boinc      5112 Oct 12 10:57 queuedata.json
[2025-10-12 18:41:52] -rwx------ 1 boinc boinc     36292 Oct 12 10:58 runpilot2-wrapper.sh
[2025-10-12 18:41:52] -rw-rw-r-- 1 boinc boinc       100 Oct 12 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:41:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 16:48 run_atlas
[2025-10-12 18:41:52] -rw-rw-r-- 1 boinc boinc       105 Oct 12 16:48 job.xml
[2025-10-12 18:41:52] -rw-r--r-- 2 boinc boinc 222122452 Oct 12 16:48 EVNT.46676267._004792.pool.root.1
[2025-10-12 18:41:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:48 start_atlas.sh
[2025-10-12 18:41:52] drwxrwx--x 2 boinc boinc      4096 Oct 12 16:48 shared
[2025-10-12 18:41:52] -rw-r--r-- 2 boinc boinc    569680 Oct 12 16:48 input.tar.gz
[2025-10-12 18:41:52] -rw-rw-r-- 1 boinc boinc      9753 Oct 12 16:48 init_data.xml
[2025-10-12 18:41:52] -rw-rw-r-- 1 boinc boinc         0 Oct 12 16:48 boinc_lockfile
[2025-10-12 18:41:52] -rw-rw-r-- 1 boinc boinc      2550 Oct 12 16:48 pandaJob.out
[2025-10-12 18:41:52] -rw------- 1 boinc boinc    975603 Oct 12 16:48 agis_schedconf.cvmfs.json
[2025-10-12 18:41:52] -rw------- 1 boinc boinc   1560580 Oct 12 16:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:41:52] drwx------ 5 boinc boinc      4096 Oct 12 16:48 pilot3
[2025-10-12 18:41:52] -rw------- 1 boinc boinc        95 Oct 12 18:40 pilot_heartbeat.json
[2025-10-12 18:41:52] -rw------- 1 boinc boinc 194513334 Oct 12 18:40 HITS.46676269._084188.pool.root.1
[2025-10-12 18:41:52] -rw-rw-r-- 1 boinc boinc       529 Oct 12 18:40 boinc_task_state.xml
[2025-10-12 18:41:52] -rw------- 1 boinc boinc      1025 Oct 12 18:40 memory_monitor_summary.json
[2025-10-12 18:41:52] -rw------- 1 boinc boinc    298766 Oct 12 18:40 log.46676269._084188.job.log.tgz.1
[2025-10-12 18:41:52] -rw------- 1 boinc boinc      7781 Oct 12 18:40 heartbeat.json
[2025-10-12 18:41:52] -rw-rw-r-- 1 boinc boinc      8192 Oct 12 18:41 boinc_mmap_file
[2025-10-12 18:41:52] -rw-rw-r-- 1 boinc boinc        27 Oct 12 18:41 wrapper_checkpoint.txt
[2025-10-12 18:41:52] -rw------- 1 boinc boinc      4812 Oct 12 18:41 pilotlog.txt
[2025-10-12 18:41:52] -rw------- 1 boinc boinc    983035 Oct 12 18:41 log.46676269._084188.job.log.1
[2025-10-12 18:41:52] -rw------- 1 boinc boinc       357 Oct 12 18:41 output.list
[2025-10-12 18:41:52] -rw-rw-r-- 1 boinc boinc       620 Oct 12 18:41 runtime_log
[2025-10-12 18:41:52] -rw------- 1 boinc boinc   1300480 Oct 12 18:41 result.tar.gz
[2025-10-12 18:41:52] -rw-rw-r-- 1 boinc boinc      8755 Oct 12 18:41 runtime_log.err
[2025-10-12 18:41:52] -rw------- 1 boinc boinc       657 Oct 12 18:41 ICLKDmDaES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmHUUMDmv8FDlm.diag
[2025-10-12 18:41:52] -rw-rw-r-- 1 boinc boinc     21214 Oct 12 18:41 stderr.txt
[2025-10-12 18:41:52] HITS file was successfully produced:
[2025-10-12 18:41:52] -rw------- 1 boinc boinc 194513334 Oct 12 18:40 shared/HITS.pool.root.1
[2025-10-12 18:41:52]  *** Contents of shared directory: ***
[2025-10-12 18:41:52] total 408732
[2025-10-12 18:41:52] -rw-r--r-- 2 boinc boinc 222122452 Oct 12 16:48 ATLAS.root_0
[2025-10-12 18:41:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:48 start_atlas.sh
[2025-10-12 18:41:52] -rw-r--r-- 2 boinc boinc    569680 Oct 12 16:48 input.tar.gz
[2025-10-12 18:41:52] -rw------- 1 boinc boinc 194513334 Oct 12 18:40 HITS.pool.root.1
[2025-10-12 18:41:52] -rw------- 1 boinc boinc   1300480 Oct 12 18:41 result.tar.gz
18:41:53 (1291597): run_atlas exited; CPU time 25821.907641
18:41:53 (1291597): called boinc_finish(0)

</stderr_txt>
]]>

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