Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:36:42 (4107598): wrapper (7.7.26015): starting
18:36:42 (4107598): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 18:36:42] Arguments: --nthreads 10
[2025-10-12 18:36:42] Threads: 10
[2025-10-12 18:36:42] Checking for CVMFS
[2025-10-12 18:36:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:36:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:36:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:37:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:37:04] 2.13.2.0 342865 27870 118640 151640 3 327 25360943 40960000 30661 16776704 0 208126211 99.774 117219177 46636 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:37:04] CVMFS is ok
[2025-10-12 18:37:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:37:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:37:04] Further information can be found at the LHC@home message board.
[2025-10-12 18:37:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:37:04] Checking for apptainer binary...
[2025-10-12 18:37:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:37:04] Running /usr/bin/apptainer --version
[2025-10-12 18:37:04] apptainer version 1.4.3-1.el9
[2025-10-12 18:37:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:37:05] c-208-36.aglt2.org
[2025-10-12 18:37:05] apptainer works
[2025-10-12 18:37:05] Set ATHENA_PROC_NUMBER=10
[2025-10-12 18:37:05] Set ATHENA_CORE_NUMBER=10
[2025-10-12 18:37:05] Starting ATLAS job with PandaID=6840537432
[2025-10-12 18:37:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:43:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:43:27] 2025-10-12 23:42:25,942 | INFO     | .. there are 33 such processes running
[2025-10-12 19:43:27] 2025-10-12 23:42:26,943 | INFO     | time since job start (3862s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:27,673 | INFO     | monitor loop #270: job 0:6840537432 is in state 'finished'
[2025-10-12 19:43:27] 2025-10-12 23:42:27,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:43:27] 2025-10-12 23:42:28,950 | INFO     | time since job start (3864s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:30,178 | INFO     | monitor loop #271: job 0:6840537432 is in state 'finished'
[2025-10-12 19:43:27] 2025-10-12 23:42:30,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:43:27] 2025-10-12 23:42:30,957 | INFO     | time since job start (3866s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:32,684 | INFO     | monitor loop #272: job 0:6840537432 is in state 'finished'
[2025-10-12 19:43:27] 2025-10-12 23:42:32,685 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:43:27] 2025-10-12 23:42:32,966 | INFO     | time since job start (3868s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:34,973 | INFO     | time since job start (3870s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:35,190 | INFO     | monitor loop #273: job 0:6840537432 is in state 'finished'
[2025-10-12 19:43:27] 2025-10-12 23:42:35,191 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:43:27] 2025-10-12 23:42:36,980 | INFO     | time since job start (3872s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:37,695 | INFO     | monitor loop #274: job 0:6840537432 is in state 'finished'
[2025-10-12 19:43:27] 2025-10-12 23:42:37,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:43:27] 2025-10-12 23:42:38,988 | INFO     | time since job start (3874s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:40,200 | INFO     | monitor loop #275: job 0:6840537432 is in state 'finished'
[2025-10-12 19:43:27] 2025-10-12 23:42:40,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:43:27] 2025-10-12 23:42:40,995 | INFO     | time since job start (3876s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:42,706 | INFO     | monitor loop #276: job 0:6840537432 is in state 'finished'
[2025-10-12 19:43:27] 2025-10-12 23:42:42,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:43:27] 2025-10-12 23:42:43,009 | INFO     | time since job start (3879s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:43,009 | INFO     | 3881s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 19:43:27] 2025-10-12 23:42:45,015 | INFO     | time since job start (3881s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:45,213 | INFO     | monitor loop #277: job 0:6840537432 is in state 'finished'
[2025-10-12 19:43:27] 2025-10-12 23:42:45,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:43:27] 2025-10-12 23:42:47,037 | INFO     | time since job start (3883s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:47,718 | INFO     | monitor loop #278: job 0:6840537432 is in state 'finished'
[2025-10-12 19:43:27] 2025-10-12 23:42:47,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:43:27] 2025-10-12 23:42:50,200 | INFO     | PID=4126751 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:43:27] 2025-10-12 23:42:50,200 | INFO     | .. there are 33 such processes running
[2025-10-12 19:43:27] 2025-10-12 23:42:50,226 | INFO     | monitor loop #279: job 0:6840537432 is in state 'finished'
[2025-10-12 19:43:27] 2025-10-12 23:42:50,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:43:27] 2025-10-12 23:42:51,200 | INFO     | time since job start (3887s) is within the limit (172800.0s)
[2025-10-12 19:43:27] 2025-10-12 23:42:52,263 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 19:43:27] 2025-10-12 23:42:52,284 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.009601562498
[2025-10-12 19:43:27] 2025-10-12 23:42:52,334 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840537432/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:43:27] 2025-10-12 23:42:52,334 | INFO     | extracted standard info from prmon json
[2025-10-12 19:43:27] 2025-10-12 23:42:52,335 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:43:27] 2025-10-12 23:42:52,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:43:27] 2025-10-12 23:42:52,335 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:43:27] 2025-10-12 23:42:52,335 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:43:27] 2025-10-12 23:42:52,336 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:43:27] 2025-10-12 23:42:52,336 | INFO     | sum of square deviations: 51573558.54545458
[2025-10-12 19:43:27] 2025-10-12 23:42:52,336 | INFO     | sum of deviations: -644316469.4545455
[2025-10-12 19:43:27] 2025-10-12 23:42:52,336 | INFO     | mean x: 1760310723.090909
[2025-10-12 19:43:27] 2025-10-12 23:42:52,336 | INFO     | mean y: 2657082.290909091
[2025-10-12 19:43:27] 2025-10-12 23:42:52,336 | INFO     | -- intersect: 21994492089.085777
[2025-10-12 19:43:27] 2025-10-12 23:42:52,336 | INFO     | intersect: 21994492089.085777
[2025-10-12 19:43:27] 2025-10-12 23:42:52,336 | INFO     | chi2: 0.13957453318512753
[2025-10-12 19:43:27] 2025-10-12 23:42:52,336 | INFO     | -- intersect: 21994492089.085777
[2025-10-12 19:43:27] 2025-10-12 23:42:52,340 | INFO     | current memory leak: -12.49 B/s (using 55 data points, chi2=0.14)
[2025-10-12 19:43:27] 2025-10-12 23:42:52,341 | INFO     | could have reported an average CPU frequency of 3778 MHz (6 samples)
[2025-10-12 19:43:27] 2025-10-12 23:42:52,341 | INFO     | ..............................
[2025-10-12 19:43:27] 2025-10-12 23:42:52,341 | INFO     | . Timing measurements:
[2025-10-12 19:43:27] 2025-10-12 23:42:52,341 | INFO     | . get job = 0 s
[2025-10-12 19:43:27] 2025-10-12 23:42:52,341 | INFO     | . initial setup = 2 s
[2025-10-12 19:43:27] 2025-10-12 23:42:52,341 | INFO     | . payload setup = 21 s
[2025-10-12 19:43:27] 2025-10-12 23:42:52,341 | INFO     | . stage-in = 0 s
[2025-10-12 19:43:27] 2025-10-12 23:42:52,341 | INFO     | . payload execution = 3768 s
[2025-10-12 19:43:27] 2025-10-12 23:42:52,341 | INFO     | . stage-out = 2 s
[2025-10-12 19:43:27] 2025-10-12 23:42:52,341 | INFO     | . log creation = 0 s
[2025-10-12 19:43:27] 2025-10-12 23:42:52,341 | INFO     | ..............................
[2025-10-12 19:43:27] 2025-10-12 23:42:52,444 | INFO     | 
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | job summary report
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | --------------------------------------------------
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | PanDA job id: 6840537432
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | task id: 46676269
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | errors: (none)
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | pilot state: finished 
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | transexitcode: 0
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | exeerrorcode: 0
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | exeerrordiag: 
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | exitcode: 0
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | exitmsg: OK
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | cpuconsumptiontime: 23494 s
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | nevents: 400
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | neventsw: 0
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | pid: 4145279
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | pgrp: 4145279
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | corecount: 10
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | event service: False
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | sizes: {0: 2348684, 1: 2348883, 11: 2348883, 22: 2348911, 25: 2349201, 33: 2349229, 3795: 2375401, 3799: 2384399, 3801: 2384455, 3835: 2384649}
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | --------------------------------------------------
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | 
[2025-10-12 19:43:27] 2025-10-12 23:42:52,445 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,561 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:43:27] 2025-10-12 23:42:52,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,561 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:43:27] 2025-10-12 23:42:52,561 | INFO     | job 6840537432 has completed (purged errors)
[2025-10-12 19:43:27] 2025-10-12 23:42:52,561 | INFO     | overall cleanup function is called
[2025-10-12 19:43:27] 2025-10-12 23:42:53,594 | INFO     | --- collectZombieJob: --- 10, [4145279]
[2025-10-12 19:43:27] 2025-10-12 23:42:53,595 | INFO     | zombie collector waiting for pid 4145279
[2025-10-12 19:43:27] 2025-10-12 23:42:53,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:43:27] 2025-10-12 23:42:53,595 | INFO     | collected zombie processes
[2025-10-12 19:43:27] 2025-10-12 23:42:53,595 | INFO     | will attempt to kill all subprocesses of pid=4145279
[2025-10-12 19:43:27] 2025-10-12 23:42:54,607 | INFO     | process IDs to be killed: [4145279] (in reverse order)
[2025-10-12 19:43:27] 2025-10-12 23:42:55,838 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:43:27] 2025-10-12 23:42:55,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:43:27] 2025-10-12 23:42:55,863 | INFO     | did not find any defunct processes belonging to 4145279
[2025-10-12 19:43:27] 2025-10-12 23:42:55,895 | INFO     | did not find any defunct processes belonging to 4145279
[2025-10-12 19:43:27] 2025-10-12 23:42:55,896 | INFO     | ready for new job
[2025-10-12 19:43:27] 2025-10-12 23:42:55,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:43:27] 2025-10-12 23:42:55,898 | INFO     | ***************************************
[2025-10-12 19:43:27] 2025-10-12 23:42:55,898 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:43:27] 2025-10-12 23:42:55,898 | INFO     | ***************************************
[2025-10-12 19:43:27] 2025-10-12 23:42:55,898 | INFO     | 
[2025-10-12 19:43:27] 2025-10-12 23:42:55,903 | INFO     | architecture information:
[2025-10-12 19:43:27] 2025-10-12 23:42:55,906 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:43:27] 2025-10-12 23:42:55,960 | INFO     | cat /etc/os-release:
[2025-10-12 19:43:27] NAME="CentOS Linux"
[2025-10-12 19:43:27] VERSION="7 (Core)"
[2025-10-12 19:43:27] ID="centos"
[2025-10-12 19:43:27] ID_LIKE="rhel fedora"
[2025-10-12 19:43:27] VERSION_ID="7"
[2025-10-12 19:43:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:43:27] ANSI_COLOR="0;31"
[2025-10-12 19:43:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:43:27] HOME_URL="https://www.centos.org/"
[2025-10-12 19:43:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:43:27] 
[2025-10-12 19:43:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:43:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:43:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:43:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:43:27] 
[2025-10-12 19:43:27] 2025-10-12 23:42:55,961 | INFO     | ***************************************
[2025-10-12 19:43:27] 2025-10-12 23:42:56,464 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 19:43:27] 2025-10-12 23:42:56,542 | INFO     | sufficient remaining disk space (170296082432 B)
[2025-10-12 19:43:27] 2025-10-12 23:42:56,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:43:27] 2025-10-12 23:42:56,543 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:43:27] 2025-10-12 23:42:56,543 | INFO     | update_server=False
[2025-10-12 19:43:27] 2025-10-12 23:42:56,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:43:27] 2025-10-12 23:42:56,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:43:27] 2025-10-12 23:42:56,543 | INFO     | aborting loop
[2025-10-12 19:43:27] 2025-10-12 23:42:56,691 | INFO     | all data control threads have been joined
[2025-10-12 19:43:27] 2025-10-12 23:42:57,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:43:27] 2025-10-12 23:42:57,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:43:27] 2025-10-12 23:42:57,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:43:27] 2025-10-12 23:42:57,498 | INFO     | all job control threads have been joined
[2025-10-12 19:43:27] 2025-10-12 23:42:57,548 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:57,549 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:57,551 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:57,697 | INFO     | [data] control thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:57,874 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:57,875 | INFO     | [job] validate thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:57,892 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:58,033 | INFO     | all payload control threads have been joined
[2025-10-12 19:43:27] 2025-10-12 23:42:58,411 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:58,462 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:58,479 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:58,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:58,504 | INFO     | [job] control thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:59,039 | INFO     | [payload] control thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:59,069 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:42:59,156 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:43:01,051 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:43:27] 2025-10-12 23:43:10,866 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:43:27] 2025-10-12 23:43:12,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140239586371392)>', '<ExcThread(monitor, started 140238869493504)>']
[2025-10-12 19:43:27] 2025-10-12 23:43:17,146 | INFO     | all workflow threads have been joined
[2025-10-12 19:43:27] 2025-10-12 23:43:17,147 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:43:27] 2025-10-12 23:43:17,147 | INFO     | traces error code: 0
[2025-10-12 19:43:27] 2025-10-12 23:43:17,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:43:27] 2025-10-12 23:43:26,448 | INFO     | PID=4126751 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:43:27] 2025-10-12 23:43:26,448 | INFO     | .. there are 33 such processes running
[2025-10-12 19:43:27] 2025-10-12 23:43:26,449 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:43:27] 2025-10-12 23:43:26,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:43:27] 2025-10-12 23:43:26,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:43:27] 2025-10-12 23:43:26,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:43:27] 2025-10-12 23:43:26,449 | INFO     | [monitor] control thread has ended
[2025-10-12 19:43:27] 2025-10-12 23:43:26,652 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:43:27] 2025-10-12 23:43:26,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:43:27] 2025-10-12 23:43:26,696 [wrapper] pilotpid: 4126751
[2025-10-12 19:43:27] 2025-10-12 23:43:26,717 [wrapper] Pilot exit status: 0
[2025-10-12 19:43:27] 2025-10-12 23:43:26,844 [wrapper] pandaids: 6840537432
[2025-10-12 19:43:27] 2025-10-12 23:43:27,146 [wrapper] cleanup supervisor_pilot  310772 4126752
[2025-10-12 19:43:27] 2025-10-12 23:43:27,168 [wrapper] Test setup, not cleaning
[2025-10-12 19:43:27] 2025-10-12 23:43:27,176 [wrapper] apfmon messages muted
[2025-10-12 19:43:27] 2025-10-12 23:43:27,215 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:43:27] 2025-10-12 23:43:27,244 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:43:27]  *** Error codes and diagnostics ***
[2025-10-12 19:43:27]     "exeErrorCode": 0,
[2025-10-12 19:43:27]     "exeErrorDiag": "",
[2025-10-12 19:43:27]     "pilotErrorCode": 0,
[2025-10-12 19:43:27]     "pilotErrorDiag": "",
[2025-10-12 19:43:27]  *** Listing of results directory ***
[2025-10-12 19:43:27] total 409012
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-12 19:43:27] -rwx------. 1 boincer umatlas     36292 Oct 12 14:50 runpilot2-wrapper.sh
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:50 queuedata.json
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:43:27] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:36 run_atlas
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:36 job.xml
[2025-10-12 19:43:27] -rw-r--r--. 2 boincer umatlas 222348073 Oct 12 18:36 EVNT.46676267._004423.pool.root.1
[2025-10-12 19:43:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:36 start_atlas.sh
[2025-10-12 19:43:27] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:36 shared
[2025-10-12 19:43:27] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 18:36 input.tar.gz
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:36 boinc_lockfile
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 18:37 pandaJob.out
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas    975603 Oct 12 18:38 agis_schedconf.cvmfs.json
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:43:27] drwx------. 5 boincer umatlas      4096 Oct 12 18:38 pilot3
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas      7174 Oct 12 19:41 init_data.xml
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas 190798357 Oct 12 19:41 HITS.46676269._086579.pool.root.1
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas       529 Oct 12 19:41 boinc_task_state.xml
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas      1057 Oct 12 19:42 memory_monitor_summary.json
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas    332361 Oct 12 19:42 log.46676269._086579.job.log.tgz.1
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas      7803 Oct 12 19:42 heartbeat.json
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 19:43 boinc_mmap_file
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas        27 Oct 12 19:43 wrapper_checkpoint.txt
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas       823 Oct 12 19:43 pilotlog.txt
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas        95 Oct 12 19:43 pilot_heartbeat.json
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas    556476 Oct 12 19:43 log.46676269._086579.job.log.1
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas       357 Oct 12 19:43 output.list
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas       620 Oct 12 19:43 runtime_log
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas    911360 Oct 12 19:43 result.tar.gz
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 19:43 runtime_log.err
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas       656 Oct 12 19:43 jpXNDmYKGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjhUMDmz58Y2m.diag
[2025-10-12 19:43:27] -rw-r--r--. 1 boincer umatlas     22349 Oct 12 19:43 stderr.txt
[2025-10-12 19:43:27] HITS file was successfully produced:
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas 190798357 Oct 12 19:41 shared/HITS.pool.root.1
[2025-10-12 19:43:27]  *** Contents of shared directory: ***
[2025-10-12 19:43:27] total 404940
[2025-10-12 19:43:27] -rw-r--r--. 2 boincer umatlas 222348073 Oct 12 18:36 ATLAS.root_0
[2025-10-12 19:43:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:36 start_atlas.sh
[2025-10-12 19:43:27] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 18:36 input.tar.gz
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas 190798357 Oct 12 19:41 HITS.pool.root.1
[2025-10-12 19:43:27] -rw-------. 1 boincer umatlas    911360 Oct 12 19:43 result.tar.gz
19:43:29 (4107598): run_atlas exited; CPU time 23601.036588
19:43:29 (4107598): called boinc_finish(0)

</stderr_txt>
]]>

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