Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:49:30 (33444): wrapper (7.7.26015): starting
09:49:30 (33444): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 09:49:30] Arguments: --nthreads 3
[2025-10-13 09:49:30] Threads: 3
[2025-10-13 09:49:30] Checking for CVMFS
[2025-10-13 09:49:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:49:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:49:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:49:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:49:31] 2.9.2.0 2646070 5568 71808 151653 2 57 29080145 36864001 0 130560 0 4137900 99.991 187893 898 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 09:49:31] CVMFS is ok
[2025-10-13 09:49:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:49:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:49:31] Further information can be found at the LHC@home message board.
[2025-10-13 09:49:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:49:31] Checking for apptainer binary...
[2025-10-13 09:49:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:49:31] Running /usr/bin/apptainer --version
[2025-10-13 09:49:31] apptainer version 1.4.1-1.1
[2025-10-13 09:49:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:49:31] cosA133a
[2025-10-13 09:49:31] apptainer works
[2025-10-13 09:49:31] Set ATHENA_PROC_NUMBER=3
[2025-10-13 09:49:31] Set ATHENA_CORE_NUMBER=3
[2025-10-13 09:49:31] Starting ATLAS job with PandaID=6840537557
[2025-10-13 09:49:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:23:56]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:23:56]  storage_token=
[2025-10-13 11:23:56]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840537557/log.46676269._086704.job.log.tgz.1
[2025-10-13 11:23:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/7c/log.46676269._086704.job.log.tgz.1
[2025-10-13 11:23:56]  workdir=None
[2025-10-13 11:23:56] ]
[2025-10-13 11:23:56] 2025-10-13 09:22:53,961 | INFO     | transferring file log.46676269._086704.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840537557/log.46676269._086704.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 11:23:56] 2025-10-13 09:22:53,961 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840537557/log.46676269._086704.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0867
[2025-10-13 11:23:56] 2025-10-13 09:22:53,974 | INFO     | adding to output.list: log.46676269._086704.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/7c/log.46676269._086704.job.log.tg
[2025-10-13 11:23:56] 2025-10-13 09:22:53,974 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 11:23:56] 2025-10-13 09:22:53,974 | INFO     | summary of transferred files:
[2025-10-13 11:23:56] 2025-10-13 09:22:53,974 | INFO     |  -- lfn=log.46676269._086704.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 11:23:56] 2025-10-13 09:22:53,975 | INFO     | stage-out finished correctly
[2025-10-13 11:23:56] 2025-10-13 09:22:55,372 | INFO     | monitor loop #431: job 0:6840537557 is in state 'finished'
[2025-10-13 11:23:56] 2025-10-13 09:22:55,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:23:56] 2025-10-13 09:22:55,394 | INFO     | time since job start (5594s) is within the limit (172800.0s)
[2025-10-13 11:23:56] 2025-10-13 09:22:56,446 | INFO     | PID=37173 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 11:23:56] 2025-10-13 09:22:56,465 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 11:23:56] 2025-10-13 09:22:57,447 | INFO     | time since job start (5596s) is within the limit (172800.0s)
[2025-10-13 11:23:56] 2025-10-13 09:22:57,876 | INFO     | monitor loop #432: job 0:6840537557 is in state 'finished'
[2025-10-13 11:23:56] 2025-10-13 09:22:57,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:23:56] 2025-10-13 09:22:59,453 | INFO     | time since job start (5598s) is within the limit (172800.0s)
[2025-10-13 11:23:56] 2025-10-13 09:22:59,489 | INFO     | job 6840537557 has state=finished
[2025-10-13 11:23:56] 2025-10-13 09:22:59,489 | INFO     | preparing for final server update for job 6840537557 in state='finished'
[2025-10-13 11:23:56] 2025-10-13 09:22:59,490 | INFO     | this job has now completed (state=finished)
[2025-10-13 11:23:56] 2025-10-13 09:22:59,490 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 11:23:56] 2025-10-13 09:22:59,491 | INFO     | log transfer has been attempted: DONE
[2025-10-13 11:23:56] 2025-10-13 09:22:59,491 | INFO     | job 6840537557 has finished - writing final server update
[2025-10-13 11:23:56] 2025-10-13 09:22:59,491 | INFO     | total number of processed events: 400 (read)
[2025-10-13 11:23:56] 2025-10-13 09:22:59,493 | INFO     | executing command: lscpu
[2025-10-13 11:23:56] 2025-10-13 09:22:59,509 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 11:23:56] 2025-10-13 09:23:00,381 | INFO     | monitor loop #433: job 0:6840537557 is in state 'finished'
[2025-10-13 11:23:56] 2025-10-13 09:23:00,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:23:56] 2025-10-13 09:23:01,459 | INFO     | time since job start (5600s) is within the limit (172800.0s)
[2025-10-13 11:23:56] 2025-10-13 09:23:02,883 | INFO     | monitor loop #434: job 0:6840537557 is in state 'finished'
[2025-10-13 11:23:56] 2025-10-13 09:23:02,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:23:56] 2025-10-13 09:23:03,465 | INFO     | time since job start (5602s) is within the limit (172800.0s)
[2025-10-13 11:23:56] 2025-10-13 09:23:04,566 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 11:23:56] 2025-10-13 09:23:04,567 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4336.679833333333
[2025-10-13 11:23:56] 2025-10-13 09:23:04,568 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840537557/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:23:56] 2025-10-13 09:23:04,568 | INFO     | extracted standard info from prmon json
[2025-10-13 11:23:56] 2025-10-13 09:23:04,568 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:23:56] 2025-10-13 09:23:04,568 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:23:56] 2025-10-13 09:23:04,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:23:56] 2025-10-13 09:23:04,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:23:56] 2025-10-13 09:23:04,569 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:23:56] 2025-10-13 09:23:04,569 | INFO     | sum of square deviations: 190403570.0
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | sum of deviations: -9143117309.0
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | mean x: 1760344674.0
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | mean y: 2407960.2705882355
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | -- intersect: 84533584863.38937
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | intersect: 84533584863.38937
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | chi2: 0.08504172298179713
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | -- intersect: 84533584863.38937
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | current memory leak: -48.02 B/s (using 85 data points, chi2=0.09)
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | could have reported an average CPU frequency of 4278 MHz (7 samples)
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | ..............................
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | . Timing measurements:
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | . get job = 0 s
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | . initial setup = 1 s
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | . payload setup = 5 s
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | . stage-in = 0 s
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | . payload execution = 5565 s
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | . stage-out = 0 s
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | . log creation = 0 s
[2025-10-13 11:23:56] 2025-10-13 09:23:04,570 | INFO     | ..............................
[2025-10-13 11:23:56] 2025-10-13 09:23:04,966 | INFO     | 
[2025-10-13 11:23:56] 2025-10-13 09:23:04,967 | INFO     | job summary report
[2025-10-13 11:23:56] 2025-10-13 09:23:04,967 | INFO     | --------------------------------------------------
[2025-10-13 11:23:56] 2025-10-13 09:23:04,967 | INFO     | PanDA job id: 6840537557
[2025-10-13 11:23:56] 2025-10-13 09:23:04,967 | INFO     | task id: 46676269
[2025-10-13 11:23:56] 2025-10-13 09:23:04,967 | INFO     | errors: (none)
[2025-10-13 11:23:56] 2025-10-13 09:23:04,967 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:23:56] 2025-10-13 09:23:04,967 | INFO     | pilot state: finished 
[2025-10-13 11:23:56] 2025-10-13 09:23:04,968 | INFO     | transexitcode: 0
[2025-10-13 11:23:56] 2025-10-13 09:23:04,968 | INFO     | exeerrorcode: 0
[2025-10-13 11:23:56] 2025-10-13 09:23:04,968 | INFO     | exeerrordiag: 
[2025-10-13 11:23:56] 2025-10-13 09:23:04,968 | INFO     | exitcode: 0
[2025-10-13 11:23:56] 2025-10-13 09:23:04,968 | INFO     | exitmsg: OK
[2025-10-13 11:23:56] 2025-10-13 09:23:04,968 | INFO     | cpuconsumptiontime: 15997 s
[2025-10-13 11:23:56] 2025-10-13 09:23:04,968 | INFO     | nevents: 400
[2025-10-13 11:23:56] 2025-10-13 09:23:04,969 | INFO     | neventsw: 0
[2025-10-13 11:23:56] 2025-10-13 09:23:04,969 | INFO     | pid: 43618
[2025-10-13 11:23:56] 2025-10-13 09:23:04,969 | INFO     | pgrp: 43618
[2025-10-13 11:23:56] 2025-10-13 09:23:04,969 | INFO     | corecount: 3
[2025-10-13 11:23:56] 2025-10-13 09:23:04,969 | INFO     | event service: False
[2025-10-13 11:23:56] 2025-10-13 09:23:04,969 | INFO     | sizes: {0: 2348857, 5: 2349119, 10: 2349175, 5575: 2375854, 5576: 2384858, 5578: 2384914, 5586: 2385236}
[2025-10-13 11:23:56] 2025-10-13 09:23:04,969 | INFO     | --------------------------------------------------
[2025-10-13 11:23:56] 2025-10-13 09:23:04,969 | INFO     | 
[2025-10-13 11:23:56] 2025-10-13 09:23:04,970 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 11:23:56] 2025-10-13 09:23:04,983 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,983 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,983 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,983 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | job 6840537557 has completed (purged errors)
[2025-10-13 11:23:56] 2025-10-13 09:23:04,984 | INFO     | overall cleanup function is called
[2025-10-13 11:23:56] 2025-10-13 09:23:05,990 | INFO     | --- collectZombieJob: --- 10, [43618]
[2025-10-13 11:23:56] 2025-10-13 09:23:05,991 | INFO     | zombie collector waiting for pid 43618
[2025-10-13 11:23:56] 2025-10-13 09:23:05,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:23:56] 2025-10-13 09:23:05,991 | INFO     | collected zombie processes
[2025-10-13 11:23:56] 2025-10-13 09:23:05,991 | INFO     | will attempt to kill all subprocesses of pid=43618
[2025-10-13 11:23:56] 2025-10-13 09:23:06,029 | INFO     | process IDs to be killed: [43618] (in reverse order)
[2025-10-13 11:23:56] 2025-10-13 09:23:06,054 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:23:56] 2025-10-13 09:23:06,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:23:56] 2025-10-13 09:23:06,055 | INFO     | did not find any defunct processes belonging to 43618
[2025-10-13 11:23:56] 2025-10-13 09:23:06,056 | INFO     | did not find any defunct processes belonging to 43618
[2025-10-13 11:23:56] 2025-10-13 09:23:06,056 | INFO     | ready for new job
[2025-10-13 11:23:56] 2025-10-13 09:23:06,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:23:56] 2025-10-13 09:23:06,057 | INFO     | ***************************************
[2025-10-13 11:23:56] 2025-10-13 09:23:06,057 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 11:23:56] 2025-10-13 09:23:06,057 | INFO     | ***************************************
[2025-10-13 11:23:56] 2025-10-13 09:23:06,057 | INFO     | 
[2025-10-13 11:23:56] 2025-10-13 09:23:06,057 | INFO     | architecture information:
[2025-10-13 11:23:56] 2025-10-13 09:23:06,058 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:23:56] 2025-10-13 09:23:06,067 | INFO     | cat /etc/os-release:
[2025-10-13 11:23:56] NAME="CentOS Linux"
[2025-10-13 11:23:56] VERSION="7 (Core)"
[2025-10-13 11:23:56] ID="centos"
[2025-10-13 11:23:56] ID_LIKE="rhel fedora"
[2025-10-13 11:23:56] VERSION_ID="7"
[2025-10-13 11:23:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:23:56] ANSI_COLOR="0;31"
[2025-10-13 11:23:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:23:56] HOME_URL="https://www.centos.org/"
[2025-10-13 11:23:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:23:56] 
[2025-10-13 11:23:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:23:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:23:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:23:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:23:56] 
[2025-10-13 11:23:56] 2025-10-13 09:23:06,067 | INFO     | ***************************************
[2025-10-13 11:23:56] 2025-10-13 09:23:06,571 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 11:23:56] 2025-10-13 09:23:06,583 | INFO     | sufficient remaining disk space (330975674368 B)
[2025-10-13 11:23:56] 2025-10-13 09:23:06,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:23:56] 2025-10-13 09:23:06,584 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:23:56] 2025-10-13 09:23:06,584 | INFO     | update_server=False
[2025-10-13 11:23:56] 2025-10-13 09:23:06,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:23:56] 2025-10-13 09:23:06,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:23:56] 2025-10-13 09:23:06,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:23:56] 2025-10-13 09:23:06,584 | INFO     | aborting loop
[2025-10-13 11:23:56] 2025-10-13 09:23:06,802 | INFO     | all payload control threads have been joined
[2025-10-13 11:23:56] 2025-10-13 09:23:06,998 | INFO     | all data control threads have been joined
[2025-10-13 11:23:56] 2025-10-13 09:23:07,007 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:23:56] 2025-10-13 09:23:07,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:23:56] 2025-10-13 09:23:07,588 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:07,589 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:07,589 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:07,808 | INFO     | [payload] control thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:07,899 | INFO     | all job control threads have been joined
[2025-10-13 11:23:56] 2025-10-13 09:23:08,004 | INFO     | [data] control thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:08,462 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:08,659 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:08,901 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:08,904 | INFO     | [job] control thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:08,950 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:08,954 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:08,997 | INFO     | [job] validate thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:08,998 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:09,030 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:11,014 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:16,957 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:23:56] 2025-10-13 09:23:17,964 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:23:56] 2025-10-13 09:23:36,577 | INFO     | PID=37173 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 11:23:56] 2025-10-13 09:23:36,577 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:23:56] 2025-10-13 09:23:36,577 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:23:56] 2025-10-13 09:23:36,577 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:23:56] 2025-10-13 09:23:50,280 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:23:56] 2025-10-13 09:23:50,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139781667243840)>', '<ExcThread(monitor, started 139781010859776)>']
[2025-10-13 11:23:56] 2025-10-13 09:23:51,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:23:56] 2025-10-13 09:23:51,658 | INFO     | [monitor] control thread has ended
[2025-10-13 11:23:56] 2025-10-13 09:23:55,695 | INFO     | all workflow threads have been joined
[2025-10-13 11:23:56] 2025-10-13 09:23:55,696 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:23:56] 2025-10-13 09:23:55,697 | INFO     | traces error code: 0
[2025-10-13 11:23:56] 2025-10-13 09:23:55,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:23:56] 2025-10-13 09:23:55,744 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:23:56] 2025-10-13 09:23:55,747 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:23:56] 2025-10-13 09:23:55,750 [wrapper] pilotpid: 37173
[2025-10-13 11:23:56] 2025-10-13 09:23:55,753 [wrapper] Pilot exit status: 0
[2025-10-13 11:23:56] 2025-10-13 09:23:55,760 [wrapper] pandaids: 6840537557
[2025-10-13 11:23:56] 2025-10-13 09:23:55,777 [wrapper] cleanup supervisor_pilot   55986 37174
[2025-10-13 11:23:56] 2025-10-13 09:23:55,779 [wrapper] Test setup, not cleaning
[2025-10-13 11:23:56] 2025-10-13 09:23:55,782 [wrapper] apfmon messages muted
[2025-10-13 11:23:56] 2025-10-13 09:23:55,784 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:23:56] 2025-10-13 09:23:55,786 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:23:56]  *** Error codes and diagnostics ***
[2025-10-13 11:23:56]     "exeErrorCode": 0,
[2025-10-13 11:23:56]     "exeErrorDiag": "",
[2025-10-13 11:23:56]     "pilotErrorCode": 0,
[2025-10-13 11:23:56]     "pilotErrorDiag": "",
[2025-10-13 11:23:56]  *** Listing of results directory ***
[2025-10-13 11:23:56] total 409480
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc    563267 Oct  7 09:02 pilot3.tar.gz
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc      5112 Oct 12 20:52 queuedata.json
[2025-10-13 11:23:56] -rwx------ 1 boinc boinc     36292 Oct 12 20:52 runpilot2-wrapper.sh
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:23:56] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:49 run_atlas
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:49 job.xml
[2025-10-13 11:23:56] -rw-r--r-- 2 boinc boinc 218263967 Oct 13 09:49 EVNT.46676267._004428.pool.root.1
[2025-10-13 11:23:56] -rw-r--r-- 2 boinc boinc    576709 Oct 13 09:49 input.tar.gz
[2025-10-13 11:23:56] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:49 start_atlas.sh
[2025-10-13 11:23:56] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:49 shared
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:49 boinc_setup_complete
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc      6200 Oct 13 09:49 init_data.xml
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:49 boinc_lockfile
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc      2548 Oct 13 09:49 pandaJob.out
[2025-10-13 11:23:56] -rw------- 1 boinc boinc    972849 Oct 13 09:49 agis_schedconf.cvmfs.json
[2025-10-13 11:23:56] -rw------- 1 boinc boinc   1560580 Oct 13 09:49 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:23:56] drwx------ 4 boinc boinc      4096 Oct 13 09:49 pilot3
[2025-10-13 11:23:56] -rw------- 1 boinc boinc 195010634 Oct 13 11:22 HITS.46676269._086704.pool.root.1
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc       529 Oct 13 11:22 boinc_task_state.xml
[2025-10-13 11:23:56] -rw------- 1 boinc boinc      1020 Oct 13 11:22 memory_monitor_summary.json
[2025-10-13 11:23:56] -rw------- 1 boinc boinc    246198 Oct 13 11:22 log.46676269._086704.job.log.tgz.1
[2025-10-13 11:23:56] -rw------- 1 boinc boinc      7762 Oct 13 11:23 heartbeat.json
[2025-10-13 11:23:56] -rw------- 1 boinc boinc        95 Oct 13 11:23 pilot_heartbeat.json
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:23 boinc_mmap_file
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc        27 Oct 13 11:23 wrapper_checkpoint.txt
[2025-10-13 11:23:56] -rw------- 1 boinc boinc      4822 Oct 13 11:23 pilotlog.txt
[2025-10-13 11:23:56] -rw------- 1 boinc boinc    812501 Oct 13 11:23 log.46676269._086704.job.log.1
[2025-10-13 11:23:56] -rw------- 1 boinc boinc       357 Oct 13 11:23 output.list
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc       620 Oct 13 11:23 runtime_log
[2025-10-13 11:23:56] -rw------- 1 boinc boinc   1075200 Oct 13 11:23 result.tar.gz
[2025-10-13 11:23:56] -rw------- 1 boinc boinc       660 Oct 13 11:23 TDnKDmWMGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1iUMDmVBFImn.diag
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc      8787 Oct 13 11:23 runtime_log.err
[2025-10-13 11:23:56] -rw-r--r-- 1 boinc boinc     22249 Oct 13 11:23 stderr.txt
[2025-10-13 11:23:56] HITS file was successfully produced:
[2025-10-13 11:23:56] -rw------- 1 boinc boinc 195010634 Oct 13 11:22 shared/HITS.pool.root.1
[2025-10-13 11:23:56]  *** Contents of shared directory: ***
[2025-10-13 11:23:56] total 405236
[2025-10-13 11:23:56] -rw-r--r-- 2 boinc boinc 218263967 Oct 13 09:49 ATLAS.root_0
[2025-10-13 11:23:56] -rw-r--r-- 2 boinc boinc    576709 Oct 13 09:49 input.tar.gz
[2025-10-13 11:23:56] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:49 start_atlas.sh
[2025-10-13 11:23:56] -rw------- 1 boinc boinc 195010634 Oct 13 11:22 HITS.pool.root.1
[2025-10-13 11:23:56] -rw------- 1 boinc boinc   1075200 Oct 13 11:23 result.tar.gz
11:23:57 (33444): run_atlas exited; CPU time 16024.245983
11:23:57 (33444): called boinc_finish(0)

</stderr_txt>
]]>

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