Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:42:42 (3909456): wrapper (7.7.26015): starting
14:42:42 (3909456): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 14:42:42] Arguments: --nthreads 3
[2025-10-13 14:42:42] Threads: 3
[2025-10-13 14:42:42] Checking for CVMFS
[2025-10-13 14:42:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:42:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:42:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:42:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:42:43] 2.9.2.0 2214543 5630 82872 151661 3 57 27378171 36864000 0 130560 0 4448453 99.991 197492 926 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 14:42:43] CVMFS is ok
[2025-10-13 14:42:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:42:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:42:43] Further information can be found at the LHC@home message board.
[2025-10-13 14:42:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:42:43] Checking for apptainer binary...
[2025-10-13 14:42:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:42:43] Running /usr/bin/apptainer --version
[2025-10-13 14:42:43] apptainer version 1.4.1-1.1
[2025-10-13 14:42:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:42:43] thA361a
[2025-10-13 14:42:43] apptainer works
[2025-10-13 14:42:43] Set ATHENA_PROC_NUMBER=3
[2025-10-13 14:42:43] Set ATHENA_CORE_NUMBER=3
[2025-10-13 14:42:43] Starting ATLAS job with PandaID=6840428858
[2025-10-13 14:42:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:05:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:05:00]  mtime=0
[2025-10-13 16:05:00]  protocol_id=None
[2025-10-13 16:05:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 16:05:00]  replicas=None
[2025-10-13 16:05:00]  scope=mc23_13p6TeV
[2025-10-13 16:05:00]  status=None
[2025-10-13 16:05:00]  status_code=0
[2025-10-13 16:05:00]  storage_token=
[2025-10-13 16:05:00]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840428858/log.46676269._084442.job.log.tgz.1
[2025-10-13 16:05:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/de/log.46676269._084442.job.log.tgz.1
[2025-10-13 16:05:00]  workdir=None
[2025-10-13 16:05:00] ]
[2025-10-13 16:05:00] 2025-10-13 14:03:53,630 | INFO     | transferring file log.46676269._084442.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840428858/log.46676269._084442.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 16:05:00] 2025-10-13 14:03:53,630 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840428858/log.46676269._084442.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0844
[2025-10-13 16:05:00] 2025-10-13 14:03:53,644 | INFO     | adding to output.list: log.46676269._084442.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/de/log.46676269._084442.job.log.tg
[2025-10-13 16:05:00] 2025-10-13 14:03:53,644 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 16:05:00] 2025-10-13 14:03:53,644 | INFO     | summary of transferred files:
[2025-10-13 16:05:00] 2025-10-13 14:03:53,644 | INFO     |  -- lfn=log.46676269._084442.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 16:05:00] 2025-10-13 14:03:53,644 | INFO     | stage-out finished correctly
[2025-10-13 16:05:00] 2025-10-13 14:03:54,431 | INFO     | time since job start (4865s) is within the limit (172800.0s)
[2025-10-13 16:05:00] 2025-10-13 14:03:54,524 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 16:05:00] 2025-10-13 14:03:54,555 | INFO     | job 6840428858 has state=finished
[2025-10-13 16:05:00] 2025-10-13 14:03:54,555 | INFO     | preparing for final server update for job 6840428858 in state='finished'
[2025-10-13 16:05:00] 2025-10-13 14:03:54,556 | INFO     | this job has now completed (state=finished)
[2025-10-13 16:05:00] 2025-10-13 14:03:54,556 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 16:05:00] 2025-10-13 14:03:54,556 | INFO     | log transfer has been attempted: DONE
[2025-10-13 16:05:00] 2025-10-13 14:03:54,556 | INFO     | job 6840428858 has finished - writing final server update
[2025-10-13 16:05:00] 2025-10-13 14:03:54,556 | INFO     | total number of processed events: 400 (read)
[2025-10-13 16:05:00] 2025-10-13 14:03:54,556 | INFO     | executing command: lscpu
[2025-10-13 16:05:00] 2025-10-13 14:03:54,570 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 16:05:00] 2025-10-13 14:03:56,437 | INFO     | time since job start (4867s) is within the limit (172800.0s)
[2025-10-13 16:05:00] 2025-10-13 14:03:57,378 | WARNING  | process 3919615 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 16:05:00] 2025-10-13 14:03:57,378 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840428858/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:05:00] 2025-10-13 14:03:57,435 | INFO     | number of running child processes to parent process 3919615: 1
[2025-10-13 16:05:00] 2025-10-13 14:03:57,435 | INFO     | maximum number of monitored processes: 6
[2025-10-13 16:05:00] 2025-10-13 14:03:58,442 | INFO     | time since job start (4869s) is within the limit (172800.0s)
[2025-10-13 16:05:00] 2025-10-13 14:03:59,372 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 16:05:00] 2025-10-13 14:03:59,373 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3667.089
[2025-10-13 16:05:00] 2025-10-13 14:03:59,374 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840428858/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:05:00] 2025-10-13 14:03:59,375 | INFO     | extracted standard info from prmon json
[2025-10-13 16:05:00] 2025-10-13 14:03:59,375 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 16:05:00] 2025-10-13 14:03:59,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 16:05:00] 2025-10-13 14:03:59,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:05:00] 2025-10-13 14:03:59,375 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | sum of square deviations: 120605052.0
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | sum of deviations: -11024908261.000002
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | mean x: 1760361890.0
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | mean y: 2466527.0410958906
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | -- intersect: 160922992007.27206
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | intersect: 160922992007.27206
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | chi2: 0.07936853480704979
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | -- intersect: 160922992007.27206
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | current memory leak: -91.41 B/s (using 73 data points, chi2=0.08)
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | could have reported an average CPU frequency of 3882 MHz (6 samples)
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | ..............................
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | . Timing measurements:
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | . get job = 0 s
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | . initial setup = 1 s
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | . payload setup = 3 s
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | . stage-in = 0 s
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | . payload execution = 4844 s
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | . stage-out = 0 s
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | . log creation = 0 s
[2025-10-13 16:05:00] 2025-10-13 14:03:59,376 | INFO     | ..............................
[2025-10-13 16:05:00] 2025-10-13 14:03:59,407 | INFO     | 
[2025-10-13 16:05:00] 2025-10-13 14:03:59,407 | INFO     | job summary report
[2025-10-13 16:05:00] 2025-10-13 14:03:59,407 | INFO     | --------------------------------------------------
[2025-10-13 16:05:00] 2025-10-13 14:03:59,407 | INFO     | PanDA job id: 6840428858
[2025-10-13 16:05:00] 2025-10-13 14:03:59,407 | INFO     | task id: 46676269
[2025-10-13 16:05:00] 2025-10-13 14:03:59,407 | INFO     | errors: (none)
[2025-10-13 16:05:00] 2025-10-13 14:03:59,407 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:05:00] 2025-10-13 14:03:59,407 | INFO     | pilot state: finished 
[2025-10-13 16:05:00] 2025-10-13 14:03:59,407 | INFO     | transexitcode: 0
[2025-10-13 16:05:00] 2025-10-13 14:03:59,407 | INFO     | exeerrorcode: 0
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | exeerrordiag: 
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | exitcode: 0
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | exitmsg: OK
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | cpuconsumptiontime: 13832 s
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | nevents: 400
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | neventsw: 0
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | pid: 3919615
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | pgrp: 3919615
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | corecount: 3
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | event service: False
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | sizes: {0: 2348860, 3: 2349122, 11: 2349150, 4851: 2384559, 4852: 2384559, 4857: 2384753}
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | --------------------------------------------------
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | 
[2025-10-13 16:05:00] 2025-10-13 14:03:59,408 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,420 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:05:00] 2025-10-13 14:03:59,421 | INFO     | job 6840428858 has completed (purged errors)
[2025-10-13 16:05:00] 2025-10-13 14:03:59,421 | INFO     | overall cleanup function is called
[2025-10-13 16:05:00] 2025-10-13 14:04:00,425 | INFO     | --- collectZombieJob: --- 10, [3919615]
[2025-10-13 16:05:00] 2025-10-13 14:04:00,425 | INFO     | zombie collector waiting for pid 3919615
[2025-10-13 16:05:00] 2025-10-13 14:04:00,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:05:00] 2025-10-13 14:04:00,425 | INFO     | collected zombie processes
[2025-10-13 16:05:00] 2025-10-13 14:04:00,425 | INFO     | will attempt to kill all subprocesses of pid=3919615
[2025-10-13 16:05:00] 2025-10-13 14:04:00,469 | INFO     | process IDs to be killed: [3919615] (in reverse order)
[2025-10-13 16:05:00] 2025-10-13 14:04:00,495 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:05:00] 2025-10-13 14:04:00,495 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:05:00] 2025-10-13 14:04:00,496 | INFO     | did not find any defunct processes belonging to 3919615
[2025-10-13 16:05:00] 2025-10-13 14:04:00,497 | INFO     | did not find any defunct processes belonging to 3919615
[2025-10-13 16:05:00] 2025-10-13 14:04:00,497 | INFO     | ready for new job
[2025-10-13 16:05:00] 2025-10-13 14:04:00,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:05:00] 2025-10-13 14:04:00,498 | INFO     | ***************************************
[2025-10-13 16:05:00] 2025-10-13 14:04:00,498 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:05:00] 2025-10-13 14:04:00,498 | INFO     | ***************************************
[2025-10-13 16:05:00] 2025-10-13 14:04:00,498 | INFO     | 
[2025-10-13 16:05:00] 2025-10-13 14:04:00,498 | INFO     | architecture information:
[2025-10-13 16:05:00] 2025-10-13 14:04:00,499 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:05:00] 2025-10-13 14:04:00,507 | INFO     | cat /etc/os-release:
[2025-10-13 16:05:00] NAME="CentOS Linux"
[2025-10-13 16:05:00] VERSION="7 (Core)"
[2025-10-13 16:05:00] ID="centos"
[2025-10-13 16:05:00] ID_LIKE="rhel fedora"
[2025-10-13 16:05:00] VERSION_ID="7"
[2025-10-13 16:05:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:05:00] ANSI_COLOR="0;31"
[2025-10-13 16:05:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:05:00] HOME_URL="https://www.centos.org/"
[2025-10-13 16:05:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:05:00] 
[2025-10-13 16:05:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:05:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:05:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:05:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:05:00] 
[2025-10-13 16:05:00] 2025-10-13 14:04:00,508 | INFO     | ***************************************
[2025-10-13 16:05:00] 2025-10-13 14:04:01,011 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 16:05:00] 2025-10-13 14:04:01,022 | INFO     | sufficient remaining disk space (277026439168 B)
[2025-10-13 16:05:00] 2025-10-13 14:04:01,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:05:00] 2025-10-13 14:04:01,022 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:05:00] 2025-10-13 14:04:01,022 | INFO     | update_server=False
[2025-10-13 16:05:00] 2025-10-13 14:04:01,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:05:00] 2025-10-13 14:04:01,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:05:00] 2025-10-13 14:04:01,023 | INFO     | aborting loop
[2025-10-13 16:05:00] 2025-10-13 14:04:01,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:05:00] 2025-10-13 14:04:01,023 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:05:00] 2025-10-13 14:04:01,404 | INFO     | all payload control threads have been joined
[2025-10-13 16:05:00] 2025-10-13 14:04:01,488 | INFO     | all data control threads have been joined
[2025-10-13 16:05:00] 2025-10-13 14:04:01,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:05:00] 2025-10-13 14:04:01,882 | INFO     | all job control threads have been joined
[2025-10-13 16:05:00] 2025-10-13 14:04:02,028 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:02,029 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:02,029 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:02,301 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:02,410 | INFO     | [payload] control thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:02,494 | INFO     | [data] control thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:02,888 | INFO     | [job] control thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:03,169 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:03,255 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:03,273 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:03,340 | INFO     | [job] validate thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:03,363 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:03,441 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:03,694 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:05,030 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:11,321 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:05:00] 2025-10-13 14:04:12,327 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:05:00] 2025-10-13 14:04:31,571 | INFO     | PID=3913172 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 16:05:00] 2025-10-13 14:04:31,571 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:05:00] 2025-10-13 14:04:31,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:05:00] 2025-10-13 14:04:31,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:05:00] 2025-10-13 14:04:54,009 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:05:00] 2025-10-13 14:04:55,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140322073081664)>', '<ExcThread(monitor, started 140321052673792)>']
[2025-10-13 16:05:00] 2025-10-13 14:04:56,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:05:00] 2025-10-13 14:04:56,702 | INFO     | [monitor] control thread has ended
[2025-10-13 16:05:00] 2025-10-13 14:05:00,717 | INFO     | all workflow threads have been joined
[2025-10-13 16:05:00] 2025-10-13 14:05:00,717 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:05:00] 2025-10-13 14:05:00,717 | INFO     | traces error code: 0
[2025-10-13 16:05:00] 2025-10-13 14:05:00,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:05:00] 2025-10-13 14:05:00,769 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:05:00] 2025-10-13 14:05:00,771 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:05:00] 2025-10-13 14:05:00,774 [wrapper] pilotpid: 3913172
[2025-10-13 16:05:00] 2025-10-13 14:05:00,776 [wrapper] Pilot exit status: 0
[2025-10-13 16:05:00] 2025-10-13 14:05:00,784 [wrapper] pandaids: 6840428858
[2025-10-13 16:05:00] 2025-10-13 14:05:00,803 [wrapper] cleanup supervisor_pilot 3933063 3913173
[2025-10-13 16:05:00] 2025-10-13 14:05:00,805 [wrapper] Test setup, not cleaning
[2025-10-13 16:05:00] 2025-10-13 14:05:00,808 [wrapper] apfmon messages muted
[2025-10-13 16:05:00] 2025-10-13 14:05:00,810 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:05:00] 2025-10-13 14:05:00,813 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:05:00]  *** Error codes and diagnostics ***
[2025-10-13 16:05:00]     "exeErrorCode": 0,
[2025-10-13 16:05:00]     "exeErrorDiag": "",
[2025-10-13 16:05:00]     "pilotErrorCode": 0,
[2025-10-13 16:05:00]     "pilotErrorDiag": "",
[2025-10-13 16:05:00]  *** Listing of results directory ***
[2025-10-13 16:05:00] total 415776
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:49 pilot3.tar.gz
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc      5112 Oct 12 19:11 queuedata.json
[2025-10-13 16:05:00] -rwx------ 1 boinc boinc     36292 Oct 12 19:11 runpilot2-wrapper.sh
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc       100 Oct 13 14:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:05:00] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 14:42 run_atlas
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc       105 Oct 13 14:42 job.xml
[2025-10-13 16:05:00] -rw-r--r-- 2 boinc boinc 223810838 Oct 13 14:42 EVNT.46676267._004802.pool.root.1
[2025-10-13 16:05:00] -rw-r--r-- 2 boinc boinc    569678 Oct 13 14:42 input.tar.gz
[2025-10-13 16:05:00] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:42 start_atlas.sh
[2025-10-13 16:05:00] drwxrwx--x 2 boinc boinc      4096 Oct 13 14:42 shared
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:42 boinc_setup_complete
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc      6448 Oct 13 14:42 init_data.xml
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:42 boinc_lockfile
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc      2550 Oct 13 14:42 pandaJob.out
[2025-10-13 16:05:00] -rw------- 1 boinc boinc    972497 Oct 13 14:42 agis_schedconf.cvmfs.json
[2025-10-13 16:05:00] -rw------- 1 boinc boinc   1560580 Oct 13 14:42 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:05:00] drwx------ 5 boinc boinc      4096 Oct 13 14:42 pilot3
[2025-10-13 16:05:00] -rw------- 1 boinc boinc 196087565 Oct 13 16:03 HITS.46676269._084442.pool.root.1
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc       530 Oct 13 16:03 boinc_task_state.xml
[2025-10-13 16:05:00] -rw------- 1 boinc boinc      1014 Oct 13 16:03 memory_monitor_summary.json
[2025-10-13 16:05:00] -rw------- 1 boinc boinc    262534 Oct 13 16:03 log.46676269._084442.job.log.tgz.1
[2025-10-13 16:05:00] -rw------- 1 boinc boinc      7751 Oct 13 16:03 heartbeat.json
[2025-10-13 16:05:00] -rw------- 1 boinc boinc        95 Oct 13 16:04 pilot_heartbeat.json
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc        27 Oct 13 16:04 wrapper_checkpoint.txt
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc      8192 Oct 13 16:04 boinc_mmap_file
[2025-10-13 16:05:00] -rw------- 1 boinc boinc      4824 Oct 13 16:05 pilotlog.txt
[2025-10-13 16:05:00] -rw------- 1 boinc boinc    715859 Oct 13 16:05 log.46676269._084442.job.log.1
[2025-10-13 16:05:00] -rw------- 1 boinc boinc       357 Oct 13 16:05 output.list
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc       620 Oct 13 16:05 runtime_log
[2025-10-13 16:05:00] -rw------- 1 boinc boinc    993280 Oct 13 16:05 result.tar.gz
[2025-10-13 16:05:00] -rw------- 1 boinc boinc       659 Oct 13 16:05 yx9NDmXmES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEokNDmpJ4Fzn.diag
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc      8782 Oct 13 16:05 runtime_log.err
[2025-10-13 16:05:00] -rw-r--r-- 1 boinc boinc     21662 Oct 13 16:05 stderr.txt
[2025-10-13 16:05:00] HITS file was successfully produced:
[2025-10-13 16:05:00] -rw------- 1 boinc boinc 196087565 Oct 13 16:03 shared/HITS.pool.root.1
[2025-10-13 16:05:00]  *** Contents of shared directory: ***
[2025-10-13 16:05:00] total 411616
[2025-10-13 16:05:00] -rw-r--r-- 2 boinc boinc 223810838 Oct 13 14:42 ATLAS.root_0
[2025-10-13 16:05:00] -rw-r--r-- 2 boinc boinc    569678 Oct 13 14:42 input.tar.gz
[2025-10-13 16:05:00] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:42 start_atlas.sh
[2025-10-13 16:05:00] -rw------- 1 boinc boinc 196087565 Oct 13 16:03 HITS.pool.root.1
[2025-10-13 16:05:00] -rw------- 1 boinc boinc    993280 Oct 13 16:05 result.tar.gz
16:05:02 (3909456): run_atlas exited; CPU time 13850.863611
16:05:02 (3909456): called boinc_finish(0)

</stderr_txt>
]]>

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