Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
18:18:14 (2423958): wrapper (7.7.26015): starting
18:18:14 (2423958): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 18:18:14] Arguments: --nthreads 4
[2025-10-12 18:18:14] Threads: 4
[2025-10-12 18:18:14] Checking for CVMFS
[2025-10-12 18:18:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:18:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:18:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:18:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:18:14] 2.13.2.0 3732220 7164 60172 151639 1 18 2704475 4096001 13740 130560 0 49838028 99.999 377098 1283 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 18:18:14] CVMFS is ok
[2025-10-12 18:18:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:18:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 18:18:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 18:18:14] Further information can be found at the LHC@home message board.
[2025-10-12 18:18:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:18:14] Checking for apptainer binary...
[2025-10-12 18:18:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:18:14] Running /usr/bin/apptainer --version
[2025-10-12 18:18:14] apptainer version 1.4.3
[2025-10-12 18:18:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:18:15] T7810-Ubuntu
[2025-10-12 18:18:15] apptainer works
[2025-10-12 18:18:15] Set ATHENA_PROC_NUMBER=4
[2025-10-12 18:18:15] Set ATHENA_CORE_NUMBER=4
[2025-10-12 18:18:15] Starting ATLAS job with PandaID=6840749637
[2025-10-12 18:18:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:38:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:38:54] 2025-10-13 01:37:58,766 | INFO     | mean x: 1760313486.5
[2025-10-12 21:38:54] 2025-10-13 01:37:58,766 | INFO     | mean y: 2280429.7653061226
[2025-10-12 21:38:54] 2025-10-13 01:37:58,766 | INFO     | -- intersect: -2708775532.4055314
[2025-10-12 21:38:54] 2025-10-13 01:37:58,766 | INFO     | intersect: -2708775532.4055314
[2025-10-12 21:38:54] 2025-10-13 01:37:58,766 | INFO     | chi2: 2.1710768545653107
[2025-10-12 21:38:54] 2025-10-13 01:37:58,767 | INFO     | sum of square deviations: 2160561440.0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,768 | INFO     | sum of deviations: 15331942215.0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,768 | INFO     | mean x: 1760313334.0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,769 | INFO     | mean y: 2290488.9057591623
[2025-10-12 21:38:54] 2025-10-13 01:37:58,769 | INFO     | -- intersect: -12489380341.423414
[2025-10-12 21:38:54] 2025-10-13 01:37:58,769 | INFO     | intersect: -12489380341.423414
[2025-10-12 21:38:54] 2025-10-13 01:37:58,769 | INFO     | chi2: 1.388094573493412
[2025-10-12 21:38:54] 2025-10-13 01:37:58,769 | INFO     | current chi2=1.388094573493412 (change=36.06423602303411 %)
[2025-10-12 21:38:54] 2025-10-13 01:37:58,770 | INFO     | sum of square deviations: 1995283922.5
[2025-10-12 21:38:54] 2025-10-13 01:37:58,771 | INFO     | sum of deviations: 14852593112.999998
[2025-10-12 21:38:54] 2025-10-13 01:37:58,771 | INFO     | mean x: 1760313181.5
[2025-10-12 21:38:54] 2025-10-13 01:37:58,771 | INFO     | mean y: 2290046.5161290322
[2025-10-12 21:38:54] 2025-10-13 01:37:58,771 | INFO     | -- intersect: -13101216247.220379
[2025-10-12 21:38:54] 2025-10-13 01:37:58,772 | INFO     | intersect: -13101216247.220379
[2025-10-12 21:38:54] 2025-10-13 01:37:58,772 | INFO     | chi2: 1.3890657645618811
[2025-10-12 21:38:54] 2025-10-13 01:37:58,772 | INFO     | current chi2=1.3890657645618811 (change=-0.06996577084981385 %)
[2025-10-12 21:38:54] 2025-10-13 01:37:58,772 | INFO     | right removable region: 185
[2025-10-12 21:38:54] 2025-10-13 01:37:58,773 | INFO     | sum of square deviations: 2160561440.0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,774 | INFO     | sum of deviations: -16689522591.0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,774 | INFO     | mean x: 1760313639.0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,774 | INFO     | mean y: 2297868.35078534
[2025-10-12 21:38:54] 2025-10-13 01:37:58,774 | INFO     | -- intersect: 13600057090.294466
[2025-10-12 21:38:54] 2025-10-13 01:37:58,775 | INFO     | intersect: 13600057090.294466
[2025-10-12 21:38:54] 2025-10-13 01:37:58,775 | INFO     | chi2: 0.8983632780983459
[2025-10-12 21:38:54] 2025-10-13 01:37:58,775 | INFO     | current chi2=0.8983632780983459 (change=58.62130462082538 %)
[2025-10-12 21:38:54] 2025-10-13 01:37:58,775 | INFO     | sum of square deviations: 1995283922.5
[2025-10-12 21:38:54] 2025-10-13 01:37:58,777 | INFO     | sum of deviations: -8383837712.5
[2025-10-12 21:38:54] 2025-10-13 01:37:58,777 | INFO     | mean x: 1760313791.5
[2025-10-12 21:38:54] 2025-10-13 01:37:58,777 | INFO     | mean y: 2290245.7688172045
[2025-10-12 21:38:54] 2025-10-13 01:37:58,777 | INFO     | -- intersect: 7398824134.800623
[2025-10-12 21:38:54] 2025-10-13 01:37:58,777 | INFO     | intersect: 7398824134.800623
[2025-10-12 21:38:54] 2025-10-13 01:37:58,778 | INFO     | chi2: 0.8073949136383303
[2025-10-12 21:38:54] 2025-10-13 01:37:58,778 | INFO     | current chi2=0.8073949136383303 (change=10.126011011110934 %)
[2025-10-12 21:38:54] 2025-10-13 01:37:58,778 | INFO     | left removable region: 20
[2025-10-12 21:38:54] 2025-10-13 01:37:58,778 | INFO     | sum of square deviations: 1392881930.0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,779 | INFO     | sum of deviations: 1924565128.0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,779 | INFO     | mean x: 1760313761.0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,779 | INFO     | mean y: 2301971.139393939
[2025-10-12 21:38:54] 2025-10-13 01:37:58,780 | INFO     | -- intersect: -2429949037.213573
[2025-10-12 21:38:54] 2025-10-13 01:37:58,780 | INFO     | intersect: -2429949037.213573
[2025-10-12 21:38:54] 2025-10-13 01:37:58,780 | INFO     | chi2: 8.126814570461524e-05
[2025-10-12 21:38:54] 2025-10-13 01:37:58,780 | INFO     | -- intersect: -2429949037.213573
[2025-10-12 21:38:54] 2025-10-13 01:37:58,780 | INFO     | current memory leak: 1.38 B/s (using 165 data points, chi2=0.00)
[2025-10-12 21:38:54] 2025-10-13 01:37:58,781 | INFO     | could have reported an average CPU frequency of 2631 MHz (10 samples)
[2025-10-12 21:38:54] 2025-10-13 01:37:58,781 | INFO     | ..............................
[2025-10-12 21:38:54] 2025-10-13 01:37:58,781 | INFO     | . Timing measurements:
[2025-10-12 21:38:54] 2025-10-13 01:37:58,781 | INFO     | . get job = 0 s
[2025-10-12 21:38:54] 2025-10-13 01:37:58,782 | INFO     | . initial setup = 3 s
[2025-10-12 21:38:54] 2025-10-13 01:37:58,782 | INFO     | . payload setup = 7 s
[2025-10-12 21:38:54] 2025-10-13 01:37:58,782 | INFO     | . stage-in = 0 s
[2025-10-12 21:38:54] 2025-10-13 01:37:58,782 | INFO     | . payload execution = 11929 s
[2025-10-12 21:38:54] 2025-10-13 01:37:58,782 | INFO     | . stage-out = 4 s
[2025-10-12 21:38:54] 2025-10-13 01:37:58,782 | INFO     | . log creation = 0 s
[2025-10-12 21:38:54] 2025-10-13 01:37:58,782 | INFO     | ..............................
[2025-10-12 21:38:54] 2025-10-13 01:37:58,782 | INFO     | monitor loop #859: job 0:6840749637 is in state 'finished'
[2025-10-12 21:38:54] 2025-10-13 01:37:58,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:38:54] 2025-10-13 01:37:58,898 | INFO     | 
[2025-10-12 21:38:54] 2025-10-13 01:37:58,898 | INFO     | job summary report
[2025-10-12 21:38:54] 2025-10-13 01:37:58,898 | INFO     | --------------------------------------------------
[2025-10-12 21:38:54] 2025-10-13 01:37:58,898 | INFO     | PanDA job id: 6840749637
[2025-10-12 21:38:54] 2025-10-13 01:37:58,898 | INFO     | task id: 46676269
[2025-10-12 21:38:54] 2025-10-13 01:37:58,898 | INFO     | errors: (none)
[2025-10-12 21:38:54] 2025-10-13 01:37:58,899 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:38:54] 2025-10-13 01:37:58,899 | INFO     | pilot state: finished 
[2025-10-12 21:38:54] 2025-10-13 01:37:58,899 | INFO     | transexitcode: 0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,899 | INFO     | exeerrorcode: 0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,899 | INFO     | exeerrordiag: 
[2025-10-12 21:38:54] 2025-10-13 01:37:58,899 | INFO     | exitcode: 0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,899 | INFO     | exitmsg: OK
[2025-10-12 21:38:54] 2025-10-13 01:37:58,899 | INFO     | cpuconsumptiontime: 46569 s
[2025-10-12 21:38:54] 2025-10-13 01:37:58,899 | INFO     | nevents: 400
[2025-10-12 21:38:54] 2025-10-13 01:37:58,899 | INFO     | neventsw: 0
[2025-10-12 21:38:54] 2025-10-13 01:37:58,900 | INFO     | pid: 2434945
[2025-10-12 21:38:54] 2025-10-13 01:37:58,900 | INFO     | pgrp: 2434945
[2025-10-12 21:38:54] 2025-10-13 01:37:58,900 | INFO     | corecount: 4
[2025-10-12 21:38:54] 2025-10-13 01:37:58,900 | INFO     | event service: False
[2025-10-12 21:38:54] 2025-10-13 01:37:58,900 | INFO     | sizes: {0: 2348701, 1: 2348900, 6: 2349162, 11: 2349190, 11940: 2378504, 11941: 2378503, 11945: 2387715, 11947: 2387771, 11953: 2387965}
[2025-10-12 21:38:54] 2025-10-13 01:37:58,900 | INFO     | --------------------------------------------------
[2025-10-12 21:38:54] 2025-10-13 01:37:58,900 | INFO     | 
[2025-10-12 21:38:54] 2025-10-13 01:37:58,900 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/19
[2025-10-12 21:38:54] 2025-10-13 01:37:58,929 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,929 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,930 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,930 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,930 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,930 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,931 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:38:54] 2025-10-13 01:37:58,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,932 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:38:54] 2025-10-13 01:37:58,932 | INFO     | job 6840749637 has completed (purged errors)
[2025-10-12 21:38:54] 2025-10-13 01:37:58,932 | INFO     | overall cleanup function is called
[2025-10-12 21:38:54] 2025-10-13 01:37:59,941 | INFO     | --- collectZombieJob: --- 10, [2434945]
[2025-10-12 21:38:54] 2025-10-13 01:37:59,941 | INFO     | zombie collector waiting for pid 2434945
[2025-10-12 21:38:54] 2025-10-13 01:37:59,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:38:54] 2025-10-13 01:37:59,941 | INFO     | collected zombie processes
[2025-10-12 21:38:54] 2025-10-13 01:37:59,941 | INFO     | will attempt to kill all subprocesses of pid=2434945
[2025-10-12 21:38:54] 2025-10-13 01:38:00,472 | INFO     | process IDs to be killed: [2434945] (in reverse order)
[2025-10-12 21:38:54] 2025-10-13 01:38:00,598 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:38:54] 2025-10-13 01:38:00,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:38:54] 2025-10-13 01:38:00,611 | INFO     | did not find any defunct processes belonging to 2434945
[2025-10-12 21:38:54] 2025-10-13 01:38:00,622 | INFO     | did not find any defunct processes belonging to 2434945
[2025-10-12 21:38:54] 2025-10-13 01:38:00,622 | INFO     | ready for new job
[2025-10-12 21:38:54] 2025-10-13 01:38:00,623 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:38:54] 2025-10-13 01:38:00,625 | INFO     | ***************************************
[2025-10-12 21:38:54] 2025-10-13 01:38:00,625 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:38:54] 2025-10-13 01:38:00,625 | INFO     | ***************************************
[2025-10-12 21:38:54] 2025-10-13 01:38:00,626 | INFO     | 
[2025-10-12 21:38:54] 2025-10-13 01:38:00,629 | INFO     | architecture information:
[2025-10-12 21:38:54] 2025-10-13 01:38:00,629 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:38:54] 2025-10-13 01:38:00,647 | INFO     | cat /etc/os-release:
[2025-10-12 21:38:54] NAME="CentOS Linux"
[2025-10-12 21:38:54] VERSION="7 (Core)"
[2025-10-12 21:38:54] ID="centos"
[2025-10-12 21:38:54] ID_LIKE="rhel fedora"
[2025-10-12 21:38:54] VERSION_ID="7"
[2025-10-12 21:38:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:38:54] ANSI_COLOR="0;31"
[2025-10-12 21:38:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:38:54] HOME_URL="https://www.centos.org/"
[2025-10-12 21:38:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:38:54] 
[2025-10-12 21:38:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:38:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:38:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:38:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:38:54] 
[2025-10-12 21:38:54] 2025-10-13 01:38:00,648 | INFO     | ***************************************
[2025-10-12 21:38:54] 2025-10-13 01:38:01,151 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/19
[2025-10-12 21:38:54] 2025-10-13 01:38:01,169 | INFO     | sufficient remaining disk space (398271184896 B)
[2025-10-12 21:38:54] 2025-10-13 01:38:01,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:38:54] 2025-10-13 01:38:01,170 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:38:54] 2025-10-13 01:38:01,170 | INFO     | update_server=False
[2025-10-12 21:38:54] 2025-10-13 01:38:01,170 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:38:54] 2025-10-13 01:38:01,286 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 21:38:54] 2025-10-13 01:38:01,286 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 21:38:54] 2025-10-13 01:38:01,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:38:54] 2025-10-13 01:38:01,286 | INFO     | will abort loop
[2025-10-12 21:38:54] 2025-10-13 01:38:01,353 | INFO     | all data control threads have been joined
[2025-10-12 21:38:54] 2025-10-13 01:38:01,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:38:54] 2025-10-13 01:38:01,970 | INFO     | all payload control threads have been joined
[2025-10-12 21:38:54] 2025-10-13 01:38:02,175 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:02,291 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:02,358 | INFO     | [data] control thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:02,409 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:02,520 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:02,843 | INFO     | all job control threads have been joined
[2025-10-12 21:38:54] 2025-10-13 01:38:02,861 | INFO     | [job] validate thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:02,976 | INFO     | [payload] control thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:03,101 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:03,173 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:03,345 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:03,500 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:03,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:38:54] 2025-10-13 01:38:03,712 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:03,848 | INFO     | [job] control thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:03,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:38:54] 2025-10-13 01:38:04,911 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:07,714 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:11,880 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:38:54] 2025-10-13 01:38:12,885 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:38:54] 2025-10-13 01:38:29,837 | INFO     | 11973s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 21:38:54] 2025-10-13 01:38:31,402 | INFO     | PID=2427989 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:38:54] 2025-10-13 01:38:31,402 | INFO     | .. there are 16 such processes running
[2025-10-12 21:38:54] 2025-10-13 01:38:31,402 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:38:54] 2025-10-13 01:38:31,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:38:54] 2025-10-13 01:38:31,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:38:54] 2025-10-13 01:38:49,172 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:38:54] 2025-10-13 01:38:49,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128256125953856)>', '<ExcThread(monitor, started 128255474513664)>']
[2025-10-12 21:38:54] 2025-10-13 01:38:50,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:38:54] 2025-10-13 01:38:50,496 | INFO     | [monitor] control thread has ended
[2025-10-12 21:38:54] 2025-10-13 01:38:54,610 | INFO     | all workflow threads have been joined
[2025-10-12 21:38:54] 2025-10-13 01:38:54,610 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:38:54] 2025-10-13 01:38:54,611 | INFO     | traces error code: 0
[2025-10-12 21:38:54] 2025-10-13 01:38:54,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:38:54] 2025-10-13 01:38:54,749 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:38:54] 2025-10-13 01:38:54,754 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:38:54] 2025-10-13 01:38:54,757 [wrapper] pilotpid: 2427989
[2025-10-12 21:38:54] 2025-10-13 01:38:54,762 [wrapper] Pilot exit status: 0
[2025-10-12 21:38:54] 2025-10-13 01:38:54,774 [wrapper] pandaids: 6840749637
[2025-10-12 21:38:54] 2025-10-13 01:38:54,868 [wrapper] cleanup supervisor_pilot 2975669 2427990
[2025-10-12 21:38:54] 2025-10-13 01:38:54,872 [wrapper] Test setup, not cleaning
[2025-10-12 21:38:54] 2025-10-13 01:38:54,875 [wrapper] apfmon messages muted
[2025-10-12 21:38:54] 2025-10-13 01:38:54,878 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:38:54] 2025-10-13 01:38:54,881 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:38:54]  *** Error codes and diagnostics ***
[2025-10-12 21:38:54]     "exeErrorCode": 0,
[2025-10-12 21:38:54]     "exeErrorDiag": "",
[2025-10-12 21:38:54]     "pilotErrorCode": 0,
[2025-10-12 21:38:54]     "pilotErrorDiag": "",
[2025-10-12 21:38:54]  *** Listing of results directory ***
[2025-10-12 21:38:54] total 412232
[2025-10-12 21:38:54] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 12 16:43 pilot3.tar.gz
[2025-10-12 21:38:54] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 12 16:48 queuedata.json
[2025-10-12 21:38:54] -rwx------ 1 whitlerd whitlerd     36292 Oct 12 16:48 runpilot2-wrapper.sh
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 12 18:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:38:54] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 12 18:18 run_atlas
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 12 18:18 job.xml
[2025-10-12 21:38:54] -rw-r--r-- 2 whitlerd whitlerd 221702211 Oct 12 18:18 EVNT.46676267._004862.pool.root.1
[2025-10-12 21:38:54] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 18:18 start_atlas.sh
[2025-10-12 21:38:54] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 12 18:18 shared
[2025-10-12 21:38:54] -rw-r--r-- 2 whitlerd whitlerd    569681 Oct 12 18:18 input.tar.gz
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd      8957 Oct 12 18:18 init_data.xml
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 18:18 boinc_setup_complete
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 18:18 boinc_lockfile
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd      2550 Oct 12 18:18 pandaJob.out
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd    975528 Oct 12 18:18 agis_schedconf.cvmfs.json
[2025-10-12 21:38:54] drwx------ 5 whitlerd whitlerd      4096 Oct 12 18:18 pilot3
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd       530 Oct 12 21:37 boinc_task_state.xml
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd 192376539 Oct 12 21:37 HITS.46676269._089069.pool.root.1
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd      1033 Oct 12 21:37 memory_monitor_summary.json
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd   1560580 Oct 12 21:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd    369772 Oct 12 21:37 log.46676269._089069.job.log.tgz.1
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd        95 Oct 12 21:37 pilot_heartbeat.json
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd      7790 Oct 12 21:37 heartbeat.json
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 12 21:38 boinc_mmap_file
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct 12 21:38 wrapper_checkpoint.txt
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd      5214 Oct 12 21:38 pilotlog.txt
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd   1697894 Oct 12 21:38 log.46676269._089069.job.log.1
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd       357 Oct 12 21:38 output.list
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 12 21:38 runtime_log
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd   2088960 Oct 12 21:38 result.tar.gz
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd      8893 Oct 12 21:38 runtime_log.err
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd       651 Oct 12 21:38 HLuMDmuAIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7UlNDmEf8kEm.diag
[2025-10-12 21:38:54] -rw-rw-r-- 1 whitlerd whitlerd     21155 Oct 12 21:38 stderr.txt
[2025-10-12 21:38:54] HITS file was successfully produced:
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd 192376539 Oct 12 21:37 shared/HITS.pool.root.1
[2025-10-12 21:38:54]  *** Contents of shared directory: ***
[2025-10-12 21:38:54] total 407000
[2025-10-12 21:38:54] -rw-r--r-- 2 whitlerd whitlerd 221702211 Oct 12 18:18 ATLAS.root_0
[2025-10-12 21:38:54] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 18:18 start_atlas.sh
[2025-10-12 21:38:54] -rw-r--r-- 2 whitlerd whitlerd    569681 Oct 12 18:18 input.tar.gz
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd 192376539 Oct 12 21:37 HITS.pool.root.1
[2025-10-12 21:38:54] -rw------- 1 whitlerd whitlerd   2088960 Oct 12 21:38 result.tar.gz
21:38:56 (2423958): run_atlas exited; CPU time 47171.758650
21:38:56 (2423958): called boinc_finish(0)

</stderr_txt>
]]>

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