Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:42:07 (3590): wrapper (7.7.26015): starting
09:42:07 (3590): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 09:42:07] Arguments: --nthreads 8
[2025-10-13 09:42:07] Threads: 8
[2025-10-13 09:42:07] Checking for CVMFS
[2025-10-13 09:42:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:42:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:42:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:42:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:42:10] 2.11.2.0 6199 221759 138828 151653 3 60 20112728 25165824 4632 130560 0 154366495 99.913 64572059 3127 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 09:42:10] CVMFS is ok
[2025-10-13 09:42:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:42:10] Checking for apptainer binary...
[2025-10-13 09:42:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:42:10] Running /usr/bin/apptainer --version
[2025-10-13 09:42:10] apptainer version 1.3.2-1.el7
[2025-10-13 09:42:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:42:14] cg-vwn228.simple-grid.lan
[2025-10-13 09:42:14] apptainer works
[2025-10-13 09:42:14] Set ATHENA_PROC_NUMBER=8
[2025-10-13 09:42:14] Set ATHENA_CORE_NUMBER=8
[2025-10-13 09:42:14] Starting ATLAS job with PandaID=6840537101
[2025-10-13 09:42:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:54:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:54:38] 2025-10-13 11:53:34,201 | INFO     | sum of square deviations: 3972995422.5
[2025-10-13 13:54:38] 2025-10-13 11:53:34,203 | INFO     | sum of deviations: 81116103895.00003
[2025-10-13 13:54:38] 2025-10-13 11:53:34,203 | INFO     | mean x: 1760349140.5
[2025-10-13 13:54:38] 2025-10-13 11:53:34,203 | INFO     | mean y: 2434235.675213675
[2025-10-13 13:54:38] 2025-10-13 11:53:34,204 | INFO     | -- intersect: -35938373287.93879
[2025-10-13 13:54:38] 2025-10-13 11:53:34,204 | INFO     | intersect: -35938373287.93879
[2025-10-13 13:54:38] 2025-10-13 11:53:34,204 | INFO     | chi2: 6.187552646813313
[2025-10-13 13:54:38] 2025-10-13 11:53:34,205 | INFO     | sum of square deviations: 3723716330.0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,207 | INFO     | sum of deviations: 95178488734.00002
[2025-10-13 13:54:38] 2025-10-13 11:53:34,207 | INFO     | mean x: 1760348988.0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,207 | INFO     | mean y: 2442668.3537117904
[2025-10-13 13:54:38] 2025-10-13 11:53:34,207 | INFO     | -- intersect: -44992218974.485855
[2025-10-13 13:54:38] 2025-10-13 11:53:34,207 | INFO     | intersect: -44992218974.485855
[2025-10-13 13:54:38] 2025-10-13 11:53:34,208 | INFO     | chi2: 5.410230014746797
[2025-10-13 13:54:38] 2025-10-13 11:53:34,208 | INFO     | current chi2=5.410230014746797 (change=12.562683122653503 %)
[2025-10-13 13:54:38] 2025-10-13 11:53:34,208 | INFO     | right removable region: 228
[2025-10-13 13:54:38] 2025-10-13 11:53:34,208 | INFO     | sum of square deviations: 3723716330.0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,210 | INFO     | sum of deviations: 3573746061.000004
[2025-10-13 13:54:38] 2025-10-13 11:53:34,211 | INFO     | mean x: 1760349293.0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,211 | INFO     | mean y: 2481627.1703056768
[2025-10-13 13:54:38] 2025-10-13 11:53:34,211 | INFO     | -- intersect: -1686970735.5565004
[2025-10-13 13:54:38] 2025-10-13 11:53:34,211 | INFO     | intersect: -1686970735.5565004
[2025-10-13 13:54:38] 2025-10-13 11:53:34,211 | INFO     | chi2: 1.8171950071410172
[2025-10-13 13:54:38] 2025-10-13 11:53:34,211 | INFO     | current chi2=1.8171950071410172 (change=70.63144168838869 %)
[2025-10-13 13:54:38] 2025-10-13 11:53:34,212 | INFO     | sum of square deviations: 3485088600.0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,214 | INFO     | sum of deviations: -26094507593.0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,214 | INFO     | mean x: 1760349445.5
[2025-10-13 13:54:38] 2025-10-13 11:53:34,214 | INFO     | mean y: 2500443.714285714
[2025-10-13 13:54:38] 2025-10-13 11:53:34,214 | INFO     | -- intersect: 13183069790.482998
[2025-10-13 13:54:38] 2025-10-13 11:53:34,214 | INFO     | intersect: 13183069790.482998
[2025-10-13 13:54:38] 2025-10-13 11:53:34,215 | INFO     | chi2: 0.9484777697036484
[2025-10-13 13:54:38] 2025-10-13 11:53:34,215 | INFO     | current chi2=0.9484777697036484 (change=47.80539424902542 %)
[2025-10-13 13:54:38] 2025-10-13 11:53:34,215 | INFO     | sum of square deviations: 3256879670.0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,217 | INFO     | sum of deviations: -23111490228.999996
[2025-10-13 13:54:38] 2025-10-13 11:53:34,217 | INFO     | mean x: 1760349598.0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,217 | INFO     | mean y: 2498413.97716895
[2025-10-13 13:54:38] 2025-10-13 11:53:34,217 | INFO     | -- intersect: 12494302427.66401
[2025-10-13 13:54:38] 2025-10-13 11:53:34,217 | INFO     | intersect: 12494302427.66401
[2025-10-13 13:54:38] 2025-10-13 11:53:34,218 | INFO     | chi2: 0.9312278983092382
[2025-10-13 13:54:38] 2025-10-13 11:53:34,218 | INFO     | current chi2=0.9312278983092382 (change=1.8186901101329829 %)
[2025-10-13 13:54:38] 2025-10-13 11:53:34,218 | INFO     | left removable region: 30
[2025-10-13 13:54:38] 2025-10-13 11:53:34,218 | INFO     | sum of square deviations: 2406926989.5
[2025-10-13 13:54:38] 2025-10-13 11:53:34,220 | INFO     | sum of deviations: 4684742965.0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,220 | INFO     | mean x: 1760349872.5
[2025-10-13 13:54:38] 2025-10-13 11:53:34,220 | INFO     | mean y: 2499597.97979798
[2025-10-13 13:54:38] 2025-10-13 11:53:34,220 | INFO     | -- intersect: -3423772456.4318557
[2025-10-13 13:54:38] 2025-10-13 11:53:34,220 | INFO     | intersect: -3423772456.4318557
[2025-10-13 13:54:38] 2025-10-13 11:53:34,221 | INFO     | chi2: 0.0003889485965306538
[2025-10-13 13:54:38] 2025-10-13 11:53:34,221 | INFO     | -- intersect: -3423772456.4318557
[2025-10-13 13:54:38] 2025-10-13 11:53:34,221 | INFO     | current memory leak: 1.95 B/s (using 198 data points, chi2=0.00)
[2025-10-13 13:54:38] 2025-10-13 11:53:34,222 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 13:54:38] 2025-10-13 11:53:34,222 | INFO     | ..............................
[2025-10-13 13:54:38] 2025-10-13 11:53:34,222 | INFO     | . Timing measurements:
[2025-10-13 13:54:38] 2025-10-13 11:53:34,222 | INFO     | . get job = 0 s
[2025-10-13 13:54:38] 2025-10-13 11:53:34,222 | INFO     | . initial setup = 10 s
[2025-10-13 13:54:38] 2025-10-13 11:53:34,222 | INFO     | . payload setup = 122 s
[2025-10-13 13:54:38] 2025-10-13 11:53:34,222 | INFO     | . stage-in = 0 s
[2025-10-13 13:54:38] 2025-10-13 11:53:34,222 | INFO     | . payload execution = 14439 s
[2025-10-13 13:54:38] 2025-10-13 11:53:34,223 | INFO     | . stage-out = 3 s
[2025-10-13 13:54:38] 2025-10-13 11:53:34,223 | INFO     | . log creation = 1 s
[2025-10-13 13:54:38] 2025-10-13 11:53:34,223 | INFO     | ..............................
[2025-10-13 13:54:38] 2025-10-13 11:53:34,889 | INFO     | 
[2025-10-13 13:54:38] 2025-10-13 11:53:34,889 | INFO     | job summary report
[2025-10-13 13:54:38] 2025-10-13 11:53:34,890 | INFO     | --------------------------------------------------
[2025-10-13 13:54:38] 2025-10-13 11:53:34,890 | INFO     | PanDA job id: 6840537101
[2025-10-13 13:54:38] 2025-10-13 11:53:34,890 | INFO     | task id: 46676269
[2025-10-13 13:54:38] 2025-10-13 11:53:34,890 | INFO     | errors: (none)
[2025-10-13 13:54:38] 2025-10-13 11:53:34,890 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:54:38] 2025-10-13 11:53:34,890 | INFO     | pilot state: finished 
[2025-10-13 13:54:38] 2025-10-13 11:53:34,890 | INFO     | transexitcode: 0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,890 | INFO     | exeerrorcode: 0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,890 | INFO     | exeerrordiag: 
[2025-10-13 13:54:38] 2025-10-13 11:53:34,890 | INFO     | exitcode: 0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,891 | INFO     | exitmsg: OK
[2025-10-13 13:54:38] 2025-10-13 11:53:34,891 | INFO     | cpuconsumptiontime: 53564 s
[2025-10-13 13:54:38] 2025-10-13 11:53:34,891 | INFO     | nevents: 400
[2025-10-13 13:54:38] 2025-10-13 11:53:34,891 | INFO     | neventsw: 0
[2025-10-13 13:54:38] 2025-10-13 11:53:34,891 | INFO     | pid: 13943
[2025-10-13 13:54:38] 2025-10-13 11:53:34,891 | INFO     | pgrp: 13943
[2025-10-13 13:54:38] 2025-10-13 11:53:34,891 | INFO     | corecount: 8
[2025-10-13 13:54:38] 2025-10-13 11:53:34,891 | INFO     | event service: False
[2025-10-13 13:54:38] 2025-10-13 11:53:34,891 | INFO     | sizes: {0: 2348631, 1: 2348886, 12: 2348886, 23: 2348914, 34: 2348942, 44: 2348970, 55: 2349126, 66: 2349154, 77: 2349182, 87: 2349238, 95: 2349528, 98: 2349836, 1
[2025-10-13 13:54:38] 2025-10-13 11:53:34,891 | INFO     | --------------------------------------------------
[2025-10-13 13:54:38] 2025-10-13 11:53:34,892 | INFO     | 
[2025-10-13 13:54:38] 2025-10-13 11:53:34,892 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-10-13 13:54:38] 2025-10-13 11:53:35,263 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,265 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:54:38] 2025-10-13 11:53:35,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,265 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:54:38] 2025-10-13 11:53:35,265 | INFO     | job 6840537101 has completed (purged errors)
[2025-10-13 13:54:38] 2025-10-13 11:53:35,265 | INFO     | overall cleanup function is called
[2025-10-13 13:54:38] 2025-10-13 11:53:36,274 | INFO     | --- collectZombieJob: --- 10, [13943]
[2025-10-13 13:54:38] 2025-10-13 11:53:36,274 | INFO     | zombie collector waiting for pid 13943
[2025-10-13 13:54:38] 2025-10-13 11:53:36,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:54:38] 2025-10-13 11:53:36,275 | INFO     | collected zombie processes
[2025-10-13 13:54:38] 2025-10-13 11:53:36,275 | INFO     | will attempt to kill all subprocesses of pid=13943
[2025-10-13 13:54:38] 2025-10-13 11:53:36,425 | INFO     | process IDs to be killed: [13943] (in reverse order)
[2025-10-13 13:54:38] 2025-10-13 11:53:37,302 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:54:38] 2025-10-13 11:53:37,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:54:38] 2025-10-13 11:53:37,306 | INFO     | did not find any defunct processes belonging to 13943
[2025-10-13 13:54:38] 2025-10-13 11:53:37,309 | INFO     | did not find any defunct processes belonging to 13943
[2025-10-13 13:54:38] 2025-10-13 11:53:37,309 | INFO     | ready for new job
[2025-10-13 13:54:38] 2025-10-13 11:53:37,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:54:38] 2025-10-13 11:53:37,311 | INFO     | ***************************************
[2025-10-13 13:54:38] 2025-10-13 11:53:37,311 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:54:38] 2025-10-13 11:53:37,311 | INFO     | ***************************************
[2025-10-13 13:54:38] 2025-10-13 11:53:37,312 | INFO     | 
[2025-10-13 13:54:38] 2025-10-13 11:53:37,312 | INFO     | pilot is running in a VM
[2025-10-13 13:54:38] 2025-10-13 11:53:37,312 | INFO     | architecture information:
[2025-10-13 13:54:38] 2025-10-13 11:53:37,325 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:54:38] 2025-10-13 11:53:37,532 | INFO     | cat /etc/os-release:
[2025-10-13 13:54:38] NAME="CentOS Linux"
[2025-10-13 13:54:38] VERSION="7 (Core)"
[2025-10-13 13:54:38] ID="centos"
[2025-10-13 13:54:38] ID_LIKE="rhel fedora"
[2025-10-13 13:54:38] VERSION_ID="7"
[2025-10-13 13:54:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:54:38] ANSI_COLOR="0;31"
[2025-10-13 13:54:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:54:38] HOME_URL="https://www.centos.org/"
[2025-10-13 13:54:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:54:38] 
[2025-10-13 13:54:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:54:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:54:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:54:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:54:38] 
[2025-10-13 13:54:38] 2025-10-13 11:53:37,532 | INFO     | ***************************************
[2025-10-13 13:54:38] 2025-10-13 11:53:38,035 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-10-13 13:54:38] 2025-10-13 11:53:38,260 | INFO     | sufficient remaining disk space (495619932160 B)
[2025-10-13 13:54:38] 2025-10-13 11:53:38,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:54:38] 2025-10-13 11:53:38,260 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:54:38] 2025-10-13 11:53:38,261 | INFO     | update_server=False
[2025-10-13 13:54:38] 2025-10-13 11:53:38,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:54:38] 2025-10-13 11:53:38,440 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 13:54:38] 2025-10-13 11:53:38,440 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 13:54:38] 2025-10-13 11:53:38,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:54:38] 2025-10-13 11:53:38,441 | INFO     | will abort loop
[2025-10-13 13:54:38] 2025-10-13 11:53:38,441 | INFO     | all data control threads have been joined
[2025-10-13 13:54:38] 2025-10-13 11:53:38,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:54:38] 2025-10-13 11:53:38,955 | INFO     | all payload control threads have been joined
[2025-10-13 13:54:38] 2025-10-13 11:53:39,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:54:38] 2025-10-13 11:53:39,266 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:39,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:54:38] 2025-10-13 11:53:39,446 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:39,447 | INFO     | [data] control thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:39,555 | INFO     | all job control threads have been joined
[2025-10-13 13:54:38] 2025-10-13 11:53:39,597 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:39,639 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:39,688 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:39,761 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:39,795 | INFO     | [job] validate thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:39,960 | INFO     | [payload] control thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:39,964 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:40,198 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:40,415 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:40,561 | INFO     | [job] control thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:40,821 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:43,043 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:53:48,327 | INFO     | job.realtimelogging is not enabled
[2025-10-13 13:54:38] 2025-10-13 11:53:49,333 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:54:38] 2025-10-13 11:54:07,201 | INFO     | PID=7395 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 13:54:38] 2025-10-13 11:54:07,202 | INFO     | .. there are 9 such processes running
[2025-10-13 13:54:38] 2025-10-13 11:54:07,203 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:54:38] 2025-10-13 11:54:07,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:54:38] 2025-10-13 11:54:07,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:54:38] 2025-10-13 11:54:27,363 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:54:38] 2025-10-13 11:54:29,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494311995200)>', '<ExcThread(monitor, started 140493883176704)>']
[2025-10-13 13:54:38] 2025-10-13 11:54:29,335 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:54:38] 2025-10-13 11:54:29,335 | INFO     | [monitor] control thread has ended
[2025-10-13 13:54:38] 2025-10-13 11:54:34,296 | INFO     | all workflow threads have been joined
[2025-10-13 13:54:38] 2025-10-13 11:54:34,296 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:54:38] 2025-10-13 11:54:34,297 | INFO     | traces error code: 0
[2025-10-13 13:54:38] 2025-10-13 11:54:34,297 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:54:38] 2025-10-13 11:54:34,577 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:54:38] 2025-10-13 11:54:34,646 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:54:38] 2025-10-13 11:54:34,716 [wrapper] pilotpid: 7395
[2025-10-13 13:54:38] 2025-10-13 11:54:34,862 [wrapper] Pilot exit status: 0
[2025-10-13 13:54:38] 2025-10-13 11:54:35,406 [wrapper] pandaids: 6840537101
[2025-10-13 13:54:38] 2025-10-13 11:54:36,302 [wrapper] cleanup supervisor_pilot 23796 7396
[2025-10-13 13:54:38] 2025-10-13 11:54:36,397 [wrapper] Test setup, not cleaning
[2025-10-13 13:54:38] 2025-10-13 11:54:36,496 [wrapper] apfmon messages muted
[2025-10-13 13:54:38] 2025-10-13 11:54:36,584 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:54:38] 2025-10-13 11:54:36,675 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:54:38]  *** Error codes and diagnostics ***
[2025-10-13 13:54:38]     "exeErrorCode": 0,
[2025-10-13 13:54:38]     "exeErrorDiag": "",
[2025-10-13 13:54:38]     "pilotErrorCode": 0,
[2025-10-13 13:54:38]     "pilotErrorDiag": "",
[2025-10-13 13:54:38]  *** Listing of results directory ***
[2025-10-13 13:54:39] total 413320
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc    557409 Oct 12 20:20 pilot3.tar.gz
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc      5112 Oct 12 20:43 queuedata.json
[2025-10-13 13:54:39] -rwx------. 1 boinc boinc     36292 Oct 12 20:44 runpilot2-wrapper.sh
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc       100 Oct 13 09:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:54:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 09:42 run_atlas
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc       105 Oct 13 09:42 job.xml
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc      6390 Oct 13 09:42 init_data.xml
[2025-10-13 13:54:39] -rw-r--r--. 2 boinc boinc 221800701 Oct 13 09:42 EVNT.46676267._004420.pool.root.1
[2025-10-13 13:54:39] -rw-r--r--. 2 boinc boinc     15120 Oct 13 09:42 start_atlas.sh
[2025-10-13 13:54:39] drwxrwx--x. 2 boinc boinc        68 Oct 13 09:42 shared
[2025-10-13 13:54:39] -rw-r--r--. 2 boinc boinc    569685 Oct 13 09:42 input.tar.gz
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc         0 Oct 13 09:42 boinc_lockfile
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc      2550 Oct 13 09:42 pandaJob.out
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc    972849 Oct 13 09:45 agis_schedconf.cvmfs.json
[2025-10-13 13:54:39] drwx------. 5 boinc boinc      4096 Oct 13 09:46 pilot3
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc 192636765 Oct 13 13:50 HITS.46676269._086520.pool.root.1
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc       531 Oct 13 13:50 boinc_task_state.xml
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc      1020 Oct 13 13:51 memory_monitor_summary.json
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc   1560580 Oct 13 13:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc    469669 Oct 13 13:51 log.46676269._086520.job.log.tgz.1
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc      7783 Oct 13 13:53 heartbeat.json
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc        95 Oct 13 13:54 pilot_heartbeat.json
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc      8192 Oct 13 13:54 boinc_mmap_file
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc        28 Oct 13 13:54 wrapper_checkpoint.txt
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc      5142 Oct 13 13:54 pilotlog.txt
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc   1988458 Oct 13 13:54 log.46676269._086520.job.log.1
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc       357 Oct 13 13:54 output.list
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc       620 Oct 13 13:54 runtime_log
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc   2478080 Oct 13 13:54 result.tar.gz
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc      8717 Oct 13 13:54 runtime_log.err
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc       656 Oct 13 13:54 gEgNDmxEGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmfhUMDmhMG3Nm.diag
[2025-10-13 13:54:39] -rw-r--r--. 1 boinc boinc     20652 Oct 13 13:54 stderr.txt
[2025-10-13 13:54:39] HITS file was successfully produced:
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc 192636765 Oct 13 13:50 shared/HITS.pool.root.1
[2025-10-13 13:54:39]  *** Contents of shared directory: ***
[2025-10-13 13:54:39] total 407724
[2025-10-13 13:54:39] -rw-r--r--. 2 boinc boinc 221800701 Oct 13 09:42 ATLAS.root_0
[2025-10-13 13:54:39] -rw-r--r--. 2 boinc boinc     15120 Oct 13 09:42 start_atlas.sh
[2025-10-13 13:54:39] -rw-r--r--. 2 boinc boinc    569685 Oct 13 09:42 input.tar.gz
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc 192636765 Oct 13 13:50 HITS.pool.root.1
[2025-10-13 13:54:39] -rw-------. 1 boinc boinc   2478080 Oct 13 13:54 result.tar.gz
13:54:40 (3590): run_atlas exited; CPU time 53776.399835
13:54:40 (3590): called boinc_finish(0)

</stderr_txt>
]]>

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