Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:15:30 (213902): wrapper (7.7.26015): starting
18:15:30 (213902): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:15:30] Arguments: --nthreads 8
[2025-10-12 18:15:30] Threads: 8
[2025-10-12 18:15:30] Checking for CVMFS
[2025-10-12 18:15:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:15:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:15:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:15:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:15:31] 2.13.2.0 3695926 129848 255048 151640 1 137 32922921 32935937 25800 16776704 0 217071461 99.572 251042626 29083 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 18:15:31] CVMFS is ok
[2025-10-12 18:15:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:15:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:15:31] Further information can be found at the LHC@home message board.
[2025-10-12 18:15:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:15:31] Checking for apptainer binary...
[2025-10-12 18:15:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:15:31] Running /usr/bin/apptainer --version
[2025-10-12 18:15:31] apptainer version 1.4.3-1.el9
[2025-10-12 18:15:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:15:51] c6-4-5-3.aglt2.org
[2025-10-12 18:15:51] apptainer works
[2025-10-12 18:15:51] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:15:51] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:15:51] Starting ATLAS job with PandaID=6840537536
[2025-10-12 18:15:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:46:30 (1478454): wrapper (7.7.26015): starting
23:46:30 (1478454): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 23:46:30] Arguments: --nthreads 10
[2025-10-12 23:46:30] Threads: 10
[2025-10-12 23:46:30] This job has been restarted, cleaning up previous attempt
[2025-10-12 23:46:30] Checking for CVMFS
[2025-10-12 23:46:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:46:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:46:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:46:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:46:30] 2.13.2.0 3695926 130179 257944 151647 3 447 18505337 32935936 24511 16776704 0 218107864 99.574 251316573 29093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 23:46:30] CVMFS is ok
[2025-10-12 23:46:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:46:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:46:30] Further information can be found at the LHC@home message board.
[2025-10-12 23:46:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:46:30] Checking for apptainer binary...
[2025-10-12 23:46:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:46:30] Running /usr/bin/apptainer --version
[2025-10-12 23:46:30] apptainer version 1.4.3-1.el9
[2025-10-12 23:46:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:46:31] c6-4-5-3.aglt2.org
[2025-10-12 23:46:31] apptainer works
[2025-10-12 23:46:31] Set ATHENA_PROC_NUMBER=10
[2025-10-12 23:46:31] Set ATHENA_CORE_NUMBER=10
[2025-10-12 23:46:31] Starting ATLAS job with PandaID=6840537536
[2025-10-12 23:46:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:00:10]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:00:10] 2025-10-13 10:59:11,155 | INFO     | intersect: -16840877806.069044
[2025-10-13 07:00:10] 2025-10-13 10:59:11,155 | INFO     | chi2: 2.4571605350406154
[2025-10-13 07:00:10] 2025-10-13 10:59:11,155 | INFO     | current chi2=2.4571605350406154 (change=1.5246300954119492 %)
[2025-10-13 07:00:10] 2025-10-13 10:59:11,155 | INFO     | right removable region: 418
[2025-10-13 07:00:10] 2025-10-13 10:59:11,156 | INFO     | sum of square deviations: 22809036964.66799
[2025-10-13 07:00:10] 2025-10-13 10:59:11,158 | INFO     | sum of deviations: 139035858584.02383
[2025-10-13 07:00:10] 2025-10-13 10:59:11,159 | INFO     | mean x: 1760340317.785203
[2025-10-13 07:00:10] 2025-10-13 10:59:11,159 | INFO     | mean y: 2190634.7780429595
[2025-10-13 07:00:10] 2025-10-13 10:59:11,159 | INFO     | -- intersect: -10728224150.487381
[2025-10-13 07:00:10] 2025-10-13 10:59:11,159 | INFO     | intersect: -10728224150.487381
[2025-10-13 07:00:10] 2025-10-13 10:59:11,159 | INFO     | chi2: 0.7897795681941722
[2025-10-13 07:00:10] 2025-10-13 10:59:11,159 | INFO     | current chi2=0.7897795681941722 (change=68.34808551907604 %)
[2025-10-13 07:00:10] 2025-10-13 10:59:11,160 | INFO     | sum of square deviations: 22002116549.217644
[2025-10-13 07:00:10] 2025-10-13 10:59:11,162 | INFO     | sum of deviations: 107462389745.68121
[2025-10-13 07:00:10] 2025-10-13 10:59:11,162 | INFO     | mean x: 1760340470.289855
[2025-10-13 07:00:10] 2025-10-13 10:59:11,162 | INFO     | mean y: 2196602.5193236717
[2025-10-13 07:00:10] 2025-10-13 10:59:11,162 | INFO     | -- intersect: -8595630487.443562
[2025-10-13 07:00:10] 2025-10-13 10:59:11,162 | INFO     | intersect: -8595630487.443562
[2025-10-13 07:00:10] 2025-10-13 10:59:11,163 | INFO     | chi2: 0.5783337965985814
[2025-10-13 07:00:10] 2025-10-13 10:59:11,163 | INFO     | current chi2=0.5783337965985814 (change=26.772757882184855 %)
[2025-10-13 07:00:10] 2025-10-13 10:59:11,163 | INFO     | sum of square deviations: 21214427298.1565
[2025-10-13 07:00:10] 2025-10-13 10:59:11,166 | INFO     | sum of deviations: 77706562675.69444
[2025-10-13 07:00:10] 2025-10-13 10:59:11,166 | INFO     | mean x: 1760340622.797066
[2025-10-13 07:00:10] 2025-10-13 10:59:11,166 | INFO     | mean y: 2202365.91198044
[2025-10-13 07:00:10] 2025-10-13 10:59:11,166 | INFO     | -- intersect: -6445768961.027306
[2025-10-13 07:00:10] 2025-10-13 10:59:11,166 | INFO     | intersect: -6445768961.027306
[2025-10-13 07:00:10] 2025-10-13 10:59:11,166 | INFO     | chi2: 0.3788656471708862
[2025-10-13 07:00:10] 2025-10-13 10:59:11,167 | INFO     | current chi2=0.3788656471708862 (change=34.49014230204932 %)
[2025-10-13 07:00:10] 2025-10-13 10:59:11,167 | INFO     | sum of square deviations: 20445761781.551968
[2025-10-13 07:00:10] 2025-10-13 10:59:11,169 | INFO     | sum of deviations: 51116645248.67573
[2025-10-13 07:00:10] 2025-10-13 10:59:11,170 | INFO     | mean x: 1760340775.3044555
[2025-10-13 07:00:10] 2025-10-13 10:59:11,170 | INFO     | mean y: 2207633.457920792
[2025-10-13 07:00:10] 2025-10-13 10:59:11,170 | INFO     | -- intersect: -4398837232.92643
[2025-10-13 07:00:10] 2025-10-13 10:59:11,170 | INFO     | intersect: -4398837232.92643
[2025-10-13 07:00:10] 2025-10-13 10:59:11,170 | INFO     | chi2: 0.20501774305365608
[2025-10-13 07:00:10] 2025-10-13 10:59:11,170 | INFO     | current chi2=0.20501774305365608 (change=45.88642581226599 %)
[2025-10-13 07:00:10] 2025-10-13 10:59:11,171 | INFO     | sum of square deviations: 19695911837.52386
[2025-10-13 07:00:10] 2025-10-13 10:59:11,173 | INFO     | sum of deviations: 45956603246.19044
[2025-10-13 07:00:10] 2025-10-13 10:59:11,173 | INFO     | mean x: 1760340927.8095238
[2025-10-13 07:00:10] 2025-10-13 10:59:11,173 | INFO     | mean y: 2208685.528822055
[2025-10-13 07:00:10] 2025-10-13 10:59:11,173 | INFO     | -- intersect: -4105206612.8706646
[2025-10-13 07:00:10] 2025-10-13 10:59:11,173 | INFO     | intersect: -4105206612.8706646
[2025-10-13 07:00:10] 2025-10-13 10:59:11,174 | INFO     | chi2: 0.19879878773664442
[2025-10-13 07:00:10] 2025-10-13 10:59:11,174 | INFO     | current chi2=0.19879878773664442 (change=3.033374196975759 %)
[2025-10-13 07:00:10] 2025-10-13 10:59:11,174 | INFO     | left removable region: 50
[2025-10-13 07:00:10] 2025-10-13 10:59:11,174 | INFO     | sum of square deviations: 15452462318.16302
[2025-10-13 07:00:10] 2025-10-13 10:59:11,176 | INFO     | sum of deviations: 27501700308.472836
[2025-10-13 07:00:10] 2025-10-13 10:59:11,176 | INFO     | mean x: 1760341507.3206522
[2025-10-13 07:00:10] 2025-10-13 10:59:11,176 | INFO     | mean y: 2216048.529891304
[2025-10-13 07:00:10] 2025-10-13 10:59:11,176 | INFO     | -- intersect: -3130772311.3895106
[2025-10-13 07:00:10] 2025-10-13 10:59:11,176 | INFO     | intersect: -3130772311.3895106
[2025-10-13 07:00:10] 2025-10-13 10:59:11,177 | INFO     | chi2: 0.1406601995017616
[2025-10-13 07:00:10] 2025-10-13 10:59:11,177 | INFO     | -- intersect: -3130772311.3895106
[2025-10-13 07:00:10] 2025-10-13 10:59:11,177 | INFO     | current memory leak: 1.78 B/s (using 368 data points, chi2=0.14)
[2025-10-13 07:00:10] 2025-10-13 10:59:11,178 | INFO     | could have reported an average CPU frequency of 2871 MHz (18 samples)
[2025-10-13 07:00:10] 2025-10-13 10:59:11,178 | INFO     | ..............................
[2025-10-13 07:00:10] 2025-10-13 10:59:11,178 | INFO     | . Timing measurements:
[2025-10-13 07:00:10] 2025-10-13 10:59:11,178 | INFO     | . get job = 0 s
[2025-10-13 07:00:10] 2025-10-13 10:59:11,178 | INFO     | . initial setup = 3 s
[2025-10-13 07:00:10] 2025-10-13 10:59:11,178 | INFO     | . payload setup = 12 s
[2025-10-13 07:00:10] 2025-10-13 10:59:11,178 | INFO     | . stage-in = 0 s
[2025-10-13 07:00:10] 2025-10-13 10:59:11,178 | INFO     | . payload execution = 25873 s
[2025-10-13 07:00:10] 2025-10-13 10:59:11,178 | INFO     | . stage-out = 5 s
[2025-10-13 07:00:10] 2025-10-13 10:59:11,178 | INFO     | . log creation = 0 s
[2025-10-13 07:00:10] 2025-10-13 10:59:11,178 | INFO     | ..............................
[2025-10-13 07:00:10] 2025-10-13 10:59:11,256 | INFO     | 
[2025-10-13 07:00:10] 2025-10-13 10:59:11,256 | INFO     | job summary report
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | --------------------------------------------------
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | PanDA job id: 6840537536
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | task id: 46676269
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | errors: (none)
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | pilot state: finished 
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | transexitcode: 0
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | exeerrorcode: 0
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | exeerrordiag: 
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | exitcode: 0
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | exitmsg: OK
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | cpuconsumptiontime: 40629 s
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | nevents: 400
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | neventsw: 0
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | pid: 1509435
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | pgrp: 1509435
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | corecount: 10
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | event service: False
[2025-10-13 07:00:10] 2025-10-13 10:59:11,257 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348913, 11: 2349175, 13: 2349203, 25889: 2385407, 25896: 2394461, 25916: 2394599}
[2025-10-13 07:00:10] 2025-10-13 10:59:11,258 | INFO     | --------------------------------------------------
[2025-10-13 07:00:10] 2025-10-13 10:59:11,258 | INFO     | 
[2025-10-13 07:00:10] 2025-10-13 10:59:11,258 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,275 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,276 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:00:10] 2025-10-13 10:59:11,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,276 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:00:10] 2025-10-13 10:59:11,276 | INFO     | job 6840537536 has completed (purged errors)
[2025-10-13 07:00:10] 2025-10-13 10:59:11,276 | INFO     | overall cleanup function is called
[2025-10-13 07:00:10] 2025-10-13 10:59:12,291 | INFO     | --- collectZombieJob: --- 10, [1509435]
[2025-10-13 07:00:10] 2025-10-13 10:59:12,291 | INFO     | zombie collector waiting for pid 1509435
[2025-10-13 07:00:10] 2025-10-13 10:59:12,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:00:10] 2025-10-13 10:59:12,291 | INFO     | collected zombie processes
[2025-10-13 07:00:10] 2025-10-13 10:59:12,291 | INFO     | will attempt to kill all subprocesses of pid=1509435
[2025-10-13 07:00:10] 2025-10-13 10:59:12,778 | INFO     | process IDs to be killed: [1509435] (in reverse order)
[2025-10-13 07:00:10] 2025-10-13 10:59:12,919 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:00:10] 2025-10-13 10:59:12,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:00:10] 2025-10-13 10:59:12,950 | INFO     | did not find any defunct processes belonging to 1509435
[2025-10-13 07:00:10] 2025-10-13 10:59:13,011 | INFO     | did not find any defunct processes belonging to 1509435
[2025-10-13 07:00:10] 2025-10-13 10:59:13,012 | INFO     | ready for new job
[2025-10-13 07:00:10] 2025-10-13 10:59:13,012 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:00:10] 2025-10-13 10:59:13,014 | INFO     | ***************************************
[2025-10-13 07:00:10] 2025-10-13 10:59:13,014 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:00:10] 2025-10-13 10:59:13,014 | INFO     | ***************************************
[2025-10-13 07:00:10] 2025-10-13 10:59:13,014 | INFO     | 
[2025-10-13 07:00:10] 2025-10-13 10:59:13,031 | INFO     | architecture information:
[2025-10-13 07:00:10] 2025-10-13 10:59:13,050 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:00:10] 2025-10-13 10:59:13,097 | INFO     | cat /etc/os-release:
[2025-10-13 07:00:10] NAME="CentOS Linux"
[2025-10-13 07:00:10] VERSION="7 (Core)"
[2025-10-13 07:00:10] ID="centos"
[2025-10-13 07:00:10] ID_LIKE="rhel fedora"
[2025-10-13 07:00:10] VERSION_ID="7"
[2025-10-13 07:00:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:00:10] ANSI_COLOR="0;31"
[2025-10-13 07:00:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:00:10] HOME_URL="https://www.centos.org/"
[2025-10-13 07:00:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:00:10] 
[2025-10-13 07:00:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:00:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:00:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:00:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:00:10] 
[2025-10-13 07:00:10] 2025-10-13 10:59:13,098 | INFO     | ***************************************
[2025-10-13 07:00:10] 2025-10-13 10:59:13,601 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 07:00:10] 2025-10-13 10:59:13,648 | INFO     | sufficient remaining disk space (75431411712 B)
[2025-10-13 07:00:10] 2025-10-13 10:59:13,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:00:10] 2025-10-13 10:59:13,648 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:00:10] 2025-10-13 10:59:13,649 | INFO     | update_server=False
[2025-10-13 07:00:10] 2025-10-13 10:59:13,649 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:00:10] 2025-10-13 10:59:14,248 | INFO     | all payload control threads have been joined
[2025-10-13 07:00:10] 2025-10-13 10:59:14,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:00:10] 2025-10-13 10:59:14,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:00:10] 2025-10-13 10:59:14,496 | INFO     | aborting loop
[2025-10-13 07:00:10] 2025-10-13 10:59:14,655 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:14,681 | INFO     | all data control threads have been joined
[2025-10-13 07:00:10] 2025-10-13 10:59:14,867 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:14,898 | INFO     | all job control threads have been joined
[2025-10-13 07:00:10] 2025-10-13 10:59:14,934 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:14,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:15,011 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:15,254 | INFO     | [payload] control thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:15,321 | INFO     | [job] validate thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:15,321 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:15,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:00:10] 2025-10-13 10:59:15,412 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:15,502 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:15,558 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:15,687 | INFO     | [data] control thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:15,905 | INFO     | [job] control thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:16,257 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:16,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:00:10] 2025-10-13 10:59:17,280 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:19,359 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:00:10] 2025-10-13 10:59:42,487 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:00:10] 2025-10-13 10:59:44,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098424350528)>', '<ExcThread(monitor, started 140097789875968)>']
[2025-10-13 07:00:10] 2025-10-13 10:59:44,811 | INFO     | PID=1489532 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:00:10] 2025-10-13 10:59:44,811 | INFO     | .. there are 33 such processes running
[2025-10-13 07:00:10] 2025-10-13 10:59:44,812 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:00:10] 2025-10-13 10:59:44,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:00:10] 2025-10-13 10:59:44,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:00:10] 2025-10-13 10:59:44,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:00:10] 2025-10-13 10:59:44,812 | INFO     | [monitor] control thread has ended
[2025-10-13 07:00:10] 2025-10-13 10:59:49,526 | INFO     | all workflow threads have been joined
[2025-10-13 07:00:10] 2025-10-13 10:59:49,526 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:00:10] 2025-10-13 10:59:49,526 | INFO     | traces error code: 0
[2025-10-13 07:00:10] 2025-10-13 10:59:49,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:00:10] 2025-10-13 10:59:49,696 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:00:10] 2025-10-13 10:59:49,698 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:00:10] 2025-10-13 10:59:49,700 [wrapper] pilotpid: 1489532
[2025-10-13 07:00:10] 2025-10-13 10:59:49,703 [wrapper] Pilot exit status: 0
[2025-10-13 07:00:10] 2025-10-13 10:59:49,788 [wrapper] pandaids: 6840537536 6840537536
[2025-10-13 07:00:10] 2025-10-13 10:59:50,056 [wrapper] cleanup supervisor_pilot 3395284 1489533
[2025-10-13 07:00:10] 2025-10-13 10:59:50,077 [wrapper] Test setup, not cleaning
[2025-10-13 07:00:10] 2025-10-13 10:59:50,100 [wrapper] apfmon messages muted
[2025-10-13 07:00:10] 2025-10-13 10:59:50,156 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:00:10] 2025-10-13 10:59:50,206 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:00:10]  *** Error codes and diagnostics ***
[2025-10-13 07:00:10]     "exeErrorCode": 0,
[2025-10-13 07:00:10]     "exeErrorDiag": "",
[2025-10-13 07:00:10]     "pilotErrorCode": 0,
[2025-10-13 07:00:10]     "pilotErrorDiag": "",
[2025-10-13 07:00:10]  *** Listing of results directory ***
[2025-10-13 07:00:10] total 628384
[2025-10-13 07:00:10] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-13 07:00:10] -rwx------. 1 boincer umatlas     36292 Oct 12 14:53 runpilot2-wrapper.sh
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:53 queuedata.json
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:00:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:15 run_atlas
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:15 job.xml
[2025-10-13 07:00:10] -rw-r--r--. 3 boincer umatlas 220369115 Oct 12 18:15 EVNT.46676267._004427.pool.root.1
[2025-10-13 07:00:10] -rw-r--r--. 3 boincer umatlas 220369115 Oct 12 18:15 ATLAS.root_0
[2025-10-13 07:00:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:15 start_atlas.sh
[2025-10-13 07:00:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:15 shared
[2025-10-13 07:00:10] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 18:15 input.tar.gz
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:15 boinc_lockfile
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 23:46 pandaJob.out
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas    974373 Oct 12 23:46 agis_schedconf.cvmfs.json
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas      6856 Oct 13 06:56 init_data.xml
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas       531 Oct 13 06:57 boinc_task_state.xml
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas 191540209 Oct 13 06:57 HITS.46676269._086683.pool.root.1
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas      1055 Oct 13 06:58 memory_monitor_summary.json
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas    615157 Oct 13 06:58 log.46676269._086683.job.log.tgz.1
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas      7850 Oct 13 06:59 heartbeat.json
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas        96 Oct 13 06:59 pilot_heartbeat.json
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas      4824 Oct 13 06:59 pilotlog.txt
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas   3018914 Oct 13 06:59 log.46676269._086683.job.log.1
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas       357 Oct 13 06:59 output.list
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:59 runtime_log
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas   3655680 Oct 13 06:59 result.tar.gz
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas      8791 Oct 13 06:59 runtime_log.err
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas       786 Oct 13 06:59 B1XKDmyMGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6iUMDmoq9gMo.diag
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:00 boinc_mmap_file
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas        28 Oct 13 07:00 wrapper_checkpoint.txt
[2025-10-13 07:00:10] -rw-r--r--. 1 boincer umatlas     23193 Oct 13 07:00 stderr.txt
[2025-10-13 07:00:10] HITS file was successfully produced:
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas 191540209 Oct 13 06:57 shared/HITS.pool.root.1
[2025-10-13 07:00:10]  *** Contents of shared directory: ***
[2025-10-13 07:00:10] total 406416
[2025-10-13 07:00:10] -rw-r--r--. 3 boincer umatlas 220369115 Oct 12 18:15 ATLAS.root_0
[2025-10-13 07:00:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:15 start_atlas.sh
[2025-10-13 07:00:10] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 18:15 input.tar.gz
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas 191540209 Oct 13 06:57 HITS.pool.root.1
[2025-10-13 07:00:10] -rw-------. 1 boincer umatlas   3655680 Oct 13 06:59 result.tar.gz
07:00:12 (1478454): run_atlas exited; CPU time 41533.349430
07:00:12 (1478454): called boinc_finish(0)

</stderr_txt>
]]>

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