Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:32:38 (6811): wrapper (7.7.26015): starting
12:32:38 (6811): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 12:32:38] Arguments: --nthreads 8
[2025-10-13 12:32:38] Threads: 8
[2025-10-13 12:32:38] Checking for CVMFS
[2025-10-13 12:32:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:32:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:32:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:32:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:32:41] 2.11.2.0 32329 221844 142348 151658 1 125 24538726 25165824 4585 130560 0 120318863 99.885 70206288 3309 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 12:32:41] CVMFS is ok
[2025-10-13 12:32:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:32:41] Checking for apptainer binary...
[2025-10-13 12:32:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 12:32:41] Running /usr/bin/apptainer --version
[2025-10-13 12:32:41] apptainer version 1.3.2-1.el7
[2025-10-13 12:32:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:32:48] cg-vwn362.simple-grid.lan
[2025-10-13 12:32:48] apptainer works
[2025-10-13 12:32:48] Set ATHENA_PROC_NUMBER=8
[2025-10-13 12:32:48] Set ATHENA_CORE_NUMBER=8
[2025-10-13 12:32:48] Starting ATLAS job with PandaID=6840182303
[2025-10-13 12:32:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:54:03]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:54:03] 2025-10-13 14:53:28,608 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:54:03] 2025-10-13 14:53:28,608 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:54:03] 2025-10-13 14:53:28,620 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:54:03] 2025-10-13 14:53:28,621 | INFO     | sum of square deviations: 4504437945.0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,623 | INFO     | sum of deviations: 98181942074.0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,623 | INFO     | mean x: 1760359660.5
[2025-10-13 16:54:03] 2025-10-13 14:53:28,624 | INFO     | mean y: 2433399.4590163934
[2025-10-13 16:54:03] 2025-10-13 14:53:28,624 | INFO     | -- intersect: -38367621272.61557
[2025-10-13 16:54:03] 2025-10-13 14:53:28,624 | INFO     | intersect: -38367621272.61557
[2025-10-13 16:54:03] 2025-10-13 14:53:28,624 | INFO     | chi2: 6.6688229025512
[2025-10-13 16:54:03] 2025-10-13 14:53:28,625 | INFO     | sum of square deviations: 4233158440.0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,627 | INFO     | sum of deviations: 112093339041.99998
[2025-10-13 16:54:03] 2025-10-13 14:53:28,627 | INFO     | mean x: 1760359508.0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,627 | INFO     | mean y: 2441068.59832636
[2025-10-13 16:54:03] 2025-10-13 14:53:28,628 | INFO     | -- intersect: -46611589084.74795
[2025-10-13 16:54:03] 2025-10-13 14:53:28,628 | INFO     | intersect: -46611589084.74795
[2025-10-13 16:54:03] 2025-10-13 14:53:28,628 | INFO     | chi2: 5.949753324433912
[2025-10-13 16:54:03] 2025-10-13 14:53:28,628 | INFO     | current chi2=5.949753324433912 (change=10.782556211564758 %)
[2025-10-13 16:54:03] 2025-10-13 14:53:28,628 | INFO     | right removable region: 238
[2025-10-13 16:54:03] 2025-10-13 14:53:28,629 | INFO     | sum of square deviations: 4233158440.0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,631 | INFO     | sum of deviations: 16199928599.99999
[2025-10-13 16:54:03] 2025-10-13 14:53:28,631 | INFO     | mean x: 1760359813.0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,631 | INFO     | mean y: 2479446.9916317994
[2025-10-13 16:54:03] 2025-10-13 14:53:28,632 | INFO     | -- intersect: -6734264212.645482
[2025-10-13 16:54:03] 2025-10-13 14:53:28,632 | INFO     | intersect: -6734264212.645482
[2025-10-13 16:54:03] 2025-10-13 14:53:28,632 | INFO     | chi2: 2.1428152750440175
[2025-10-13 16:54:03] 2025-10-13 14:53:28,632 | INFO     | current chi2=2.1428152750440175 (change=67.8681634471914 %)
[2025-10-13 16:54:03] 2025-10-13 14:53:28,633 | INFO     | sum of square deviations: 3972995422.5
[2025-10-13 16:54:03] 2025-10-13 14:53:28,642 | INFO     | sum of deviations: -23089963512.0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,642 | INFO     | mean x: 1760359965.5
[2025-10-13 16:54:03] 2025-10-13 14:53:28,642 | INFO     | mean y: 2502330.0256410255
[2025-10-13 16:54:03] 2025-10-13 14:53:28,643 | INFO     | -- intersect: 10233233314.810856
[2025-10-13 16:54:03] 2025-10-13 14:53:28,643 | INFO     | intersect: 10233233314.810856
[2025-10-13 16:54:03] 2025-10-13 14:53:28,643 | INFO     | chi2: 0.8787077569595184
[2025-10-13 16:54:03] 2025-10-13 14:53:28,643 | INFO     | current chi2=0.8787077569595184 (change=58.99283679777445 %)
[2025-10-13 16:54:03] 2025-10-13 14:53:28,644 | INFO     | sum of square deviations: 3723716330.0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,646 | INFO     | sum of deviations: -18357516290.0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,646 | INFO     | mean x: 1760360118.0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,646 | INFO     | mean y: 2499408.5895196507
[2025-10-13 16:54:03] 2025-10-13 14:53:28,646 | INFO     | -- intersect: 8680883226.953934
[2025-10-13 16:54:03] 2025-10-13 14:53:28,646 | INFO     | intersect: 8680883226.953934
[2025-10-13 16:54:03] 2025-10-13 14:53:28,647 | INFO     | chi2: 0.858939918580632
[2025-10-13 16:54:03] 2025-10-13 14:53:28,647 | INFO     | current chi2=0.858939918580632 (change=2.24964878508488 %)
[2025-10-13 16:54:03] 2025-10-13 14:53:28,647 | INFO     | left removable region: 30
[2025-10-13 16:54:03] 2025-10-13 14:53:28,648 | INFO     | sum of square deviations: 2790348132.0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,649 | INFO     | sum of deviations: 6592360219.000002
[2025-10-13 16:54:03] 2025-10-13 14:53:28,650 | INFO     | mean x: 1760360392.5
[2025-10-13 16:54:03] 2025-10-13 14:53:28,650 | INFO     | mean y: 2502609.144230769
[2025-10-13 16:54:03] 2025-10-13 14:53:28,650 | INFO     | -- intersect: -4156451497.525721
[2025-10-13 16:54:03] 2025-10-13 14:53:28,650 | INFO     | intersect: -4156451497.525721
[2025-10-13 16:54:03] 2025-10-13 14:53:28,650 | INFO     | chi2: 0.0009450786221219251
[2025-10-13 16:54:03] 2025-10-13 14:53:28,651 | INFO     | -- intersect: -4156451497.525721
[2025-10-13 16:54:03] 2025-10-13 14:53:28,651 | INFO     | current memory leak: 2.36 B/s (using 208 data points, chi2=0.00)
[2025-10-13 16:54:03] 2025-10-13 14:53:28,651 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 16:54:03] 2025-10-13 14:53:28,652 | INFO     | ..............................
[2025-10-13 16:54:03] 2025-10-13 14:53:28,652 | INFO     | . Timing measurements:
[2025-10-13 16:54:03] 2025-10-13 14:53:28,652 | INFO     | . get job = 0 s
[2025-10-13 16:54:03] 2025-10-13 14:53:28,652 | INFO     | . initial setup = 8 s
[2025-10-13 16:54:03] 2025-10-13 14:53:28,652 | INFO     | . payload setup = 116 s
[2025-10-13 16:54:03] 2025-10-13 14:53:28,652 | INFO     | . stage-in = 0 s
[2025-10-13 16:54:03] 2025-10-13 14:53:28,652 | INFO     | . payload execution = 15022 s
[2025-10-13 16:54:03] 2025-10-13 14:53:28,652 | INFO     | . stage-out = 5 s
[2025-10-13 16:54:03] 2025-10-13 14:53:28,653 | INFO     | . log creation = 1 s
[2025-10-13 16:54:03] 2025-10-13 14:53:28,653 | INFO     | ..............................
[2025-10-13 16:54:03] 2025-10-13 14:53:28,802 | INFO     | 
[2025-10-13 16:54:03] 2025-10-13 14:53:28,802 | INFO     | job summary report
[2025-10-13 16:54:03] 2025-10-13 14:53:28,803 | INFO     | --------------------------------------------------
[2025-10-13 16:54:03] 2025-10-13 14:53:28,803 | INFO     | PanDA job id: 6840182303
[2025-10-13 16:54:03] 2025-10-13 14:53:28,803 | INFO     | task id: 46676269
[2025-10-13 16:54:03] 2025-10-13 14:53:28,803 | INFO     | errors: (none)
[2025-10-13 16:54:03] 2025-10-13 14:53:28,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:54:03] 2025-10-13 14:53:28,803 | INFO     | pilot state: finished 
[2025-10-13 16:54:03] 2025-10-13 14:53:28,803 | INFO     | transexitcode: 0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,803 | INFO     | exeerrorcode: 0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,804 | INFO     | exeerrordiag: 
[2025-10-13 16:54:03] 2025-10-13 14:53:28,804 | INFO     | exitcode: 0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,804 | INFO     | exitmsg: OK
[2025-10-13 16:54:03] 2025-10-13 14:53:28,804 | INFO     | cpuconsumptiontime: 55796 s
[2025-10-13 16:54:03] 2025-10-13 14:53:28,804 | INFO     | nevents: 400
[2025-10-13 16:54:03] 2025-10-13 14:53:28,804 | INFO     | neventsw: 0
[2025-10-13 16:54:03] 2025-10-13 14:53:28,804 | INFO     | pid: 17172
[2025-10-13 16:54:03] 2025-10-13 14:53:28,804 | INFO     | pgrp: 17172
[2025-10-13 16:54:03] 2025-10-13 14:53:28,804 | INFO     | corecount: 8
[2025-10-13 16:54:03] 2025-10-13 14:53:28,804 | INFO     | event service: False
[2025-10-13 16:54:03] 2025-10-13 14:53:28,805 | INFO     | sizes: {0: 2348685, 1: 2348884, 12: 2348884, 22: 2348912, 33: 2348940, 44: 2348996, 55: 2349152, 65: 2349180, 76: 2349208, 87: 2349264, 94: 2349554, 98: 2349862, 1
[2025-10-13 16:54:03] 2025-10-13 14:53:28,805 | INFO     | --------------------------------------------------
[2025-10-13 16:54:03] 2025-10-13 14:53:28,805 | INFO     | 
[2025-10-13 16:54:03] 2025-10-13 14:53:28,805 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 16:54:03] 2025-10-13 14:53:29,249 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,250 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,250 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,250 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,251 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:54:03] 2025-10-13 14:53:29,251 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,251 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:54:03] 2025-10-13 14:53:29,252 | INFO     | job 6840182303 has completed (purged errors)
[2025-10-13 16:54:03] 2025-10-13 14:53:29,252 | INFO     | overall cleanup function is called
[2025-10-13 16:54:03] 2025-10-13 14:53:30,261 | INFO     | --- collectZombieJob: --- 10, [17172]
[2025-10-13 16:54:03] 2025-10-13 14:53:30,261 | INFO     | zombie collector waiting for pid 17172
[2025-10-13 16:54:03] 2025-10-13 14:53:30,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:54:03] 2025-10-13 14:53:30,261 | INFO     | collected zombie processes
[2025-10-13 16:54:03] 2025-10-13 14:53:30,261 | INFO     | will attempt to kill all subprocesses of pid=17172
[2025-10-13 16:54:03] 2025-10-13 14:53:30,386 | INFO     | process IDs to be killed: [17172] (in reverse order)
[2025-10-13 16:54:03] 2025-10-13 14:53:30,947 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:54:03] 2025-10-13 14:53:30,948 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:54:03] 2025-10-13 14:53:30,951 | INFO     | did not find any defunct processes belonging to 17172
[2025-10-13 16:54:03] 2025-10-13 14:53:30,958 | INFO     | did not find any defunct processes belonging to 17172
[2025-10-13 16:54:03] 2025-10-13 14:53:30,958 | INFO     | ready for new job
[2025-10-13 16:54:03] 2025-10-13 14:53:30,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:54:03] 2025-10-13 14:53:30,961 | INFO     | ***************************************
[2025-10-13 16:54:03] 2025-10-13 14:53:30,961 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:54:03] 2025-10-13 14:53:30,961 | INFO     | ***************************************
[2025-10-13 16:54:03] 2025-10-13 14:53:30,961 | INFO     | 
[2025-10-13 16:54:03] 2025-10-13 14:53:30,961 | INFO     | pilot is running in a VM
[2025-10-13 16:54:03] 2025-10-13 14:53:30,962 | INFO     | architecture information:
[2025-10-13 16:54:03] 2025-10-13 14:53:30,975 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:54:03] 2025-10-13 14:53:31,264 | INFO     | cat /etc/os-release:
[2025-10-13 16:54:03] NAME="CentOS Linux"
[2025-10-13 16:54:03] VERSION="7 (Core)"
[2025-10-13 16:54:03] ID="centos"
[2025-10-13 16:54:03] ID_LIKE="rhel fedora"
[2025-10-13 16:54:03] VERSION_ID="7"
[2025-10-13 16:54:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:54:03] ANSI_COLOR="0;31"
[2025-10-13 16:54:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:54:03] HOME_URL="https://www.centos.org/"
[2025-10-13 16:54:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:54:03] 
[2025-10-13 16:54:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:54:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:54:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:54:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:54:03] 
[2025-10-13 16:54:03] 2025-10-13 14:53:31,265 | INFO     | ***************************************
[2025-10-13 16:54:03] 2025-10-13 14:53:31,768 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 16:54:03] 2025-10-13 14:53:31,957 | INFO     | sufficient remaining disk space (495870541824 B)
[2025-10-13 16:54:03] 2025-10-13 14:53:31,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:54:03] 2025-10-13 14:53:31,958 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:54:03] 2025-10-13 14:53:31,958 | INFO     | update_server=False
[2025-10-13 16:54:03] 2025-10-13 14:53:31,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:54:03] 2025-10-13 14:53:32,010 | INFO     | all data control threads have been joined
[2025-10-13 16:54:03] 2025-10-13 14:53:32,070 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:54:03] 2025-10-13 14:53:32,070 | INFO     | aborting loop
[2025-10-13 16:54:03] 2025-10-13 14:53:32,411 | INFO     | all payload control threads have been joined
[2025-10-13 16:54:03] 2025-10-13 14:53:32,483 | INFO     | all job control threads have been joined
[2025-10-13 16:54:03] 2025-10-13 14:53:32,964 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:32,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:54:03] 2025-10-13 14:53:33,016 | INFO     | [data] control thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:33,027 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:33,076 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:33,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:54:03] 2025-10-13 14:53:33,153 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:33,352 | INFO     | [job] validate thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:33,417 | INFO     | [payload] control thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:33,489 | INFO     | [job] control thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:33,678 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:33,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:54:03] 2025-10-13 14:53:33,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:34,005 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:34,018 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:34,034 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:34,829 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:35,000 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:37,113 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:54:03] 2025-10-13 14:53:42,216 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:54:03] 2025-10-13 14:53:43,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180649412416)>', '<ExcThread(monitor, started 140180065343232)>']
[2025-10-13 16:54:03] 2025-10-13 14:53:48,622 | INFO     | all workflow threads have been joined
[2025-10-13 16:54:03] 2025-10-13 14:53:48,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:54:03] 2025-10-13 14:53:48,622 | INFO     | traces error code: 0
[2025-10-13 16:54:03] 2025-10-13 14:53:48,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:54:03] 2025-10-13 14:54:00,543 | INFO     | PID=10613 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 16:54:03] 2025-10-13 14:54:00,543 | INFO     | .. there are 9 such processes running
[2025-10-13 16:54:03] 2025-10-13 14:54:00,544 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:54:03] 2025-10-13 14:54:00,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:54:03] 2025-10-13 14:54:00,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:54:03] 2025-10-13 14:54:00,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:54:03] 2025-10-13 14:54:00,544 | INFO     | [monitor] control thread has ended
[2025-10-13 16:54:03] 2025-10-13 14:54:00,800 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:54:03] 2025-10-13 14:54:00,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:54:03] 2025-10-13 14:54:00,878 [wrapper] pilotpid: 10613
[2025-10-13 16:54:03] 2025-10-13 14:54:00,911 [wrapper] Pilot exit status: 0
[2025-10-13 16:54:03] 2025-10-13 14:54:01,226 [wrapper] pandaids: 6840182303
[2025-10-13 16:54:03] 2025-10-13 14:54:01,367 [wrapper] cleanup supervisor_pilot 27073 10614
[2025-10-13 16:54:03] 2025-10-13 14:54:01,472 [wrapper] Test setup, not cleaning
[2025-10-13 16:54:03] 2025-10-13 14:54:01,588 [wrapper] apfmon messages muted
[2025-10-13 16:54:03] 2025-10-13 14:54:01,681 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:54:03] 2025-10-13 14:54:01,782 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:54:03]  *** Error codes and diagnostics ***
[2025-10-13 16:54:03]     "exeErrorCode": 0,
[2025-10-13 16:54:03]     "exeErrorDiag": "",
[2025-10-13 16:54:03]     "pilotErrorCode": 0,
[2025-10-13 16:54:03]     "pilotErrorDiag": "",
[2025-10-13 16:54:03]  *** Listing of results directory ***
[2025-10-13 16:54:03] total 419316
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc    557409 Oct 12 16:30 pilot3.tar.gz
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc      5112 Oct 12 16:43 queuedata.json
[2025-10-13 16:54:03] -rwx------. 1 boinc boinc     36292 Oct 12 16:43 runpilot2-wrapper.sh
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc       100 Oct 13 12:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:54:03] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 12:32 run_atlas
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc       105 Oct 13 12:32 job.xml
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc      6390 Oct 13 12:32 init_data.xml
[2025-10-13 16:54:03] -rw-r--r--. 2 boinc boinc 220090915 Oct 13 12:32 EVNT.46676267._004531.pool.root.1
[2025-10-13 16:54:03] -rw-r--r--. 2 boinc boinc     15120 Oct 13 12:32 start_atlas.sh
[2025-10-13 16:54:03] drwxrwx--x. 2 boinc boinc        68 Oct 13 12:32 shared
[2025-10-13 16:54:03] -rw-r--r--. 2 boinc boinc    569683 Oct 13 12:32 input.tar.gz
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc         0 Oct 13 12:32 boinc_lockfile
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc      2549 Oct 13 12:32 pandaJob.out
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc    972497 Oct 13 12:36 agis_schedconf.cvmfs.json
[2025-10-13 16:54:03] drwx------. 5 boinc boinc      4096 Oct 13 12:36 pilot3
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc 200335937 Oct 13 16:50 HITS.46676269._081150.pool.root.1
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc       531 Oct 13 16:51 boinc_task_state.xml
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc      1018 Oct 13 16:51 memory_monitor_summary.json
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc   1560580 Oct 13 16:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc    471891 Oct 13 16:51 log.46676269._081150.job.log.tgz.1
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc        95 Oct 13 16:53 pilot_heartbeat.json
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc      7779 Oct 13 16:53 heartbeat.json
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc      8192 Oct 13 16:53 boinc_mmap_file
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc        28 Oct 13 16:53 wrapper_checkpoint.txt
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc       820 Oct 13 16:54 pilotlog.txt
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc   2062200 Oct 13 16:54 log.46676269._081150.job.log.1
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc       357 Oct 13 16:54 output.list
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc       620 Oct 13 16:54 runtime_log
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc   2549760 Oct 13 16:54 result.tar.gz
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc      8703 Oct 13 16:54 runtime_log.err
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc       656 Oct 13 16:54 0H3LDmZTCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmO9TMDm1aI7um.diag
[2025-10-13 16:54:03] -rw-r--r--. 1 boinc boinc     20600 Oct 13 16:54 stderr.txt
[2025-10-13 16:54:03] HITS file was successfully produced:
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc 200335937 Oct 13 16:50 shared/HITS.pool.root.1
[2025-10-13 16:54:03]  *** Contents of shared directory: ***
[2025-10-13 16:54:03] total 413648
[2025-10-13 16:54:03] -rw-r--r--. 2 boinc boinc 220090915 Oct 13 12:32 ATLAS.root_0
[2025-10-13 16:54:03] -rw-r--r--. 2 boinc boinc     15120 Oct 13 12:32 start_atlas.sh
[2025-10-13 16:54:03] -rw-r--r--. 2 boinc boinc    569683 Oct 13 12:32 input.tar.gz
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc 200335937 Oct 13 16:50 HITS.pool.root.1
[2025-10-13 16:54:03] -rw-------. 1 boinc boinc   2549760 Oct 13 16:54 result.tar.gz
16:54:05 (6811): run_atlas exited; CPU time 56010.491201
16:54:05 (6811): called boinc_finish(0)

</stderr_txt>
]]>

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