Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:52:26 (4023966): wrapper (7.7.26015): starting
14:52:26 (4023966): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 14:52:26] Arguments: --nthreads 6
[2025-10-13 14:52:26] Threads: 6
[2025-10-13 14:52:26] Checking for CVMFS
[2025-10-13 14:52:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:52:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:52:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:52:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:52:27] 2.12.7.0 249871 6915 97412 151650 2 57 14007461 20971520 929 130560 0 11743449 99.995 239312 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 14:52:27] CVMFS is ok
[2025-10-13 14:52:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:52:27] Checking for apptainer binary...
[2025-10-13 14:52:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:52:27] Running /usr/bin/apptainer --version
[2025-10-13 14:52:27] apptainer version 1.4.0-1.el9
[2025-10-13 14:52:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:52:27] testio005
[2025-10-13 14:52:27] apptainer works
[2025-10-13 14:52:27] Set ATHENA_PROC_NUMBER=6
[2025-10-13 14:52:27] Set ATHENA_CORE_NUMBER=6
[2025-10-13 14:52:27] Starting ATLAS job with PandaID=6829686070
[2025-10-13 14:52:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:11:55]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:11:55]  lfn=log.46376905._060327.job.log.tgz.1
[2025-10-13 16:11:55]  mtime=0
[2025-10-13 16:11:55]  protocol_id=None
[2025-10-13 16:11:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 16:11:55]  replicas=None
[2025-10-13 16:11:55]  scope=mc23_13p6TeV
[2025-10-13 16:11:55]  status=None
[2025-10-13 16:11:55]  status_code=0
[2025-10-13 16:11:55]  storage_token=
[2025-10-13 16:11:55]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6829686070/log.46376905._060327.job.log.tgz.1
[2025-10-13 16:11:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/b3/log.46376905._060327.job.log.tgz.1
[2025-10-13 16:11:55]  workdir=None
[2025-10-13 16:11:55] ]
[2025-10-13 16:11:55] 2025-10-13 07:11:13,662 | INFO     | transferring file log.46376905._060327.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6829686070/log.46376905._060327.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 16:11:55] 2025-10-13 07:11:13,662 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6829686070/log.46376905._060327.job.log.tgz.1 /var/lib/boinc/slots/1/log.46376905._060327.job
[2025-10-13 16:11:55] 2025-10-13 07:11:13,675 | INFO     | adding to output.list: log.46376905._060327.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/b3/log.46376905._060327.job.log.tg
[2025-10-13 16:11:55] 2025-10-13 07:11:13,675 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 16:11:55] 2025-10-13 07:11:13,675 | INFO     | summary of transferred files:
[2025-10-13 16:11:55] 2025-10-13 07:11:13,676 | INFO     |  -- lfn=log.46376905._060327.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 16:11:55] 2025-10-13 07:11:13,676 | INFO     | stage-out finished correctly
[2025-10-13 16:11:55] 2025-10-13 07:11:14,400 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 16:11:55] 2025-10-13 07:11:14,472 | INFO     | monitor loop #348: job 0:6829686070 is in state 'finished'
[2025-10-13 16:11:55] 2025-10-13 07:11:14,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 16:11:55] 2025-10-13 07:11:14,676 | INFO     | job 6829686070 has state=finished
[2025-10-13 16:11:55] 2025-10-13 07:11:14,676 | INFO     | preparing for final server update for job 6829686070 in state='finished'
[2025-10-13 16:11:55] 2025-10-13 07:11:14,676 | INFO     | this job has now completed (state=finished)
[2025-10-13 16:11:55] 2025-10-13 07:11:14,676 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 16:11:55] 2025-10-13 07:11:14,676 | INFO     | log transfer has been attempted: DONE
[2025-10-13 16:11:55] 2025-10-13 07:11:14,676 | INFO     | job 6829686070 has finished - writing final server update
[2025-10-13 16:11:55] 2025-10-13 07:11:14,676 | INFO     | total number of processed events: 400 (read)
[2025-10-13 16:11:55] 2025-10-13 07:11:14,677 | INFO     | executing command: lscpu
[2025-10-13 16:11:55] 2025-10-13 07:11:14,694 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 16:11:55] 2025-10-13 07:11:14,987 | INFO     | time since job start (4712s) is within the limit (172800.0s)
[2025-10-13 16:11:55] 2025-10-13 07:11:16,974 | INFO     | monitor loop #349: job 0:6829686070 is in state 'finished'
[2025-10-13 16:11:55] 2025-10-13 07:11:16,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 16:11:55] 2025-10-13 07:11:16,992 | INFO     | time since job start (4714s) is within the limit (172800.0s)
[2025-10-13 16:11:55] 2025-10-13 07:11:17,950 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 16:11:55] 2025-10-13 07:11:17,952 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3310.4779375
[2025-10-13 16:11:55] 2025-10-13 07:11:17,955 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6829686070/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:11:55] 2025-10-13 07:11:17,955 | INFO     | extracted standard info from prmon json
[2025-10-13 16:11:55] 2025-10-13 07:11:17,955 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 16:11:55] 2025-10-13 07:11:17,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 16:11:55] 2025-10-13 07:11:17,955 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:11:55] 2025-10-13 07:11:17,955 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:11:55] 2025-10-13 07:11:17,957 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:11:55] 2025-10-13 07:11:17,957 | INFO     | sum of square deviations: 106336877.5
[2025-10-13 16:11:55] 2025-10-13 07:11:17,957 | INFO     | sum of deviations: -8455364970.5
[2025-10-13 16:11:55] 2025-10-13 07:11:17,957 | INFO     | mean x: 1760337194.5
[2025-10-13 16:11:55] 2025-10-13 07:11:17,957 | INFO     | mean y: 2560493.0142857144
[2025-10-13 16:11:55] 2025-10-13 07:11:17,957 | INFO     | -- intersect: 139975576445.4861
[2025-10-13 16:11:55] 2025-10-13 07:11:17,957 | INFO     | intersect: 139975576445.4861
[2025-10-13 16:11:55] 2025-10-13 07:11:17,957 | INFO     | chi2: 0.0519874268111336
[2025-10-13 16:11:55] 2025-10-13 07:11:17,957 | INFO     | -- intersect: 139975576445.4861
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | current memory leak: -79.51 B/s (using 70 data points, chi2=0.05)
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | could have reported an average CPU frequency of 3321 MHz (6 samples)
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | ..............................
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | . Timing measurements:
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | . get job = 0 s
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | . initial setup = 8 s
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | . payload setup = 4 s
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | . stage-in = 0 s
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | . payload execution = 4687 s
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | . stage-out = 0 s
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | . log creation = 0 s
[2025-10-13 16:11:55] 2025-10-13 07:11:17,958 | INFO     | ..............................
[2025-10-13 16:11:55] 2025-10-13 07:11:18,020 | INFO     | 
[2025-10-13 16:11:55] 2025-10-13 07:11:18,020 | INFO     | job summary report
[2025-10-13 16:11:55] 2025-10-13 07:11:18,020 | INFO     | --------------------------------------------------
[2025-10-13 16:11:55] 2025-10-13 07:11:18,020 | INFO     | PanDA job id: 6829686070
[2025-10-13 16:11:55] 2025-10-13 07:11:18,020 | INFO     | task id: 46376905
[2025-10-13 16:11:55] 2025-10-13 07:11:18,021 | INFO     | errors: (none)
[2025-10-13 16:11:55] 2025-10-13 07:11:18,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:11:55] 2025-10-13 07:11:18,021 | INFO     | pilot state: finished 
[2025-10-13 16:11:55] 2025-10-13 07:11:18,021 | INFO     | transexitcode: 0
[2025-10-13 16:11:55] 2025-10-13 07:11:18,021 | INFO     | exeerrorcode: 0
[2025-10-13 16:11:55] 2025-10-13 07:11:18,021 | INFO     | exeerrordiag: 
[2025-10-13 16:11:55] 2025-10-13 07:11:18,021 | INFO     | exitcode: 0
[2025-10-13 16:11:55] 2025-10-13 07:11:18,021 | INFO     | exitmsg: OK
[2025-10-13 16:11:55] 2025-10-13 07:11:18,021 | INFO     | cpuconsumptiontime: 25797 s
[2025-10-13 16:11:55] 2025-10-13 07:11:18,021 | INFO     | nevents: 400
[2025-10-13 16:11:55] 2025-10-13 07:11:18,021 | INFO     | neventsw: 0
[2025-10-13 16:11:55] 2025-10-13 07:11:18,022 | INFO     | pid: 4034495
[2025-10-13 16:11:55] 2025-10-13 07:11:18,022 | INFO     | pgrp: 4034495
[2025-10-13 16:11:55] 2025-10-13 07:11:18,022 | INFO     | corecount: 6
[2025-10-13 16:11:55] 2025-10-13 07:11:18,022 | INFO     | event service: False
[2025-10-13 16:11:55] 2025-10-13 07:11:18,022 | INFO     | sizes: {0: 2348645, 1: 2348844, 4: 2349106, 11: 2349134, 4695: 2375352, 4696: 2384350, 4697: 2384534, 4701: 2384728}
[2025-10-13 16:11:55] 2025-10-13 07:11:18,022 | INFO     | --------------------------------------------------
[2025-10-13 16:11:55] 2025-10-13 07:11:18,022 | INFO     | 
[2025-10-13 16:11:55] 2025-10-13 07:11:18,022 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-13 16:11:55] 2025-10-13 07:11:18,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,037 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,037 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:11:55] 2025-10-13 07:11:18,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,039 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:11:55] 2025-10-13 07:11:18,039 | INFO     | job 6829686070 has completed (purged errors)
[2025-10-13 16:11:55] 2025-10-13 07:11:18,039 | INFO     | overall cleanup function is called
[2025-10-13 16:11:55] 2025-10-13 07:11:19,046 | INFO     | --- collectZombieJob: --- 10, [4034495]
[2025-10-13 16:11:55] 2025-10-13 07:11:19,046 | INFO     | zombie collector waiting for pid 4034495
[2025-10-13 16:11:55] 2025-10-13 07:11:19,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:11:55] 2025-10-13 07:11:19,046 | INFO     | collected zombie processes
[2025-10-13 16:11:55] 2025-10-13 07:11:19,046 | INFO     | will attempt to kill all subprocesses of pid=4034495
[2025-10-13 16:11:55] 2025-10-13 07:11:19,131 | INFO     | process IDs to be killed: [4034495] (in reverse order)
[2025-10-13 16:11:55] 2025-10-13 07:11:19,164 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:11:55] 2025-10-13 07:11:19,164 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:11:55] 2025-10-13 07:11:19,168 | INFO     | did not find any defunct processes belonging to 4034495
[2025-10-13 16:11:55] 2025-10-13 07:11:19,171 | INFO     | did not find any defunct processes belonging to 4034495
[2025-10-13 16:11:55] 2025-10-13 07:11:19,171 | INFO     | ready for new job
[2025-10-13 16:11:55] 2025-10-13 07:11:19,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:11:55] 2025-10-13 07:11:19,173 | INFO     | ***************************************
[2025-10-13 16:11:55] 2025-10-13 07:11:19,173 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 16:11:55] 2025-10-13 07:11:19,173 | INFO     | ***************************************
[2025-10-13 16:11:55] 2025-10-13 07:11:19,173 | INFO     | 
[2025-10-13 16:11:55] 2025-10-13 07:11:19,174 | INFO     | architecture information:
[2025-10-13 16:11:55] 2025-10-13 07:11:19,175 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:11:55] 2025-10-13 07:11:19,187 | INFO     | cat /etc/os-release:
[2025-10-13 16:11:55] NAME="CentOS Linux"
[2025-10-13 16:11:55] VERSION="7 (Core)"
[2025-10-13 16:11:55] ID="centos"
[2025-10-13 16:11:55] ID_LIKE="rhel fedora"
[2025-10-13 16:11:55] VERSION_ID="7"
[2025-10-13 16:11:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:11:55] ANSI_COLOR="0;31"
[2025-10-13 16:11:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:11:55] HOME_URL="https://www.centos.org/"
[2025-10-13 16:11:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:11:55] 
[2025-10-13 16:11:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:11:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:11:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:11:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:11:55] 
[2025-10-13 16:11:55] 2025-10-13 07:11:19,187 | INFO     | ***************************************
[2025-10-13 16:11:55] 2025-10-13 07:11:19,690 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-13 16:11:55] 2025-10-13 07:11:19,703 | INFO     | sufficient remaining disk space (96411320320 B)
[2025-10-13 16:11:55] 2025-10-13 07:11:19,703 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:11:55] 2025-10-13 07:11:19,703 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:11:55] 2025-10-13 07:11:19,703 | INFO     | update_server=False
[2025-10-13 16:11:55] 2025-10-13 07:11:19,704 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:11:55] 2025-10-13 07:11:19,704 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:11:55] 2025-10-13 07:11:19,704 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:11:55] 2025-10-13 07:11:20,149 | INFO     | all payload control threads have been joined
[2025-10-13 16:11:55] 2025-10-13 07:11:20,212 | INFO     | all data control threads have been joined
[2025-10-13 16:11:55] 2025-10-13 07:11:20,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:11:55] 2025-10-13 07:11:20,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:11:55] 2025-10-13 07:11:20,485 | INFO     | aborting loop
[2025-10-13 16:11:55] 2025-10-13 07:11:20,498 | INFO     | all job control threads have been joined
[2025-10-13 16:11:55] 2025-10-13 07:11:20,709 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:20,709 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:20,731 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:21,155 | INFO     | [payload] control thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:21,217 | INFO     | [data] control thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:21,286 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:21,339 | INFO     | [job] validate thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:21,414 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:21,491 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:21,504 | INFO     | [job] control thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:21,534 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:21,676 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:21,709 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:22,034 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:22,142 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:24,486 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:11:55] 2025-10-13 07:11:49,237 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:11:55] 2025-10-13 07:11:50,198 | INFO     | PID=4027742 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 16:11:55] 2025-10-13 07:11:50,198 | INFO     | .. there are 2 such processes running
[2025-10-13 16:11:55] 2025-10-13 07:11:50,198 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:11:55] 2025-10-13 07:11:50,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:11:55] 2025-10-13 07:11:50,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:11:55] 2025-10-13 07:11:50,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140164845778752)>', '<ExcThread(monitor, started 140164361869056)>']
[2025-10-13 16:11:55] 2025-10-13 07:11:51,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:11:55] 2025-10-13 07:11:51,204 | INFO     | [monitor] control thread has ended
[2025-10-13 16:11:55] 2025-10-13 07:11:55,260 | INFO     | all workflow threads have been joined
[2025-10-13 16:11:55] 2025-10-13 07:11:55,260 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:11:55] 2025-10-13 07:11:55,260 | INFO     | traces error code: 0
[2025-10-13 16:11:55] 2025-10-13 07:11:55,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:11:55] 2025-10-13 07:11:55,342 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:11:55] 2025-10-13 07:11:55,344 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:11:55] 2025-10-13 07:11:55,346 [wrapper] pilotpid: 4027742
[2025-10-13 16:11:55] 2025-10-13 07:11:55,348 [wrapper] Pilot exit status: 0
[2025-10-13 16:11:55] 2025-10-13 07:11:55,355 [wrapper] pandaids: 6829686070
[2025-10-13 16:11:55] 2025-10-13 07:11:55,378 [wrapper] cleanup supervisor_pilot 4071347 4027743
[2025-10-13 16:11:55] 2025-10-13 07:11:55,380 [wrapper] Test setup, not cleaning
[2025-10-13 16:11:55] 2025-10-13 07:11:55,382 [wrapper] apfmon messages muted
[2025-10-13 16:11:55] 2025-10-13 07:11:55,385 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:11:55] 2025-10-13 07:11:55,387 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:11:55]  *** Error codes and diagnostics ***
[2025-10-13 16:11:55]     "exeErrorCode": 0,
[2025-10-13 16:11:55]     "exeErrorDiag": "",
[2025-10-13 16:11:55]     "pilotErrorCode": 0,
[2025-10-13 16:11:55]     "pilotErrorDiag": "",
[2025-10-13 16:11:55]  *** Listing of results directory ***
[2025-10-13 16:11:55] total 389588
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc    552446 Oct  4 22:04 pilot3.tar.gz
[2025-10-13 16:11:55] -rwx------. 1 boinc boinc     36292 Oct  4 22:08 runpilot2-wrapper.sh
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc      5112 Oct  4 22:08 queuedata.json
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc       100 Oct 13 14:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:11:55] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 14:52 run_atlas
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc       105 Oct 13 14:52 job.xml
[2025-10-13 16:11:55] -rw-r--r--. 2 boinc boinc 215788479 Oct 13 14:52 EVNT.46376901._002172.pool.root.1
[2025-10-13 16:11:55] -rw-r--r--. 2 boinc boinc     15120 Oct 13 14:52 start_atlas.sh
[2025-10-13 16:11:55] drwxrwx--x. 2 boinc boinc        68 Oct 13 14:52 shared
[2025-10-13 16:11:55] -rw-r--r--. 2 boinc boinc    565596 Oct 13 14:52 input.tar.gz
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc      9362 Oct 13 14:52 init_data.xml
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc         0 Oct 13 14:52 boinc_lockfile
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc      2519 Oct 13 14:52 pandaJob.out
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc    973230 Oct 13 14:52 agis_schedconf.cvmfs.json
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc   1560580 Oct 13 14:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:11:55] drwx------. 4 boinc boinc      4096 Oct 13 14:52 pilot3
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc 177279046 Oct 13 16:10 HITS.46376905._060327.pool.root.1
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc      1019 Oct 13 16:11 memory_monitor_summary.json
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc       529 Oct 13 16:11 boinc_task_state.xml
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc    305235 Oct 13 16:11 log.46376905._060327.job.log.tgz.1
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc        95 Oct 13 16:11 pilot_heartbeat.json
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc      7757 Oct 13 16:11 heartbeat.json
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc        27 Oct 13 16:11 wrapper_checkpoint.txt
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc      8192 Oct 13 16:11 boinc_mmap_file
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc      4823 Oct 13 16:11 pilotlog.txt
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc    691014 Oct 13 16:11 log.46376905._060327.job.log.1
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc       357 Oct 13 16:11 output.list
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc       620 Oct 13 16:11 runtime_log
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc   1013760 Oct 13 16:11 result.tar.gz
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc      8661 Oct 13 16:11 runtime_log.err
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc       641 Oct 13 16:11 6xBLDmrAHP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuULNDmgUN6Gm.diag
[2025-10-13 16:11:55] -rw-r--r--. 1 boinc boinc     21315 Oct 13 16:11 stderr.txt
[2025-10-13 16:11:55] HITS file was successfully produced:
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc 177279046 Oct 13 16:10 shared/HITS.pool.root.1
[2025-10-13 16:11:55]  *** Contents of shared directory: ***
[2025-10-13 16:11:55] total 385424
[2025-10-13 16:11:55] -rw-r--r--. 2 boinc boinc 215788479 Oct 13 14:52 ATLAS.root_0
[2025-10-13 16:11:55] -rw-r--r--. 2 boinc boinc     15120 Oct 13 14:52 start_atlas.sh
[2025-10-13 16:11:55] -rw-r--r--. 2 boinc boinc    565596 Oct 13 14:52 input.tar.gz
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc 177279046 Oct 13 16:10 HITS.pool.root.1
[2025-10-13 16:11:55] -rw-------. 1 boinc boinc   1013760 Oct 13 16:11 result.tar.gz
16:11:57 (4023966): run_atlas exited; CPU time 25845.861367
16:11:57 (4023966): called boinc_finish(0)

</stderr_txt>
]]>

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