Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:12:49 (423885): wrapper (7.7.26015): starting
19:12:49 (423885): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:12:49] Arguments: --nthreads 8
[2025-10-12 19:12:49] Threads: 8
[2025-10-12 19:12:49] Checking for CVMFS
[2025-10-12 19:12:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:12:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:12:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:12:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:12:51] 2.13.2.0 360960 9159 207248 151640 3 425 22229199 32935937 23368 16776704 0 27034790 99.679 24114923 29302 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 19:12:51] CVMFS is ok
[2025-10-12 19:12:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:12:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:12:51] Further information can be found at the LHC@home message board.
[2025-10-12 19:12:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:12:51] Checking for apptainer binary...
[2025-10-12 19:12:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:12:51] Running /usr/bin/apptainer --version
[2025-10-12 19:12:51] apptainer version 1.4.3-1.el9
[2025-10-12 19:13:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:13:12] c-5-1.aglt2.org
[2025-10-12 19:13:12] apptainer works
[2025-10-12 19:13:13] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:13:13] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:13:13] Starting ATLAS job with PandaID=6840536939
[2025-10-12 19:13:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:28:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:28:38] 2025-10-13 05:18:12,047 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:28:38] 2025-10-13 05:18:12,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:28:38] 2025-10-13 05:18:12,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:28:38] 2025-10-13 05:18:12,066 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:28:38] 2025-10-13 05:18:12,072 | INFO     | sum of square deviations: 13871772680.749346
[2025-10-13 05:28:38] 2025-10-13 05:18:12,077 | INFO     | sum of deviations: 100502354433.75784
[2025-10-13 05:28:38] 2025-10-13 05:18:12,078 | INFO     | mean x: 1760321812.6985915
[2025-10-13 05:28:38] 2025-10-13 05:18:12,078 | INFO     | mean y: 2100694.315492958
[2025-10-13 05:28:38] 2025-10-13 05:18:12,078 | INFO     | -- intersect: -12751603594.88657
[2025-10-13 05:28:38] 2025-10-13 05:18:12,078 | INFO     | intersect: -12751603594.88657
[2025-10-13 05:28:38] 2025-10-13 05:18:12,079 | INFO     | chi2: 2.994450526024253
[2025-10-13 05:28:38] 2025-10-13 05:18:12,079 | INFO     | sum of square deviations: 13293893295.77428
[2025-10-13 05:28:38] 2025-10-13 05:18:12,083 | INFO     | sum of deviations: 100459137003.56291
[2025-10-13 05:28:38] 2025-10-13 05:18:12,086 | INFO     | mean x: 1760321660.2085714
[2025-10-13 05:28:38] 2025-10-13 05:18:12,086 | INFO     | mean y: 2100682.745714286
[2025-10-13 05:28:38] 2025-10-13 05:18:12,086 | INFO     | -- intersect: -13300277401.592026
[2025-10-13 05:28:38] 2025-10-13 05:18:12,086 | INFO     | intersect: -13300277401.592026
[2025-10-13 05:28:38] 2025-10-13 05:18:12,087 | INFO     | chi2: 2.990744828020377
[2025-10-13 05:28:38] 2025-10-13 05:18:12,087 | INFO     | current chi2=2.990744828020377 (change=0.1237521866422744 %)
[2025-10-13 05:28:38] 2025-10-13 05:18:12,087 | INFO     | right removable region: 349
[2025-10-13 05:28:38] 2025-10-13 05:18:12,088 | INFO     | sum of square deviations: 13293763427.188572
[2025-10-13 05:28:38] 2025-10-13 05:18:12,092 | INFO     | sum of deviations: 26496270012.811417
[2025-10-13 05:28:38] 2025-10-13 05:18:12,092 | INFO     | mean x: 1760321965.2057142
[2025-10-13 05:28:38] 2025-10-13 05:18:12,092 | INFO     | mean y: 2120165.294285714
[2025-10-13 05:28:38] 2025-10-13 05:18:12,092 | INFO     | -- intersect: -3506439796.3024955
[2025-10-13 05:28:38] 2025-10-13 05:18:12,092 | INFO     | intersect: -3506439796.3024955
[2025-10-13 05:28:38] 2025-10-13 05:18:12,093 | INFO     | chi2: 0.5284554995284934
[2025-10-13 05:28:38] 2025-10-13 05:18:12,093 | INFO     | current chi2=0.5284554995284934 (change=82.35217129367214 %)
[2025-10-13 05:28:38] 2025-10-13 05:18:12,094 | INFO     | sum of square deviations: 12732055265.014517
[2025-10-13 05:28:38] 2025-10-13 05:18:12,098 | INFO     | sum of deviations: -545067941.8695661
[2025-10-13 05:28:38] 2025-10-13 05:18:12,098 | INFO     | mean x: 1760322117.710145
[2025-10-13 05:28:38] 2025-10-13 05:18:12,098 | INFO     | mean y: 2127500.9913043478
[2025-10-13 05:28:38] 2025-10-13 05:18:12,098 | INFO     | -- intersect: 77488087.61742994
[2025-10-13 05:28:38] 2025-10-13 05:18:12,098 | INFO     | intersect: 77488087.61742994
[2025-10-13 05:28:38] 2025-10-13 05:18:12,099 | INFO     | chi2: 0.22302844547131812
[2025-10-13 05:28:38] 2025-10-13 05:18:12,099 | INFO     | current chi2=0.22302844547131812 (change=57.79617287163972 %)
[2025-10-13 05:28:38] 2025-10-13 05:18:12,100 | INFO     | sum of square deviations: 12186435884.173473
[2025-10-13 05:28:38] 2025-10-13 05:18:12,103 | INFO     | sum of deviations: 1846181798.2323534
[2025-10-13 05:28:38] 2025-10-13 05:18:12,103 | INFO     | mean x: 1760322270.2088234
[2025-10-13 05:28:38] 2025-10-13 05:18:12,103 | INFO     | mean y: 2126828.855882353
[2025-10-13 05:28:38] 2025-10-13 05:18:12,103 | INFO     | -- intersect: -264552860.3634404
[2025-10-13 05:28:38] 2025-10-13 05:18:12,103 | INFO     | intersect: -264552860.3634404
[2025-10-13 05:28:38] 2025-10-13 05:18:12,104 | INFO     | chi2: 0.21939670362317243
[2025-10-13 05:28:38] 2025-10-13 05:18:12,104 | INFO     | current chi2=0.21939670362317243 (change=1.6283760757381667 %)
[2025-10-13 05:28:38] 2025-10-13 05:18:12,104 | INFO     | left removable region: 30
[2025-10-13 05:28:38] 2025-10-13 05:18:12,105 | INFO     | sum of square deviations: 10064988971.504671
[2025-10-13 05:28:38] 2025-10-13 05:18:12,108 | INFO     | sum of deviations: 8445202748.10032
[2025-10-13 05:28:38] 2025-10-13 05:18:12,108 | INFO     | mean x: 1760322544.6959248
[2025-10-13 05:28:38] 2025-10-13 05:18:12,108 | INFO     | mean y: 2126160.8463949845
[2025-10-13 05:28:38] 2025-10-13 05:18:12,108 | INFO     | -- intersect: -1474902858.66842
[2025-10-13 05:28:38] 2025-10-13 05:18:12,108 | INFO     | intersect: -1474902858.66842
[2025-10-13 05:28:38] 2025-10-13 05:18:12,109 | INFO     | chi2: 0.19808786005392265
[2025-10-13 05:28:38] 2025-10-13 05:18:12,109 | INFO     | -- intersect: -1474902858.66842
[2025-10-13 05:28:38] 2025-10-13 05:18:12,109 | INFO     | current memory leak: 0.84 B/s (using 319 data points, chi2=0.20)
[2025-10-13 05:28:38] 2025-10-13 05:18:12,110 | INFO     | could have reported an average CPU frequency of 2600 MHz (15 samples)
[2025-10-13 05:28:38] 2025-10-13 05:18:12,110 | INFO     | ..............................
[2025-10-13 05:28:38] 2025-10-13 05:18:12,110 | INFO     | . Timing measurements:
[2025-10-13 05:28:38] 2025-10-13 05:18:12,110 | INFO     | . get job = 0 s
[2025-10-13 05:28:38] 2025-10-13 05:18:12,110 | INFO     | . initial setup = 6 s
[2025-10-13 05:28:38] 2025-10-13 05:18:12,110 | INFO     | . payload setup = 44 s
[2025-10-13 05:28:38] 2025-10-13 05:18:12,110 | INFO     | . stage-in = 0 s
[2025-10-13 05:28:38] 2025-10-13 05:18:12,111 | INFO     | . payload execution = 21671 s
[2025-10-13 05:28:38] 2025-10-13 05:18:12,111 | INFO     | . stage-out = 4 s
[2025-10-13 05:28:38] 2025-10-13 05:18:12,111 | INFO     | . log creation = 0 s
[2025-10-13 05:28:38] 2025-10-13 05:18:12,111 | INFO     | ..............................
[2025-10-13 05:28:38] 2025-10-13 05:18:12,427 | INFO     | 
[2025-10-13 05:28:38] 2025-10-13 05:18:12,427 | INFO     | job summary report
[2025-10-13 05:28:38] 2025-10-13 05:18:12,428 | INFO     | --------------------------------------------------
[2025-10-13 05:28:38] 2025-10-13 05:18:12,428 | INFO     | PanDA job id: 6840536939
[2025-10-13 05:28:38] 2025-10-13 05:18:12,428 | INFO     | task id: 46676269
[2025-10-13 05:28:38] 2025-10-13 05:18:12,428 | INFO     | errors: (none)
[2025-10-13 05:28:38] 2025-10-13 05:18:12,428 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:28:38] 2025-10-13 05:18:12,428 | INFO     | pilot state: finished 
[2025-10-13 05:28:38] 2025-10-13 05:18:12,428 | INFO     | transexitcode: 0
[2025-10-13 05:28:38] 2025-10-13 05:18:12,428 | INFO     | exeerrorcode: 0
[2025-10-13 05:28:38] 2025-10-13 05:18:12,428 | INFO     | exeerrordiag: 
[2025-10-13 05:28:38] 2025-10-13 05:18:12,428 | INFO     | exitcode: 0
[2025-10-13 05:28:38] 2025-10-13 05:18:12,428 | INFO     | exitmsg: OK
[2025-10-13 05:28:38] 2025-10-13 05:18:12,429 | INFO     | cpuconsumptiontime: 49525 s
[2025-10-13 05:28:38] 2025-10-13 05:18:12,429 | INFO     | nevents: 400
[2025-10-13 05:28:38] 2025-10-13 05:18:12,429 | INFO     | neventsw: 0
[2025-10-13 05:28:38] 2025-10-13 05:18:12,429 | INFO     | pid: 450668
[2025-10-13 05:28:38] 2025-10-13 05:18:12,430 | INFO     | pgrp: 450668
[2025-10-13 05:28:38] 2025-10-13 05:18:12,430 | INFO     | corecount: 8
[2025-10-13 05:28:38] 2025-10-13 05:18:12,430 | INFO     | event service: False
[2025-10-13 05:28:38] 2025-10-13 05:18:12,430 | INFO     | sizes: {0: 2348630, 1: 2348742, 2: 2348885, 3: 2348913, 14: 2348941, 25: 2348969, 36: 2349387, 47: 2349415, 21720: 2383167, 21725: 2392221, 21749: 2392359}
[2025-10-13 05:28:38] 2025-10-13 05:18:12,430 | INFO     | --------------------------------------------------
[2025-10-13 05:28:38] 2025-10-13 05:18:12,430 | INFO     | 
[2025-10-13 05:28:38] 2025-10-13 05:18:12,430 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 05:28:38] 2025-10-13 05:18:12,552 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,553 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,553 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,553 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,553 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,553 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,554 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,554 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,554 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,554 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,554 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:28:38] 2025-10-13 05:18:12,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,554 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:28:38] 2025-10-13 05:18:12,555 | INFO     | job 6840536939 has completed (purged errors)
[2025-10-13 05:28:38] 2025-10-13 05:18:12,555 | INFO     | overall cleanup function is called
[2025-10-13 05:28:38] 2025-10-13 05:18:13,565 | INFO     | --- collectZombieJob: --- 10, [450668]
[2025-10-13 05:28:38] 2025-10-13 05:18:13,565 | INFO     | zombie collector waiting for pid 450668
[2025-10-13 05:28:38] 2025-10-13 05:18:13,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:28:38] 2025-10-13 05:18:13,566 | INFO     | collected zombie processes
[2025-10-13 05:28:38] 2025-10-13 05:18:13,566 | INFO     | will attempt to kill all subprocesses of pid=450668
[2025-10-13 05:28:38] 2025-10-13 05:18:14,087 | INFO     | process IDs to be killed: [450668] (in reverse order)
[2025-10-13 05:28:38] 2025-10-13 05:18:14,227 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:28:38] 2025-10-13 05:18:14,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:28:38] 2025-10-13 05:18:14,243 | INFO     | did not find any defunct processes belonging to 450668
[2025-10-13 05:28:38] 2025-10-13 05:18:14,265 | INFO     | did not find any defunct processes belonging to 450668
[2025-10-13 05:28:38] 2025-10-13 05:18:14,266 | INFO     | ready for new job
[2025-10-13 05:28:38] 2025-10-13 05:18:14,266 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:28:38] 2025-10-13 05:18:14,268 | INFO     | ***************************************
[2025-10-13 05:28:38] 2025-10-13 05:18:14,268 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:28:38] 2025-10-13 05:18:14,268 | INFO     | ***************************************
[2025-10-13 05:28:38] 2025-10-13 05:18:14,269 | INFO     | 
[2025-10-13 05:28:38] 2025-10-13 05:18:14,270 | INFO     | architecture information:
[2025-10-13 05:28:38] 2025-10-13 05:18:14,271 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:28:38] 2025-10-13 05:18:14,299 | INFO     | cat /etc/os-release:
[2025-10-13 05:28:38] NAME="CentOS Linux"
[2025-10-13 05:28:38] VERSION="7 (Core)"
[2025-10-13 05:28:38] ID="centos"
[2025-10-13 05:28:38] ID_LIKE="rhel fedora"
[2025-10-13 05:28:38] VERSION_ID="7"
[2025-10-13 05:28:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:28:38] ANSI_COLOR="0;31"
[2025-10-13 05:28:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:28:38] HOME_URL="https://www.centos.org/"
[2025-10-13 05:28:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:28:38] 
[2025-10-13 05:28:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:28:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:28:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:28:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:28:38] 
[2025-10-13 05:28:38] 2025-10-13 05:18:14,300 | INFO     | ***************************************
[2025-10-13 05:28:38] 2025-10-13 05:18:14,803 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 05:28:38] 2025-10-13 05:18:14,842 | INFO     | sufficient remaining disk space (74705797120 B)
[2025-10-13 05:28:38] 2025-10-13 05:18:14,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:28:38] 2025-10-13 05:18:14,842 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:28:38] 2025-10-13 05:18:14,842 | INFO     | update_server=False
[2025-10-13 05:28:38] 2025-10-13 05:18:14,843 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:28:38] 2025-10-13 05:18:14,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:28:38] 2025-10-13 05:18:14,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:28:38] 2025-10-13 05:18:14,934 | INFO     | aborting loop
[2025-10-13 05:28:38] 2025-10-13 05:18:15,319 | INFO     | all data control threads have been joined
[2025-10-13 05:28:38] 2025-10-13 05:18:15,851 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:15,853 | INFO     | all job control threads have been joined
[2025-10-13 05:28:38] 2025-10-13 05:18:15,935 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:15,939 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:16,037 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:16,037 | INFO     | [job] validate thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:16,233 | INFO     | all payload control threads have been joined
[2025-10-13 05:28:38] 2025-10-13 05:18:16,326 | INFO     | [data] control thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:16,376 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:16,457 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:16,500 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:16,732 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:16,849 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:16,859 | INFO     | [job] control thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:17,239 | INFO     | [payload] control thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:17,270 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:28:38] 2025-10-13 05:18:17,353 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:17,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:28:38] 2025-10-13 05:18:18,455 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:21,282 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:28:38] 2025-10-13 05:18:45,475 | INFO     | PID=432026 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 05:28:38] 2025-10-13 05:18:45,475 | INFO     | .. there are 36 such processes running
[2025-10-13 05:28:38] 2025-10-13 05:18:45,478 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:28:38] 2025-10-13 05:18:45,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:28:38] 2025-10-13 05:18:45,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:28:38] 2025-10-13 05:19:05,713 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:28:38] 2025-10-13 05:19:06,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140568934725440)>', '<ExcThread(monitor, started 140568147511040)>']
[2025-10-13 05:28:38] 2025-10-13 05:19:07,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:28:38] 2025-10-13 05:19:07,641 | INFO     | [monitor] control thread has ended
[2025-10-13 05:28:38] 2025-10-13 05:19:11,746 | INFO     | all workflow threads have been joined
[2025-10-13 05:28:38] 2025-10-13 05:19:11,746 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:28:38] 2025-10-13 05:19:11,747 | INFO     | traces error code: 0
[2025-10-13 05:28:38] 2025-10-13 05:19:11,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:28:38] 2025-10-13 05:19:12,341 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:28:38] 2025-10-13 05:19:12,355 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:28:38] 2025-10-13 05:19:12,377 [wrapper] pilotpid: 432026
[2025-10-13 05:28:38] 2025-10-13 05:19:12,381 [wrapper] Pilot exit status: 0
[2025-10-13 05:28:38] 2025-10-13 05:19:12,458 [wrapper] pandaids: 6840536939
[2025-10-13 05:28:38] 2025-10-13 05:19:13,016 [wrapper] cleanup supervisor_pilot 1520504 432027
[2025-10-13 05:28:38] 2025-10-13 05:19:13,049 [wrapper] Test setup, not cleaning
[2025-10-13 05:28:38] 2025-10-13 05:19:13,153 [wrapper] apfmon messages muted
[2025-10-13 05:28:38] 2025-10-13 05:19:13,170 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:28:38] 2025-10-13 05:19:13,188 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:28:38]  *** Error codes and diagnostics ***
[2025-10-13 05:28:38]     "exeErrorCode": 0,
[2025-10-13 05:28:38]     "exeErrorDiag": "",
[2025-10-13 05:28:38]     "pilotErrorCode": 0,
[2025-10-13 05:28:38]     "pilotErrorDiag": "",
[2025-10-13 05:28:38]  *** Listing of results directory ***
[2025-10-13 05:28:38] total 414764
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:40 queuedata.json
[2025-10-13 05:28:38] -rwx------. 1 boincer umatlas     36292 Oct 12 14:41 runpilot2-wrapper.sh
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:28:38] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:12 run_atlas
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:12 job.xml
[2025-10-13 05:28:38] -rw-r--r--. 2 boincer umatlas 221440111 Oct 12 19:12 EVNT.46676267._004414.pool.root.1
[2025-10-13 05:28:38] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 19:12 input.tar.gz
[2025-10-13 05:28:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:12 start_atlas.sh
[2025-10-13 05:28:38] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:12 shared
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:12 boinc_lockfile
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 19:13 pandaJob.out
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas    975603 Oct 12 19:14 agis_schedconf.cvmfs.json
[2025-10-13 05:28:38] drwx------. 5 boincer umatlas      4096 Oct 12 19:14 pilot3
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas 193147170 Oct 13 01:16 HITS.46676269._086358.pool.root.1
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas       531 Oct 13 01:17 boinc_task_state.xml
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas      1041 Oct 13 01:17 memory_monitor_summary.json
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas   1560580 Oct 13 01:17 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas    536117 Oct 13 01:17 log.46676269._086358.job.log.tgz.1
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas      7820 Oct 13 01:18 heartbeat.json
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas        95 Oct 13 01:18 pilot_heartbeat.json
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas      4823 Oct 13 01:19 pilotlog.txt
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas   2576966 Oct 13 01:19 log.46676269._086358.job.log.1
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas       357 Oct 13 01:19 output.list
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas       620 Oct 13 01:19 runtime_log
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas   3133440 Oct 13 01:19 result.tar.gz
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas      8689 Oct 13 01:19 runtime_log.err
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas       655 Oct 13 01:19 BNeMDmZBGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmj6kNDmmRxEOn.diag
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 05:28 init_data.xml
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:28 boinc_mmap_file
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:28 wrapper_checkpoint.txt
[2025-10-13 05:28:38] -rw-r--r--. 1 boincer umatlas     21008 Oct 13 05:28 stderr.txt
[2025-10-13 05:28:38] HITS file was successfully produced:
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas 193147170 Oct 13 01:16 shared/HITS.pool.root.1
[2025-10-13 05:28:38]  *** Contents of shared directory: ***
[2025-10-13 05:28:38] total 408516
[2025-10-13 05:28:38] -rw-r--r--. 2 boincer umatlas 221440111 Oct 12 19:12 ATLAS.root_0
[2025-10-13 05:28:38] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 19:12 input.tar.gz
[2025-10-13 05:28:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:12 start_atlas.sh
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas 193147170 Oct 13 01:16 HITS.pool.root.1
[2025-10-13 05:28:38] -rw-------. 1 boincer umatlas   3133440 Oct 13 01:19 result.tar.gz
05:28:40 (423885): run_atlas exited; CPU time 50258.661898
05:28:40 (423885): called boinc_finish(0)

</stderr_txt>
]]>

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