Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:09:26 (19761): wrapper (7.7.26015): starting
18:09:26 (19761): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:09:26] Arguments: --nthreads 8
[2025-10-12 18:09:26] Threads: 8
[2025-10-12 18:09:26] Checking for CVMFS
[2025-10-12 18:09:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:09:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:09:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:09:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:09:26] 2.11.2.0 2466 53451 120084 151639 1 56 18224735 18432000 1833 130560 0 48646683 99.974 2498271 28282 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:09:26] CVMFS is ok
[2025-10-12 18:09:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:09:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:09:26] Further information can be found at the LHC@home message board.
[2025-10-12 18:09:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:09:26] Checking for apptainer binary...
[2025-10-12 18:09:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:09:26] Running /usr/bin/apptainer --version
[2025-10-12 18:09:26] apptainer version 1.3.2-1.el7
[2025-10-12 18:09:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:09:27] c-206-20.aglt2.org
[2025-10-12 18:09:27] apptainer works
[2025-10-12 18:09:27] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:09:27] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:09:27] Starting ATLAS job with PandaID=6840749570
[2025-10-12 18:09:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:06:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:06:00] 2025-10-13 01:05:22,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:06:00] 2025-10-13 01:05:22,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:06:00] 2025-10-13 01:05:22,972 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:06:00] 2025-10-13 01:05:22,972 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,973 | INFO     | sum of deviations: 13086089233.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,973 | INFO     | mean x: 1760312248.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,973 | INFO     | mean y: 2452196.5260115606
[2025-10-12 21:06:00] 2025-10-13 01:05:22,973 | INFO     | -- intersect: -14345745958.378542
[2025-10-12 21:06:00] 2025-10-13 01:05:22,973 | INFO     | intersect: -14345745958.378542
[2025-10-12 21:06:00] 2025-10-13 01:05:22,974 | INFO     | chi2: 2.1253991664570764
[2025-10-12 21:06:00] 2025-10-13 01:05:22,974 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,975 | INFO     | sum of deviations: 24262341971.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,975 | INFO     | mean x: 1760312095.5
[2025-10-12 21:06:00] 2025-10-13 01:05:22,975 | INFO     | mean y: 2464492.011904762
[2025-10-12 21:06:00] 2025-10-13 01:05:22,975 | INFO     | -- intersect: -29046557231.907944
[2025-10-12 21:06:00] 2025-10-13 01:05:22,975 | INFO     | intersect: -29046557231.907944
[2025-10-12 21:06:00] 2025-10-13 01:05:22,975 | INFO     | chi2: 1.3026400462116776
[2025-10-12 21:06:00] 2025-10-13 01:05:22,976 | INFO     | current chi2=1.3026400462116776 (change=38.71080469166143 %)
[2025-10-12 21:06:00] 2025-10-13 01:05:22,976 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,976 | INFO     | sum of deviations: 23532031427.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,977 | INFO     | mean x: 1760311943.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,977 | INFO     | mean y: 2463617.5950920247
[2025-10-12 21:06:00] 2025-10-13 01:05:22,977 | INFO     | -- intersect: -30845334090.64434
[2025-10-12 21:06:00] 2025-10-13 01:05:22,977 | INFO     | intersect: -30845334090.64434
[2025-10-12 21:06:00] 2025-10-13 01:05:22,977 | INFO     | chi2: 1.3033149889820417
[2025-10-12 21:06:00] 2025-10-13 01:05:22,977 | INFO     | current chi2=1.3033149889820417 (change=-0.05181345163822674 %)
[2025-10-12 21:06:00] 2025-10-13 01:05:22,977 | INFO     | right removable region: 162
[2025-10-12 21:06:00] 2025-10-13 01:05:22,978 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,978 | INFO     | sum of deviations: -10158834287.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,979 | INFO     | mean x: 1760312400.5
[2025-10-12 21:06:00] 2025-10-13 01:05:22,979 | INFO     | mean y: 2478028.3095238097
[2025-10-12 21:06:00] 2025-10-13 01:05:22,979 | INFO     | -- intersect: 12165535056.218977
[2025-10-12 21:06:00] 2025-10-13 01:05:22,979 | INFO     | intersect: 12165535056.218977
[2025-10-12 21:06:00] 2025-10-13 01:05:22,979 | INFO     | chi2: 0.8500028893500355
[2025-10-12 21:06:00] 2025-10-13 01:05:22,979 | INFO     | current chi2=0.8500028893500355 (change=60.00737636653243 %)
[2025-10-12 21:06:00] 2025-10-13 01:05:22,979 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,980 | INFO     | sum of deviations: -11315360798.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,980 | INFO     | mean x: 1760312553.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,980 | INFO     | mean y: 2479391.36196319
[2025-10-12 21:06:00] 2025-10-13 01:05:22,981 | INFO     | -- intersect: 14835626411.956318
[2025-10-12 21:06:00] 2025-10-13 01:05:22,981 | INFO     | intersect: 14835626411.956318
[2025-10-12 21:06:00] 2025-10-13 01:05:22,981 | INFO     | chi2: 0.8458390696192077
[2025-10-12 21:06:00] 2025-10-13 01:05:22,981 | INFO     | current chi2=0.8458390696192077 (change=0.4898594796556177 %)
[2025-10-12 21:06:00] 2025-10-13 01:05:22,981 | INFO     | left removable region: 20
[2025-10-12 21:06:00] 2025-10-13 01:05:22,981 | INFO     | sum of square deviations: 887813855.5
[2025-10-12 21:06:00] 2025-10-13 01:05:22,982 | INFO     | sum of deviations: -147837831.0
[2025-10-12 21:06:00] 2025-10-13 01:05:22,982 | INFO     | mean x: 1760312522.5
[2025-10-12 21:06:00] 2025-10-13 01:05:22,982 | INFO     | mean y: 2493410.7183098593
[2025-10-12 21:06:00] 2025-10-13 01:05:22,982 | INFO     | -- intersect: 295618803.61046743
[2025-10-12 21:06:00] 2025-10-13 01:05:22,982 | INFO     | intersect: 295618803.61046743
[2025-10-12 21:06:00] 2025-10-13 01:05:22,983 | INFO     | chi2: 0.0003338028855124934
[2025-10-12 21:06:00] 2025-10-13 01:05:22,983 | INFO     | -- intersect: 295618803.61046743
[2025-10-12 21:06:00] 2025-10-13 01:05:22,983 | INFO     | current memory leak: -0.17 B/s (using 142 data points, chi2=0.00)
[2025-10-12 21:06:00] 2025-10-13 01:05:22,983 | INFO     | could have reported an average CPU frequency of 2569 MHz (9 samples)
[2025-10-12 21:06:00] 2025-10-13 01:05:22,983 | INFO     | ..............................
[2025-10-12 21:06:00] 2025-10-13 01:05:22,984 | INFO     | . Timing measurements:
[2025-10-12 21:06:00] 2025-10-13 01:05:22,984 | INFO     | . get job = 0 s
[2025-10-12 21:06:00] 2025-10-13 01:05:22,984 | INFO     | . initial setup = 2 s
[2025-10-12 21:06:00] 2025-10-13 01:05:22,984 | INFO     | . payload setup = 4 s
[2025-10-12 21:06:00] 2025-10-13 01:05:22,984 | INFO     | . stage-in = 0 s
[2025-10-12 21:06:00] 2025-10-13 01:05:22,984 | INFO     | . payload execution = 10516 s
[2025-10-12 21:06:00] 2025-10-13 01:05:22,984 | INFO     | . stage-out = 0 s
[2025-10-12 21:06:00] 2025-10-13 01:05:22,984 | INFO     | . log creation = 0 s
[2025-10-12 21:06:00] 2025-10-13 01:05:22,984 | INFO     | ..............................
[2025-10-12 21:06:00] 2025-10-13 01:05:23,066 | INFO     | 
[2025-10-12 21:06:00] 2025-10-13 01:05:23,067 | INFO     | job summary report
[2025-10-12 21:06:00] 2025-10-13 01:05:23,067 | INFO     | --------------------------------------------------
[2025-10-12 21:06:00] 2025-10-13 01:05:23,067 | INFO     | PanDA job id: 6840749570
[2025-10-12 21:06:00] 2025-10-13 01:05:23,067 | INFO     | task id: 46676269
[2025-10-12 21:06:00] 2025-10-13 01:05:23,067 | INFO     | errors: (none)
[2025-10-12 21:06:00] 2025-10-13 01:05:23,067 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:06:00] 2025-10-13 01:05:23,067 | INFO     | pilot state: finished 
[2025-10-12 21:06:00] 2025-10-13 01:05:23,067 | INFO     | transexitcode: 0
[2025-10-12 21:06:00] 2025-10-13 01:05:23,067 | INFO     | exeerrorcode: 0
[2025-10-12 21:06:00] 2025-10-13 01:05:23,068 | INFO     | exeerrordiag: 
[2025-10-12 21:06:00] 2025-10-13 01:05:23,068 | INFO     | exitcode: 0
[2025-10-12 21:06:00] 2025-10-13 01:05:23,068 | INFO     | exitmsg: OK
[2025-10-12 21:06:00] 2025-10-13 01:05:23,068 | INFO     | cpuconsumptiontime: 78869 s
[2025-10-12 21:06:00] 2025-10-13 01:05:23,068 | INFO     | nevents: 400
[2025-10-12 21:06:00] 2025-10-13 01:05:23,068 | INFO     | neventsw: 0
[2025-10-12 21:06:00] 2025-10-13 01:05:23,068 | INFO     | pid: 29876
[2025-10-12 21:06:00] 2025-10-13 01:05:23,068 | INFO     | pgrp: 29876
[2025-10-12 21:06:00] 2025-10-13 01:05:23,068 | INFO     | corecount: 8
[2025-10-12 21:06:00] 2025-10-13 01:05:23,068 | INFO     | event service: False
[2025-10-12 21:06:00] 2025-10-13 01:05:23,068 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 4: 2349175, 12: 2349203, 10524: 2378034, 10525: 2378161, 10526: 2387271, 10530: 2387473}
[2025-10-12 21:06:00] 2025-10-13 01:05:23,069 | INFO     | --------------------------------------------------
[2025-10-12 21:06:00] 2025-10-13 01:05:23,069 | INFO     | 
[2025-10-12 21:06:00] 2025-10-13 01:05:23,069 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 21:06:00] 2025-10-13 01:05:23,087 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,087 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,087 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,087 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,089 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,089 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,089 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:06:00] 2025-10-13 01:05:23,089 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,089 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:06:00] 2025-10-13 01:05:23,089 | INFO     | job 6840749570 has completed (purged errors)
[2025-10-12 21:06:00] 2025-10-13 01:05:23,089 | INFO     | overall cleanup function is called
[2025-10-12 21:06:00] 2025-10-13 01:05:24,097 | INFO     | --- collectZombieJob: --- 10, [29876]
[2025-10-12 21:06:00] 2025-10-13 01:05:24,097 | INFO     | zombie collector waiting for pid 29876
[2025-10-12 21:06:00] 2025-10-13 01:05:24,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:06:00] 2025-10-13 01:05:24,097 | INFO     | collected zombie processes
[2025-10-12 21:06:00] 2025-10-13 01:05:24,097 | INFO     | will attempt to kill all subprocesses of pid=29876
[2025-10-12 21:06:00] 2025-10-13 01:05:24,266 | INFO     | process IDs to be killed: [29876] (in reverse order)
[2025-10-12 21:06:00] 2025-10-13 01:05:24,311 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:06:00] 2025-10-13 01:05:24,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:06:00] 2025-10-13 01:05:24,314 | INFO     | did not find any defunct processes belonging to 29876
[2025-10-12 21:06:00] 2025-10-13 01:05:24,316 | INFO     | did not find any defunct processes belonging to 29876
[2025-10-12 21:06:00] 2025-10-13 01:05:24,316 | INFO     | ready for new job
[2025-10-12 21:06:00] 2025-10-13 01:05:24,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:06:00] 2025-10-13 01:05:24,318 | INFO     | ***************************************
[2025-10-12 21:06:00] 2025-10-13 01:05:24,318 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:06:00] 2025-10-13 01:05:24,318 | INFO     | ***************************************
[2025-10-12 21:06:00] 2025-10-13 01:05:24,318 | INFO     | 
[2025-10-12 21:06:00] 2025-10-13 01:05:24,319 | INFO     | architecture information:
[2025-10-12 21:06:00] 2025-10-13 01:05:24,319 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:06:00] 2025-10-13 01:05:24,333 | INFO     | cat /etc/os-release:
[2025-10-12 21:06:00] NAME="CentOS Linux"
[2025-10-12 21:06:00] VERSION="7 (Core)"
[2025-10-12 21:06:00] ID="centos"
[2025-10-12 21:06:00] ID_LIKE="rhel fedora"
[2025-10-12 21:06:00] VERSION_ID="7"
[2025-10-12 21:06:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:06:00] ANSI_COLOR="0;31"
[2025-10-12 21:06:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:06:00] HOME_URL="https://www.centos.org/"
[2025-10-12 21:06:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:06:00] 
[2025-10-12 21:06:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:06:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:06:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:06:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:06:00] 
[2025-10-12 21:06:00] 2025-10-13 01:05:24,333 | INFO     | ***************************************
[2025-10-12 21:06:00] 2025-10-13 01:05:24,837 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 21:06:00] 2025-10-13 01:05:24,859 | INFO     | sufficient remaining disk space (28162654208 B)
[2025-10-12 21:06:00] 2025-10-13 01:05:24,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:06:00] 2025-10-13 01:05:24,860 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:06:00] 2025-10-13 01:05:24,860 | INFO     | update_server=False
[2025-10-12 21:06:00] 2025-10-13 01:05:24,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:06:00] 2025-10-13 01:05:24,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:06:00] 2025-10-13 01:05:24,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:06:00] 2025-10-13 01:05:25,183 | INFO     | all data control threads have been joined
[2025-10-12 21:06:00] 2025-10-13 01:05:25,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:06:00] 2025-10-13 01:05:25,782 | INFO     | all payload control threads have been joined
[2025-10-12 21:06:00] 2025-10-13 01:05:25,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:06:00] 2025-10-13 01:05:25,799 | INFO     | aborting loop
[2025-10-12 21:06:00] 2025-10-13 01:05:25,866 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:25,866 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:25,877 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:25,934 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:26,104 | INFO     | all job control threads have been joined
[2025-10-12 21:06:00] 2025-10-13 01:05:26,189 | INFO     | [data] control thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:26,369 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:26,516 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:26,652 | INFO     | [job] validate thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:26,787 | INFO     | [payload] control thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:26,807 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:26,866 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:26,880 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:27,109 | INFO     | [job] control thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:27,399 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:29,365 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:35,857 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:06:00] 2025-10-13 01:05:36,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:06:00] 2025-10-13 01:05:54,522 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:06:00] 2025-10-13 01:05:54,577 | INFO     | PID=23483 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 21:06:00] 2025-10-13 01:05:54,578 | INFO     | .. there are 3 such processes running
[2025-10-12 21:06:00] 2025-10-13 01:05:54,578 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:06:00] 2025-10-13 01:05:54,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:06:00] 2025-10-13 01:05:54,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:06:00] 2025-10-13 01:05:55,287 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140609496229696)>', '<ExcThread(monitor, started 140609192957696)>']
[2025-10-12 21:06:00] 2025-10-13 01:05:55,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:06:00] 2025-10-13 01:05:55,584 | INFO     | [monitor] control thread has ended
[2025-10-12 21:06:00] 2025-10-13 01:06:00,312 | INFO     | all workflow threads have been joined
[2025-10-12 21:06:00] 2025-10-13 01:06:00,312 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:06:00] 2025-10-13 01:06:00,312 | INFO     | traces error code: 0
[2025-10-12 21:06:00] 2025-10-13 01:06:00,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:06:00] 2025-10-13 01:06:00,405 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:06:00] 2025-10-13 01:06:00,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:06:00] 2025-10-13 01:06:00,409 [wrapper] pilotpid: 23483
[2025-10-12 21:06:00] 2025-10-13 01:06:00,411 [wrapper] Pilot exit status: 0
[2025-10-12 21:06:00] 2025-10-13 01:06:00,421 [wrapper] pandaids: 6840749570
[2025-10-12 21:06:00] 2025-10-13 01:06:00,451 [wrapper] cleanup supervisor_pilot 21318 23484
[2025-10-12 21:06:00] 2025-10-13 01:06:00,455 [wrapper] Test setup, not cleaning
[2025-10-12 21:06:00] 2025-10-13 01:06:00,457 [wrapper] apfmon messages muted
[2025-10-12 21:06:00] 2025-10-13 01:06:00,459 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:06:00] 2025-10-13 01:06:00,461 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:06:00]  *** Error codes and diagnostics ***
[2025-10-12 21:06:00]     "exeErrorCode": 0,
[2025-10-12 21:06:00]     "exeErrorDiag": "",
[2025-10-12 21:06:00]     "pilotErrorCode": 0,
[2025-10-12 21:06:00]     "pilotErrorDiag": "",
[2025-10-12 21:06:00]  *** Listing of results directory ***
[2025-10-12 21:06:00] total 403932
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:40 queuedata.json
[2025-10-12 21:06:00] -rwx------ 1 boincer umatlas     36292 Oct 12 16:41 runpilot2-wrapper.sh
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas       100 Oct 12 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:06:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 18:09 run_atlas
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas       105 Oct 12 18:09 job.xml
[2025-10-12 21:06:00] -rw-r--r-- 2 boincer umatlas 219815875 Oct 12 18:09 EVNT.46676267._004859.pool.root.1
[2025-10-12 21:06:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:09 start_atlas.sh
[2025-10-12 21:06:00] drwxrwx--x 2 boincer umatlas      4096 Oct 12 18:09 shared
[2025-10-12 21:06:00] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 18:09 input.tar.gz
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas         0 Oct 12 18:09 boinc_lockfile
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 18:09 pandaJob.out
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas    975528 Oct 12 18:09 agis_schedconf.cvmfs.json
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas   1560580 Oct 12 18:09 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:06:00] drwx------ 5 boincer umatlas      4096 Oct 12 18:09 pilot3
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas 186105560 Oct 12 21:04 HITS.46676269._089002.pool.root.1
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 21:04 init_data.xml
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas       531 Oct 12 21:04 boinc_task_state.xml
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas        95 Oct 12 21:05 pilot_heartbeat.json
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas      1054 Oct 12 21:05 memory_monitor_summary.json
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas    420731 Oct 12 21:05 log.46676269._089002.job.log.tgz.1
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas      7856 Oct 12 21:05 heartbeat.json
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 21:05 boinc_mmap_file
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas        28 Oct 12 21:05 wrapper_checkpoint.txt
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas      4893 Oct 12 21:06 pilotlog.txt
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas   1480979 Oct 12 21:06 log.46676269._089002.job.log.1
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas       357 Oct 12 21:06 output.list
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas       620 Oct 12 21:06 runtime_log
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas   1925120 Oct 12 21:06 result.tar.gz
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 21:06 runtime_log.err
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas       661 Oct 12 21:06 Lo5KDmd3HS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjUlNDmhJEIsm.diag
[2025-10-12 21:06:00] -rw-r--r-- 1 boincer umatlas     20872 Oct 12 21:06 stderr.txt
[2025-10-12 21:06:00] HITS file was successfully produced:
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas 186105560 Oct 12 21:04 shared/HITS.pool.root.1
[2025-10-12 21:06:00]  *** Contents of shared directory: ***
[2025-10-12 21:06:00] total 398868
[2025-10-12 21:06:00] -rw-r--r-- 2 boincer umatlas 219815875 Oct 12 18:09 ATLAS.root_0
[2025-10-12 21:06:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:09 start_atlas.sh
[2025-10-12 21:06:00] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 18:09 input.tar.gz
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas 186105560 Oct 12 21:04 HITS.pool.root.1
[2025-10-12 21:06:00] -rw------- 1 boincer umatlas   1925120 Oct 12 21:06 result.tar.gz
21:06:02 (19761): run_atlas exited; CPU time 79023.668656
21:06:02 (19761): called boinc_finish(0)

</stderr_txt>
]]>

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