Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:11:33 (372321): wrapper (7.7.26015): starting
18:11:33 (372321): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 18:11:33] Arguments: --nthreads 10
[2025-10-12 18:11:33] Threads: 10
[2025-10-12 18:11:33] Checking for CVMFS
[2025-10-12 18:11:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:11:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:11:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:11:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:11:36] 2.13.2.0 807844 129844 740268 151639 3 66 16651325 25181184 24541 16776704 0 108407488 99.579 113998292 26818 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 18:11:36] CVMFS is ok
[2025-10-12 18:11:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:11:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:11:36] Further information can be found at the LHC@home message board.
[2025-10-12 18:11:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:11:36] Checking for apptainer binary...
[2025-10-12 18:11:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:11:36] Running /usr/bin/apptainer --version
[2025-10-12 18:11:36] apptainer version 1.4.3-1.el9
[2025-10-12 18:11:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:11:37] c-16-38.aglt2.org
[2025-10-12 18:11:37] apptainer works
[2025-10-12 18:11:37] Set ATHENA_PROC_NUMBER=10
[2025-10-12 18:11:37] Set ATHENA_CORE_NUMBER=10
[2025-10-12 18:11:37] Starting ATLAS job with PandaID=6840536258
[2025-10-12 18:11:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:31:12]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:31:12] 2025-10-13 06:01:39,180 | INFO     | monitor loop #1428: job 0:6840536258 is in state 'finished'
[2025-10-13 05:31:12] 2025-10-13 06:01:39,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:31:12] 2025-10-13 06:01:40,045 | INFO     | time since job start (28137s) is within the limit (172800.0s)
[2025-10-13 05:31:12] 2025-10-13 06:01:41,289 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:31:12] 2025-10-13 06:01:41,361 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2736.6445833333332
[2025-10-13 05:31:12] 2025-10-13 06:01:41,372 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840536258/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:31:12] 2025-10-13 06:01:41,373 | INFO     | extracted standard info from prmon json
[2025-10-13 05:31:12] 2025-10-13 06:01:41,374 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:31:12] 2025-10-13 06:01:41,374 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:31:12] 2025-10-13 06:01:41,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:31:12] 2025-10-13 06:01:41,375 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:31:12] 2025-10-13 06:01:41,390 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:31:12] 2025-10-13 06:01:41,391 | INFO     | sum of square deviations: 29987697654.51413
[2025-10-13 05:31:12] 2025-10-13 06:01:41,402 | INFO     | sum of deviations: -39014801981.4052
[2025-10-13 05:31:12] 2025-10-13 06:01:41,403 | INFO     | mean x: 1760321267.912854
[2025-10-13 05:31:12] 2025-10-13 06:01:41,403 | INFO     | mean y: 2240539.3398692813
[2025-10-13 05:31:12] 2025-10-13 06:01:41,404 | INFO     | -- intersect: 2292465900.503525
[2025-10-13 05:31:12] 2025-10-13 06:01:41,404 | INFO     | intersect: 2292465900.503525
[2025-10-13 05:31:12] 2025-10-13 06:01:41,405 | INFO     | chi2: 3.479163718947537
[2025-10-13 05:31:12] 2025-10-13 06:01:41,408 | INFO     | sum of square deviations: 29018504854.64541
[2025-10-13 05:31:12] 2025-10-13 06:01:41,417 | INFO     | sum of deviations: -37563757806.70479
[2025-10-13 05:31:12] 2025-10-13 06:01:41,417 | INFO     | mean x: 1760321115.4207048
[2025-10-13 05:31:12] 2025-10-13 06:01:41,418 | INFO     | mean y: 2240769.202643172
[2025-10-13 05:31:12] 2025-10-13 06:01:41,418 | INFO     | -- intersect: 2280934188.209251
[2025-10-13 05:31:12] 2025-10-13 06:01:41,419 | INFO     | intersect: 2280934188.209251
[2025-10-13 05:31:12] 2025-10-13 06:01:41,421 | INFO     | chi2: 3.478031725709162
[2025-10-13 05:31:12] 2025-10-13 06:01:41,421 | INFO     | current chi2=3.478031725709162 (change=0.03253636016637597 %)
[2025-10-13 05:31:12] 2025-10-13 06:01:41,422 | INFO     | right removable region: 453
[2025-10-13 05:31:12] 2025-10-13 06:01:41,423 | INFO     | sum of square deviations: 29018277262.801804
[2025-10-13 05:31:12] 2025-10-13 06:01:41,432 | INFO     | sum of deviations: -129445054179.63863
[2025-10-13 05:31:12] 2025-10-13 06:01:41,432 | INFO     | mean x: 1760321420.4229076
[2025-10-13 05:31:12] 2025-10-13 06:01:41,432 | INFO     | mean y: 2254727.196035242
[2025-10-13 05:31:12] 2025-10-13 06:01:41,432 | INFO     | -- intersect: 7854716111.329238
[2025-10-13 05:31:12] 2025-10-13 06:01:41,433 | INFO     | intersect: 7854716111.329238
[2025-10-13 05:31:12] 2025-10-13 06:01:41,433 | INFO     | chi2: 1.3318666974909177
[2025-10-13 05:31:12] 2025-10-13 06:01:41,434 | INFO     | current chi2=1.3318666974909177 (change=61.71876907552332 %)
[2025-10-13 05:31:12] 2025-10-13 06:01:41,434 | INFO     | sum of square deviations: 28069973545.9956
[2025-10-13 05:31:12] 2025-10-13 06:01:41,440 | INFO     | sum of deviations: -162119723037.0668
[2025-10-13 05:31:12] 2025-10-13 06:01:41,440 | INFO     | mean x: 1760321572.9331849
[2025-10-13 05:31:12] 2025-10-13 06:01:41,441 | INFO     | mean y: 2259972.9977728287
[2025-10-13 05:31:12] 2025-10-13 06:01:41,441 | INFO     | -- intersect: 10169096980.965446
[2025-10-13 05:31:12] 2025-10-13 06:01:41,441 | INFO     | intersect: 10169096980.965446
[2025-10-13 05:31:12] 2025-10-13 06:01:41,443 | INFO     | chi2: 1.025447022551095
[2025-10-13 05:31:12] 2025-10-13 06:01:41,444 | INFO     | current chi2=1.025447022551095 (change=23.00678254941593 %)
[2025-10-13 05:31:12] 2025-10-13 06:01:41,444 | INFO     | left removable region: 20
[2025-10-13 05:31:12] 2025-10-13 06:01:41,447 | INFO     | sum of square deviations: 25175092635.778233
[2025-10-13 05:31:12] 2025-10-13 06:01:41,453 | INFO     | sum of deviations: -132521758485.83363
[2025-10-13 05:31:12] 2025-10-13 06:01:41,453 | INFO     | mean x: 1760321694.9468822
[2025-10-13 05:31:12] 2025-10-13 06:01:41,453 | INFO     | mean y: 2256090.7898383373
[2025-10-13 05:31:12] 2025-10-13 06:01:41,453 | INFO     | -- intersect: 9268594447.121876
[2025-10-13 05:31:12] 2025-10-13 06:01:41,454 | INFO     | intersect: 9268594447.121876
[2025-10-13 05:31:12] 2025-10-13 06:01:41,454 | INFO     | chi2: 0.9679381143029562
[2025-10-13 05:31:12] 2025-10-13 06:01:41,455 | INFO     | -- intersect: 9268594447.121876
[2025-10-13 05:31:12] 2025-10-13 06:01:41,455 | INFO     | current memory leak: -5.26 B/s (using 433 data points, chi2=0.97)
[2025-10-13 05:31:12] 2025-10-13 06:01:41,456 | INFO     | could have reported an average CPU frequency of 2772 MHz (19 samples)
[2025-10-13 05:31:12] 2025-10-13 06:01:41,456 | INFO     | ..............................
[2025-10-13 05:31:12] 2025-10-13 06:01:41,456 | INFO     | . Timing measurements:
[2025-10-13 05:31:12] 2025-10-13 06:01:41,456 | INFO     | . get job = 0 s
[2025-10-13 05:31:12] 2025-10-13 06:01:41,456 | INFO     | . initial setup = 6 s
[2025-10-13 05:31:12] 2025-10-13 06:01:41,456 | INFO     | . payload setup = 42 s
[2025-10-13 05:31:12] 2025-10-13 06:01:41,457 | INFO     | . stage-in = 0 s
[2025-10-13 05:31:12] 2025-10-13 06:01:41,457 | INFO     | . payload execution = 28009 s
[2025-10-13 05:31:12] 2025-10-13 06:01:41,457 | INFO     | . stage-out = 3 s
[2025-10-13 05:31:12] 2025-10-13 06:01:41,457 | INFO     | . log creation = 0 s
[2025-10-13 05:31:12] 2025-10-13 06:01:41,457 | INFO     | ..............................
[2025-10-13 05:31:12] 2025-10-13 06:01:41,927 | INFO     | 
[2025-10-13 05:31:12] 2025-10-13 06:01:41,927 | INFO     | job summary report
[2025-10-13 05:31:12] 2025-10-13 06:01:41,928 | INFO     | --------------------------------------------------
[2025-10-13 05:31:12] 2025-10-13 06:01:41,928 | INFO     | PanDA job id: 6840536258
[2025-10-13 05:31:12] 2025-10-13 06:01:41,928 | INFO     | task id: 46676269
[2025-10-13 05:31:12] 2025-10-13 06:01:41,950 | INFO     | errors: (none)
[2025-10-13 05:31:12] 2025-10-13 06:01:41,950 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:31:12] 2025-10-13 06:01:41,951 | INFO     | pilot state: finished 
[2025-10-13 05:31:12] 2025-10-13 06:01:41,951 | INFO     | transexitcode: 0
[2025-10-13 05:31:12] 2025-10-13 06:01:41,951 | INFO     | exeerrorcode: 0
[2025-10-13 05:31:12] 2025-10-13 06:01:41,951 | INFO     | exeerrordiag: 
[2025-10-13 05:31:12] 2025-10-13 06:01:41,951 | INFO     | exitcode: 0
[2025-10-13 05:31:12] 2025-10-13 06:01:41,951 | INFO     | exitmsg: OK
[2025-10-13 05:31:12] 2025-10-13 06:01:41,951 | INFO     | cpuconsumptiontime: 57267 s
[2025-10-13 05:31:12] 2025-10-13 06:01:41,952 | INFO     | nevents: 400
[2025-10-13 05:31:12] 2025-10-13 06:01:41,952 | INFO     | neventsw: 0
[2025-10-13 05:31:12] 2025-10-13 06:01:41,952 | INFO     | pid: 385041
[2025-10-13 05:31:12] 2025-10-13 06:01:41,952 | INFO     | pgrp: 385041
[2025-10-13 05:31:12] 2025-10-13 06:01:41,952 | INFO     | corecount: 10
[2025-10-13 05:31:12] 2025-10-13 06:01:41,952 | INFO     | event service: False
[2025-10-13 05:31:12] 2025-10-13 06:01:41,952 | INFO     | sizes: {0: 2348635, 1: 2348635, 2: 2348862, 13: 2348862, 24: 2348918, 33: 2349208, 35: 2349392, 28055: 2385913, 28056: 2385912, 28061: 2394966, 28064: 2395022, 280
[2025-10-13 05:31:12] 2025-10-13 06:01:41,952 | INFO     | --------------------------------------------------
[2025-10-13 05:31:12] 2025-10-13 06:01:41,953 | INFO     | 
[2025-10-13 05:31:12] 2025-10-13 06:01:41,953 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 05:31:12] 2025-10-13 06:01:42,043 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,043 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,043 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,043 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,050 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:31:12] 2025-10-13 06:01:42,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,050 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:31:12] 2025-10-13 06:01:42,050 | INFO     | job 6840536258 has completed (purged errors)
[2025-10-13 05:31:12] 2025-10-13 06:01:42,050 | INFO     | overall cleanup function is called
[2025-10-13 05:31:12] 2025-10-13 06:01:43,059 | INFO     | --- collectZombieJob: --- 10, [385041]
[2025-10-13 05:31:12] 2025-10-13 06:01:43,059 | INFO     | zombie collector waiting for pid 385041
[2025-10-13 05:31:12] 2025-10-13 06:01:43,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:31:12] 2025-10-13 06:01:43,060 | INFO     | collected zombie processes
[2025-10-13 05:31:12] 2025-10-13 06:01:43,060 | INFO     | will attempt to kill all subprocesses of pid=385041
[2025-10-13 05:31:12] 2025-10-13 06:01:43,611 | INFO     | process IDs to be killed: [385041] (in reverse order)
[2025-10-13 05:31:12] 2025-10-13 06:01:43,743 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:31:12] 2025-10-13 06:01:43,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:31:12] 2025-10-13 06:01:43,794 | INFO     | did not find any defunct processes belonging to 385041
[2025-10-13 05:31:12] 2025-10-13 06:01:43,808 | INFO     | did not find any defunct processes belonging to 385041
[2025-10-13 05:31:12] 2025-10-13 06:01:43,808 | INFO     | ready for new job
[2025-10-13 05:31:12] 2025-10-13 06:01:43,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:31:12] 2025-10-13 06:01:43,811 | INFO     | ***************************************
[2025-10-13 05:31:12] 2025-10-13 06:01:43,811 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:31:12] 2025-10-13 06:01:43,811 | INFO     | ***************************************
[2025-10-13 05:31:12] 2025-10-13 06:01:43,812 | INFO     | 
[2025-10-13 05:31:12] 2025-10-13 06:01:43,836 | INFO     | architecture information:
[2025-10-13 05:31:12] 2025-10-13 06:01:43,838 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:31:12] 2025-10-13 06:01:43,967 | INFO     | cat /etc/os-release:
[2025-10-13 05:31:12] NAME="CentOS Linux"
[2025-10-13 05:31:12] VERSION="7 (Core)"
[2025-10-13 05:31:12] ID="centos"
[2025-10-13 05:31:12] ID_LIKE="rhel fedora"
[2025-10-13 05:31:12] VERSION_ID="7"
[2025-10-13 05:31:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:31:12] ANSI_COLOR="0;31"
[2025-10-13 05:31:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:31:12] HOME_URL="https://www.centos.org/"
[2025-10-13 05:31:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:31:12] 
[2025-10-13 05:31:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:31:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:31:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:31:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:31:12] 
[2025-10-13 05:31:12] 2025-10-13 06:01:43,968 | INFO     | ***************************************
[2025-10-13 05:31:12] 2025-10-13 06:01:44,471 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 05:31:12] 2025-10-13 06:01:44,508 | INFO     | sufficient remaining disk space (62734204928 B)
[2025-10-13 05:31:12] 2025-10-13 06:01:44,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:31:12] 2025-10-13 06:01:44,508 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:31:12] 2025-10-13 06:01:44,508 | INFO     | update_server=False
[2025-10-13 05:31:12] 2025-10-13 06:01:44,508 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:31:12] 2025-10-13 06:01:44,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:31:12] 2025-10-13 06:01:44,835 | INFO     | all payload control threads have been joined
[2025-10-13 05:31:12] 2025-10-13 06:01:45,229 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:31:12] 2025-10-13 06:01:45,229 | INFO     | aborting loop
[2025-10-13 05:31:12] 2025-10-13 06:01:45,270 | INFO     | all data control threads have been joined
[2025-10-13 05:31:12] 2025-10-13 06:01:45,354 | INFO     | all job control threads have been joined
[2025-10-13 05:31:12] 2025-10-13 06:01:45,515 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:45,547 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:45,812 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:45,852 | INFO     | [payload] control thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:45,880 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:46,111 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:46,211 | INFO     | [job] validate thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:46,235 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:46,276 | INFO     | [data] control thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:46,361 | INFO     | [job] control thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:46,484 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:46,518 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:46,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:31:12] 2025-10-13 06:01:46,775 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:47,030 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:47,581 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:01:47,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:31:12] 2025-10-13 06:01:51,699 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:31:12] 2025-10-13 06:02:15,130 | INFO     | PID=376959 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 05:31:12] 2025-10-13 06:02:15,130 | INFO     | .. there are 28 such processes running
[2025-10-13 05:31:12] 2025-10-13 06:02:15,131 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:31:12] 2025-10-13 06:02:15,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:31:12] 2025-10-13 06:02:15,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:31:12] 2025-10-13 06:02:38,571 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:31:12] 2025-10-13 06:02:39,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140611030255424)>', '<ExcThread(monitor, started 140610073765632)>']
[2025-10-13 05:31:12] 2025-10-13 06:02:39,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:31:12] 2025-10-13 06:02:39,295 | INFO     | [monitor] control thread has ended
[2025-10-13 05:31:12] 2025-10-13 06:02:44,136 | INFO     | all workflow threads have been joined
[2025-10-13 05:31:12] 2025-10-13 06:02:44,137 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:31:12] 2025-10-13 06:02:44,137 | INFO     | traces error code: 0
[2025-10-13 05:31:12] 2025-10-13 06:02:44,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:31:12] 2025-10-13 06:02:44,403 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:31:12] 2025-10-13 06:02:44,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:31:12] 2025-10-13 06:02:44,475 [wrapper] pilotpid: 376959
[2025-10-13 05:31:12] 2025-10-13 06:02:44,500 [wrapper] Pilot exit status: 0
[2025-10-13 05:31:12] 2025-10-13 06:02:44,645 [wrapper] pandaids: 6840536258
[2025-10-13 05:31:12] 2025-10-13 06:02:44,778 [wrapper] cleanup supervisor_pilot 1889393 376960
[2025-10-13 05:31:12] 2025-10-13 06:02:44,791 [wrapper] Test setup, not cleaning
[2025-10-13 05:31:12] 2025-10-13 06:02:44,818 [wrapper] apfmon messages muted
[2025-10-13 05:31:12] 2025-10-13 06:02:44,854 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:31:12] 2025-10-13 06:02:44,870 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:31:12]  *** Error codes and diagnostics ***
[2025-10-13 05:31:12]     "exeErrorCode": 0,
[2025-10-13 05:31:12]     "exeErrorDiag": "",
[2025-10-13 05:31:12]     "pilotErrorCode": 0,
[2025-10-13 05:31:12]     "pilotErrorDiag": "",
[2025-10-13 05:31:12]  *** Listing of results directory ***
[2025-10-13 05:31:12] total 418560
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:36 queuedata.json
[2025-10-13 05:31:12] -rwx------. 1 boincer umatlas     36292 Oct 12 14:36 runpilot2-wrapper.sh
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:31:12] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:11 run_atlas
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:11 job.xml
[2025-10-13 05:31:12] -rw-r--r--. 2 boincer umatlas 218486912 Oct 12 18:11 EVNT.46676267._004412.pool.root.1
[2025-10-13 05:31:12] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 18:11 input.tar.gz
[2025-10-13 05:31:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:11 start_atlas.sh
[2025-10-13 05:31:12] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:11 shared
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:11 boinc_lockfile
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 18:11 pandaJob.out
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas    975528 Oct 12 18:12 agis_schedconf.cvmfs.json
[2025-10-13 05:31:12] drwx------. 5 boincer umatlas      4096 Oct 12 18:12 pilot3
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas       531 Oct 13 02:00 boinc_task_state.xml
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas 198608143 Oct 13 02:00 HITS.46676269._086313.pool.root.1
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas      1040 Oct 13 02:01 memory_monitor_summary.json
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas   1560580 Oct 13 02:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas    648964 Oct 13 02:01 log.46676269._086313.job.log.tgz.1
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas      7828 Oct 13 02:01 heartbeat.json
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas        95 Oct 13 02:02 pilot_heartbeat.json
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas      4823 Oct 13 02:02 pilotlog.txt
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas   3154411 Oct 13 02:02 log.46676269._086313.job.log.1
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas       357 Oct 13 02:02 output.list
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas       620 Oct 13 02:02 runtime_log
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas   3819520 Oct 13 02:02 result.tar.gz
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas      8701 Oct 13 02:02 runtime_log.err
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas       657 Oct 13 02:02 dLOLDmK7FS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm65kNDmO2xwPn.diag
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:31 wrapper_checkpoint.txt
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas      6614 Oct 13 05:31 init_data.xml
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:31 boinc_mmap_file
[2025-10-13 05:31:12] -rw-r--r--. 1 boincer umatlas     21239 Oct 13 05:31 stderr.txt
[2025-10-13 05:31:12] HITS file was successfully produced:
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas 198608143 Oct 13 02:00 shared/HITS.pool.root.1
[2025-10-13 05:31:12]  *** Contents of shared directory: ***
[2025-10-13 05:31:12] total 411636
[2025-10-13 05:31:12] -rw-r--r--. 2 boincer umatlas 218486912 Oct 12 18:11 ATLAS.root_0
[2025-10-13 05:31:12] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 18:11 input.tar.gz
[2025-10-13 05:31:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:11 start_atlas.sh
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas 198608143 Oct 13 02:00 HITS.pool.root.1
[2025-10-13 05:31:12] -rw-------. 1 boincer umatlas   3819520 Oct 13 02:02 result.tar.gz
05:31:13 (372321): run_atlas exited; CPU time 58461.758708
05:31:13 (372321): called boinc_finish(0)

</stderr_txt>
]]>

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