Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:04:20 (206530): wrapper (7.7.26015): starting
20:04:20 (206530): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:04:20] Arguments: --nthreads 8
[2025-10-12 20:04:20] Threads: 8
[2025-10-12 20:04:20] Checking for CVMFS
[2025-10-12 20:04:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:04:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:04:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:04:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:04:22] 2.13.2.0 601499 129956 500960 151641 1 596 31947784 32935936 44577 16776704 0 463443970 99.684 379809448 16722 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 20:04:22] CVMFS is ok
[2025-10-12 20:04:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:04:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:04:22] Further information can be found at the LHC@home message board.
[2025-10-12 20:04:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:04:22] Checking for apptainer binary...
[2025-10-12 20:04:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:04:22] Running /usr/bin/apptainer --version
[2025-10-12 20:04:22] apptainer version 1.4.3-1.el9
[2025-10-12 20:04:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:04:23] c7-16-9.aglt2.org
[2025-10-12 20:04:23] apptainer works
[2025-10-12 20:04:23] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:04:23] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:04:23] Starting ATLAS job with PandaID=6840749542
[2025-10-12 20:04:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:50:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:50:30] 2025-10-13 03:49:32,269 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:50:30] 2025-10-13 03:49:32,273 | INFO     | sum of square deviations: 3301711620.995469
[2025-10-12 23:50:30] 2025-10-13 03:49:32,274 | INFO     | sum of deviations: 56492239084.10005
[2025-10-12 23:50:30] 2025-10-13 03:49:32,275 | INFO     | mean x: 1760320664.5045455
[2025-10-12 23:50:30] 2025-10-13 03:49:32,275 | INFO     | mean y: 2216392.9
[2025-10-12 23:50:30] 2025-10-13 03:49:32,275 | INFO     | -- intersect: -30116845251.22083
[2025-10-12 23:50:30] 2025-10-13 03:49:32,275 | INFO     | intersect: -30116845251.22083
[2025-10-12 23:50:30] 2025-10-13 03:49:32,275 | INFO     | chi2: 3.1633794587257915
[2025-10-12 23:50:30] 2025-10-13 03:49:32,275 | INFO     | sum of square deviations: 3081670590.9953523
[2025-10-12 23:50:30] 2025-10-13 03:49:32,283 | INFO     | sum of deviations: 72114058324.70233
[2025-10-12 23:50:30] 2025-10-13 03:49:32,284 | INFO     | mean x: 1760320512.004651
[2025-10-12 23:50:30] 2025-10-13 03:49:32,284 | INFO     | mean y: 2227044.2976744184
[2025-10-12 23:50:30] 2025-10-13 03:49:32,284 | INFO     | -- intersect: -41190967466.4341
[2025-10-12 23:50:30] 2025-10-13 03:49:32,284 | INFO     | intersect: -41190967466.4341
[2025-10-12 23:50:30] 2025-10-13 03:49:32,284 | INFO     | chi2: 2.3445658406501515
[2025-10-12 23:50:30] 2025-10-13 03:49:32,284 | INFO     | current chi2=2.3445658406501515 (change=25.884141588421954 %)
[2025-10-12 23:50:30] 2025-10-13 03:49:32,285 | INFO     | sum of square deviations: 2871616632.5
[2025-10-12 23:50:30] 2025-10-13 03:49:32,322 | INFO     | sum of deviations: 71037687067.00002
[2025-10-12 23:50:30] 2025-10-13 03:49:32,322 | INFO     | mean x: 1760320359.5
[2025-10-12 23:50:30] 2025-10-13 03:49:32,322 | INFO     | mean y: 2226255.4571428574
[2025-10-12 23:50:30] 2025-10-13 03:49:32,322 | INFO     | -- intersect: -43544354935.27914
[2025-10-12 23:50:30] 2025-10-13 03:49:32,322 | INFO     | intersect: -43544354935.27914
[2025-10-12 23:50:30] 2025-10-13 03:49:32,323 | INFO     | chi2: 2.337820956632
[2025-10-12 23:50:30] 2025-10-13 03:49:32,323 | INFO     | current chi2=2.337820956632 (change=0.28768157844870185 %)
[2025-10-12 23:50:30] 2025-10-13 03:49:32,323 | INFO     | right removable region: 209
[2025-10-12 23:50:30] 2025-10-13 03:49:32,323 | INFO     | sum of square deviations: 3081669980.9953523
[2025-10-12 23:50:30] 2025-10-13 03:49:32,324 | INFO     | sum of deviations: 14195181735.120937
[2025-10-12 23:50:30] 2025-10-13 03:49:32,324 | INFO     | mean x: 1760320817.004651
[2025-10-12 23:50:30] 2025-10-13 03:49:32,324 | INFO     | mean y: 2245536.8790697674
[2025-10-12 23:50:30] 2025-10-13 03:49:32,324 | INFO     | -- intersect: -8106368968.762012
[2025-10-12 23:50:30] 2025-10-13 03:49:32,324 | INFO     | intersect: -8106368968.762012
[2025-10-12 23:50:30] 2025-10-13 03:49:32,325 | INFO     | chi2: 1.1799405256562252
[2025-10-12 23:50:30] 2025-10-13 03:49:32,325 | INFO     | current chi2=1.1799405256562252 (change=62.70000039351887 %)
[2025-10-12 23:50:30] 2025-10-13 03:49:32,329 | INFO     | sum of square deviations: 2871628528.495233
[2025-10-12 23:50:30] 2025-10-13 03:49:32,330 | INFO     | sum of deviations: 2063024549.6857166
[2025-10-12 23:50:30] 2025-10-13 03:49:32,330 | INFO     | mean x: 1760320969.504762
[2025-10-12 23:50:30] 2025-10-13 03:49:32,330 | INFO     | mean y: 2254303.314285714
[2025-10-12 23:50:30] 2025-10-13 03:49:32,330 | INFO     | -- intersect: -1262388856.2652295
[2025-10-12 23:50:30] 2025-10-13 03:49:32,331 | INFO     | intersect: -1262388856.2652295
[2025-10-12 23:50:30] 2025-10-13 03:49:32,331 | INFO     | chi2: 1.0345403838756126
[2025-10-12 23:50:30] 2025-10-13 03:49:32,331 | INFO     | current chi2=1.0345403838756126 (change=12.322667000503955 %)
[2025-10-12 23:50:30] 2025-10-13 03:49:32,331 | INFO     | left removable region: 20
[2025-10-12 23:50:30] 2025-10-13 03:49:32,331 | INFO     | sum of square deviations: 2093397390.0
[2025-10-12 23:50:30] 2025-10-13 03:49:32,332 | INFO     | sum of deviations: 7623671481.000001
[2025-10-12 23:50:30] 2025-10-13 03:49:32,332 | INFO     | mean x: 1760320939.0
[2025-10-12 23:50:30] 2025-10-13 03:49:32,332 | INFO     | mean y: 2276617.1534391535
[2025-10-12 23:50:30] 2025-10-13 03:49:32,332 | INFO     | -- intersect: -6408407089.709041
[2025-10-12 23:50:30] 2025-10-13 03:49:32,332 | INFO     | intersect: -6408407089.709041
[2025-10-12 23:50:30] 2025-10-13 03:49:32,333 | INFO     | chi2: 0.04900024129855051
[2025-10-12 23:50:30] 2025-10-13 03:49:32,333 | INFO     | -- intersect: -6408407089.709041
[2025-10-12 23:50:30] 2025-10-13 03:49:32,333 | INFO     | current memory leak: 3.64 B/s (using 189 data points, chi2=0.05)
[2025-10-12 23:50:30] 2025-10-13 03:49:32,347 | INFO     | could have reported an average CPU frequency of 3262 MHz (11 samples)
[2025-10-12 23:50:30] 2025-10-13 03:49:32,348 | INFO     | ..............................
[2025-10-12 23:50:30] 2025-10-13 03:49:32,348 | INFO     | . Timing measurements:
[2025-10-12 23:50:30] 2025-10-13 03:49:32,348 | INFO     | . get job = 0 s
[2025-10-12 23:50:30] 2025-10-13 03:49:32,348 | INFO     | . initial setup = 3 s
[2025-10-12 23:50:30] 2025-10-13 03:49:32,348 | INFO     | . payload setup = 26 s
[2025-10-12 23:50:30] 2025-10-13 03:49:32,348 | INFO     | . stage-in = 0 s
[2025-10-12 23:50:30] 2025-10-13 03:49:32,348 | INFO     | . payload execution = 13378 s
[2025-10-12 23:50:30] 2025-10-13 03:49:32,348 | INFO     | . stage-out = 4 s
[2025-10-12 23:50:30] 2025-10-13 03:49:32,348 | INFO     | . log creation = 0 s
[2025-10-12 23:50:30] 2025-10-13 03:49:32,348 | INFO     | ..............................
[2025-10-12 23:50:30] 2025-10-13 03:49:32,621 | INFO     | PID=210809 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:50:30] 2025-10-13 03:49:32,653 | INFO     | .. there are 57 such processes running
[2025-10-12 23:50:30] 2025-10-13 03:49:32,688 | INFO     | 
[2025-10-12 23:50:30] 2025-10-13 03:49:32,698 | INFO     | job summary report
[2025-10-12 23:50:30] 2025-10-13 03:49:32,698 | INFO     | --------------------------------------------------
[2025-10-12 23:50:30] 2025-10-13 03:49:32,698 | INFO     | PanDA job id: 6840749542
[2025-10-12 23:50:30] 2025-10-13 03:49:32,698 | INFO     | task id: 46676269
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | errors: (none)
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | pilot state: finished 
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | transexitcode: 0
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | exeerrorcode: 0
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | exeerrordiag: 
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | exitcode: 0
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | exitmsg: OK
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | cpuconsumptiontime: 31986 s
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | nevents: 400
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | neventsw: 0
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | pid: 226733
[2025-10-12 23:50:30] 2025-10-13 03:49:32,699 | INFO     | pgrp: 226733
[2025-10-12 23:50:30] 2025-10-13 03:49:32,700 | INFO     | corecount: 8
[2025-10-12 23:50:30] 2025-10-13 03:49:32,700 | INFO     | event service: False
[2025-10-12 23:50:30] 2025-10-13 03:49:32,700 | INFO     | sizes: {0: 2348857, 11: 2348857, 17: 2349147, 22: 2349175, 13409: 2379554, 13410: 2379553, 13416: 2388735, 13419: 2388791, 13431: 2388985}
[2025-10-12 23:50:30] 2025-10-13 03:49:32,700 | INFO     | --------------------------------------------------
[2025-10-12 23:50:30] 2025-10-13 03:49:32,700 | INFO     | 
[2025-10-12 23:50:30] 2025-10-13 03:49:32,700 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 23:50:30] 2025-10-13 03:49:32,836 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,837 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:50:30] 2025-10-13 03:49:32,838 | INFO     | job 6840749542 has completed (purged errors)
[2025-10-12 23:50:30] 2025-10-13 03:49:32,838 | INFO     | overall cleanup function is called
[2025-10-12 23:50:30] 2025-10-13 03:49:33,871 | INFO     | --- collectZombieJob: --- 10, [226733]
[2025-10-12 23:50:30] 2025-10-13 03:49:33,871 | INFO     | zombie collector waiting for pid 226733
[2025-10-12 23:50:30] 2025-10-13 03:49:33,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:50:30] 2025-10-13 03:49:33,871 | INFO     | collected zombie processes
[2025-10-12 23:50:30] 2025-10-13 03:49:33,872 | INFO     | will attempt to kill all subprocesses of pid=226733
[2025-10-12 23:50:30] 2025-10-13 03:49:35,753 | INFO     | process IDs to be killed: [226733] (in reverse order)
[2025-10-12 23:50:30] 2025-10-13 03:49:35,986 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:50:30] 2025-10-13 03:49:35,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:50:30] 2025-10-13 03:49:36,029 | INFO     | did not find any defunct processes belonging to 226733
[2025-10-12 23:50:30] 2025-10-13 03:49:36,151 | INFO     | did not find any defunct processes belonging to 226733
[2025-10-12 23:50:30] 2025-10-13 03:49:36,152 | INFO     | ready for new job
[2025-10-12 23:50:30] 2025-10-13 03:49:36,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:50:30] 2025-10-13 03:49:36,187 | INFO     | ***************************************
[2025-10-12 23:50:30] 2025-10-13 03:49:36,187 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:50:30] 2025-10-13 03:49:36,187 | INFO     | ***************************************
[2025-10-12 23:50:30] 2025-10-13 03:49:36,187 | INFO     | 
[2025-10-12 23:50:30] 2025-10-13 03:49:36,236 | INFO     | architecture information:
[2025-10-12 23:50:30] 2025-10-13 03:49:36,300 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:50:30] 2025-10-13 03:49:36,383 | INFO     | cat /etc/os-release:
[2025-10-12 23:50:30] NAME="CentOS Linux"
[2025-10-12 23:50:30] VERSION="7 (Core)"
[2025-10-12 23:50:30] ID="centos"
[2025-10-12 23:50:30] ID_LIKE="rhel fedora"
[2025-10-12 23:50:30] VERSION_ID="7"
[2025-10-12 23:50:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:50:30] ANSI_COLOR="0;31"
[2025-10-12 23:50:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:50:30] HOME_URL="https://www.centos.org/"
[2025-10-12 23:50:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:50:30] 
[2025-10-12 23:50:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:50:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:50:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:50:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:50:30] 
[2025-10-12 23:50:30] 2025-10-13 03:49:36,384 | INFO     | ***************************************
[2025-10-12 23:50:30] 2025-10-13 03:49:36,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 23:50:30] 2025-10-13 03:49:36,944 | INFO     | sufficient remaining disk space (73843867648 B)
[2025-10-12 23:50:30] 2025-10-13 03:49:36,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:50:30] 2025-10-13 03:49:36,945 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:50:30] 2025-10-13 03:49:36,945 | INFO     | update_server=False
[2025-10-12 23:50:30] 2025-10-13 03:49:36,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:50:30] 2025-10-13 03:49:36,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:50:30] 2025-10-13 03:49:36,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:50:30] 2025-10-13 03:49:37,097 | INFO     | all payload control threads have been joined
[2025-10-12 23:50:30] 2025-10-13 03:49:37,278 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:50:30] 2025-10-13 03:49:37,278 | INFO     | aborting loop
[2025-10-12 23:50:30] 2025-10-13 03:49:37,439 | INFO     | all data control threads have been joined
[2025-10-12 23:50:30] 2025-10-13 03:49:37,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:50:30] 2025-10-13 03:49:37,738 | INFO     | all job control threads have been joined
[2025-10-12 23:50:30] 2025-10-13 03:49:37,957 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,103 | INFO     | [payload] control thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,284 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,452 | INFO     | [data] control thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,561 | INFO     | [job] validate thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,610 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,635 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,712 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,736 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,744 | INFO     | [job] control thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,778 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,782 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,828 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:38,952 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:40,975 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:50:30] 2025-10-13 03:49:58,773 [wrapper] supervise_pilot (15 min periods counter: 16)
[2025-10-12 23:50:30] 2025-10-13 03:50:08,864 | INFO     | PID=210809 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 23:50:30] 2025-10-13 03:50:08,865 | INFO     | .. there are 57 such processes running
[2025-10-12 23:50:30] 2025-10-13 03:50:08,866 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:50:30] 2025-10-13 03:50:08,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:50:30] 2025-10-13 03:50:08,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:50:30] 2025-10-13 03:50:23,922 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:50:30] 2025-10-13 03:50:24,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140627813750592)>', '<ExcThread(monitor, started 140626951661312)>']
[2025-10-12 23:50:30] 2025-10-13 03:50:25,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:50:30] 2025-10-13 03:50:25,023 | INFO     | [monitor] control thread has ended
[2025-10-12 23:50:30] 2025-10-13 03:50:29,195 | INFO     | all workflow threads have been joined
[2025-10-12 23:50:30] 2025-10-13 03:50:29,196 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:50:30] 2025-10-13 03:50:29,196 | INFO     | traces error code: 0
[2025-10-12 23:50:30] 2025-10-13 03:50:29,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:50:30] 2025-10-13 03:50:29,631 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:50:30] 2025-10-13 03:50:29,703 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:50:30] 2025-10-13 03:50:29,743 [wrapper] pilotpid: 210809
[2025-10-12 23:50:30] 2025-10-13 03:50:29,844 [wrapper] Pilot exit status: 0
[2025-10-12 23:50:30] 2025-10-13 03:50:29,946 [wrapper] pandaids: 6840749542
[2025-10-12 23:50:30] 2025-10-13 03:50:30,342 [wrapper] cleanup supervisor_pilot 1583612 210810
[2025-10-12 23:50:30] 2025-10-13 03:50:30,347 [wrapper] Test setup, not cleaning
[2025-10-12 23:50:30] 2025-10-13 03:50:30,356 [wrapper] apfmon messages muted
[2025-10-12 23:50:30] 2025-10-13 03:50:30,384 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:50:30] 2025-10-13 03:50:30,406 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:50:30]  *** Error codes and diagnostics ***
[2025-10-12 23:50:30]     "exeErrorCode": 0,
[2025-10-12 23:50:30]     "exeErrorDiag": "",
[2025-10-12 23:50:30]     "pilotErrorCode": 0,
[2025-10-12 23:50:30]     "pilotErrorDiag": "",
[2025-10-12 23:50:30]  *** Listing of results directory ***
[2025-10-12 23:50:30] total 416212
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:40 queuedata.json
[2025-10-12 23:50:30] -rwx------. 1 boincer umatlas     36292 Oct 12 16:40 runpilot2-wrapper.sh
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:50:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:04 run_atlas
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:04 job.xml
[2025-10-12 23:50:30] -rw-r--r--. 2 boincer umatlas 219960098 Oct 12 20:04 EVNT.46676267._004858.pool.root.1
[2025-10-12 23:50:30] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 20:04 input.tar.gz
[2025-10-12 23:50:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:04 start_atlas.sh
[2025-10-12 23:50:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:04 shared
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:04 boinc_lockfile
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 20:04 pandaJob.out
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas    975603 Oct 12 20:04 agis_schedconf.cvmfs.json
[2025-10-12 23:50:30] drwx------. 5 boincer umatlas      4096 Oct 12 20:05 pilot3
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas 197850121 Oct 12 23:48 HITS.46676269._088974.pool.root.1
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas       530 Oct 12 23:48 boinc_task_state.xml
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas      6936 Oct 12 23:48 init_data.xml
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas      1061 Oct 12 23:49 memory_monitor_summary.json
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas    456572 Oct 12 23:49 log.46676269._088974.job.log.tgz.1
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas      7800 Oct 12 23:49 heartbeat.json
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas        95 Oct 12 23:50 pilot_heartbeat.json
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas        28 Oct 12 23:50 wrapper_checkpoint.txt
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas      4823 Oct 12 23:50 pilotlog.txt
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas   1782973 Oct 12 23:50 log.46676269._088974.job.log.1
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas       357 Oct 12 23:50 output.list
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:50 runtime_log
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas   2263040 Oct 12 23:50 result.tar.gz
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:50 boinc_mmap_file
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas       656 Oct 12 23:50 rYzKDmu2HS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmOzUMDmo65dTm.diag
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 23:50 runtime_log.err
[2025-10-12 23:50:30] -rw-r--r--. 1 boincer umatlas     21077 Oct 12 23:50 stderr.txt
[2025-10-12 23:50:30] HITS file was successfully produced:
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas 197850121 Oct 12 23:48 shared/HITS.pool.root.1
[2025-10-12 23:50:30]  *** Contents of shared directory: ***
[2025-10-12 23:50:30] total 410816
[2025-10-12 23:50:30] -rw-r--r--. 2 boincer umatlas 219960098 Oct 12 20:04 ATLAS.root_0
[2025-10-12 23:50:30] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 20:04 input.tar.gz
[2025-10-12 23:50:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:04 start_atlas.sh
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas 197850121 Oct 12 23:48 HITS.pool.root.1
[2025-10-12 23:50:30] -rw-------. 1 boincer umatlas   2263040 Oct 12 23:50 result.tar.gz
23:50:32 (206530): run_atlas exited; CPU time 32632.399952
23:50:32 (206530): called boinc_finish(0)

</stderr_txt>
]]>

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