Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:09 (213352): wrapper (7.7.26015): starting
18:10:09 (213352): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:10:09] Arguments: --nthreads 8
[2025-10-12 18:10:09] Threads: 8
[2025-10-12 18:10:09] Checking for CVMFS
[2025-10-12 18:10:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:10:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:10:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:10:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:10:11] 2.13.2.0 8406 37087 89984 151639 1 346 26874705 40960001 26975 16776704 0 232985352 99.853 82144305 48869 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:10:11] CVMFS is ok
[2025-10-12 18:10:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:10:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:10:11] Further information can be found at the LHC@home message board.
[2025-10-12 18:10:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:10:11] Checking for apptainer binary...
[2025-10-12 18:10:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:10:11] Running /usr/bin/apptainer --version
[2025-10-12 18:10:11] apptainer version 1.4.3-1.el9
[2025-10-12 18:10:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:10:11] c-208-37.aglt2.org
[2025-10-12 18:10:11] apptainer works
[2025-10-12 18:10:11] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:10:11] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:10:11] Starting ATLAS job with PandaID=6840749450
[2025-10-12 18:10:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:55:59]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:55:59] 2025-10-12 23:54:54,928 | INFO     | -- intersect: -58669812549.801796
[2025-10-12 19:55:59] 2025-10-12 23:54:54,928 | INFO     | intersect: -58669812549.801796
[2025-10-12 19:55:59] 2025-10-12 23:54:54,928 | INFO     | chi2: 2.2830938840085038
[2025-10-12 19:55:59] 2025-10-12 23:54:54,928 | INFO     | sum of square deviations: 274308217.9583326
[2025-10-12 19:55:59] 2025-10-12 23:54:54,928 | INFO     | sum of deviations: 16201681388.0
[2025-10-12 19:55:59] 2025-10-12 23:54:54,928 | INFO     | mean x: 1760310073.5208333
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | mean y: 2448651.5
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | -- intersect: -103968125644.6138
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | intersect: -103968125644.6138
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | chi2: 1.6007501247502047
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | current chi2=1.6007501247502047 (change=29.88680246737315 %)
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | sum of square deviations: 233638297.95604375
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | sum of deviations: 15405872333.373621
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | mean x: 1760309921.0219781
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | mean y: 2445664.813186813
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | -- intersect: -116070604634.23383
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | intersect: -116070604634.23383
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | chi2: 1.6023218798290062
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | current chi2=1.6023218798290062 (change=-0.09818865883560333 %)
[2025-10-12 19:55:59] 2025-10-12 23:54:54,929 | INFO     | right removable region: 90
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | sum of square deviations: 274306997.9583326
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | sum of deviations: -5667595390.958334
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | mean x: 1760310378.5208333
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | mean y: 2484796.4791666665
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | -- intersect: 36373146362.59884
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | intersect: 36373146362.59884
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | chi2: 0.7317019150944067
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | current chi2=0.7317019150944067 (change=67.95129975952923 %)
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | sum of square deviations: 233635857.95604375
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | sum of deviations: -6444270243.142858
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | mean x: 1760310531.0219781
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | mean y: 2487560.5714285714
[2025-10-12 19:55:59] 2025-10-12 23:54:54,930 | INFO     | -- intersect: 48556322031.86298
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | intersect: 48556322031.86298
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | chi2: 0.7150850391746325
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | current chi2=0.7150850391746325 (change=2.2709898084153934 %)
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | left removable region: 20
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | sum of square deviations: 106331267.44285706
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | sum of deviations: -435367712.2285715
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | mean x: 1760310500.5285714
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | mean y: 2511080.1142857145
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | -- intersect: 7210008685.077127
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | intersect: 7210008685.077127
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | chi2: 0.00037471719555844964
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | -- intersect: 7210008685.077127
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | current memory leak: -4.09 B/s (using 70 data points, chi2=0.00)
[2025-10-12 19:55:59] 2025-10-12 23:54:54,931 | INFO     | could have reported an average CPU frequency of 3696 MHz (7 samples)
[2025-10-12 19:55:59] 2025-10-12 23:54:54,932 | INFO     | ..............................
[2025-10-12 19:55:59] 2025-10-12 23:54:54,932 | INFO     | . Timing measurements:
[2025-10-12 19:55:59] 2025-10-12 23:54:54,932 | INFO     | . get job = 0 s
[2025-10-12 19:55:59] 2025-10-12 23:54:54,932 | INFO     | . initial setup = 2 s
[2025-10-12 19:55:59] 2025-10-12 23:54:54,932 | INFO     | . payload setup = 37 s
[2025-10-12 19:55:59] 2025-10-12 23:54:54,932 | INFO     | . stage-in = 0 s
[2025-10-12 19:55:59] 2025-10-12 23:54:54,932 | INFO     | . payload execution = 6123 s
[2025-10-12 19:55:59] 2025-10-12 23:54:54,932 | INFO     | . stage-out = 0 s
[2025-10-12 19:55:59] 2025-10-12 23:54:54,932 | INFO     | . log creation = 0 s
[2025-10-12 19:55:59] 2025-10-12 23:54:54,932 | INFO     | ..............................
[2025-10-12 19:55:59] 2025-10-12 23:54:54,988 | INFO     | 
[2025-10-12 19:55:59] 2025-10-12 23:54:54,988 | INFO     | job summary report
[2025-10-12 19:55:59] 2025-10-12 23:54:54,988 | INFO     | --------------------------------------------------
[2025-10-12 19:55:59] 2025-10-12 23:54:54,988 | INFO     | PanDA job id: 6840749450
[2025-10-12 19:55:59] 2025-10-12 23:54:54,988 | INFO     | task id: 46676269
[2025-10-12 19:55:59] 2025-10-12 23:54:54,988 | INFO     | errors: (none)
[2025-10-12 19:55:59] 2025-10-12 23:54:54,988 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | pilot state: finished 
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | transexitcode: 0
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | exeerrorcode: 0
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | exeerrordiag: 
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | exitcode: 0
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | exitmsg: OK
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | cpuconsumptiontime: 24534 s
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | nevents: 400
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | neventsw: 0
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | pid: 231057
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | pgrp: 231057
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | corecount: 8
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | event service: False
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348885, 12: 2348913, 23: 2348941, 34: 2349025, 35: 2349387, 45: 2349415, 6165: 2376469, 6166: 2385467, 6168: 2385523, 6176: 238
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | --------------------------------------------------
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | 
[2025-10-12 19:55:59] 2025-10-12 23:54:54,989 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 19:55:59] 2025-10-12 23:54:55,017 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,019 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:55:59] 2025-10-12 23:54:55,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,019 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:55:59] 2025-10-12 23:54:55,019 | INFO     | job 6840749450 has completed (purged errors)
[2025-10-12 19:55:59] 2025-10-12 23:54:55,019 | INFO     | overall cleanup function is called
[2025-10-12 19:55:59] 2025-10-12 23:54:55,025 | INFO     | sufficient remaining disk space (169178300416 B)
[2025-10-12 19:55:59] 2025-10-12 23:54:55,025 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-10-12 19:55:59] 2025-10-12 23:54:55,025 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/3/PanDA_Pilot-6840749450/HITS.46676269._088882.pool.root.1 since it does not exist
[2025-10-12 19:55:59] 2025-10-12 23:54:56,030 | INFO     | --- collectZombieJob: --- 10, [231057]
[2025-10-12 19:55:59] 2025-10-12 23:54:56,030 | INFO     | zombie collector waiting for pid 231057
[2025-10-12 19:55:59] 2025-10-12 23:54:56,030 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:55:59] 2025-10-12 23:54:56,031 | INFO     | collected zombie processes
[2025-10-12 19:55:59] 2025-10-12 23:54:56,031 | INFO     | will attempt to kill all subprocesses of pid=231057
[2025-10-12 19:55:59] 2025-10-12 23:54:56,698 | INFO     | number of running child processes to parent process 231057: 1
[2025-10-12 19:55:59] 2025-10-12 23:54:56,698 | INFO     | maximum number of monitored processes: 6
[2025-10-12 19:55:59] 2025-10-12 23:54:56,698 | INFO     | aborting job monitoring since job object (job id=6840749450) has expired
[2025-10-12 19:55:59] 2025-10-12 23:54:56,799 | INFO     | process IDs to be killed: [231057] (in reverse order)
[2025-10-12 19:55:59] 2025-10-12 23:54:56,934 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:55:59] 2025-10-12 23:54:56,934 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:55:59] 2025-10-12 23:54:56,953 | INFO     | did not find any defunct processes belonging to 231057
[2025-10-12 19:55:59] 2025-10-12 23:54:56,972 | INFO     | did not find any defunct processes belonging to 231057
[2025-10-12 19:55:59] 2025-10-12 23:54:56,972 | INFO     | ready for new job
[2025-10-12 19:55:59] 2025-10-12 23:54:56,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:55:59] 2025-10-12 23:54:56,973 | INFO     | ***************************************
[2025-10-12 19:55:59] 2025-10-12 23:54:56,973 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:55:59] 2025-10-12 23:54:56,973 | INFO     | ***************************************
[2025-10-12 19:55:59] 2025-10-12 23:54:56,973 | INFO     | 
[2025-10-12 19:55:59] 2025-10-12 23:54:56,978 | INFO     | architecture information:
[2025-10-12 19:55:59] 2025-10-12 23:54:56,978 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:55:59] 2025-10-12 23:54:56,993 | INFO     | cat /etc/os-release:
[2025-10-12 19:55:59] NAME="CentOS Linux"
[2025-10-12 19:55:59] VERSION="7 (Core)"
[2025-10-12 19:55:59] ID="centos"
[2025-10-12 19:55:59] ID_LIKE="rhel fedora"
[2025-10-12 19:55:59] VERSION_ID="7"
[2025-10-12 19:55:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:55:59] ANSI_COLOR="0;31"
[2025-10-12 19:55:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:55:59] HOME_URL="https://www.centos.org/"
[2025-10-12 19:55:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:55:59] 
[2025-10-12 19:55:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:55:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:55:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:55:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:55:59] 
[2025-10-12 19:55:59] 2025-10-12 23:54:56,994 | INFO     | ***************************************
[2025-10-12 19:55:59] 2025-10-12 23:54:57,497 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 19:55:59] 2025-10-12 23:54:57,521 | INFO     | sufficient remaining disk space (169180397568 B)
[2025-10-12 19:55:59] 2025-10-12 23:54:57,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:55:59] 2025-10-12 23:54:57,521 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:55:59] 2025-10-12 23:54:57,521 | INFO     | update_server=False
[2025-10-12 19:55:59] 2025-10-12 23:54:57,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:55:59] 2025-10-12 23:54:57,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:55:59] 2025-10-12 23:54:57,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:55:59] 2025-10-12 23:54:57,523 | INFO     | will abort loop
[2025-10-12 19:55:59] 2025-10-12 23:54:57,677 | INFO     | all payload control threads have been joined
[2025-10-12 19:55:59] 2025-10-12 23:54:57,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:55:59] 2025-10-12 23:54:57,870 | INFO     | all data control threads have been joined
[2025-10-12 19:55:59] 2025-10-12 23:54:58,375 | INFO     | all job control threads have been joined
[2025-10-12 19:55:59] 2025-10-12 23:54:58,527 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:58,528 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:58,683 | INFO     | [payload] control thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:58,875 | INFO     | [data] control thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:59,028 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:59,209 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:59,263 | INFO     | [job] validate thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:59,264 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:59,381 | INFO     | [job] control thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:59,439 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:59,837 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:59,847 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:54:59,983 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:55:00,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:55:59] 2025-10-12 23:55:01,013 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:55:01,529 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:55:07,938 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:55:59] 2025-10-12 23:55:08,944 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:55:59] 2025-10-12 23:55:27,228 | INFO     | PID=218895 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 19:55:59] 2025-10-12 23:55:27,228 | INFO     | .. there are 23 such processes running
[2025-10-12 19:55:59] 2025-10-12 23:55:27,228 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:55:59] 2025-10-12 23:55:27,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:55:59] 2025-10-12 23:55:27,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:55:59] 2025-10-12 23:55:39,881 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-12 19:55:59] 2025-10-12 23:55:53,456 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:55:59] 2025-10-12 23:55:53,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293268797248)>', '<ExcThread(monitor, started 140292908881664)>']
[2025-10-12 19:55:59] 2025-10-12 23:55:54,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:55:59] 2025-10-12 23:55:54,393 | INFO     | [monitor] control thread has ended
[2025-10-12 19:55:59] 2025-10-12 23:55:58,510 | INFO     | all workflow threads have been joined
[2025-10-12 19:55:59] 2025-10-12 23:55:58,510 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:55:59] 2025-10-12 23:55:58,511 | INFO     | traces error code: 0
[2025-10-12 19:55:59] 2025-10-12 23:55:58,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:55:59] 2025-10-12 23:55:58,650 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:55:59] 2025-10-12 23:55:58,655 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:55:59] 2025-10-12 23:55:58,658 [wrapper] pilotpid: 218895
[2025-10-12 19:55:59] 2025-10-12 23:55:58,661 [wrapper] Pilot exit status: 0
[2025-10-12 19:55:59] 2025-10-12 23:55:58,678 [wrapper] pandaids: 6840749450
[2025-10-12 19:55:59] 2025-10-12 23:55:58,788 [wrapper] cleanup supervisor_pilot  594394 218896
[2025-10-12 19:55:59] 2025-10-12 23:55:58,795 [wrapper] Test setup, not cleaning
[2025-10-12 19:55:59] 2025-10-12 23:55:58,798 [wrapper] apfmon messages muted
[2025-10-12 19:55:59] 2025-10-12 23:55:58,801 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:55:59] 2025-10-12 23:55:58,805 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:55:59]  *** Error codes and diagnostics ***
[2025-10-12 19:55:59]     "exeErrorCode": 0,
[2025-10-12 19:55:59]     "exeErrorDiag": "",
[2025-10-12 19:55:59]     "pilotErrorCode": 0,
[2025-10-12 19:55:59]     "pilotErrorDiag": "",
[2025-10-12 19:55:59]  *** Listing of results directory ***
[2025-10-12 19:55:59] total 409836
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:38 queuedata.json
[2025-10-12 19:55:59] -rwx------. 1 boincer umatlas     36292 Oct 12 16:38 runpilot2-wrapper.sh
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:55:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:10 run_atlas
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:10 job.xml
[2025-10-12 19:55:59] -rw-r--r--. 2 boincer umatlas 221309483 Oct 12 18:10 EVNT.46676267._004854.pool.root.1
[2025-10-12 19:55:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:10 start_atlas.sh
[2025-10-12 19:55:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:10 shared
[2025-10-12 19:55:59] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 18:10 input.tar.gz
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:10 boinc_lockfile
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 18:10 pandaJob.out
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas    975528 Oct 12 18:10 agis_schedconf.cvmfs.json
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:55:59] drwx------. 5 boincer umatlas      4096 Oct 12 18:10 pilot3
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas 192042079 Oct 12 19:54 HITS.46676269._088882.pool.root.1
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas       530 Oct 12 19:54 boinc_task_state.xml
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas      7174 Oct 12 19:54 init_data.xml
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas        95 Oct 12 19:54 pilot_heartbeat.json
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas      1048 Oct 12 19:54 memory_monitor_summary.json
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas    363164 Oct 12 19:54 log.46676269._088882.job.log.tgz.1
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas      7802 Oct 12 19:54 heartbeat.json
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas        27 Oct 12 19:55 wrapper_checkpoint.txt
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 19:55 boinc_mmap_file
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas      4898 Oct 12 19:55 pilotlog.txt
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas    844434 Oct 12 19:55 log.46676269._088882.job.log.1
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas       357 Oct 12 19:55 output.list
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas       620 Oct 12 19:55 runtime_log
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas   1228800 Oct 12 19:55 result.tar.gz
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 19:55 runtime_log.err
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas       657 Oct 12 19:55 ab3MDmh0HS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvyUMDmVdEoWo.diag
[2025-10-12 19:55:59] -rw-r--r--. 1 boincer umatlas     20994 Oct 12 19:55 stderr.txt
[2025-10-12 19:55:59] HITS file was successfully produced:
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas 192042079 Oct 12 19:54 shared/HITS.pool.root.1
[2025-10-12 19:55:59]  *** Contents of shared directory: ***
[2025-10-12 19:55:59] total 405448
[2025-10-12 19:55:59] -rw-r--r--. 2 boincer umatlas 221309483 Oct 12 18:10 ATLAS.root_0
[2025-10-12 19:55:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:10 start_atlas.sh
[2025-10-12 19:55:59] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 18:10 input.tar.gz
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas 192042079 Oct 12 19:54 HITS.pool.root.1
[2025-10-12 19:55:59] -rw-------. 1 boincer umatlas   1228800 Oct 12 19:55 result.tar.gz
19:56:01 (213352): run_atlas exited; CPU time 24672.926715
19:56:01 (213352): called boinc_finish(0)

</stderr_txt>
]]>

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