Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:49:02 (2142456): wrapper (7.7.26015): starting
19:49:02 (2142456): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:49:02] Arguments: --nthreads 8
[2025-10-12 19:49:02] Threads: 8
[2025-10-12 19:49:02] Checking for CVMFS
[2025-10-12 19:49:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:49:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:49:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:49:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:49:23] 2.13.1.0 5299 6358 110832 151641 2 65 21685167 40960000 10634 16776704 0 10877852 99.848 2447569 36379 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:49:23] CVMFS is ok
[2025-10-12 19:49:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:49:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:49:23] Further information can be found at the LHC@home message board.
[2025-10-12 19:49:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:49:23] Checking for apptainer binary...
[2025-10-12 19:49:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:49:23] Running /usr/bin/apptainer --version
[2025-10-12 19:49:23] apptainer version 1.4.3-1.el9
[2025-10-12 19:49:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:49:24] c-210-33-2.aglt2.org
[2025-10-12 19:49:24] apptainer works
[2025-10-12 19:49:24] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:49:24] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:49:24] Starting ATLAS job with PandaID=6840428671
[2025-10-12 19:49:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:29:26 (2416146): wrapper (7.7.26015): starting
23:29:26 (2416146): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 23:29:26] Arguments: --nthreads 10
[2025-10-12 23:29:26] Threads: 10
[2025-10-12 23:29:26] This job has been restarted, cleaning up previous attempt
[2025-10-12 23:29:26] Checking for CVMFS
[2025-10-12 23:29:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:29:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:29:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:29:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:29:28] 2.13.1.0 5299 6578 112228 151647 2 24 21880448 40960000 11095 16776704 0 11079516 99.851 2455534 36370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 23:29:28] CVMFS is ok
[2025-10-12 23:29:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:29:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:29:28] Further information can be found at the LHC@home message board.
[2025-10-12 23:29:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:29:28] Checking for apptainer binary...
[2025-10-12 23:29:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:29:28] Running /usr/bin/apptainer --version
[2025-10-12 23:29:28] apptainer version 1.4.3-1.el9
[2025-10-12 23:29:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:29:28] c-210-33-2.aglt2.org
[2025-10-12 23:29:28] apptainer works
[2025-10-12 23:29:28] Set ATHENA_PROC_NUMBER=10
[2025-10-12 23:29:28] Set ATHENA_CORE_NUMBER=10
[2025-10-12 23:29:28] Starting ATLAS job with PandaID=6840428671
[2025-10-12 23:29:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:49:49]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:49:49] 2025-10-13 07:48:42,846 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:49:49] 2025-10-13 07:48:42,866 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 03:49:49] 2025-10-13 07:48:42,869 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2598.609553571429
[2025-10-13 03:49:49] 2025-10-13 07:48:42,879 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840428671/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:49:49] 2025-10-13 07:48:42,879 | INFO     | extracted standard info from prmon json
[2025-10-13 03:49:49] 2025-10-13 07:48:42,879 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:49:49] 2025-10-13 07:48:42,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:49:49] 2025-10-13 07:48:42,880 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:49:49] 2025-10-13 07:48:42,880 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:49:49] 2025-10-13 07:48:42,886 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:49:49] 2025-10-13 07:48:42,887 | INFO     | sum of square deviations: 5081623103.43308
[2025-10-13 03:49:49] 2025-10-13 07:48:42,889 | INFO     | sum of deviations: 22760371862.047245
[2025-10-13 03:49:49] 2025-10-13 07:48:42,889 | INFO     | mean x: 1760333959.952756
[2025-10-13 03:49:49] 2025-10-13 07:48:42,889 | INFO     | mean y: 2603523.503937008
[2025-10-13 03:49:49] 2025-10-13 07:48:42,889 | INFO     | -- intersect: -7881856759.0477
[2025-10-13 03:49:49] 2025-10-13 07:48:42,889 | INFO     | intersect: -7881856759.0477
[2025-10-13 03:49:49] 2025-10-13 07:48:42,890 | INFO     | chi2: 1.8675038670204283
[2025-10-13 03:49:49] 2025-10-13 07:48:42,890 | INFO     | sum of square deviations: 4787494240.080312
[2025-10-13 03:49:49] 2025-10-13 07:48:42,892 | INFO     | sum of deviations: 21925844884.228943
[2025-10-13 03:49:49] 2025-10-13 07:48:42,892 | INFO     | mean x: 1760333807.4738955
[2025-10-13 03:49:49] 2025-10-13 07:48:42,892 | INFO     | mean y: 2603094.6506024096
[2025-10-13 03:49:49] 2025-10-13 07:48:42,892 | INFO     | -- intersect: -8059402637.702884
[2025-10-13 03:49:49] 2025-10-13 07:48:42,892 | INFO     | intersect: -8059402637.702884
[2025-10-13 03:49:49] 2025-10-13 07:48:42,893 | INFO     | chi2: 1.867658919165439
[2025-10-13 03:49:49] 2025-10-13 07:48:42,893 | INFO     | current chi2=1.867658919165439 (change=-0.008302641175144777 %)
[2025-10-13 03:49:49] 2025-10-13 07:48:42,893 | INFO     | right removable region: 248
[2025-10-13 03:49:49] 2025-10-13 07:48:42,893 | INFO     | sum of square deviations: 4787300380.168639
[2025-10-13 03:49:49] 2025-10-13 07:48:42,895 | INFO     | sum of deviations: -24329392446.74701
[2025-10-13 03:49:49] 2025-10-13 07:48:42,895 | INFO     | mean x: 1760334112.4819276
[2025-10-13 03:49:49] 2025-10-13 07:48:42,896 | INFO     | mean y: 2627740.7228915663
[2025-10-13 03:49:49] 2025-10-13 07:48:42,896 | INFO     | -- intersect: 8948767748.436432
[2025-10-13 03:49:49] 2025-10-13 07:48:42,896 | INFO     | intersect: 8948767748.436432
[2025-10-13 03:49:49] 2025-10-13 07:48:42,896 | INFO     | chi2: 0.12103188181717424
[2025-10-13 03:49:49] 2025-10-13 07:48:42,896 | INFO     | current chi2=0.12103188181717424 (change=93.51905589302588 %)
[2025-10-13 03:49:49] 2025-10-13 07:48:42,897 | INFO     | sum of square deviations: 4504619664.99588
[2025-10-13 03:49:49] 2025-10-13 07:48:42,898 | INFO     | sum of deviations: -26225476041.237682
[2025-10-13 03:49:49] 2025-10-13 07:48:42,898 | INFO     | mean x: 1760334264.9959016
[2025-10-13 03:49:49] 2025-10-13 07:48:42,899 | INFO     | mean y: 2628728.7622950817
[2025-10-13 03:49:49] 2025-10-13 07:48:42,899 | INFO     | -- intersect: 10251130827.609741
[2025-10-13 03:49:49] 2025-10-13 07:48:42,899 | INFO     | intersect: 10251130827.609741
[2025-10-13 03:49:49] 2025-10-13 07:48:42,899 | INFO     | chi2: 0.09474763226047413
[2025-10-13 03:49:49] 2025-10-13 07:48:42,899 | INFO     | current chi2=0.09474763226047413 (change=21.71679822049203 %)
[2025-10-13 03:49:49] 2025-10-13 07:48:42,899 | INFO     | left removable region: 20
[2025-10-13 03:49:49] 2025-10-13 07:48:42,900 | INFO     | sum of square deviations: 3675384548.6447268
[2025-10-13 03:49:49] 2025-10-13 07:48:42,901 | INFO     | sum of deviations: -16692973568.131577
[2025-10-13 03:49:49] 2025-10-13 07:48:42,901 | INFO     | mean x: 1760334387.0394738
[2025-10-13 03:49:49] 2025-10-13 07:48:42,901 | INFO     | mean y: 2623253.903508772
[2025-10-13 03:49:49] 2025-10-13 07:48:42,901 | INFO     | -- intersect: 7997763627.652601
[2025-10-13 03:49:49] 2025-10-13 07:48:42,901 | INFO     | intersect: 7997763627.652601
[2025-10-13 03:49:49] 2025-10-13 07:48:42,901 | INFO     | chi2: 0.08108750555546836
[2025-10-13 03:49:49] 2025-10-13 07:48:42,901 | INFO     | -- intersect: 7997763627.652601
[2025-10-13 03:49:49] 2025-10-13 07:48:42,902 | INFO     | current memory leak: -4.54 B/s (using 228 data points, chi2=0.08)
[2025-10-13 03:49:49] 2025-10-13 07:48:42,902 | INFO     | could have reported an average CPU frequency of 2532 MHz (12 samples)
[2025-10-13 03:49:49] 2025-10-13 07:48:42,902 | INFO     | ..............................
[2025-10-13 03:49:49] 2025-10-13 07:48:42,902 | INFO     | . Timing measurements:
[2025-10-13 03:49:49] 2025-10-13 07:48:42,902 | INFO     | . get job = 0 s
[2025-10-13 03:49:49] 2025-10-13 07:48:42,902 | INFO     | . initial setup = 2 s
[2025-10-13 03:49:49] 2025-10-13 07:48:42,902 | INFO     | . payload setup = 12 s
[2025-10-13 03:49:49] 2025-10-13 07:48:42,902 | INFO     | . stage-in = 0 s
[2025-10-13 03:49:49] 2025-10-13 07:48:42,903 | INFO     | . payload execution = 15479 s
[2025-10-13 03:49:49] 2025-10-13 07:48:42,903 | INFO     | . stage-out = 2 s
[2025-10-13 03:49:49] 2025-10-13 07:48:42,903 | INFO     | . log creation = 0 s
[2025-10-13 03:49:49] 2025-10-13 07:48:42,903 | INFO     | ..............................
[2025-10-13 03:49:49] 2025-10-13 07:48:43,236 | INFO     | 
[2025-10-13 03:49:49] 2025-10-13 07:48:43,236 | INFO     | job summary report
[2025-10-13 03:49:49] 2025-10-13 07:48:43,236 | INFO     | --------------------------------------------------
[2025-10-13 03:49:49] 2025-10-13 07:48:43,236 | INFO     | PanDA job id: 6840428671
[2025-10-13 03:49:49] 2025-10-13 07:48:43,236 | INFO     | task id: 46676269
[2025-10-13 03:49:49] 2025-10-13 07:48:43,236 | INFO     | errors: (none)
[2025-10-13 03:49:49] 2025-10-13 07:48:43,236 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | pilot state: finished 
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | transexitcode: 0
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | exeerrorcode: 0
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | exeerrordiag: 
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | exitcode: 0
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | exitmsg: OK
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | cpuconsumptiontime: 43976 s
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | nevents: 400
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | neventsw: 0
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | pid: 2437641
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | pgrp: 2437641
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | corecount: 10
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | event service: False
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | sizes: {0: 2348028, 1: 2348884, 2: 2348884, 9: 2349174, 13: 2349202, 15496: 2380512, 15499: 2389510, 15501: 2389566, 15509: 2389760}
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | --------------------------------------------------
[2025-10-13 03:49:49] 2025-10-13 07:48:43,237 | INFO     | 
[2025-10-13 03:49:49] 2025-10-13 07:48:43,238 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 03:49:49] 2025-10-13 07:48:43,257 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,258 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,258 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,258 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,258 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,258 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,258 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,258 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,258 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,258 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,258 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,258 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,259 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,259 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,259 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,259 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,259 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,259 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:49:49] 2025-10-13 07:48:43,259 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,259 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:49:49] 2025-10-13 07:48:43,259 | INFO     | job 6840428671 has completed (purged errors)
[2025-10-13 03:49:49] 2025-10-13 07:48:43,259 | INFO     | overall cleanup function is called
[2025-10-13 03:49:49] 2025-10-13 07:48:44,268 | INFO     | --- collectZombieJob: --- 10, [2437641]
[2025-10-13 03:49:49] 2025-10-13 07:48:44,268 | INFO     | zombie collector waiting for pid 2437641
[2025-10-13 03:49:49] 2025-10-13 07:48:44,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:49:49] 2025-10-13 07:48:44,268 | INFO     | collected zombie processes
[2025-10-13 03:49:49] 2025-10-13 07:48:44,269 | INFO     | will attempt to kill all subprocesses of pid=2437641
[2025-10-13 03:49:49] 2025-10-13 07:48:44,556 | INFO     | process IDs to be killed: [2437641] (in reverse order)
[2025-10-13 03:49:49] 2025-10-13 07:48:44,660 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:49:49] 2025-10-13 07:48:44,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:49:49] 2025-10-13 07:48:44,672 | INFO     | did not find any defunct processes belonging to 2437641
[2025-10-13 03:49:49] 2025-10-13 07:48:44,682 | INFO     | did not find any defunct processes belonging to 2437641
[2025-10-13 03:49:49] 2025-10-13 07:48:44,682 | INFO     | ready for new job
[2025-10-13 03:49:49] 2025-10-13 07:48:44,682 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:49:49] 2025-10-13 07:48:44,685 | INFO     | ***************************************
[2025-10-13 03:49:49] 2025-10-13 07:48:44,685 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:49:49] 2025-10-13 07:48:44,685 | INFO     | ***************************************
[2025-10-13 03:49:49] 2025-10-13 07:48:44,685 | INFO     | 
[2025-10-13 03:49:49] 2025-10-13 07:48:44,689 | INFO     | architecture information:
[2025-10-13 03:49:49] 2025-10-13 07:48:44,690 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:49:49] 2025-10-13 07:48:44,733 | INFO     | cat /etc/os-release:
[2025-10-13 03:49:49] NAME="CentOS Linux"
[2025-10-13 03:49:49] VERSION="7 (Core)"
[2025-10-13 03:49:49] ID="centos"
[2025-10-13 03:49:49] ID_LIKE="rhel fedora"
[2025-10-13 03:49:49] VERSION_ID="7"
[2025-10-13 03:49:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:49:49] ANSI_COLOR="0;31"
[2025-10-13 03:49:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:49:49] HOME_URL="https://www.centos.org/"
[2025-10-13 03:49:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:49:49] 
[2025-10-13 03:49:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:49:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:49:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:49:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:49:49] 
[2025-10-13 03:49:49] 2025-10-13 07:48:44,733 | INFO     | ***************************************
[2025-10-13 03:49:49] 2025-10-13 07:48:45,236 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 03:49:49] 2025-10-13 07:48:45,254 | INFO     | sufficient remaining disk space (73368862720 B)
[2025-10-13 03:49:49] 2025-10-13 07:48:45,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:49:49] 2025-10-13 07:48:45,255 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:49:49] 2025-10-13 07:48:45,255 | INFO     | update_server=False
[2025-10-13 03:49:49] 2025-10-13 07:48:45,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:49:49] 2025-10-13 07:48:45,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:49:49] 2025-10-13 07:48:45,349 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 03:49:49] 2025-10-13 07:48:45,350 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 03:49:49] 2025-10-13 07:48:45,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:49:49] 2025-10-13 07:48:45,350 | INFO     | will abort loop
[2025-10-13 03:49:49] 2025-10-13 07:48:45,368 | INFO     | all payload control threads have been joined
[2025-10-13 03:49:49] 2025-10-13 07:48:45,369 | INFO     | all data control threads have been joined
[2025-10-13 03:49:49] 2025-10-13 07:48:45,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:49:49] 2025-10-13 07:48:45,941 | INFO     | all job control threads have been joined
[2025-10-13 03:49:49] 2025-10-13 07:48:46,261 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:46,336 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:46,355 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:46,373 | INFO     | [payload] control thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:46,375 | INFO     | [data] control thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:46,947 | INFO     | [job] control thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:46,976 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:47,067 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:47,267 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:47,408 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:47,446 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:47,539 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:47,580 | INFO     | [job] validate thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:47,855 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:48,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:49:49] 2025-10-13 07:48:49,040 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:48:49,344 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:49:49] 2025-10-13 07:49:14,956 | INFO     | PID=2423534 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:49:49] 2025-10-13 07:49:14,956 | INFO     | .. there are 11 such processes running
[2025-10-13 03:49:49] 2025-10-13 07:49:14,957 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:49:49] 2025-10-13 07:49:14,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:49:49] 2025-10-13 07:49:14,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:49:49] 2025-10-13 07:49:20,389 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:49:49] 2025-10-13 07:49:22,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140584039909184)>', '<ExcThread(monitor, started 140582802421504)>']
[2025-10-13 03:49:49] 2025-10-13 07:49:23,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:49:49] 2025-10-13 07:49:23,002 | INFO     | [monitor] control thread has ended
[2025-10-13 03:49:49] 2025-10-13 07:49:27,358 | INFO     | all workflow threads have been joined
[2025-10-13 03:49:49] 2025-10-13 07:49:27,358 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:49:49] 2025-10-13 07:49:27,358 | INFO     | traces error code: 0
[2025-10-13 03:49:49] 2025-10-13 07:49:27,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:49:49] 2025-10-13 07:49:27,651 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:49:49] 2025-10-13 07:49:27,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:49:49] 2025-10-13 07:49:27,701 [wrapper] pilotpid: 2423534
[2025-10-13 03:49:49] 2025-10-13 07:49:27,703 [wrapper] Pilot exit status: 0
[2025-10-13 03:49:49] 2025-10-13 07:49:28,168 [wrapper] pandaids: 6840428671 6840428671
[2025-10-13 03:49:49] 2025-10-13 07:49:28,230 [wrapper] cleanup supervisor_pilot 2844842 2423535
[2025-10-13 03:49:49] 2025-10-13 07:49:28,237 [wrapper] Test setup, not cleaning
[2025-10-13 03:49:49] 2025-10-13 07:49:28,241 [wrapper] apfmon messages muted
[2025-10-13 03:49:49] 2025-10-13 07:49:28,269 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:49:49] 2025-10-13 07:49:28,272 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:49:49]  *** Error codes and diagnostics ***
[2025-10-13 03:49:49]     "exeErrorCode": 0,
[2025-10-13 03:49:49]     "exeErrorDiag": "",
[2025-10-13 03:49:49]     "pilotErrorCode": 0,
[2025-10-13 03:49:49]     "pilotErrorDiag": "",
[2025-10-13 03:49:49]  *** Listing of results directory ***
[2025-10-13 03:49:49] total 624396
[2025-10-13 03:49:49] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-13 03:49:49] -rwx------. 1 boincer umatlas     36292 Oct 12 13:02 runpilot2-wrapper.sh
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:02 queuedata.json
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:49:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:49 run_atlas
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:49 job.xml
[2025-10-13 03:49:49] -rw-r--r--. 3 boincer umatlas 222112685 Oct 12 19:49 EVNT.46676267._004795.pool.root.1
[2025-10-13 03:49:49] -rw-r--r--. 3 boincer umatlas 222112685 Oct 12 19:49 ATLAS.root_0
[2025-10-13 03:49:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:49 start_atlas.sh
[2025-10-13 03:49:49] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:49 shared
[2025-10-13 03:49:49] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 19:49 input.tar.gz
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:49 boinc_lockfile
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 23:29 pandaJob.out
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas    974373 Oct 12 23:29 agis_schedconf.cvmfs.json
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas      6842 Oct 13 03:45 init_data.xml
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas       530 Oct 13 03:47 boinc_task_state.xml
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas 186279898 Oct 13 03:47 HITS.46676269._084273.pool.root.1
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas      1068 Oct 13 03:48 memory_monitor_summary.json
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:48 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas    514763 Oct 13 03:48 log.46676269._084273.job.log.tgz.1
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas      7848 Oct 13 03:48 heartbeat.json
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas        96 Oct 13 03:49 pilot_heartbeat.json
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas      5010 Oct 13 03:49 pilotlog.txt
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas   1972157 Oct 13 03:49 log.46676269._084273.job.log.1
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas       357 Oct 13 03:49 output.list
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:49 runtime_log
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas   2508800 Oct 13 03:49 result.tar.gz
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas      8801 Oct 13 03:49 runtime_log.err
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas       787 Oct 13 03:49 1qbKDmIeES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRlkNDmx5Vxsm.diag
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:49 boinc_mmap_file
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas        28 Oct 13 03:49 wrapper_checkpoint.txt
[2025-10-13 03:49:49] -rw-r--r--. 1 boincer umatlas     23377 Oct 13 03:49 stderr.txt
[2025-10-13 03:49:49] HITS file was successfully produced:
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas 186279898 Oct 13 03:47 shared/HITS.pool.root.1
[2025-10-13 03:49:49]  *** Contents of shared directory: ***
[2025-10-13 03:49:49] total 401856
[2025-10-13 03:49:49] -rw-r--r--. 3 boincer umatlas 222112685 Oct 12 19:49 ATLAS.root_0
[2025-10-13 03:49:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:49 start_atlas.sh
[2025-10-13 03:49:49] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 19:49 input.tar.gz
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas 186279898 Oct 13 03:47 HITS.pool.root.1
[2025-10-13 03:49:49] -rw-------. 1 boincer umatlas   2508800 Oct 13 03:49 result.tar.gz
03:49:51 (2416146): run_atlas exited; CPU time 44302.532747
03:49:51 (2416146): called boinc_finish(0)

</stderr_txt>
]]>

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