Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:59:47 (541802): wrapper (7.7.26015): starting
19:59:47 (541802): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:59:47] Arguments: --nthreads 8
[2025-10-12 19:59:47] Threads: 8
[2025-10-12 19:59:47] Checking for CVMFS
[2025-10-12 19:59:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:59:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:59:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:59:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:59:48] 2.13.2.0 2191370 129952 505484 151641 3 473 23184021 32935937 40122 16776704 0 435038652 99.666 383343385 17164 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 19:59:48] CVMFS is ok
[2025-10-12 19:59:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:59:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:59:48] Further information can be found at the LHC@home message board.
[2025-10-12 19:59:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:59:48] Checking for apptainer binary...
[2025-10-12 19:59:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:59:48] Running /usr/bin/apptainer --version
[2025-10-12 19:59:49] apptainer version 1.4.3-1.el9
[2025-10-12 19:59:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:59:49] c7-2-14.aglt2.org
[2025-10-12 19:59:49] apptainer works
[2025-10-12 19:59:49] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:59:49] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:59:49] Starting ATLAS job with PandaID=6840531176
[2025-10-12 19:59:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:34:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:34:46] 2025-10-13 02:33:44,090 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 22:34:46] 2025-10-13 02:33:44,109 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3260.664322916666
[2025-10-12 22:34:46] 2025-10-13 02:33:44,157 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840531176/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:34:46] 2025-10-13 02:33:44,157 | INFO     | extracted standard info from prmon json
[2025-10-12 22:34:46] 2025-10-13 02:33:44,157 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:34:46] 2025-10-13 02:33:44,157 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:34:46] 2025-10-13 02:33:44,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:34:46] 2025-10-13 02:33:44,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:34:46] 2025-10-13 02:33:44,160 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:34:46] 2025-10-13 02:33:44,160 | INFO     | sum of square deviations: 1046489255.3933299
[2025-10-12 22:34:46] 2025-10-13 02:33:44,161 | INFO     | sum of deviations: 19619589626.54
[2025-10-12 22:34:46] 2025-10-13 02:33:44,161 | INFO     | mean x: 1760318241.5266666
[2025-10-12 22:34:46] 2025-10-13 02:33:44,161 | INFO     | mean y: 2239067.74
[2025-10-12 22:34:46] 2025-10-13 02:33:44,161 | INFO     | -- intersect: -33000222575.198578
[2025-10-12 22:34:46] 2025-10-13 02:33:44,161 | INFO     | intersect: -33000222575.198578
[2025-10-12 22:34:46] 2025-10-13 02:33:44,161 | INFO     | chi2: 3.5298423616751706
[2025-10-12 22:34:46] 2025-10-13 02:33:44,162 | INFO     | sum of square deviations: 945288577.8896538
[2025-10-12 22:34:46] 2025-10-13 02:33:44,162 | INFO     | sum of deviations: 26936594047.006897
[2025-10-12 22:34:46] 2025-10-13 02:33:44,162 | INFO     | mean x: 1760318089.0275862
[2025-10-12 22:34:46] 2025-10-13 02:33:44,162 | INFO     | mean y: 2249748.248275862
[2025-10-12 22:34:46] 2025-10-13 02:33:44,162 | INFO     | -- intersect: -50159124108.18496
[2025-10-12 22:34:46] 2025-10-13 02:33:44,163 | INFO     | intersect: -50159124108.18496
[2025-10-12 22:34:46] 2025-10-13 02:33:44,163 | INFO     | chi2: 2.8997314166620853
[2025-10-12 22:34:46] 2025-10-13 02:33:44,163 | INFO     | current chi2=2.8997314166620853 (change=17.850965580062084 %)
[2025-10-12 22:34:46] 2025-10-13 02:33:44,163 | INFO     | right removable region: 144
[2025-10-12 22:34:46] 2025-10-13 02:33:44,163 | INFO     | sum of square deviations: 945286137.8896538
[2025-10-12 22:34:46] 2025-10-13 02:33:44,164 | INFO     | sum of deviations: -13904351418.199997
[2025-10-12 22:34:46] 2025-10-13 02:33:44,164 | INFO     | mean x: 1760318394.0275862
[2025-10-12 22:34:46] 2025-10-13 02:33:44,164 | INFO     | mean y: 2289232.8
[2025-10-12 22:34:46] 2025-10-13 02:33:44,164 | INFO     | -- intersect: 25895068759.985004
[2025-10-12 22:34:46] 2025-10-13 02:33:44,164 | INFO     | intersect: 25895068759.985004
[2025-10-12 22:34:46] 2025-10-13 02:33:44,164 | INFO     | chi2: 0.8856509251529365
[2025-10-12 22:34:46] 2025-10-13 02:33:44,165 | INFO     | current chi2=0.8856509251529365 (change=74.90961820933471 %)
[2025-10-12 22:34:46] 2025-10-13 02:33:44,165 | INFO     | sum of square deviations: 850835932.9357156
[2025-10-12 22:34:46] 2025-10-13 02:33:44,165 | INFO     | sum of deviations: -14674460948.28572
[2025-10-12 22:34:46] 2025-10-13 02:33:44,165 | INFO     | mean x: 1760318546.5214286
[2025-10-12 22:34:46] 2025-10-13 02:33:44,165 | INFO     | mean y: 2290301.4285714286
[2025-10-12 22:34:46] 2025-10-13 02:33:44,166 | INFO     | -- intersect: 30362697951.75225
[2025-10-12 22:34:46] 2025-10-13 02:33:44,166 | INFO     | intersect: 30362697951.75225
[2025-10-12 22:34:46] 2025-10-13 02:33:44,166 | INFO     | chi2: 0.8169710531970225
[2025-10-12 22:34:46] 2025-10-13 02:33:44,166 | INFO     | current chi2=0.8169710531970225 (change=7.754733835348758 %)
[2025-10-12 22:34:46] 2025-10-13 02:33:44,166 | INFO     | left removable region: 20
[2025-10-12 22:34:46] 2025-10-13 02:33:44,166 | INFO     | sum of square deviations: 591183820.9274185
[2025-10-12 22:34:46] 2025-10-13 02:33:44,167 | INFO     | sum of deviations: 2394087749.4758077
[2025-10-12 22:34:46] 2025-10-13 02:33:44,167 | INFO     | mean x: 1760318668.5241935
[2025-10-12 22:34:46] 2025-10-13 02:33:44,167 | INFO     | mean y: 2286474.0080645164
[2025-10-12 22:34:46] 2025-10-13 02:33:44,167 | INFO     | -- intersect: -7126388584.920429
[2025-10-12 22:34:46] 2025-10-13 02:33:44,167 | INFO     | intersect: -7126388584.920429
[2025-10-12 22:34:46] 2025-10-13 02:33:44,167 | INFO     | chi2: 0.020316674289861274
[2025-10-12 22:34:46] 2025-10-13 02:33:44,167 | INFO     | -- intersect: -7126388584.920429
[2025-10-12 22:34:46] 2025-10-13 02:33:44,167 | INFO     | current memory leak: 4.05 B/s (using 124 data points, chi2=0.02)
[2025-10-12 22:34:46] 2025-10-13 02:33:44,167 | INFO     | could have reported an average CPU frequency of 3202 MHz (9 samples)
[2025-10-12 22:34:46] 2025-10-13 02:33:44,168 | INFO     | ..............................
[2025-10-12 22:34:46] 2025-10-13 02:33:44,168 | INFO     | . Timing measurements:
[2025-10-12 22:34:46] 2025-10-13 02:33:44,168 | INFO     | . get job = 0 s
[2025-10-12 22:34:46] 2025-10-13 02:33:44,168 | INFO     | . initial setup = 4 s
[2025-10-12 22:34:46] 2025-10-13 02:33:44,168 | INFO     | . payload setup = 19 s
[2025-10-12 22:34:46] 2025-10-13 02:33:44,168 | INFO     | . stage-in = 0 s
[2025-10-12 22:34:46] 2025-10-13 02:33:44,168 | INFO     | . payload execution = 9123 s
[2025-10-12 22:34:46] 2025-10-13 02:33:44,168 | INFO     | . stage-out = 1 s
[2025-10-12 22:34:46] 2025-10-13 02:33:44,168 | INFO     | . log creation = 0 s
[2025-10-12 22:34:46] 2025-10-13 02:33:44,168 | INFO     | ..............................
[2025-10-12 22:34:46] 2025-10-13 02:33:44,230 | INFO     | 
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | job summary report
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | --------------------------------------------------
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | PanDA job id: 6840531176
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | task id: 46676269
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | errors: (none)
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | pilot state: finished 
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | transexitcode: 0
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | exeerrorcode: 0
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | exeerrordiag: 
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | exitcode: 0
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | exitmsg: OK
[2025-10-12 22:34:46] 2025-10-13 02:33:44,231 | INFO     | cpuconsumptiontime: 32082 s
[2025-10-12 22:34:46] 2025-10-13 02:33:44,232 | INFO     | nevents: 400
[2025-10-12 22:34:46] 2025-10-13 02:33:44,232 | INFO     | neventsw: 0
[2025-10-12 22:34:46] 2025-10-13 02:33:44,232 | INFO     | pid: 561737
[2025-10-12 22:34:46] 2025-10-13 02:33:44,232 | INFO     | pgrp: 561737
[2025-10-12 22:34:46] 2025-10-13 02:33:44,232 | INFO     | corecount: 8
[2025-10-12 22:34:46] 2025-10-13 02:33:44,232 | INFO     | event service: False
[2025-10-12 22:34:46] 2025-10-13 02:33:44,232 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2348885, 13: 2348913, 18: 2349231, 23: 2349259, 9147: 2377349, 9149: 2386403, 9163: 2386605}
[2025-10-12 22:34:46] 2025-10-13 02:33:44,232 | INFO     | --------------------------------------------------
[2025-10-12 22:34:46] 2025-10-13 02:33:44,232 | INFO     | 
[2025-10-12 22:34:46] 2025-10-13 02:33:44,232 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 22:34:46] 2025-10-13 02:33:44,319 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,319 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:34:46] 2025-10-13 02:33:44,320 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,321 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:34:46] 2025-10-13 02:33:44,321 | INFO     | job 6840531176 has completed (purged errors)
[2025-10-12 22:34:46] 2025-10-13 02:33:44,321 | INFO     | overall cleanup function is called
[2025-10-12 22:34:46] 2025-10-13 02:33:45,335 | INFO     | --- collectZombieJob: --- 10, [561737]
[2025-10-12 22:34:46] 2025-10-13 02:33:45,336 | INFO     | zombie collector waiting for pid 561737
[2025-10-12 22:34:46] 2025-10-13 02:33:45,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:34:46] 2025-10-13 02:33:45,336 | INFO     | collected zombie processes
[2025-10-12 22:34:46] 2025-10-13 02:33:45,336 | INFO     | will attempt to kill all subprocesses of pid=561737
[2025-10-12 22:34:46] 2025-10-13 02:33:46,054 | INFO     | process IDs to be killed: [561737] (in reverse order)
[2025-10-12 22:34:46] 2025-10-13 02:33:46,257 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:34:46] 2025-10-13 02:33:46,257 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:34:46] 2025-10-13 02:33:46,281 | INFO     | did not find any defunct processes belonging to 561737
[2025-10-12 22:34:46] 2025-10-13 02:33:46,303 | INFO     | did not find any defunct processes belonging to 561737
[2025-10-12 22:34:46] 2025-10-13 02:33:46,303 | INFO     | ready for new job
[2025-10-12 22:34:46] 2025-10-13 02:33:46,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:34:46] 2025-10-13 02:33:46,305 | INFO     | ***************************************
[2025-10-12 22:34:46] 2025-10-13 02:33:46,305 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:34:46] 2025-10-13 02:33:46,305 | INFO     | ***************************************
[2025-10-12 22:34:46] 2025-10-13 02:33:46,305 | INFO     | 
[2025-10-12 22:34:46] 2025-10-13 02:33:46,309 | INFO     | architecture information:
[2025-10-12 22:34:46] 2025-10-13 02:33:46,310 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:34:46] 2025-10-13 02:33:46,331 | INFO     | cat /etc/os-release:
[2025-10-12 22:34:46] NAME="CentOS Linux"
[2025-10-12 22:34:46] VERSION="7 (Core)"
[2025-10-12 22:34:46] ID="centos"
[2025-10-12 22:34:46] ID_LIKE="rhel fedora"
[2025-10-12 22:34:46] VERSION_ID="7"
[2025-10-12 22:34:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:34:46] ANSI_COLOR="0;31"
[2025-10-12 22:34:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:34:46] HOME_URL="https://www.centos.org/"
[2025-10-12 22:34:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:34:46] 
[2025-10-12 22:34:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:34:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:34:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:34:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:34:46] 
[2025-10-12 22:34:46] 2025-10-13 02:33:46,331 | INFO     | ***************************************
[2025-10-12 22:34:46] 2025-10-13 02:33:46,835 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 22:34:46] 2025-10-13 02:33:46,862 | INFO     | sufficient remaining disk space (74240229376 B)
[2025-10-12 22:34:46] 2025-10-13 02:33:46,862 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:34:46] 2025-10-13 02:33:46,862 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:34:46] 2025-10-13 02:33:46,862 | INFO     | update_server=False
[2025-10-12 22:34:46] 2025-10-13 02:33:46,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:34:46] 2025-10-13 02:33:47,153 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:34:46] 2025-10-13 02:33:47,154 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:34:46] 2025-10-13 02:33:47,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:34:46] 2025-10-13 02:33:47,154 | INFO     | will abort loop
[2025-10-12 22:34:46] 2025-10-13 02:33:47,778 | INFO     | all data control threads have been joined
[2025-10-12 22:34:46] 2025-10-13 02:33:47,799 | INFO     | all job control threads have been joined
[2025-10-12 22:34:46] 2025-10-13 02:33:47,874 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:47,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:34:46] 2025-10-13 02:33:48,099 | INFO     | all payload control threads have been joined
[2025-10-12 22:34:46] 2025-10-13 02:33:48,160 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:48,367 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:48,568 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:48,570 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:48,617 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:48,661 | INFO     | [job] validate thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:48,698 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:48,745 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:48,784 | INFO     | [data] control thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:48,804 | INFO     | [job] control thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:49,104 | INFO     | [payload] control thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:49,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:34:46] 2025-10-13 02:33:49,511 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:34:46] 2025-10-13 02:33:49,981 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:50,249 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:53,529 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:33:57,350 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:34:46] 2025-10-13 02:33:58,355 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:34:46] 2025-10-13 02:34:16,734 | INFO     | PID=553944 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 22:34:46] 2025-10-13 02:34:16,734 | INFO     | .. there are 58 such processes running
[2025-10-12 22:34:46] 2025-10-13 02:34:16,735 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:34:46] 2025-10-13 02:34:16,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:34:46] 2025-10-13 02:34:16,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:34:46] 2025-10-13 02:34:40,163 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:34:46] 2025-10-13 02:34:40,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139968483075904)>', '<ExcThread(monitor, started 139968135550720)>']
[2025-10-12 22:34:46] 2025-10-13 02:34:40,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:34:46] 2025-10-13 02:34:40,878 | INFO     | [monitor] control thread has ended
[2025-10-12 22:34:46] 2025-10-13 02:34:45,848 | INFO     | all workflow threads have been joined
[2025-10-12 22:34:46] 2025-10-13 02:34:45,848 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:34:46] 2025-10-13 02:34:45,848 | INFO     | traces error code: 0
[2025-10-12 22:34:46] 2025-10-13 02:34:45,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:34:46] 2025-10-13 02:34:45,989 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:34:46] 2025-10-13 02:34:46,000 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:34:46] 2025-10-13 02:34:46,003 [wrapper] pilotpid: 553944
[2025-10-12 22:34:46] 2025-10-13 02:34:46,007 [wrapper] Pilot exit status: 0
[2025-10-12 22:34:46] 2025-10-13 02:34:46,033 [wrapper] pandaids: 6840531176
[2025-10-12 22:34:46] 2025-10-13 02:34:46,168 [wrapper] cleanup supervisor_pilot 1513587 553945
[2025-10-12 22:34:46] 2025-10-13 02:34:46,180 [wrapper] Test setup, not cleaning
[2025-10-12 22:34:46] 2025-10-13 02:34:46,191 [wrapper] apfmon messages muted
[2025-10-12 22:34:46] 2025-10-13 02:34:46,195 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:34:46] 2025-10-13 02:34:46,199 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:34:46]  *** Error codes and diagnostics ***
[2025-10-12 22:34:46]     "exeErrorCode": 0,
[2025-10-12 22:34:46]     "exeErrorDiag": "",
[2025-10-12 22:34:46]     "pilotErrorCode": 0,
[2025-10-12 22:34:46]     "pilotErrorDiag": "",
[2025-10-12 22:34:46]  *** Listing of results directory ***
[2025-10-12 22:34:46] total 418164
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:04 queuedata.json
[2025-10-12 22:34:46] -rwx------. 1 boincer umatlas     36292 Oct 12 14:04 runpilot2-wrapper.sh
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:34:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:59 run_atlas
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:59 job.xml
[2025-10-12 22:34:46] -rw-r--r--. 2 boincer umatlas 221068235 Oct 12 19:59 EVNT.46676267._004384.pool.root.1
[2025-10-12 22:34:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:59 start_atlas.sh
[2025-10-12 22:34:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:59 shared
[2025-10-12 22:34:46] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 19:59 input.tar.gz
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:59 boinc_lockfile
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 19:59 pandaJob.out
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas    975603 Oct 12 20:00 agis_schedconf.cvmfs.json
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:00 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:34:46] drwx------. 5 boincer umatlas      4096 Oct 12 20:00 pilot3
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas      6935 Oct 12 22:28 init_data.xml
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas 200110742 Oct 12 22:32 HITS.46676269._085618.pool.root.1
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas       529 Oct 12 22:32 boinc_task_state.xml
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas      1056 Oct 12 22:33 memory_monitor_summary.json
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas    400168 Oct 12 22:33 log.46676269._085618.job.log.tgz.1
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas      7791 Oct 12 22:33 heartbeat.json
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas        95 Oct 12 22:34 pilot_heartbeat.json
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:34 boinc_mmap_file
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas        27 Oct 12 22:34 wrapper_checkpoint.txt
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas      5081 Oct 12 22:34 pilotlog.txt
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas   1159590 Oct 12 22:34 log.46676269._085618.job.log.1
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas       357 Oct 12 22:34 output.list
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:34 runtime_log
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas   1576960 Oct 12 22:34 result.tar.gz
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 22:34 runtime_log.err
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas       655 Oct 12 22:34 cvrLDmGcFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmedUMDmUXgPBo.diag
[2025-10-12 22:34:46] -rw-r--r--. 1 boincer umatlas     21136 Oct 12 22:34 stderr.txt
[2025-10-12 22:34:46] HITS file was successfully produced:
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas 200110742 Oct 12 22:32 shared/HITS.pool.root.1
[2025-10-12 22:34:46]  *** Contents of shared directory: ***
[2025-10-12 22:34:46] total 413432
[2025-10-12 22:34:46] -rw-r--r--. 2 boincer umatlas 221068235 Oct 12 19:59 ATLAS.root_0
[2025-10-12 22:34:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:59 start_atlas.sh
[2025-10-12 22:34:46] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 19:59 input.tar.gz
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas 200110742 Oct 12 22:32 HITS.pool.root.1
[2025-10-12 22:34:46] -rw-------. 1 boincer umatlas   1576960 Oct 12 22:34 result.tar.gz
22:34:47 (541802): run_atlas exited; CPU time 32450.780767
22:34:47 (541802): called boinc_finish(0)

</stderr_txt>
]]>

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