Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:37:18 (3637400): wrapper (7.7.26015): starting
19:37:18 (3637400): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:37:18] Arguments: --nthreads 8
[2025-10-12 19:37:18] Threads: 8
[2025-10-12 19:37:18] Checking for CVMFS
[2025-10-12 19:37:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:37:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:37:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:37:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:37:20] 2.13.2.0 2437980 129913 267152 151641 3 160 26426997 32935936 18220 16776704 0 184724689 99.619 200604383 29382 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 19:37:20] CVMFS is ok
[2025-10-12 19:37:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:37:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:37:20] Further information can be found at the LHC@home message board.
[2025-10-12 19:37:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:37:20] Checking for apptainer binary...
[2025-10-12 19:37:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:37:20] Running /usr/bin/apptainer --version
[2025-10-12 19:37:20] apptainer version 1.4.3-1.el9
[2025-10-12 19:37:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:37:21] c6-2-29-1.aglt2.org
[2025-10-12 19:37:21] apptainer works
[2025-10-12 19:37:41] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:37:41] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:37:41] Starting ATLAS job with PandaID=6840749337
[2025-10-12 19:37:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:38:34]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:38:34] 2025-10-13 05:37:39,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:38:34] 2025-10-13 05:37:39,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:38:34] 2025-10-13 05:37:39,318 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:38:34] 2025-10-13 05:37:39,318 | INFO     | sum of square deviations: 13295611563.417131
[2025-10-13 01:38:34] 2025-10-13 05:37:39,325 | INFO     | sum of deviations: -117264128867.19995
[2025-10-13 01:38:34] 2025-10-13 05:37:39,326 | INFO     | mean x: 1760323103.862857
[2025-10-13 01:38:34] 2025-10-13 05:37:39,326 | INFO     | mean y: 2148611.1
[2025-10-13 01:38:34] 2025-10-13 05:37:39,326 | INFO     | -- intersect: 15527779328.776468
[2025-10-13 01:38:34] 2025-10-13 05:37:39,326 | INFO     | intersect: 15527779328.776468
[2025-10-13 01:38:34] 2025-10-13 05:37:39,326 | INFO     | chi2: 4.4428255174196245
[2025-10-13 01:38:34] 2025-10-13 05:37:39,327 | INFO     | sum of square deviations: 12733953299.98268
[2025-10-13 01:38:34] 2025-10-13 05:37:39,334 | INFO     | sum of deviations: -58623660310.643456
[2025-10-13 01:38:34] 2025-10-13 05:37:39,334 | INFO     | mean x: 1760322951.3652174
[2025-10-13 01:38:34] 2025-10-13 05:37:39,335 | INFO     | mean y: 2164452.179710145
[2025-10-13 01:38:34] 2025-10-13 05:37:39,335 | INFO     | -- intersect: 8106212920.615998
[2025-10-13 01:38:34] 2025-10-13 05:37:39,335 | INFO     | intersect: 8106212920.615998
[2025-10-13 01:38:34] 2025-10-13 05:37:39,335 | INFO     | chi2: 2.4710243220523376
[2025-10-13 01:38:34] 2025-10-13 05:37:39,335 | INFO     | current chi2=2.4710243220523376 (change=44.3816933083724 %)
[2025-10-13 01:38:34] 2025-10-13 05:37:39,336 | INFO     | sum of square deviations: 12188089155.444098
[2025-10-13 01:38:34] 2025-10-13 05:37:39,341 | INFO     | sum of deviations: -49879528538.817635
[2025-10-13 01:38:34] 2025-10-13 05:37:39,341 | INFO     | mean x: 1760322798.8323529
[2025-10-13 01:38:34] 2025-10-13 05:37:39,341 | INFO     | mean y: 2166884.5470588235
[2025-10-13 01:38:34] 2025-10-13 05:37:39,341 | INFO     | -- intersect: 7206255250.004242
[2025-10-13 01:38:34] 2025-10-13 05:37:39,341 | INFO     | intersect: 7206255250.004242
[2025-10-13 01:38:34] 2025-10-13 05:37:39,341 | INFO     | chi2: 2.4467791088212336
[2025-10-13 01:38:34] 2025-10-13 05:37:39,342 | INFO     | current chi2=2.4467791088212336 (change=0.9811806793939939 %)
[2025-10-13 01:38:34] 2025-10-13 05:37:39,342 | INFO     | right removable region: 339
[2025-10-13 01:38:34] 2025-10-13 05:37:39,342 | INFO     | sum of square deviations: 12733897180.249304
[2025-10-13 01:38:34] 2025-10-13 05:37:39,349 | INFO     | sum of deviations: -170711811904.80292
[2025-10-13 01:38:34] 2025-10-13 05:37:39,349 | INFO     | mean x: 1760323256.368116
[2025-10-13 01:38:34] 2025-10-13 05:37:39,349 | INFO     | mean y: 2163057.8724637683
[2025-10-13 01:38:34] 2025-10-13 05:37:39,349 | INFO     | -- intersect: 23601220626.74162
[2025-10-13 01:38:34] 2025-10-13 05:37:39,349 | INFO     | intersect: 23601220626.74162
[2025-10-13 01:38:34] 2025-10-13 05:37:39,349 | INFO     | chi2: 2.836932894169193
[2025-10-13 01:38:34] 2025-10-13 05:37:39,350 | INFO     | current chi2=2.836932894169193 (change=36.14575042287791 %)
[2025-10-13 01:38:34] 2025-10-13 05:37:39,350 | INFO     | sum of square deviations: 12188229609.561834
[2025-10-13 01:38:34] 2025-10-13 05:37:39,363 | INFO     | sum of deviations: -167640005983.40015
[2025-10-13 01:38:34] 2025-10-13 05:37:39,364 | INFO     | mean x: 1760323408.8735294
[2025-10-13 01:38:34] 2025-10-13 05:37:39,364 | INFO     | mean y: 2162182.2
[2025-10-13 01:38:34] 2025-10-13 05:37:39,364 | INFO     | -- intersect: 24214097487.780994
[2025-10-13 01:38:34] 2025-10-13 05:37:39,364 | INFO     | intersect: 24214097487.780994
[2025-10-13 01:38:34] 2025-10-13 05:37:39,365 | INFO     | chi2: 2.806570885046636
[2025-10-13 01:38:34] 2025-10-13 05:37:39,365 | INFO     | current chi2=2.806570885046636 (change=1.0702406526767123 %)
[2025-10-13 01:38:34] 2025-10-13 05:37:39,365 | INFO     | left removable region: 20
[2025-10-13 01:38:34] 2025-10-13 05:37:39,370 | INFO     | sum of square deviations: 10066319442.677103
[2025-10-13 01:38:34] 2025-10-13 05:37:39,373 | INFO     | sum of deviations: -66100068773.83708
[2025-10-13 01:38:34] 2025-10-13 05:37:39,373 | INFO     | mean x: 1760323378.351097
[2025-10-13 01:38:34] 2025-10-13 05:37:39,373 | INFO     | mean y: 2170998.6771159875
[2025-10-13 01:38:34] 2025-10-13 05:37:39,373 | INFO     | -- intersect: 11561261392.718485
[2025-10-13 01:38:34] 2025-10-13 05:37:39,378 | INFO     | intersect: 11561261392.718485
[2025-10-13 01:38:34] 2025-10-13 05:37:39,378 | INFO     | chi2: 0.6440754045354949
[2025-10-13 01:38:34] 2025-10-13 05:37:39,379 | INFO     | -- intersect: 11561261392.718485
[2025-10-13 01:38:34] 2025-10-13 05:37:39,379 | INFO     | current memory leak: -6.57 B/s (using 319 data points, chi2=0.64)
[2025-10-13 01:38:34] 2025-10-13 05:37:39,379 | INFO     | could have reported an average CPU frequency of 2662 MHz (15 samples)
[2025-10-13 01:38:34] 2025-10-13 05:37:39,380 | INFO     | ..............................
[2025-10-13 01:38:34] 2025-10-13 05:37:39,380 | INFO     | . Timing measurements:
[2025-10-13 01:38:34] 2025-10-13 05:37:39,380 | INFO     | . get job = 0 s
[2025-10-13 01:38:34] 2025-10-13 05:37:39,380 | INFO     | . initial setup = 5 s
[2025-10-13 01:38:34] 2025-10-13 05:37:39,380 | INFO     | . payload setup = 39 s
[2025-10-13 01:38:34] 2025-10-13 05:37:39,380 | INFO     | . stage-in = 0 s
[2025-10-13 01:38:34] 2025-10-13 05:37:39,380 | INFO     | . payload execution = 21368 s
[2025-10-13 01:38:34] 2025-10-13 05:37:39,380 | INFO     | . stage-out = 8 s
[2025-10-13 01:38:34] 2025-10-13 05:37:39,380 | INFO     | . log creation = 0 s
[2025-10-13 01:38:34] 2025-10-13 05:37:39,381 | INFO     | ..............................
[2025-10-13 01:38:34] 2025-10-13 05:37:39,599 | INFO     | time since job start (21533s) is within the limit (172800.0s)
[2025-10-13 01:38:34] 2025-10-13 05:37:39,746 | INFO     | 
[2025-10-13 01:38:34] 2025-10-13 05:37:39,748 | INFO     | job summary report
[2025-10-13 01:38:34] 2025-10-13 05:37:39,748 | INFO     | --------------------------------------------------
[2025-10-13 01:38:34] 2025-10-13 05:37:39,748 | INFO     | PanDA job id: 6840749337
[2025-10-13 01:38:34] 2025-10-13 05:37:39,748 | INFO     | task id: 46676269
[2025-10-13 01:38:34] 2025-10-13 05:37:39,748 | INFO     | errors: (none)
[2025-10-13 01:38:34] 2025-10-13 05:37:39,748 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:38:34] 2025-10-13 05:37:39,748 | INFO     | pilot state: finished 
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | transexitcode: 0
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | exeerrorcode: 0
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | exeerrordiag: 
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | exitcode: 0
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | exitmsg: OK
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | cpuconsumptiontime: 43579 s
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | nevents: 400
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | neventsw: 0
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | pid: 3655525
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | pgrp: 3655525
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | corecount: 8
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | event service: False
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 31: 2349231, 34: 2349387, 21412: 2383282, 21423: 2392280, 21425: 2392336, 21469: 2392530}
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | --------------------------------------------------
[2025-10-13 01:38:34] 2025-10-13 05:37:39,749 | INFO     | 
[2025-10-13 01:38:34] 2025-10-13 05:37:39,750 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 01:38:34] 2025-10-13 05:37:39,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,950 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,951 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,952 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:38:34] 2025-10-13 05:37:39,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,953 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:38:34] 2025-10-13 05:37:39,953 | INFO     | job 6840749337 has completed (purged errors)
[2025-10-13 01:38:34] 2025-10-13 05:37:39,953 | INFO     | overall cleanup function is called
[2025-10-13 01:38:34] 2025-10-13 05:37:40,967 | INFO     | --- collectZombieJob: --- 10, [3655525]
[2025-10-13 01:38:34] 2025-10-13 05:37:40,968 | INFO     | zombie collector waiting for pid 3655525
[2025-10-13 01:38:34] 2025-10-13 05:37:40,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:38:34] 2025-10-13 05:37:40,968 | INFO     | collected zombie processes
[2025-10-13 01:38:34] 2025-10-13 05:37:40,968 | INFO     | will attempt to kill all subprocesses of pid=3655525
[2025-10-13 01:38:34] 2025-10-13 05:37:42,225 | INFO     | process IDs to be killed: [3655525] (in reverse order)
[2025-10-13 01:38:34] 2025-10-13 05:37:42,406 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:38:34] 2025-10-13 05:37:42,407 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:38:34] 2025-10-13 05:37:42,530 | INFO     | did not find any defunct processes belonging to 3655525
[2025-10-13 01:38:34] 2025-10-13 05:37:42,668 | INFO     | did not find any defunct processes belonging to 3655525
[2025-10-13 01:38:34] 2025-10-13 05:37:42,669 | INFO     | ready for new job
[2025-10-13 01:38:34] 2025-10-13 05:37:42,669 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:38:34] 2025-10-13 05:37:42,673 | INFO     | ***************************************
[2025-10-13 01:38:34] 2025-10-13 05:37:42,673 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:38:34] 2025-10-13 05:37:42,673 | INFO     | ***************************************
[2025-10-13 01:38:34] 2025-10-13 05:37:42,673 | INFO     | 
[2025-10-13 01:38:34] 2025-10-13 05:37:42,677 | INFO     | architecture information:
[2025-10-13 01:38:34] 2025-10-13 05:37:42,678 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:38:34] 2025-10-13 05:37:42,705 | INFO     | cat /etc/os-release:
[2025-10-13 01:38:34] NAME="CentOS Linux"
[2025-10-13 01:38:34] VERSION="7 (Core)"
[2025-10-13 01:38:34] ID="centos"
[2025-10-13 01:38:34] ID_LIKE="rhel fedora"
[2025-10-13 01:38:34] VERSION_ID="7"
[2025-10-13 01:38:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:38:34] ANSI_COLOR="0;31"
[2025-10-13 01:38:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:38:34] HOME_URL="https://www.centos.org/"
[2025-10-13 01:38:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:38:34] 
[2025-10-13 01:38:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:38:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:38:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:38:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:38:34] 
[2025-10-13 01:38:34] 2025-10-13 05:37:42,705 | INFO     | ***************************************
[2025-10-13 01:38:34] 2025-10-13 05:37:43,252 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 01:38:34] 2025-10-13 05:37:43,587 | INFO     | sufficient remaining disk space (74262249472 B)
[2025-10-13 01:38:34] 2025-10-13 05:37:43,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:38:34] 2025-10-13 05:37:43,588 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:38:34] 2025-10-13 05:37:43,588 | INFO     | update_server=False
[2025-10-13 01:38:34] 2025-10-13 05:37:43,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:38:34] 2025-10-13 05:37:43,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:38:34] 2025-10-13 05:37:44,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:38:34] 2025-10-13 05:37:44,128 | INFO     | aborting loop
[2025-10-13 01:38:34] 2025-10-13 05:37:44,334 | INFO     | all data control threads have been joined
[2025-10-13 01:38:34] 2025-10-13 05:37:44,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:38:34] 2025-10-13 05:37:44,602 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:44,746 | INFO     | all job control threads have been joined
[2025-10-13 01:38:34] 2025-10-13 05:37:44,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:38:34] 2025-10-13 05:37:44,916 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:45,020 | INFO     | all payload control threads have been joined
[2025-10-13 01:38:34] 2025-10-13 05:37:45,134 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:45,341 | INFO     | [data] control thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:45,619 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:45,772 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:45,785 | INFO     | [job] control thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:45,795 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:45,814 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:45,842 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:45,951 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:45,964 | INFO     | [job] validate thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:45,996 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:46,027 | INFO     | [payload] control thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:46,542 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:37:47,600 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:38:34] 2025-10-13 05:38:15,528 | INFO     | PID=3642793 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:38:34] 2025-10-13 05:38:15,528 | INFO     | .. there are 25 such processes running
[2025-10-13 01:38:34] 2025-10-13 05:38:15,529 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:38:34] 2025-10-13 05:38:15,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:38:34] 2025-10-13 05:38:15,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:38:34] 2025-10-13 05:38:25,018 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:38:34] 2025-10-13 05:38:27,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140602850719552)>', '<ExcThread(monitor, started 140601920055040)>']
[2025-10-13 01:38:34] 2025-10-13 05:38:27,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:38:34] 2025-10-13 05:38:27,730 | INFO     | [monitor] control thread has ended
[2025-10-13 01:38:34] 2025-10-13 05:38:32,132 | INFO     | all workflow threads have been joined
[2025-10-13 01:38:34] 2025-10-13 05:38:32,133 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:38:34] 2025-10-13 05:38:32,133 | INFO     | traces error code: 0
[2025-10-13 01:38:34] 2025-10-13 05:38:32,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:38:34] 2025-10-13 05:38:32,454 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:38:34] 2025-10-13 05:38:32,468 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:38:34] 2025-10-13 05:38:32,477 [wrapper] pilotpid: 3642793
[2025-10-13 01:38:34] 2025-10-13 05:38:32,481 [wrapper] Pilot exit status: 0
[2025-10-13 01:38:34] 2025-10-13 05:38:32,573 [wrapper] pandaids: 6840749337
[2025-10-13 01:38:34] 2025-10-13 05:38:32,865 [wrapper] cleanup supervisor_pilot  602197 3642794
[2025-10-13 01:38:34] 2025-10-13 05:38:32,882 [wrapper] Test setup, not cleaning
[2025-10-13 01:38:34] 2025-10-13 05:38:32,887 [wrapper] apfmon messages muted
[2025-10-13 01:38:34] 2025-10-13 05:38:32,890 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:38:34] 2025-10-13 05:38:32,894 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:38:34]  *** Error codes and diagnostics ***
[2025-10-13 01:38:34]     "exeErrorCode": 0,
[2025-10-13 01:38:34]     "exeErrorDiag": "",
[2025-10-13 01:38:34]     "pilotErrorCode": 0,
[2025-10-13 01:38:34]     "pilotErrorDiag": "",
[2025-10-13 01:38:34]  *** Listing of results directory ***
[2025-10-13 01:38:34] total 412432
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-13 01:38:34] -rwx------. 1 boincer umatlas     36292 Oct 12 16:35 runpilot2-wrapper.sh
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:35 queuedata.json
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:38:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:37 run_atlas
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:37 job.xml
[2025-10-13 01:38:34] -rw-r--r--. 2 boincer umatlas 222997437 Oct 12 19:37 EVNT.46676267._004853.pool.root.1
[2025-10-13 01:38:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:37 start_atlas.sh
[2025-10-13 01:38:34] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:37 shared
[2025-10-13 01:38:34] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 19:37 input.tar.gz
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:37 boinc_lockfile
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 19:37 pandaJob.out
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas    975603 Oct 12 19:38 agis_schedconf.cvmfs.json
[2025-10-13 01:38:34] drwx------. 5 boincer umatlas      4096 Oct 12 19:38 pilot3
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas      6842 Oct 13 01:27 init_data.xml
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas 188840929 Oct 13 01:33 HITS.46676269._088858.pool.root.1
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas       531 Oct 13 01:33 boinc_task_state.xml
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas      1041 Oct 13 01:36 memory_monitor_summary.json
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas   1560580 Oct 13 01:36 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas    564932 Oct 13 01:36 log.46676269._088858.job.log.tgz.1
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas      7827 Oct 13 01:37 heartbeat.json
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas        95 Oct 13 01:38 pilot_heartbeat.json
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas      4824 Oct 13 01:38 pilotlog.txt
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 01:38 boinc_mmap_file
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas   2739773 Oct 13 01:38 log.46676269._088858.job.log.1
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas       357 Oct 13 01:38 output.list
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas       620 Oct 13 01:38 runtime_log
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas   3328000 Oct 13 01:38 result.tar.gz
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas        28 Oct 13 01:38 wrapper_checkpoint.txt
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 01:38 runtime_log.err
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas       657 Oct 13 01:38 JdAODmkxHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGyUMDmrlnuqm.diag
[2025-10-13 01:38:34] -rw-r--r--. 1 boincer umatlas      2148 Oct 13 01:38 stderr.txt
[2025-10-13 01:38:34] HITS file was successfully produced:
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas 188840929 Oct 13 01:33 shared/HITS.pool.root.1
[2025-10-13 01:38:34]  *** Contents of shared directory: ***
[2025-10-13 01:38:34] total 406020
[2025-10-13 01:38:34] -rw-r--r--. 2 boincer umatlas 222997437 Oct 12 19:37 ATLAS.root_0
[2025-10-13 01:38:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:37 start_atlas.sh
[2025-10-13 01:38:34] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 19:37 input.tar.gz
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas 188840929 Oct 13 01:33 HITS.pool.root.1
[2025-10-13 01:38:34] -rw-------. 1 boincer umatlas   3328000 Oct 13 01:38 result.tar.gz
01:38:35 (3637400): run_atlas exited; CPU time 44316.350443
01:38:35 (3637400): called boinc_finish(0)

</stderr_txt>
]]>

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