Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:01:42 (23014): wrapper (7.7.26015): starting
18:01:42 (23014): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:01:42] Arguments: --nthreads 8
[2025-10-12 18:01:42] Threads: 8
[2025-10-12 18:01:42] Checking for CVMFS
[2025-10-12 18:01:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:01:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:01:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:01:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:01:43] 2.11.2.0 16446 53438 131308 151638 2 57 13563414 18432001 1833 130560 0 48084715 99.975 2275506 37880 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:01:43] CVMFS is ok
[2025-10-12 18:01:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:01:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:01:43] Further information can be found at the LHC@home message board.
[2025-10-12 18:01:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:01:43] Checking for apptainer binary...
[2025-10-12 18:01:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:01:43] Running /usr/bin/apptainer --version
[2025-10-12 18:01:43] apptainer version 1.3.2-1.el7
[2025-10-12 18:01:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:01:43] c-206-26.aglt2.org
[2025-10-12 18:01:43] apptainer works
[2025-10-12 18:01:44] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:01:44] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:01:44] Starting ATLAS job with PandaID=6840428581
[2025-10-12 18:01:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:01:19]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:01:19] 2025-10-13 01:00:34,597 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:01:19] 2025-10-13 01:00:34,597 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:01:19] 2025-10-13 01:00:34,602 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:01:19] 2025-10-13 01:00:34,603 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,604 | INFO     | sum of deviations: 19667689936.5
[2025-10-12 21:01:19] 2025-10-13 01:00:34,605 | INFO     | mean x: 1760311880.5
[2025-10-12 21:01:19] 2025-10-13 01:00:34,605 | INFO     | mean y: 2442001.3238636362
[2025-10-12 21:01:19] 2025-10-13 01:00:34,605 | INFO     | -- intersect: -20478058524.016186
[2025-10-12 21:01:19] 2025-10-13 01:00:34,605 | INFO     | intersect: -20478058524.016186
[2025-10-12 21:01:19] 2025-10-13 01:00:34,606 | INFO     | chi2: 2.1145995515974354
[2025-10-12 21:01:19] 2025-10-13 01:00:34,606 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,607 | INFO     | sum of deviations: 30354787304.000008
[2025-10-12 21:01:19] 2025-10-13 01:00:34,608 | INFO     | mean x: 1760311728.0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,608 | INFO     | mean y: 2453351.9590643276
[2025-10-12 21:01:19] 2025-10-13 01:00:34,608 | INFO     | -- intersect: -34461482552.0399
[2025-10-12 21:01:19] 2025-10-13 01:00:34,608 | INFO     | intersect: -34461482552.0399
[2025-10-12 21:01:19] 2025-10-13 01:00:34,609 | INFO     | chi2: 1.3435860908338726
[2025-10-12 21:01:19] 2025-10-13 01:00:34,609 | INFO     | current chi2=1.3435860908338726 (change=36.46144066289595 %)
[2025-10-12 21:01:19] 2025-10-13 01:00:34,609 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 21:01:19] 2025-10-13 01:00:34,610 | INFO     | sum of deviations: 29315589748.500004
[2025-10-12 21:01:19] 2025-10-13 01:00:34,611 | INFO     | mean x: 1760311575.5
[2025-10-12 21:01:19] 2025-10-13 01:00:34,611 | INFO     | mean y: 2452151.6445783135
[2025-10-12 21:01:19] 2025-10-13 01:00:34,611 | INFO     | -- intersect: -36380777931.45932
[2025-10-12 21:01:19] 2025-10-13 01:00:34,611 | INFO     | intersect: -36380777931.45932
[2025-10-12 21:01:19] 2025-10-13 01:00:34,612 | INFO     | chi2: 1.3440045579797346
[2025-10-12 21:01:19] 2025-10-13 01:00:34,612 | INFO     | current chi2=1.3440045579797346 (change=-0.031145540186584435 %)
[2025-10-12 21:01:19] 2025-10-13 01:00:34,612 | INFO     | right removable region: 165
[2025-10-12 21:01:19] 2025-10-13 01:00:34,612 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,614 | INFO     | sum of deviations: -6312985770.000001
[2025-10-12 21:01:19] 2025-10-13 01:00:34,614 | INFO     | mean x: 1760312033.0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,614 | INFO     | mean y: 2469978.9590643276
[2025-10-12 21:01:19] 2025-10-13 01:00:34,614 | INFO     | -- intersect: 7170050250.843913
[2025-10-12 21:01:19] 2025-10-13 01:00:34,615 | INFO     | intersect: 7170050250.843913
[2025-10-12 21:01:19] 2025-10-13 01:00:34,615 | INFO     | chi2: 0.8059882122701467
[2025-10-12 21:01:19] 2025-10-13 01:00:34,615 | INFO     | current chi2=0.8059882122701467 (change=61.884593626189044 %)
[2025-10-12 21:01:19] 2025-10-13 01:00:34,616 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 21:01:19] 2025-10-13 01:00:34,617 | INFO     | sum of deviations: -7356203957.500001
[2025-10-12 21:01:19] 2025-10-13 01:00:34,617 | INFO     | mean x: 1760312185.5
[2025-10-12 21:01:19] 2025-10-13 01:00:34,617 | INFO     | mean y: 2471133.93373494
[2025-10-12 21:01:19] 2025-10-13 01:00:34,617 | INFO     | -- intersect: 9132171616.376919
[2025-10-12 21:01:19] 2025-10-13 01:00:34,618 | INFO     | intersect: 9132171616.376919
[2025-10-12 21:01:19] 2025-10-13 01:00:34,618 | INFO     | chi2: 0.7921154781345816
[2025-10-12 21:01:19] 2025-10-13 01:00:34,618 | INFO     | current chi2=0.7921154781345816 (change=1.7212080678563728 %)
[2025-10-12 21:01:19] 2025-10-13 01:00:34,618 | INFO     | left removable region: 20
[2025-10-12 21:01:19] 2025-10-13 01:00:34,619 | INFO     | sum of square deviations: 945282840.0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,620 | INFO     | sum of deviations: 2701876416.000001
[2025-10-12 21:01:19] 2025-10-13 01:00:34,620 | INFO     | mean x: 1760312155.0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,620 | INFO     | mean y: 2484527.972413793
[2025-10-12 21:01:19] 2025-10-13 01:00:34,620 | INFO     | -- intersect: -5028968170.76973
[2025-10-12 21:01:19] 2025-10-13 01:00:34,621 | INFO     | intersect: -5028968170.76973
[2025-10-12 21:01:19] 2025-10-13 01:00:34,621 | INFO     | chi2: 0.00020800644283575003
[2025-10-12 21:01:19] 2025-10-13 01:00:34,621 | INFO     | -- intersect: -5028968170.76973
[2025-10-12 21:01:19] 2025-10-13 01:00:34,621 | INFO     | current memory leak: 2.86 B/s (using 145 data points, chi2=0.00)
[2025-10-12 21:01:19] 2025-10-13 01:00:34,622 | INFO     | could have reported an average CPU frequency of 2527 MHz (9 samples)
[2025-10-12 21:01:19] 2025-10-13 01:00:34,622 | INFO     | ..............................
[2025-10-12 21:01:19] 2025-10-13 01:00:34,622 | INFO     | . Timing measurements:
[2025-10-12 21:01:19] 2025-10-13 01:00:34,622 | INFO     | . get job = 0 s
[2025-10-12 21:01:19] 2025-10-13 01:00:34,623 | INFO     | . initial setup = 2 s
[2025-10-12 21:01:19] 2025-10-13 01:00:34,623 | INFO     | . payload setup = 4 s
[2025-10-12 21:01:19] 2025-10-13 01:00:34,623 | INFO     | . stage-in = 0 s
[2025-10-12 21:01:19] 2025-10-13 01:00:34,623 | INFO     | . payload execution = 10682 s
[2025-10-12 21:01:19] 2025-10-13 01:00:34,623 | INFO     | . stage-out = 0 s
[2025-10-12 21:01:19] 2025-10-13 01:00:34,623 | INFO     | . log creation = 0 s
[2025-10-12 21:01:19] 2025-10-13 01:00:34,624 | INFO     | ..............................
[2025-10-12 21:01:19] 2025-10-13 01:00:34,709 | INFO     | 
[2025-10-12 21:01:19] 2025-10-13 01:00:34,709 | INFO     | job summary report
[2025-10-12 21:01:19] 2025-10-13 01:00:34,709 | INFO     | --------------------------------------------------
[2025-10-12 21:01:19] 2025-10-13 01:00:34,709 | INFO     | PanDA job id: 6840428581
[2025-10-12 21:01:19] 2025-10-13 01:00:34,710 | INFO     | task id: 46676269
[2025-10-12 21:01:19] 2025-10-13 01:00:34,710 | INFO     | errors: (none)
[2025-10-12 21:01:19] 2025-10-13 01:00:34,710 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:01:19] 2025-10-13 01:00:34,710 | INFO     | pilot state: finished 
[2025-10-12 21:01:19] 2025-10-13 01:00:34,710 | INFO     | transexitcode: 0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,710 | INFO     | exeerrorcode: 0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,710 | INFO     | exeerrordiag: 
[2025-10-12 21:01:19] 2025-10-13 01:00:34,710 | INFO     | exitcode: 0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,710 | INFO     | exitmsg: OK
[2025-10-12 21:01:19] 2025-10-13 01:00:34,710 | INFO     | cpuconsumptiontime: 81060 s
[2025-10-12 21:01:19] 2025-10-13 01:00:34,711 | INFO     | nevents: 400
[2025-10-12 21:01:19] 2025-10-13 01:00:34,711 | INFO     | neventsw: 0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,711 | INFO     | pid: 1858
[2025-10-12 21:01:19] 2025-10-13 01:00:34,711 | INFO     | pgrp: 1858
[2025-10-12 21:01:19] 2025-10-13 01:00:34,711 | INFO     | corecount: 8
[2025-10-12 21:01:19] 2025-10-13 01:00:34,711 | INFO     | event service: False
[2025-10-12 21:01:19] 2025-10-13 01:00:34,711 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 10691: 2378048, 10693: 2387046, 10696: 2387102, 10703: 2387488}
[2025-10-12 21:01:19] 2025-10-13 01:00:34,711 | INFO     | --------------------------------------------------
[2025-10-12 21:01:19] 2025-10-13 01:00:34,711 | INFO     | 
[2025-10-12 21:01:19] 2025-10-13 01:00:34,711 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 21:01:19] 2025-10-13 01:00:34,730 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,731 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,731 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,731 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,731 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,731 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,732 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,732 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,732 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,732 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,732 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,732 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:01:19] 2025-10-13 01:00:34,732 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,732 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:01:19] 2025-10-13 01:00:34,732 | INFO     | job 6840428581 has completed (purged errors)
[2025-10-12 21:01:19] 2025-10-13 01:00:34,733 | INFO     | overall cleanup function is called
[2025-10-12 21:01:19] 2025-10-13 01:00:35,740 | INFO     | --- collectZombieJob: --- 10, [1858]
[2025-10-12 21:01:19] 2025-10-13 01:00:35,740 | INFO     | zombie collector waiting for pid 1858
[2025-10-12 21:01:19] 2025-10-13 01:00:35,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:01:19] 2025-10-13 01:00:35,740 | INFO     | collected zombie processes
[2025-10-12 21:01:19] 2025-10-13 01:00:35,740 | INFO     | will attempt to kill all subprocesses of pid=1858
[2025-10-12 21:01:19] 2025-10-13 01:00:35,874 | INFO     | process IDs to be killed: [1858] (in reverse order)
[2025-10-12 21:01:19] 2025-10-13 01:00:35,917 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:01:19] 2025-10-13 01:00:35,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:01:19] 2025-10-13 01:00:35,920 | INFO     | did not find any defunct processes belonging to 1858
[2025-10-12 21:01:19] 2025-10-13 01:00:35,922 | INFO     | did not find any defunct processes belonging to 1858
[2025-10-12 21:01:19] 2025-10-13 01:00:35,923 | INFO     | ready for new job
[2025-10-12 21:01:19] 2025-10-13 01:00:35,923 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:01:19] 2025-10-13 01:00:35,924 | INFO     | ***************************************
[2025-10-12 21:01:19] 2025-10-13 01:00:35,924 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:01:19] 2025-10-13 01:00:35,924 | INFO     | ***************************************
[2025-10-12 21:01:19] 2025-10-13 01:00:35,924 | INFO     | 
[2025-10-12 21:01:19] 2025-10-13 01:00:35,925 | INFO     | architecture information:
[2025-10-12 21:01:19] 2025-10-13 01:00:35,925 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:01:19] 2025-10-13 01:00:35,936 | INFO     | cat /etc/os-release:
[2025-10-12 21:01:19] NAME="CentOS Linux"
[2025-10-12 21:01:19] VERSION="7 (Core)"
[2025-10-12 21:01:19] ID="centos"
[2025-10-12 21:01:19] ID_LIKE="rhel fedora"
[2025-10-12 21:01:19] VERSION_ID="7"
[2025-10-12 21:01:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:01:19] ANSI_COLOR="0;31"
[2025-10-12 21:01:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:01:19] HOME_URL="https://www.centos.org/"
[2025-10-12 21:01:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:01:19] 
[2025-10-12 21:01:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:01:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:01:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:01:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:01:19] 
[2025-10-12 21:01:19] 2025-10-13 01:00:35,936 | INFO     | ***************************************
[2025-10-12 21:01:19] 2025-10-13 01:00:36,439 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 21:01:19] 2025-10-13 01:00:36,456 | INFO     | sufficient remaining disk space (27965521920 B)
[2025-10-12 21:01:19] 2025-10-13 01:00:36,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:01:19] 2025-10-13 01:00:36,457 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:01:19] 2025-10-13 01:00:36,457 | INFO     | update_server=False
[2025-10-12 21:01:19] 2025-10-13 01:00:36,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:01:19] 2025-10-13 01:00:36,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:01:19] 2025-10-13 01:00:36,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:01:19] 2025-10-13 01:00:36,458 | INFO     | aborting loop
[2025-10-12 21:01:19] 2025-10-13 01:00:36,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:01:19] 2025-10-13 01:00:36,692 | INFO     | all data control threads have been joined
[2025-10-12 21:01:19] 2025-10-13 01:00:36,713 | INFO     | all job control threads have been joined
[2025-10-12 21:01:19] 2025-10-13 01:00:36,808 | INFO     | all payload control threads have been joined
[2025-10-12 21:01:19] 2025-10-13 01:00:37,460 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:37,461 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:37,463 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:37,526 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:37,697 | INFO     | [data] control thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:37,719 | INFO     | [job] control thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:37,814 | INFO     | [payload] control thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:38,015 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:38,041 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:38,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:01:19] 2025-10-13 01:00:38,467 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:38,608 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:38,657 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:38,889 | INFO     | [job] validate thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:38,981 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:42,318 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:00:46,669 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:01:19] 2025-10-13 01:00:47,674 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:01:19] 2025-10-13 01:01:07,396 | INFO     | PID=26720 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 21:01:19] 2025-10-13 01:01:07,396 | INFO     | .. there are 3 such processes running
[2025-10-12 21:01:19] 2025-10-13 01:01:07,397 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:01:19] 2025-10-13 01:01:07,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:01:19] 2025-10-13 01:01:07,397 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:01:19] 2025-10-13 01:01:13,051 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:01:19] 2025-10-13 01:01:14,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088022255424)>', '<ExcThread(monitor, started 140087429932800)>']
[2025-10-12 21:01:19] 2025-10-13 01:01:15,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:01:19] 2025-10-13 01:01:15,439 | INFO     | [monitor] control thread has ended
[2025-10-12 21:01:19] 2025-10-13 01:01:19,679 | INFO     | all workflow threads have been joined
[2025-10-12 21:01:19] 2025-10-13 01:01:19,679 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:01:19] 2025-10-13 01:01:19,679 | INFO     | traces error code: 0
[2025-10-12 21:01:19] 2025-10-13 01:01:19,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:01:19] 2025-10-13 01:01:19,806 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:01:19] 2025-10-13 01:01:19,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:01:19] 2025-10-13 01:01:19,811 [wrapper] pilotpid: 26720
[2025-10-12 21:01:19] 2025-10-13 01:01:19,813 [wrapper] Pilot exit status: 0
[2025-10-12 21:01:19] 2025-10-13 01:01:19,823 [wrapper] pandaids: 6840428581
[2025-10-12 21:01:19] 2025-10-13 01:01:19,857 [wrapper] cleanup supervisor_pilot 17155 26721
[2025-10-12 21:01:19] 2025-10-13 01:01:19,860 [wrapper] Test setup, not cleaning
[2025-10-12 21:01:19] 2025-10-13 01:01:19,862 [wrapper] apfmon messages muted
[2025-10-12 21:01:19] 2025-10-13 01:01:19,865 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:01:19] 2025-10-13 01:01:19,867 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:01:19]  *** Error codes and diagnostics ***
[2025-10-12 21:01:19]     "exeErrorCode": 0,
[2025-10-12 21:01:19]     "exeErrorDiag": "",
[2025-10-12 21:01:19]     "pilotErrorCode": 0,
[2025-10-12 21:01:19]     "pilotErrorDiag": "",
[2025-10-12 21:01:19]  *** Listing of results directory ***
[2025-10-12 21:01:19] total 414048
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:57 queuedata.json
[2025-10-12 21:01:19] -rwx------ 1 boincer umatlas     36292 Oct 12 12:58 runpilot2-wrapper.sh
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas       100 Oct 12 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:01:19] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 18:01 run_atlas
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas       105 Oct 12 18:01 job.xml
[2025-10-12 21:01:19] -rw-r--r-- 2 boincer umatlas 222122452 Oct 12 18:01 EVNT.46676267._004792.pool.root.1
[2025-10-12 21:01:19] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 18:01 input.tar.gz
[2025-10-12 21:01:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:01 start_atlas.sh
[2025-10-12 21:01:19] drwxrwx--x 2 boincer umatlas      4096 Oct 12 18:01 shared
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas         0 Oct 12 18:01 boinc_lockfile
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 18:01 pandaJob.out
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas    975528 Oct 12 18:01 agis_schedconf.cvmfs.json
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas   1560580 Oct 12 18:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:01:19] drwx------ 5 boincer umatlas      4096 Oct 12 18:01 pilot3
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 20:54 init_data.xml
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas 194124452 Oct 12 20:59 HITS.46676269._084183.pool.root.1
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas       530 Oct 12 21:00 boinc_task_state.xml
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas      1056 Oct 12 21:00 memory_monitor_summary.json
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas    408078 Oct 12 21:00 log.46676269._084183.job.log.tgz.1
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas        95 Oct 12 21:00 pilot_heartbeat.json
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas      7852 Oct 12 21:00 heartbeat.json
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 21:01 boinc_mmap_file
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas        28 Oct 12 21:01 wrapper_checkpoint.txt
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas      4893 Oct 12 21:01 pilotlog.txt
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas   1506416 Oct 12 21:01 log.46676269._084183.job.log.1
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas       357 Oct 12 21:01 output.list
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas       620 Oct 12 21:01 runtime_log
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas   1935360 Oct 12 21:01 result.tar.gz
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 21:01 runtime_log.err
[2025-10-12 21:01:19] -rw------- 1 boincer umatlas       662 Oct 12 21:01 LoOODmCaES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCUUMDmAYmOfn.diag
[2025-10-12 21:01:19] -rw-r--r-- 1 boincer umatlas     20855 Oct 12 21:01 stderr.txt
[2025-10-12 21:01:20] HITS file was successfully produced:
[2025-10-12 21:01:20] -rw------- 1 boincer umatlas 194124452 Oct 12 20:59 shared/HITS.pool.root.1
[2025-10-12 21:01:20]  *** Contents of shared directory: ***
[2025-10-12 21:01:20] total 408972
[2025-10-12 21:01:20] -rw-r--r-- 2 boincer umatlas 222122452 Oct 12 18:01 ATLAS.root_0
[2025-10-12 21:01:20] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 18:01 input.tar.gz
[2025-10-12 21:01:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:01 start_atlas.sh
[2025-10-12 21:01:20] -rw------- 1 boincer umatlas 194124452 Oct 12 20:59 HITS.pool.root.1
[2025-10-12 21:01:20] -rw------- 1 boincer umatlas   1935360 Oct 12 21:01 result.tar.gz
21:01:21 (23014): run_atlas exited; CPU time 81212.050325
21:01:21 (23014): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN