Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:20:47 (8601): wrapper (7.7.26015): starting
08:20:47 (8601): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 08:20:47] Arguments: --nthreads 8
[2025-10-13 08:20:47] Threads: 8
[2025-10-13 08:20:47] Checking for CVMFS
[2025-10-13 08:20:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:20:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:20:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:20:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:20:50] 2.11.2.0 22894 17839 68112 151650 2 61 20756512 25165825 4632 130560 0 5013581 99.956 1645388 1279 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 08:20:50] CVMFS is ok
[2025-10-13 08:20:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:20:50] Checking for apptainer binary...
[2025-10-13 08:20:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:20:50] Running /usr/bin/apptainer --version
[2025-10-13 08:20:50] apptainer version 1.3.2-1.el7
[2025-10-13 08:20:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:20:56] cg-vwn425.simple-grid.lan
[2025-10-13 08:20:56] apptainer works
[2025-10-13 08:20:56] Set ATHENA_PROC_NUMBER=8
[2025-10-13 08:20:56] Set ATHENA_CORE_NUMBER=8
[2025-10-13 08:20:56] Starting ATLAS job with PandaID=6840536063
[2025-10-13 08:20:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:31:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:31:51] 2025-10-13 10:31:02,982 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:31:51] 2025-10-13 10:31:02,986 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:31:51] 2025-10-13 10:31:02,987 | INFO     | sum of square deviations: 3922276332.0
[2025-10-13 12:31:51] 2025-10-13 10:31:02,996 | INFO     | sum of deviations: 41104967791.00001
[2025-10-13 12:31:51] 2025-10-13 10:31:02,996 | INFO     | mean x: 1760344232.0
[2025-10-13 12:31:51] 2025-10-13 10:31:02,996 | INFO     | mean y: 2471632.9227467813
[2025-10-13 12:31:51] 2025-10-13 10:31:02,996 | INFO     | -- intersect: -18445716825.16487
[2025-10-13 12:31:51] 2025-10-13 10:31:02,996 | INFO     | intersect: -18445716825.16487
[2025-10-13 12:31:51] 2025-10-13 10:31:02,997 | INFO     | chi2: 5.91793149003397
[2025-10-13 12:31:51] 2025-10-13 10:31:02,997 | INFO     | sum of square deviations: 3675146117.0
[2025-10-13 12:31:51] 2025-10-13 10:31:02,999 | INFO     | sum of deviations: 55686994519.5
[2025-10-13 12:31:51] 2025-10-13 10:31:02,999 | INFO     | mean x: 1760344079.5
[2025-10-13 12:31:51] 2025-10-13 10:31:02,999 | INFO     | mean y: 2480465.7236842103
[2025-10-13 12:31:51] 2025-10-13 10:31:02,999 | INFO     | -- intersect: -26670818496.215458
[2025-10-13 12:31:51] 2025-10-13 10:31:02,999 | INFO     | intersect: -26670818496.215458
[2025-10-13 12:31:51] 2025-10-13 10:31:03,000 | INFO     | chi2: 5.201874801399773
[2025-10-13 12:31:51] 2025-10-13 10:31:03,000 | INFO     | current chi2=5.201874801399773 (change=12.099779962645133 %)
[2025-10-13 12:31:51] 2025-10-13 10:31:03,000 | INFO     | right removable region: 227
[2025-10-13 12:31:51] 2025-10-13 10:31:03,000 | INFO     | sum of square deviations: 3675146117.0
[2025-10-13 12:31:51] 2025-10-13 10:31:03,002 | INFO     | sum of deviations: -38639223381.5
[2025-10-13 12:31:51] 2025-10-13 10:31:03,002 | INFO     | mean x: 1760344384.5
[2025-10-13 12:31:51] 2025-10-13 10:31:03,003 | INFO     | mean y: 2520774.3903508773
[2025-10-13 12:31:51] 2025-10-13 10:31:03,003 | INFO     | -- intersect: 18510176724.839363
[2025-10-13 12:31:51] 2025-10-13 10:31:03,003 | INFO     | intersect: 18510176724.839363
[2025-10-13 12:31:51] 2025-10-13 10:31:03,003 | INFO     | chi2: 1.344930060672083
[2025-10-13 12:31:51] 2025-10-13 10:31:03,003 | INFO     | current chi2=1.344930060672083 (change=77.27364598699734 %)
[2025-10-13 12:31:51] 2025-10-13 10:31:03,004 | INFO     | sum of square deviations: 3438620752.0
[2025-10-13 12:31:51] 2025-10-13 10:31:03,005 | INFO     | sum of deviations: -56353647446.0
[2025-10-13 12:31:51] 2025-10-13 10:31:03,006 | INFO     | mean x: 1760344537.0
[2025-10-13 12:31:51] 2025-10-13 10:31:03,006 | INFO     | mean y: 2532087.269058296
[2025-10-13 12:31:51] 2025-10-13 10:31:03,006 | INFO     | -- intersect: 28851841905.425507
[2025-10-13 12:31:51] 2025-10-13 10:31:03,006 | INFO     | intersect: 28851841905.425507
[2025-10-13 12:31:51] 2025-10-13 10:31:03,006 | INFO     | chi2: 0.9462021029299499
[2025-10-13 12:31:51] 2025-10-13 10:31:03,006 | INFO     | current chi2=0.9462021029299499 (change=29.646742934936142 %)
[2025-10-13 12:31:51] 2025-10-13 10:31:03,007 | INFO     | sum of square deviations: 3212467674.5
[2025-10-13 12:31:51] 2025-10-13 10:31:03,009 | INFO     | sum of deviations: -50654484271.50001
[2025-10-13 12:31:51] 2025-10-13 10:31:03,009 | INFO     | mean x: 1760344689.5
[2025-10-13 12:31:51] 2025-10-13 10:31:03,009 | INFO     | mean y: 2528239.481651376
[2025-10-13 12:31:51] 2025-10-13 10:31:03,009 | INFO     | -- intersect: 27759804396.532772
[2025-10-13 12:31:51] 2025-10-13 10:31:03,009 | INFO     | intersect: 27759804396.532772
[2025-10-13 12:31:51] 2025-10-13 10:31:03,009 | INFO     | chi2: 0.9417799144063161
[2025-10-13 12:31:51] 2025-10-13 10:31:03,009 | INFO     | current chi2=0.9417799144063161 (change=0.46736194201431913 %)
[2025-10-13 12:31:51] 2025-10-13 10:31:03,010 | INFO     | left removable region: 30
[2025-10-13 12:31:51] 2025-10-13 10:31:03,010 | INFO     | sum of square deviations: 2370641658.0
[2025-10-13 12:31:51] 2025-10-13 10:31:03,011 | INFO     | sum of deviations: -15224088237.000002
[2025-10-13 12:31:51] 2025-10-13 10:31:03,012 | INFO     | mean x: 1760344964.0
[2025-10-13 12:31:51] 2025-10-13 10:31:03,012 | INFO     | mean y: 2523642.9441624368
[2025-10-13 12:31:51] 2025-10-13 10:31:03,012 | INFO     | -- intersect: 11307330916.98161
[2025-10-13 12:31:51] 2025-10-13 10:31:03,012 | INFO     | intersect: 11307330916.98161
[2025-10-13 12:31:51] 2025-10-13 10:31:03,012 | INFO     | chi2: 0.10339819450733176
[2025-10-13 12:31:51] 2025-10-13 10:31:03,012 | INFO     | -- intersect: 11307330916.98161
[2025-10-13 12:31:51] 2025-10-13 10:31:03,012 | INFO     | current memory leak: -6.42 B/s (using 197 data points, chi2=0.10)
[2025-10-13 12:31:51] 2025-10-13 10:31:03,013 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 12:31:51] 2025-10-13 10:31:03,013 | INFO     | ..............................
[2025-10-13 12:31:51] 2025-10-13 10:31:03,013 | INFO     | . Timing measurements:
[2025-10-13 12:31:51] 2025-10-13 10:31:03,014 | INFO     | . get job = 0 s
[2025-10-13 12:31:51] 2025-10-13 10:31:03,014 | INFO     | . initial setup = 8 s
[2025-10-13 12:31:51] 2025-10-13 10:31:03,014 | INFO     | . payload setup = 137 s
[2025-10-13 12:31:51] 2025-10-13 10:31:03,014 | INFO     | . stage-in = 0 s
[2025-10-13 12:31:51] 2025-10-13 10:31:03,014 | INFO     | . payload execution = 14353 s
[2025-10-13 12:31:51] 2025-10-13 10:31:03,014 | INFO     | . stage-out = 4 s
[2025-10-13 12:31:51] 2025-10-13 10:31:03,014 | INFO     | . log creation = 1 s
[2025-10-13 12:31:51] 2025-10-13 10:31:03,014 | INFO     | ..............................
[2025-10-13 12:31:51] 2025-10-13 10:31:03,413 | INFO     | 
[2025-10-13 12:31:51] 2025-10-13 10:31:03,413 | INFO     | job summary report
[2025-10-13 12:31:51] 2025-10-13 10:31:03,413 | INFO     | --------------------------------------------------
[2025-10-13 12:31:51] 2025-10-13 10:31:03,413 | INFO     | PanDA job id: 6840536063
[2025-10-13 12:31:51] 2025-10-13 10:31:03,413 | INFO     | task id: 46676269
[2025-10-13 12:31:51] 2025-10-13 10:31:03,413 | INFO     | errors: (none)
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | pilot state: finished 
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | transexitcode: 0
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | exeerrorcode: 0
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | exeerrordiag: 
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | exitcode: 0
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | exitmsg: OK
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | cpuconsumptiontime: 54520 s
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | nevents: 400
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | neventsw: 0
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | pid: 18999
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | pgrp: 18999
[2025-10-13 12:31:51] 2025-10-13 10:31:03,414 | INFO     | corecount: 8
[2025-10-13 12:31:51] 2025-10-13 10:31:03,415 | INFO     | event service: False
[2025-10-13 12:31:51] 2025-10-13 10:31:03,415 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 23: 2348914, 33: 2348942, 44: 2348998, 55: 2349154, 66: 2349182, 76: 2349210, 87: 2349266, 98: 2349294, 100: 2349864, 
[2025-10-13 12:31:51] 2025-10-13 10:31:03,415 | INFO     | --------------------------------------------------
[2025-10-13 12:31:51] 2025-10-13 10:31:03,415 | INFO     | 
[2025-10-13 12:31:51] 2025-10-13 10:31:03,415 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-10-13 12:31:51] 2025-10-13 10:31:03,689 | INFO     | time since job start (14804s) is within the limit (172800.0s)
[2025-10-13 12:31:51] 2025-10-13 10:31:03,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:31:51] 2025-10-13 10:31:03,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:31:51] 2025-10-13 10:31:03,725 | INFO     | job 6840536063 has completed (purged errors)
[2025-10-13 12:31:51] 2025-10-13 10:31:03,726 | INFO     | overall cleanup function is called
[2025-10-13 12:31:51] 2025-10-13 10:31:04,735 | INFO     | --- collectZombieJob: --- 10, [18999]
[2025-10-13 12:31:51] 2025-10-13 10:31:04,735 | INFO     | zombie collector waiting for pid 18999
[2025-10-13 12:31:51] 2025-10-13 10:31:04,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:31:51] 2025-10-13 10:31:04,735 | INFO     | collected zombie processes
[2025-10-13 12:31:51] 2025-10-13 10:31:04,735 | INFO     | will attempt to kill all subprocesses of pid=18999
[2025-10-13 12:31:51] 2025-10-13 10:31:04,853 | INFO     | process IDs to be killed: [18999] (in reverse order)
[2025-10-13 12:31:51] 2025-10-13 10:31:05,512 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:31:51] 2025-10-13 10:31:05,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:31:51] 2025-10-13 10:31:05,516 | INFO     | did not find any defunct processes belonging to 18999
[2025-10-13 12:31:51] 2025-10-13 10:31:05,519 | INFO     | did not find any defunct processes belonging to 18999
[2025-10-13 12:31:51] 2025-10-13 10:31:05,519 | INFO     | ready for new job
[2025-10-13 12:31:51] 2025-10-13 10:31:05,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:31:51] 2025-10-13 10:31:05,521 | INFO     | ***************************************
[2025-10-13 12:31:51] 2025-10-13 10:31:05,521 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:31:51] 2025-10-13 10:31:05,522 | INFO     | ***************************************
[2025-10-13 12:31:51] 2025-10-13 10:31:05,528 | INFO     | 
[2025-10-13 12:31:51] 2025-10-13 10:31:05,529 | INFO     | pilot is running in a VM
[2025-10-13 12:31:51] 2025-10-13 10:31:05,529 | INFO     | architecture information:
[2025-10-13 12:31:51] 2025-10-13 10:31:05,543 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:31:51] 2025-10-13 10:31:05,840 | INFO     | cat /etc/os-release:
[2025-10-13 12:31:51] NAME="CentOS Linux"
[2025-10-13 12:31:51] VERSION="7 (Core)"
[2025-10-13 12:31:51] ID="centos"
[2025-10-13 12:31:51] ID_LIKE="rhel fedora"
[2025-10-13 12:31:51] VERSION_ID="7"
[2025-10-13 12:31:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:31:51] ANSI_COLOR="0;31"
[2025-10-13 12:31:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:31:51] HOME_URL="https://www.centos.org/"
[2025-10-13 12:31:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:31:51] 
[2025-10-13 12:31:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:31:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:31:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:31:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:31:51] 
[2025-10-13 12:31:51] 2025-10-13 10:31:05,840 | INFO     | ***************************************
[2025-10-13 12:31:51] 2025-10-13 10:31:06,344 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-10-13 12:31:51] 2025-10-13 10:31:06,619 | INFO     | sufficient remaining disk space (495690186752 B)
[2025-10-13 12:31:51] 2025-10-13 10:31:06,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:31:51] 2025-10-13 10:31:06,620 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:31:51] 2025-10-13 10:31:06,620 | INFO     | update_server=False
[2025-10-13 12:31:51] 2025-10-13 10:31:06,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:31:51] 2025-10-13 10:31:06,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:31:51] 2025-10-13 10:31:06,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:31:51] 2025-10-13 10:31:06,863 | INFO     | all job control threads have been joined
[2025-10-13 12:31:51] 2025-10-13 10:31:07,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:31:51] 2025-10-13 10:31:07,042 | INFO     | aborting loop
[2025-10-13 12:31:51] 2025-10-13 10:31:07,135 | INFO     | all payload control threads have been joined
[2025-10-13 12:31:51] 2025-10-13 10:31:07,614 | INFO     | all data control threads have been joined
[2025-10-13 12:31:51] 2025-10-13 10:31:07,626 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:07,652 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:07,679 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:07,869 | INFO     | [job] control thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:07,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:08,047 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:08,138 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:08,141 | INFO     | [payload] control thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:08,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:31:51] 2025-10-13 10:31:08,588 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:08,620 | INFO     | [data] control thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:08,723 | INFO     | [job] validate thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:08,806 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:09,037 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:09,130 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:09,157 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:10,630 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:31:51] 2025-10-13 10:31:36,871 | INFO     | PID=12423 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 12:31:51] 2025-10-13 10:31:36,872 | INFO     | .. there are 9 such processes running
[2025-10-13 12:31:51] 2025-10-13 10:31:36,873 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:31:51] 2025-10-13 10:31:36,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:31:51] 2025-10-13 10:31:36,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:31:51] 2025-10-13 10:31:44,266 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:31:51] 2025-10-13 10:31:44,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328481380160)>', '<ExcThread(monitor, started 140327880992512)>']
[2025-10-13 12:31:51] 2025-10-13 10:31:44,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:31:51] 2025-10-13 10:31:44,923 | INFO     | [monitor] control thread has ended
[2025-10-13 12:31:51] 2025-10-13 10:31:49,352 | INFO     | all workflow threads have been joined
[2025-10-13 12:31:51] 2025-10-13 10:31:49,352 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:31:51] 2025-10-13 10:31:49,352 | INFO     | traces error code: 0
[2025-10-13 12:31:51] 2025-10-13 10:31:49,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:31:51] 2025-10-13 10:31:49,711 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:31:51] 2025-10-13 10:31:49,766 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:31:51] 2025-10-13 10:31:49,865 [wrapper] pilotpid: 12423
[2025-10-13 12:31:51] 2025-10-13 10:31:49,881 [wrapper] Pilot exit status: 0
[2025-10-13 12:31:51] 2025-10-13 10:31:49,903 [wrapper] pandaids: 6840536063
[2025-10-13 12:31:51] 2025-10-13 10:31:49,949 [wrapper] cleanup supervisor_pilot 12987 12424
[2025-10-13 12:31:51] 2025-10-13 10:31:49,953 [wrapper] Test setup, not cleaning
[2025-10-13 12:31:51] 2025-10-13 10:31:49,962 [wrapper] apfmon messages muted
[2025-10-13 12:31:51] 2025-10-13 10:31:49,977 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:31:51] 2025-10-13 10:31:49,993 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:31:51]  *** Error codes and diagnostics ***
[2025-10-13 12:31:51]     "exeErrorCode": 0,
[2025-10-13 12:31:51]     "exeErrorDiag": "",
[2025-10-13 12:31:51]     "pilotErrorCode": 0,
[2025-10-13 12:31:51]     "pilotErrorDiag": "",
[2025-10-13 12:31:51]  *** Listing of results directory ***
[2025-10-13 12:31:51] total 417392
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc    557409 Oct 12 20:20 pilot3.tar.gz
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc      5112 Oct 12 20:28 queuedata.json
[2025-10-13 12:31:51] -rwx------. 1 boinc boinc     36292 Oct 12 20:28 runpilot2-wrapper.sh
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc       100 Oct 13 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:31:51] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 08:20 run_atlas
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc       105 Oct 13 08:20 job.xml
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc      6391 Oct 13 08:20 init_data.xml
[2025-10-13 12:31:51] -rw-r--r--. 2 boinc boinc 221980244 Oct 13 08:20 EVNT.46676267._004404.pool.root.1
[2025-10-13 12:31:51] -rw-r--r--. 2 boinc boinc     15120 Oct 13 08:20 start_atlas.sh
[2025-10-13 12:31:51] drwxrwx--x. 2 boinc boinc        68 Oct 13 08:20 shared
[2025-10-13 12:31:51] -rw-r--r--. 2 boinc boinc    569683 Oct 13 08:20 input.tar.gz
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc         0 Oct 13 08:20 boinc_lockfile
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc      2550 Oct 13 08:20 pandaJob.out
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc    973230 Oct 13 08:24 agis_schedconf.cvmfs.json
[2025-10-13 12:31:51] drwx------. 5 boinc boinc      4096 Oct 13 08:24 pilot3
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc 196645141 Oct 13 12:27 HITS.46676269._086118.pool.root.1
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc       531 Oct 13 12:28 boinc_task_state.xml
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc      1013 Oct 13 12:29 memory_monitor_summary.json
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc   1560580 Oct 13 12:29 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc    471020 Oct 13 12:29 log.46676269._086118.job.log.tgz.1
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc      7778 Oct 13 12:31 heartbeat.json
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc        95 Oct 13 12:31 pilot_heartbeat.json
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc      8192 Oct 13 12:31 boinc_mmap_file
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc        28 Oct 13 12:31 wrapper_checkpoint.txt
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc      4885 Oct 13 12:31 pilotlog.txt
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc   1975713 Oct 13 12:31 log.46676269._086118.job.log.1
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc       357 Oct 13 12:31 output.list
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc       620 Oct 13 12:31 runtime_log
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc   2467840 Oct 13 12:31 result.tar.gz
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc      8717 Oct 13 12:31 runtime_log.err
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc       657 Oct 13 12:31 pTWLDmUzFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm93kNDm8fyyan.diag
[2025-10-13 12:31:51] -rw-r--r--. 1 boinc boinc     20626 Oct 13 12:31 stderr.txt
[2025-10-13 12:31:51] HITS file was successfully produced:
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc 196645141 Oct 13 12:27 shared/HITS.pool.root.1
[2025-10-13 12:31:51]  *** Contents of shared directory: ***
[2025-10-13 12:31:51] total 411808
[2025-10-13 12:31:51] -rw-r--r--. 2 boinc boinc 221980244 Oct 13 08:20 ATLAS.root_0
[2025-10-13 12:31:51] -rw-r--r--. 2 boinc boinc     15120 Oct 13 08:20 start_atlas.sh
[2025-10-13 12:31:51] -rw-r--r--. 2 boinc boinc    569683 Oct 13 08:20 input.tar.gz
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc 196645141 Oct 13 12:27 HITS.pool.root.1
[2025-10-13 12:31:51] -rw-------. 1 boinc boinc   2467840 Oct 13 12:31 result.tar.gz
12:31:53 (8601): run_atlas exited; CPU time 54727.855432
12:31:53 (8601): called boinc_finish(0)

</stderr_txt>
]]>

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