Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:01:40 (3485686): wrapper (7.7.26015): starting
18:01:40 (3485686): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:01:40] Arguments: --nthreads 8
[2025-10-12 18:01:40] Threads: 8
[2025-10-12 18:01:40] Checking for CVMFS
[2025-10-12 18:01:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:01:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:01:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:01:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:01:41] 2.13.2.0 1173468 124389 198052 151638 3 474 38324191 40960000 23675 16776704 0 255660935 99.764 156716934 36048 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:01:41] CVMFS is ok
[2025-10-12 18:01:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:01:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:01:41] Further information can be found at the LHC@home message board.
[2025-10-12 18:01:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:01:41] Checking for apptainer binary...
[2025-10-12 18:01:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:01:41] Running /usr/bin/apptainer --version
[2025-10-12 18:01:41] apptainer version 1.4.3-1.el9
[2025-10-12 18:01:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:01:41] c-212-20.aglt2.org
[2025-10-12 18:01:41] apptainer works
[2025-10-12 18:01:41] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:01:41] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:01:41] Starting ATLAS job with PandaID=6840748978
[2025-10-12 18:01:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:07:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:07:16] 2025-10-13 00:06:17,434 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:07:16] 2025-10-13 00:06:17,436 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:07:16] 2025-10-13 00:06:17,437 | INFO     | sum of square deviations: 563014200.0081968
[2025-10-12 20:07:16] 2025-10-13 00:06:17,437 | INFO     | sum of deviations: -10482583214.614754
[2025-10-12 20:07:16] 2025-10-13 00:06:17,437 | INFO     | mean x: 1760310241.090164
[2025-10-12 20:07:16] 2025-10-13 00:06:17,437 | INFO     | mean y: 2343955.2377049183
[2025-10-12 20:07:16] 2025-10-13 00:06:17,437 | INFO     | -- intersect: 32777003254.235054
[2025-10-12 20:07:16] 2025-10-13 00:06:17,437 | INFO     | intersect: 32777003254.235054
[2025-10-12 20:07:16] 2025-10-13 00:06:17,438 | INFO     | chi2: 5.8018468478221
[2025-10-12 20:07:16] 2025-10-13 00:06:17,438 | INFO     | sum of square deviations: 496607005.69230676
[2025-10-12 20:07:16] 2025-10-13 00:06:17,438 | INFO     | sum of deviations: 27056990356.384605
[2025-10-12 20:07:16] 2025-10-13 00:06:17,439 | INFO     | mean x: 1760310088.6153846
[2025-10-12 20:07:16] 2025-10-13 00:06:17,439 | INFO     | mean y: 2430228.7863247865
[2025-10-12 20:07:16] 2025-10-13 00:06:17,439 | INFO     | -- intersect: -95905788032.28127
[2025-10-12 20:07:16] 2025-10-13 00:06:17,439 | INFO     | intersect: -95905788032.28127
[2025-10-12 20:07:16] 2025-10-13 00:06:17,439 | INFO     | chi2: 1.704072880741078
[2025-10-12 20:07:16] 2025-10-13 00:06:17,439 | INFO     | current chi2=1.704072880741078 (change=70.62878553264889 %)
[2025-10-12 20:07:16] 2025-10-13 00:06:17,439 | INFO     | sum of square deviations: 435627866.25
[2025-10-12 20:07:16] 2025-10-13 00:06:17,440 | INFO     | sum of deviations: 25773475311.74999
[2025-10-12 20:07:16] 2025-10-13 00:06:17,440 | INFO     | mean x: 1760309936.125
[2025-10-12 20:07:16] 2025-10-13 00:06:17,440 | INFO     | mean y: 2427017.160714286
[2025-10-12 20:07:16] 2025-10-13 00:06:17,440 | INFO     | -- intersect: -104144502494.71114
[2025-10-12 20:07:16] 2025-10-13 00:06:17,440 | INFO     | intersect: -104144502494.71114
[2025-10-12 20:07:16] 2025-10-13 00:06:17,440 | INFO     | chi2: 1.7030145089790256
[2025-10-12 20:07:16] 2025-10-13 00:06:17,440 | INFO     | current chi2=1.7030145089790256 (change=0.062108362501033854 %)
[2025-10-12 20:07:16] 2025-10-13 00:06:17,440 | INFO     | right removable region: 111
[2025-10-12 20:07:16] 2025-10-13 00:06:17,441 | INFO     | sum of square deviations: 496563085.69230676
[2025-10-12 20:07:16] 2025-10-13 00:06:17,441 | INFO     | sum of deviations: -30219353488.692307
[2025-10-12 20:07:16] 2025-10-13 00:06:17,441 | INFO     | mean x: 1760310393.6153846
[2025-10-12 20:07:16] 2025-10-13 00:06:17,441 | INFO     | mean y: 2388584.829059829
[2025-10-12 20:07:16] 2025-10-13 00:06:17,441 | INFO     | -- intersect: 107129647068.64783
[2025-10-12 20:07:16] 2025-10-13 00:06:17,441 | INFO     | intersect: 107129647068.64783
[2025-10-12 20:07:16] 2025-10-13 00:06:17,442 | INFO     | chi2: 4.294839682548482
[2025-10-12 20:07:16] 2025-10-13 00:06:17,442 | INFO     | current chi2=4.294839682548482 (change=25.974611271225108 %)
[2025-10-12 20:07:16] 2025-10-13 00:06:17,442 | INFO     | sum of square deviations: 435561314.99107105
[2025-10-12 20:07:16] 2025-10-13 00:06:17,442 | INFO     | sum of deviations: -33336959477.357143
[2025-10-12 20:07:16] 2025-10-13 00:06:17,442 | INFO     | mean x: 1760310546.1339285
[2025-10-12 20:07:16] 2025-10-13 00:06:17,442 | INFO     | mean y: 2396251.3571428573
[2025-10-12 20:07:16] 2025-10-13 00:06:17,442 | INFO     | -- intersect: 134732913687.76953
[2025-10-12 20:07:16] 2025-10-13 00:06:17,442 | INFO     | intersect: 134732913687.76953
[2025-10-12 20:07:16] 2025-10-13 00:06:17,443 | INFO     | chi2: 4.244566287626398
[2025-10-12 20:07:16] 2025-10-13 00:06:17,443 | INFO     | current chi2=4.244566287626398 (change=1.1705534696990787 %)
[2025-10-12 20:07:16] 2025-10-13 00:06:17,443 | INFO     | left removable region: 20
[2025-10-12 20:07:16] 2025-10-13 00:06:17,443 | INFO     | sum of square deviations: 233616720.98901102
[2025-10-12 20:07:16] 2025-10-13 00:06:17,443 | INFO     | sum of deviations: 801077894.1098901
[2025-10-12 20:07:16] 2025-10-13 00:06:17,443 | INFO     | mean x: 1760310515.7032967
[2025-10-12 20:07:16] 2025-10-13 00:06:17,444 | INFO     | mean y: 2496132.967032967
[2025-10-12 20:07:16] 2025-10-13 00:06:17,444 | INFO     | -- intersect: -6033655024.917862
[2025-10-12 20:07:16] 2025-10-13 00:06:17,444 | INFO     | intersect: -6033655024.917862
[2025-10-12 20:07:16] 2025-10-13 00:06:17,444 | INFO     | chi2: 0.00023397631954840393
[2025-10-12 20:07:16] 2025-10-13 00:06:17,444 | INFO     | -- intersect: -6033655024.917862
[2025-10-12 20:07:16] 2025-10-13 00:06:17,444 | INFO     | current memory leak: 3.43 B/s (using 91 data points, chi2=0.00)
[2025-10-12 20:07:16] 2025-10-13 00:06:17,444 | INFO     | could have reported an average CPU frequency of 3147 MHz (8 samples)
[2025-10-12 20:07:16] 2025-10-13 00:06:17,445 | INFO     | ..............................
[2025-10-12 20:07:16] 2025-10-13 00:06:17,445 | INFO     | . Timing measurements:
[2025-10-12 20:07:16] 2025-10-13 00:06:17,445 | INFO     | . get job = 0 s
[2025-10-12 20:07:16] 2025-10-13 00:06:17,445 | INFO     | . initial setup = 2 s
[2025-10-12 20:07:16] 2025-10-13 00:06:17,445 | INFO     | . payload setup = 8 s
[2025-10-12 20:07:16] 2025-10-13 00:06:17,445 | INFO     | . stage-in = 0 s
[2025-10-12 20:07:16] 2025-10-13 00:06:17,445 | INFO     | . payload execution = 7420 s
[2025-10-12 20:07:16] 2025-10-13 00:06:17,445 | INFO     | . stage-out = 1 s
[2025-10-12 20:07:16] 2025-10-13 00:06:17,445 | INFO     | . log creation = 0 s
[2025-10-12 20:07:16] 2025-10-13 00:06:17,445 | INFO     | ..............................
[2025-10-12 20:07:16] 2025-10-13 00:06:17,527 | INFO     | 
[2025-10-12 20:07:16] 2025-10-13 00:06:17,527 | INFO     | job summary report
[2025-10-12 20:07:16] 2025-10-13 00:06:17,527 | INFO     | --------------------------------------------------
[2025-10-12 20:07:16] 2025-10-13 00:06:17,527 | INFO     | PanDA job id: 6840748978
[2025-10-12 20:07:16] 2025-10-13 00:06:17,527 | INFO     | task id: 46676269
[2025-10-12 20:07:16] 2025-10-13 00:06:17,527 | INFO     | errors: (none)
[2025-10-12 20:07:16] 2025-10-13 00:06:17,527 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:07:16] 2025-10-13 00:06:17,527 | INFO     | pilot state: finished 
[2025-10-12 20:07:16] 2025-10-13 00:06:17,527 | INFO     | transexitcode: 0
[2025-10-12 20:07:16] 2025-10-13 00:06:17,527 | INFO     | exeerrorcode: 0
[2025-10-12 20:07:16] 2025-10-13 00:06:17,527 | INFO     | exeerrordiag: 
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | exitcode: 0
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | exitmsg: OK
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | cpuconsumptiontime: 35253 s
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | nevents: 400
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | neventsw: 0
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | pid: 3500996
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | pgrp: 3500996
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | corecount: 8
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | event service: False
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | sizes: {0: 2348857, 7: 2349119, 11: 2349147, 7432: 2376427, 7434: 2385481, 7442: 2385619}
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | --------------------------------------------------
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | 
[2025-10-12 20:07:16] 2025-10-13 00:06:17,528 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 20:07:16] 2025-10-13 00:06:17,569 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:07:16] 2025-10-13 00:06:17,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,571 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:07:16] 2025-10-13 00:06:17,571 | INFO     | job 6840748978 has completed (purged errors)
[2025-10-12 20:07:16] 2025-10-13 00:06:17,571 | INFO     | overall cleanup function is called
[2025-10-12 20:07:16] 2025-10-13 00:06:18,587 | INFO     | --- collectZombieJob: --- 10, [3500996]
[2025-10-12 20:07:16] 2025-10-13 00:06:18,587 | INFO     | zombie collector waiting for pid 3500996
[2025-10-12 20:07:16] 2025-10-13 00:06:18,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:07:16] 2025-10-13 00:06:18,588 | INFO     | collected zombie processes
[2025-10-12 20:07:16] 2025-10-13 00:06:18,588 | INFO     | will attempt to kill all subprocesses of pid=3500996
[2025-10-12 20:07:16] 2025-10-13 00:06:18,935 | INFO     | process IDs to be killed: [3500996] (in reverse order)
[2025-10-12 20:07:16] 2025-10-13 00:06:19,074 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:07:16] 2025-10-13 00:06:19,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:07:16] 2025-10-13 00:06:19,132 | INFO     | did not find any defunct processes belonging to 3500996
[2025-10-12 20:07:16] 2025-10-13 00:06:19,166 | INFO     | did not find any defunct processes belonging to 3500996
[2025-10-12 20:07:16] 2025-10-13 00:06:19,166 | INFO     | ready for new job
[2025-10-12 20:07:16] 2025-10-13 00:06:19,167 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:07:16] 2025-10-13 00:06:19,168 | INFO     | ***************************************
[2025-10-12 20:07:16] 2025-10-13 00:06:19,168 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:07:16] 2025-10-13 00:06:19,168 | INFO     | ***************************************
[2025-10-12 20:07:16] 2025-10-13 00:06:19,168 | INFO     | 
[2025-10-12 20:07:16] 2025-10-13 00:06:19,173 | INFO     | architecture information:
[2025-10-12 20:07:16] 2025-10-13 00:06:19,174 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:07:16] 2025-10-13 00:06:19,197 | INFO     | cat /etc/os-release:
[2025-10-12 20:07:16] NAME="CentOS Linux"
[2025-10-12 20:07:16] VERSION="7 (Core)"
[2025-10-12 20:07:16] ID="centos"
[2025-10-12 20:07:16] ID_LIKE="rhel fedora"
[2025-10-12 20:07:16] VERSION_ID="7"
[2025-10-12 20:07:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:07:16] ANSI_COLOR="0;31"
[2025-10-12 20:07:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:07:16] HOME_URL="https://www.centos.org/"
[2025-10-12 20:07:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:07:16] 
[2025-10-12 20:07:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:07:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:07:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:07:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:07:16] 
[2025-10-12 20:07:16] 2025-10-13 00:06:19,202 | INFO     | ***************************************
[2025-10-12 20:07:16] 2025-10-13 00:06:19,706 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 20:07:16] 2025-10-13 00:06:19,760 | INFO     | sufficient remaining disk space (127080071168 B)
[2025-10-12 20:07:16] 2025-10-13 00:06:19,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:07:16] 2025-10-13 00:06:19,761 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:07:16] 2025-10-13 00:06:19,761 | INFO     | update_server=False
[2025-10-12 20:07:16] 2025-10-13 00:06:19,761 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:07:16] 2025-10-13 00:06:19,765 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:07:16] 2025-10-13 00:06:19,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:07:16] 2025-10-13 00:06:19,945 | INFO     | all job control threads have been joined
[2025-10-12 20:07:16] 2025-10-13 00:06:19,993 | INFO     | all data control threads have been joined
[2025-10-12 20:07:16] 2025-10-13 00:06:20,061 | INFO     | all payload control threads have been joined
[2025-10-12 20:07:16] 2025-10-13 00:06:20,194 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 20:07:16] 2025-10-13 00:06:20,194 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 20:07:16] 2025-10-13 00:06:20,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:07:16] 2025-10-13 00:06:20,194 | INFO     | will abort loop
[2025-10-12 20:07:16] 2025-10-13 00:06:20,767 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:20,802 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:20,843 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:20,950 | INFO     | [job] control thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:20,999 | INFO     | [data] control thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:21,067 | INFO     | [payload] control thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:21,192 | INFO     | [job] validate thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:21,205 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:21,250 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:21,320 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:21,686 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:21,771 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:21,795 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:22,207 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:22,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:07:16] 2025-10-13 00:06:23,547 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:23,816 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:07:16] 2025-10-13 00:06:50,257 | INFO     | PID=3490340 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:07:16] 2025-10-13 00:06:50,258 | INFO     | .. there are 24 such processes running
[2025-10-12 20:07:16] 2025-10-13 00:06:50,258 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:07:16] 2025-10-13 00:06:50,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:07:16] 2025-10-13 00:06:50,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:07:16] 2025-10-13 00:07:10,004 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:07:16] 2025-10-13 00:07:11,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140174292354880)>', '<ExcThread(monitor, started 140173924865792)>']
[2025-10-12 20:07:16] 2025-10-13 00:07:11,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:07:16] 2025-10-13 00:07:11,408 | INFO     | [monitor] control thread has ended
[2025-10-12 20:07:16] 2025-10-13 00:07:16,035 | INFO     | all workflow threads have been joined
[2025-10-12 20:07:16] 2025-10-13 00:07:16,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:07:16] 2025-10-13 00:07:16,035 | INFO     | traces error code: 0
[2025-10-12 20:07:16] 2025-10-13 00:07:16,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:07:16] 2025-10-13 00:07:16,251 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:07:16] 2025-10-13 00:07:16,254 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:07:16] 2025-10-13 00:07:16,257 [wrapper] pilotpid: 3490340
[2025-10-12 20:07:16] 2025-10-13 00:07:16,266 [wrapper] Pilot exit status: 0
[2025-10-12 20:07:16] 2025-10-13 00:07:16,289 [wrapper] pandaids: 6840748978
[2025-10-12 20:07:16] 2025-10-13 00:07:16,396 [wrapper] cleanup supervisor_pilot 3727427 3490341
[2025-10-12 20:07:16] 2025-10-13 00:07:16,409 [wrapper] Test setup, not cleaning
[2025-10-12 20:07:16] 2025-10-13 00:07:16,413 [wrapper] apfmon messages muted
[2025-10-12 20:07:16] 2025-10-13 00:07:16,422 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:07:16] 2025-10-13 00:07:16,425 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:07:16]  *** Error codes and diagnostics ***
[2025-10-12 20:07:16]     "exeErrorCode": 0,
[2025-10-12 20:07:16]     "exeErrorDiag": "",
[2025-10-12 20:07:16]     "pilotErrorCode": 0,
[2025-10-12 20:07:16]     "pilotErrorDiag": "",
[2025-10-12 20:07:16]  *** Listing of results directory ***
[2025-10-12 20:07:16] total 418584
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:24 queuedata.json
[2025-10-12 20:07:16] -rwx------. 1 boincer umatlas     36292 Oct 12 16:24 runpilot2-wrapper.sh
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:07:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:01 run_atlas
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:01 job.xml
[2025-10-12 20:07:16] -rw-r--r--. 2 boincer umatlas 221728279 Oct 12 18:01 EVNT.46676267._004494.pool.root.1
[2025-10-12 20:07:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:01 start_atlas.sh
[2025-10-12 20:07:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:01 shared
[2025-10-12 20:07:16] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 18:01 input.tar.gz
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:01 boinc_lockfile
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 18:01 pandaJob.out
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas    975528 Oct 12 18:01 agis_schedconf.cvmfs.json
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:07:16] drwx------. 5 boincer umatlas      4096 Oct 12 18:01 pilot3
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas 200213467 Oct 12 20:01 HITS.46676269._088544.pool.root.1
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas       529 Oct 12 20:01 boinc_task_state.xml
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas      6946 Oct 12 20:02 init_data.xml
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas        95 Oct 12 20:06 pilot_heartbeat.json
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas      1043 Oct 12 20:06 memory_monitor_summary.json
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas    365320 Oct 12 20:06 log.46676269._088544.job.log.tgz.1
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas      7810 Oct 12 20:06 heartbeat.json
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 20:07 boinc_mmap_file
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas        27 Oct 12 20:07 wrapper_checkpoint.txt
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas      5011 Oct 12 20:07 pilotlog.txt
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas   1027209 Oct 12 20:07 log.46676269._088544.job.log.1
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas       357 Oct 12 20:07 output.list
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:07 runtime_log
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas   1413120 Oct 12 20:07 result.tar.gz
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 20:07 runtime_log.err
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas       656 Oct 12 20:07 aKqMDmsnHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfRlNDmiaYVLm.diag
[2025-10-12 20:07:16] -rw-r--r--. 1 boincer umatlas     20982 Oct 12 20:07 stderr.txt
[2025-10-12 20:07:16] HITS file was successfully produced:
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas 200213467 Oct 12 20:01 shared/HITS.pool.root.1
[2025-10-12 20:07:16]  *** Contents of shared directory: ***
[2025-10-12 20:07:16] total 414016
[2025-10-12 20:07:16] -rw-r--r--. 2 boincer umatlas 221728279 Oct 12 18:01 ATLAS.root_0
[2025-10-12 20:07:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:01 start_atlas.sh
[2025-10-12 20:07:16] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 18:01 input.tar.gz
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas 200213467 Oct 12 20:01 HITS.pool.root.1
[2025-10-12 20:07:16] -rw-------. 1 boincer umatlas   1413120 Oct 12 20:07 result.tar.gz
20:07:18 (3485686): run_atlas exited; CPU time 35406.865197
20:07:18 (3485686): called boinc_finish(0)

</stderr_txt>
]]>

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