Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:52:43 (3579998): wrapper (7.7.26015): starting
00:52:43 (3579998): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 00:52:43] Arguments: --nthreads 2
[2025-10-13 00:52:43] Threads: 2
[2025-10-13 00:52:43] Checking for CVMFS
[2025-10-13 00:52:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:52:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:52:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:52:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:52:52] 2.11.0.0 3580198 0 23896 151640 3 1 2418765 4194304 0 130560 0 0 0.000 1291 891 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 00:52:52] CVMFS is ok
[2025-10-13 00:52:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:52:52] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 00:52:52] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 00:52:52] Further information can be found at the LHC@home message board.
[2025-10-13 00:52:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:52:52] Checking for apptainer binary...
[2025-10-13 00:52:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:52:52] Running /usr/bin/apptainer --version
[2025-10-13 00:52:54] apptainer version 1.2.2-1.el8
[2025-10-13 00:52:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:52:54] bottom
[2025-10-13 00:52:54] apptainer works
[2025-10-13 00:52:55] Set ATHENA_PROC_NUMBER=2
[2025-10-13 00:52:55] Set ATHENA_CORE_NUMBER=2
[2025-10-13 00:52:55] Starting ATLAS job with PandaID=6840428866
[2025-10-13 00:52:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:01:29]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:01:29] 2025-10-12 23:00:55,121 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.267
[2025-10-13 01:01:29] 2025-10-12 23:00:55,122 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6840428866/memory_monitor_output.txt
[2025-10-13 01:01:29] 2025-10-12 23:00:55,122 | INFO     | memory summary dictionary not yet available
[2025-10-13 01:01:29] 2025-10-12 23:00:55,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:01:29] 2025-10-12 23:00:55,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:01:29] 2025-10-12 23:00:55,123 | INFO     | could have reported an average CPU frequency of 1852 MHz (4 samples)
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | ..............................
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . Timing measurements:
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . get job = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . initial setup = 3 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . payload setup = 13 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . stage-in = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . payload execution = 224 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | . stage-out = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | . log creation = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | ..............................
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6840428866/pilotlog.txt
[2025-10-13 01:01:29] 2025-10-12 23:00:55,141 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-13 01:01:29] - Log from pilotlog.txt -
[2025-10-13 01:01:29] 2025-10-12 23:00:54,898 | INFO     | time since job start (452s) is within the limit (172800.0s)
[2025-10-13 01:01:29] 2025-10-12 23:00:55,120 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-13 01:01:29] 2025-10-12 23:00:55,121 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.267
[2025-10-13 01:01:29] 2025-10-12 23:00:55,122 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6840428866/memory_monitor_output.txt
[2025-10-13 01:01:29] 2025-10-12 23:00:55,122 | INFO     | memory summary dictionary not yet available
[2025-10-13 01:01:29] 2025-10-12 23:00:55,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:01:29] 2025-10-12 23:00:55,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:01:29] 2025-10-12 23:00:55,123 | INFO     | could have reported an average CPU frequency of 1852 MHz (4 samples)
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | ..............................
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . Timing measurements:
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . get job = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . initial setup = 3 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . payload setup = 13 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . stage-in = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . payload execution = 224 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | . stage-out = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | . log creation = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | ..............................
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6840428866/pilotlog.txt
[2025-10-13 01:01:29] 2025-10-12 23:00:55,142 | WARNING  | 
[2025-10-13 01:01:29] [begin log extracts]
[2025-10-13 01:01:29] - Log from pilotlog.txt -
[2025-10-13 01:01:29] 2025-10-12 23:00:54,898 | INFO     | time since job start (452s) is within the limit (172800.0s)
[2025-10-13 01:01:29] 2025-10-12 23:00:55,120 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-13 01:01:29] 2025-10-12 23:00:55,121 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.267
[2025-10-13 01:01:29] 2025-10-12 23:00:55,122 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6840428866/memory_monitor_output.txt
[2025-10-13 01:01:29] 2025-10-12 23:00:55,122 | INFO     | memory summary dictionary not yet available
[2025-10-13 01:01:29] 2025-10-12 23:00:55,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:01:29] 2025-10-12 23:00:55,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:01:29] 2025-10-12 23:00:55,123 | INFO     | could have reported an average CPU frequency of 1852 MHz (4 samples)
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | ..............................
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . Timing measurements:
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . get job = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . initial setup = 3 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . payload setup = 13 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . stage-in = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,124 | INFO     | . payload execution = 224 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | . stage-out = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | . log creation = 0 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | ..............................
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-13 01:01:29] 2025-10-12 23:00:55,125 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6840428866/pilotlog.txt
[2025-10-13 01:01:29] [end log extracts]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,142 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-13 01:01:29] 2025-10-12 23:00:55,143 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-10-13 01:01:29] 2025-10-12 23:00:55,263 | INFO     | 
[2025-10-13 01:01:29] 2025-10-12 23:00:55,263 | INFO     | job summary report
[2025-10-13 01:01:29] 2025-10-12 23:00:55,263 | INFO     | --------------------------------------------------
[2025-10-13 01:01:29] 2025-10-12 23:00:55,263 | INFO     | PanDA job id: 6840428866
[2025-10-13 01:01:29] 2025-10-12 23:00:55,264 | INFO     | task id: 46676269
[2025-10-13 01:01:29] 2025-10-12 23:00:55,264 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-13 00:57:29,870 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-13 01:01:29] 2025-10-12 23:00:55,264 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:01:29] 2025-10-12 23:00:55,264 | INFO     | pilot state: failed 
[2025-10-13 01:01:29] 2025-10-12 23:00:55,264 | INFO     | transexitcode: 65
[2025-10-13 01:01:29] 2025-10-12 23:00:55,264 | INFO     | exeerrorcode: 65
[2025-10-13 01:01:29] 2025-10-12 23:00:55,264 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-13 01:01:29] 2025-10-12 23:00:55,265 | INFO     | exitcode: 65
[2025-10-13 01:01:29] 2025-10-12 23:00:55,265 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-13 01:01:29] 2025-10-12 23:00:55,265 | INFO     | cpuconsumptiontime: 153 s
[2025-10-13 01:01:29] 2025-10-12 23:00:55,265 | INFO     | nevents: 0
[2025-10-13 01:01:29] 2025-10-12 23:00:55,265 | INFO     | neventsw: 0
[2025-10-13 01:01:29] 2025-10-12 23:00:55,265 | INFO     | pid: 3590665
[2025-10-13 01:01:29] 2025-10-12 23:00:55,265 | INFO     | pgrp: 3590665
[2025-10-13 01:01:29] 2025-10-12 23:00:55,265 | INFO     | corecount: 2
[2025-10-13 01:01:29] 2025-10-12 23:00:55,266 | INFO     | event service: False
[2025-10-13 01:01:29] 2025-10-12 23:00:55,266 | INFO     | sizes: {0: 2348857, 1: 2348857, 7: 2349147, 11: 2349175, 302: 2372520, 303: 2372524, 305: 2377059, 435: 2377197}
[2025-10-13 01:01:29] 2025-10-12 23:00:55,266 | INFO     | --------------------------------------------------
[2025-10-13 01:01:29] 2025-10-12 23:00:55,266 | INFO     | 
[2025-10-13 01:01:29] 2025-10-12 23:00:55,266 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 01:01:29] 2025-10-12 23:00:55,290 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,291 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,291 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,291 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,291 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,291 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,292 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,293 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:01:29] 2025-10-12 23:00:55,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,293 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:01:29] 2025-10-12 23:00:55,294 | INFO     | job 6840428866 has completed (purged errors)
[2025-10-13 01:01:29] 2025-10-12 23:00:55,294 | INFO     | overall cleanup function is called
[2025-10-13 01:01:29] 2025-10-12 23:00:56,300 | INFO     | --- collectZombieJob: --- 10, [3590665]
[2025-10-13 01:01:29] 2025-10-12 23:00:56,301 | INFO     | zombie collector waiting for pid 3590665
[2025-10-13 01:01:29] 2025-10-12 23:00:56,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:01:29] 2025-10-12 23:00:56,301 | INFO     | collected zombie processes
[2025-10-13 01:01:29] 2025-10-12 23:00:56,301 | INFO     | will attempt to kill all subprocesses of pid=3590665
[2025-10-13 01:01:29] 2025-10-12 23:00:56,373 | INFO     | process IDs to be killed: [3590665] (in reverse order)
[2025-10-13 01:01:29] 2025-10-12 23:00:56,419 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:01:29] 2025-10-12 23:00:56,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:01:29] 2025-10-12 23:00:56,423 | INFO     | did not find any defunct processes belonging to 3590665
[2025-10-13 01:01:29] 2025-10-12 23:00:56,426 | INFO     | did not find any defunct processes belonging to 3590665
[2025-10-13 01:01:29] 2025-10-12 23:00:56,426 | INFO     | ready for new job
[2025-10-13 01:01:29] 2025-10-12 23:00:56,426 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:01:29] 2025-10-12 23:00:56,428 | INFO     | ***************************************
[2025-10-13 01:01:29] 2025-10-12 23:00:56,428 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:01:29] 2025-10-12 23:00:56,428 | INFO     | ***************************************
[2025-10-13 01:01:29] 2025-10-12 23:00:56,428 | INFO     | 
[2025-10-13 01:01:29] 2025-10-12 23:00:56,441 | INFO     | architecture information:
[2025-10-13 01:01:29] 2025-10-12 23:00:56,441 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:01:29] 2025-10-12 23:00:56,458 | INFO     | cat /etc/os-release:
[2025-10-13 01:01:29] NAME="CentOS Linux"
[2025-10-13 01:01:29] VERSION="7 (Core)"
[2025-10-13 01:01:29] ID="centos"
[2025-10-13 01:01:29] ID_LIKE="rhel fedora"
[2025-10-13 01:01:29] VERSION_ID="7"
[2025-10-13 01:01:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:01:29] ANSI_COLOR="0;31"
[2025-10-13 01:01:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:01:29] HOME_URL="https://www.centos.org/"
[2025-10-13 01:01:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:01:29] 
[2025-10-13 01:01:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:01:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:01:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:01:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:01:29] 
[2025-10-13 01:01:29] 2025-10-12 23:00:56,458 | INFO     | ***************************************
[2025-10-13 01:01:29] 2025-10-12 23:00:56,961 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 01:01:29] 2025-10-12 23:00:56,980 | INFO     | sufficient remaining disk space (214344663040 B)
[2025-10-13 01:01:29] 2025-10-12 23:00:56,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:01:29] 2025-10-12 23:00:56,980 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:01:29] 2025-10-12 23:00:56,981 | INFO     | update_server=False
[2025-10-13 01:01:29] 2025-10-12 23:00:56,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:01:29] 2025-10-12 23:00:56,981 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:01:29] 2025-10-12 23:00:56,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:01:29] 2025-10-12 23:00:57,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:01:29] 2025-10-12 23:00:57,046 | INFO     | aborting loop
[2025-10-13 01:01:29] 2025-10-12 23:00:57,409 | INFO     | all payload control threads have been joined
[2025-10-13 01:01:29] 2025-10-12 23:00:57,581 | INFO     | all data control threads have been joined
[2025-10-13 01:01:29] 2025-10-12 23:00:57,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:01:29] 2025-10-12 23:00:57,986 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:57,987 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:57,991 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:58,018 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:58,051 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:58,083 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:58,185 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:58,386 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:58,412 | INFO     | [payload] control thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:58,522 | INFO     | all job control threads have been joined
[2025-10-13 01:01:29] 2025-10-12 23:00:58,539 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:58,586 | INFO     | [data] control thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:58,897 | INFO     | [job] validate thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:59,211 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:59,527 | INFO     | [job] control thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:00:59,666 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:01:00,987 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:01:29] 2025-10-12 23:01:22,238 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:01:29] 2025-10-12 23:01:22,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140623010936640)>', '<ExcThread(monitor, started 140622547621632)>']
[2025-10-13 01:01:29] 2025-10-12 23:01:27,328 | INFO     | all workflow threads have been joined
[2025-10-13 01:01:29] 2025-10-12 23:01:27,329 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:01:29] 2025-10-12 23:01:27,329 | INFO     | traces error code: 0
[2025-10-13 01:01:29] 2025-10-12 23:01:27,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:01:29] 2025-10-12 23:01:28,062 | INFO     | PID=3584168 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:01:29] 2025-10-12 23:01:28,064 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:01:29] 2025-10-12 23:01:28,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:01:29] 2025-10-12 23:01:28,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:01:29] 2025-10-12 23:01:28,064 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:01:29] 2025-10-12 23:01:28,064 | INFO     | [monitor] control thread has ended
[2025-10-13 01:01:29] 2025-10-12 23:01:28,639 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:01:29] 2025-10-12 23:01:28,642 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:01:29] 2025-10-12 23:01:28,646 [wrapper] pilotpid: 3584168
[2025-10-13 01:01:29] 2025-10-12 23:01:28,649 [wrapper] Pilot exit status: 0
[2025-10-13 01:01:29] 2025-10-12 23:01:28,757 [wrapper] pandaids: 6840428866
[2025-10-13 01:01:29] 2025-10-12 23:01:28,782 [wrapper] cleanup supervisor_pilot 3584174 3584169
[2025-10-13 01:01:29] 2025-10-12 23:01:28,787 [wrapper] Test setup, not cleaning
[2025-10-13 01:01:29] 2025-10-12 23:01:28,791 [wrapper] apfmon messages muted
[2025-10-13 01:01:29] 2025-10-12 23:01:28,795 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:01:29] 2025-10-12 23:01:28,799 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:01:29]  *** Error codes and diagnostics ***
[2025-10-13 01:01:29]     "exeErrorCode": 65,
[2025-10-13 01:01:29]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-13 01:01:29]     "pilotErrorCode": 1305,
[2025-10-13 01:01:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-13 01:01:29]  *** Listing of results directory ***
[2025-10-13 01:01:29] total 219272
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:49 pilot3.tar.gz
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc      5112 Oct 12 19:13 queuedata.json
[2025-10-13 01:01:29] -rwx------ 1 boinc boinc     36292 Oct 12 19:14 runpilot2-wrapper.sh
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc       100 Oct 13 00:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:01:29] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 00:52 run_atlas
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc       105 Oct 13 00:52 job.xml
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc      5984 Oct 13 00:52 init_data.xml
[2025-10-13 01:01:29] -rw-r--r-- 2 boinc boinc 220205530 Oct 13 00:52 EVNT.46676267._004803.pool.root.1
[2025-10-13 01:01:29] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:52 start_atlas.sh
[2025-10-13 01:01:29] drwxrwx--x 2 boinc boinc        68 Oct 13 00:52 shared
[2025-10-13 01:01:29] -rw-r--r-- 2 boinc boinc    569685 Oct 13 00:52 input.tar.gz
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:52 boinc_lockfile
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc      2550 Oct 13 00:52 pandaJob.out
[2025-10-13 01:01:29] -rw------- 1 boinc boinc    975603 Oct 13 00:53 agis_schedconf.cvmfs.json
[2025-10-13 01:01:29] -rw------- 1 boinc boinc   1560580 Oct 13 00:53 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:01:29] drwx------ 5 boinc boinc      4096 Oct 13 00:53 pilot3
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc       524 Oct 13 00:56 boinc_task_state.xml
[2025-10-13 01:01:29] -rw------- 1 boinc boinc     48861 Oct 13 00:58 log.46676269._084450.job.log.tgz.1
[2025-10-13 01:01:29] -rw------- 1 boinc boinc      8066 Oct 13 01:00 heartbeat.json
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:01 boinc_mmap_file
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc        23 Oct 13 01:01 wrapper_checkpoint.txt
[2025-10-13 01:01:29] -rw------- 1 boinc boinc        95 Oct 13 01:01 pilot_heartbeat.json
[2025-10-13 01:01:29] -rw------- 1 boinc boinc       747 Oct 13 01:01 pilotlog.txt
[2025-10-13 01:01:29] -rw------- 1 boinc boinc    173855 Oct 13 01:01 log.46676269._084450.job.log.1
[2025-10-13 01:01:29] -rw------- 1 boinc boinc       188 Oct 13 01:01 output.list
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:01 runtime_log
[2025-10-13 01:01:29] -rw------- 1 boinc boinc    245760 Oct 13 01:01 result.tar.gz
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc      8505 Oct 13 01:01 runtime_log.err
[2025-10-13 01:01:29] -rw------- 1 boinc boinc       640 Oct 13 01:01 dWeNDmTpES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxokNDmtmtTHo.diag
[2025-10-13 01:01:29] -rw-r--r-- 1 boinc boinc     21889 Oct 13 01:01 stderr.txt
[2025-10-13 01:01:29] No HITS result produced
[2025-10-13 01:01:29]  *** Contents of shared directory: ***
[2025-10-13 01:01:29] total 215864
[2025-10-13 01:01:29] -rw-r--r-- 2 boinc boinc 220205530 Oct 13 00:52 ATLAS.root_0
[2025-10-13 01:01:29] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:52 start_atlas.sh
[2025-10-13 01:01:29] -rw-r--r-- 2 boinc boinc    569685 Oct 13 00:52 input.tar.gz
[2025-10-13 01:01:29] -rw------- 1 boinc boinc    245760 Oct 13 01:01 result.tar.gz
01:01:31 (3579998): run_atlas exited; CPU time 138.253111
01:01:31 (3579998): called boinc_finish(0)

</stderr_txt>
]]>

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