Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:51:14 (25104): wrapper (7.7.26015): starting
17:51:14 (25104): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:51:14] Arguments: --nthreads 8
[2025-10-12 17:51:14] Threads: 8
[2025-10-12 17:51:14] Checking for CVMFS
[2025-10-12 17:51:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:51:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:51:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:51:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:51:15] 2.11.2.0 2876 1480 67328 151638 2 57 14013361 20275201 1 130560 0 1031833 99.989 51817 37386 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:51:15] CVMFS is ok
[2025-10-12 17:51:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:51:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:51:15] Further information can be found at the LHC@home message board.
[2025-10-12 17:51:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:51:15] Checking for apptainer binary...
[2025-10-12 17:51:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:51:15] Running /usr/bin/apptainer --version
[2025-10-12 17:51:15] apptainer version 1.3.2-1.el7
[2025-10-12 17:51:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:51:16] c-204-40.aglt2.org
[2025-10-12 17:51:16] apptainer works
[2025-10-12 17:51:16] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:51:16] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:51:17] Starting ATLAS job with PandaID=6840531987
[2025-10-12 17:51:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:54:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:54:52] 2025-10-12 23:54:02,317 | INFO     | -- intersect: 4632811754.099231
[2025-10-12 19:54:52] 2025-10-12 23:54:02,317 | INFO     | intersect: 4632811754.099231
[2025-10-12 19:54:52] 2025-10-12 23:54:02,317 | INFO     | chi2: 0.03801553737104554
[2025-10-12 19:54:52] 2025-10-12 23:54:02,317 | INFO     | current chi2=0.03801553737104554 (change=32.76917218976261 %)
[2025-10-12 19:54:52] 2025-10-12 23:54:02,317 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,318 | INFO     | sum of deviations: 1940737569.9999998
[2025-10-12 19:54:52] 2025-10-12 23:54:02,318 | INFO     | mean x: 1760310012.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,318 | INFO     | mean y: 2526973.4285714286
[2025-10-12 19:54:52] 2025-10-12 23:54:02,318 | INFO     | -- intersect: -9515546320.603853
[2025-10-12 19:54:52] 2025-10-12 23:54:02,318 | INFO     | intersect: -9515546320.603853
[2025-10-12 19:54:52] 2025-10-12 23:54:02,319 | INFO     | chi2: 0.0006147086029934822
[2025-10-12 19:54:52] 2025-10-12 23:54:02,319 | INFO     | current chi2=0.0006147086029934822 (change=98.38300693478644 %)
[2025-10-12 19:54:52] 2025-10-12 23:54:02,319 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,320 | INFO     | sum of deviations: 1485742840.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,320 | INFO     | mean x: 1760310164.5
[2025-10-12 19:54:52] 2025-10-12 23:54:02,320 | INFO     | mean y: 2528387.48
[2025-10-12 19:54:52] 2025-10-12 23:54:02,320 | INFO     | -- intersect: -8432719511.677336
[2025-10-12 19:54:52] 2025-10-12 23:54:02,320 | INFO     | intersect: -8432719511.677336
[2025-10-12 19:54:52] 2025-10-12 23:54:02,320 | INFO     | chi2: 0.00045422115430074654
[2025-10-12 19:54:52] 2025-10-12 23:54:02,320 | INFO     | current chi2=0.00045422115430074654 (change=26.10789045593321 %)
[2025-10-12 19:54:52] 2025-10-12 23:54:02,321 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,321 | INFO     | sum of deviations: 1090890206.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,321 | INFO     | mean x: 1760310317.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,321 | INFO     | mean y: 2529750.6736842105
[2025-10-12 19:54:52] 2025-10-12 23:54:02,321 | INFO     | -- intersect: -7221327595.468529
[2025-10-12 19:54:52] 2025-10-12 23:54:02,322 | INFO     | intersect: -7221327595.468529
[2025-10-12 19:54:52] 2025-10-12 23:54:02,322 | INFO     | chi2: 0.0003142943326864642
[2025-10-12 19:54:52] 2025-10-12 23:54:02,322 | INFO     | current chi2=0.0003142943326864642 (change=30.805879534539404 %)
[2025-10-12 19:54:52] 2025-10-12 23:54:02,322 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 19:54:52] 2025-10-12 23:54:02,323 | INFO     | sum of deviations: 749982068.0000001
[2025-10-12 19:54:52] 2025-10-12 23:54:02,323 | INFO     | mean x: 1760310469.5
[2025-10-12 19:54:52] 2025-10-12 23:54:02,323 | INFO     | mean y: 2531053.3333333335
[2025-10-12 19:54:52] 2025-10-12 23:54:02,323 | INFO     | -- intersect: -5838477190.059859
[2025-10-12 19:54:52] 2025-10-12 23:54:02,323 | INFO     | intersect: -5838477190.059859
[2025-10-12 19:54:52] 2025-10-12 23:54:02,323 | INFO     | chi2: 0.0001625864469789507
[2025-10-12 19:54:52] 2025-10-12 23:54:02,323 | INFO     | current chi2=0.0001625864469789507 (change=48.26936725545581 %)
[2025-10-12 19:54:52] 2025-10-12 23:54:02,324 | INFO     | sum of square deviations: 190403570.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,324 | INFO     | sum of deviations: 550100074.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,324 | INFO     | mean x: 1760310622.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,324 | INFO     | mean y: 2531905.9529411765
[2025-10-12 19:54:52] 2025-10-12 23:54:02,324 | INFO     | -- intersect: -5083228846.459349
[2025-10-12 19:54:52] 2025-10-12 23:54:02,324 | INFO     | intersect: -5083228846.459349
[2025-10-12 19:54:52] 2025-10-12 23:54:02,325 | INFO     | chi2: 0.00012485674582307413
[2025-10-12 19:54:52] 2025-10-12 23:54:02,325 | INFO     | current chi2=0.00012485674582307413 (change=23.20593250971359 %)
[2025-10-12 19:54:52] 2025-10-12 23:54:02,325 | INFO     | left removable region: 70
[2025-10-12 19:54:52] 2025-10-12 23:54:02,325 | INFO     | sum of square deviations: 26400495.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,325 | INFO     | sum of deviations: 5105456.0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,326 | INFO     | mean x: 1760311506.5
[2025-10-12 19:54:52] 2025-10-12 23:54:02,326 | INFO     | mean y: 2535301.6818181816
[2025-10-12 19:54:52] 2025-10-12 23:54:02,326 | INFO     | -- intersect: -337882290.59171546
[2025-10-12 19:54:52] 2025-10-12 23:54:02,326 | INFO     | intersect: -337882290.59171546
[2025-10-12 19:54:52] 2025-10-12 23:54:02,326 | INFO     | chi2: 1.4801810939288849e-05
[2025-10-12 19:54:52] 2025-10-12 23:54:02,326 | INFO     | -- intersect: -337882290.59171546
[2025-10-12 19:54:52] 2025-10-12 23:54:02,327 | INFO     | current memory leak: 0.19 B/s (using 44 data points, chi2=0.00)
[2025-10-12 19:54:52] 2025-10-12 23:54:02,327 | INFO     | could have reported an average CPU frequency of 1943 MHz (8 samples)
[2025-10-12 19:54:52] 2025-10-12 23:54:02,327 | INFO     | ..............................
[2025-10-12 19:54:52] 2025-10-12 23:54:02,327 | INFO     | . Timing measurements:
[2025-10-12 19:54:52] 2025-10-12 23:54:02,327 | INFO     | . get job = 0 s
[2025-10-12 19:54:52] 2025-10-12 23:54:02,327 | INFO     | . initial setup = 2 s
[2025-10-12 19:54:52] 2025-10-12 23:54:02,328 | INFO     | . payload setup = 8 s
[2025-10-12 19:54:52] 2025-10-12 23:54:02,328 | INFO     | . stage-in = 0 s
[2025-10-12 19:54:52] 2025-10-12 23:54:02,328 | INFO     | . payload execution = 7309 s
[2025-10-12 19:54:52] 2025-10-12 23:54:02,328 | INFO     | . stage-out = 0 s
[2025-10-12 19:54:52] 2025-10-12 23:54:02,328 | INFO     | . log creation = 0 s
[2025-10-12 19:54:52] 2025-10-12 23:54:02,328 | INFO     | ..............................
[2025-10-12 19:54:52] 2025-10-12 23:54:02,419 | INFO     | 
[2025-10-12 19:54:52] 2025-10-12 23:54:02,419 | INFO     | job summary report
[2025-10-12 19:54:52] 2025-10-12 23:54:02,420 | INFO     | --------------------------------------------------
[2025-10-12 19:54:52] 2025-10-12 23:54:02,420 | INFO     | PanDA job id: 6840531987
[2025-10-12 19:54:52] 2025-10-12 23:54:02,420 | INFO     | task id: 46676269
[2025-10-12 19:54:52] 2025-10-12 23:54:02,420 | INFO     | errors: (none)
[2025-10-12 19:54:52] 2025-10-12 23:54:02,420 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:54:52] 2025-10-12 23:54:02,420 | INFO     | pilot state: finished 
[2025-10-12 19:54:52] 2025-10-12 23:54:02,420 | INFO     | transexitcode: 0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,420 | INFO     | exeerrorcode: 0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,421 | INFO     | exeerrordiag: 
[2025-10-12 19:54:52] 2025-10-12 23:54:02,421 | INFO     | exitcode: 0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,421 | INFO     | exitmsg: OK
[2025-10-12 19:54:52] 2025-10-12 23:54:02,421 | INFO     | cpuconsumptiontime: 54094 s
[2025-10-12 19:54:52] 2025-10-12 23:54:02,421 | INFO     | nevents: 400
[2025-10-12 19:54:52] 2025-10-12 23:54:02,421 | INFO     | neventsw: 0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,421 | INFO     | pid: 2888
[2025-10-12 19:54:52] 2025-10-12 23:54:02,421 | INFO     | pgrp: 2888
[2025-10-12 19:54:52] 2025-10-12 23:54:02,421 | INFO     | corecount: 8
[2025-10-12 19:54:52] 2025-10-12 23:54:02,422 | INFO     | event service: False
[2025-10-12 19:54:52] 2025-10-12 23:54:02,422 | INFO     | sizes: {0: 2348630, 1: 2348885, 7: 2349147, 12: 2349175, 7321: 2376508, 7323: 2385506, 7324: 2385690, 7332: 2385884}
[2025-10-12 19:54:52] 2025-10-12 23:54:02,422 | INFO     | --------------------------------------------------
[2025-10-12 19:54:52] 2025-10-12 23:54:02,422 | INFO     | 
[2025-10-12 19:54:52] 2025-10-12 23:54:02,422 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 19:54:52] 2025-10-12 23:54:02,450 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,450 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,450 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,454 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:54:52] 2025-10-12 23:54:02,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,454 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:54:52] 2025-10-12 23:54:02,455 | INFO     | job 6840531987 has completed (purged errors)
[2025-10-12 19:54:52] 2025-10-12 23:54:02,455 | INFO     | overall cleanup function is called
[2025-10-12 19:54:52] 2025-10-12 23:54:03,463 | INFO     | --- collectZombieJob: --- 10, [2888]
[2025-10-12 19:54:52] 2025-10-12 23:54:03,464 | INFO     | zombie collector waiting for pid 2888
[2025-10-12 19:54:52] 2025-10-12 23:54:03,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:54:52] 2025-10-12 23:54:03,464 | INFO     | collected zombie processes
[2025-10-12 19:54:52] 2025-10-12 23:54:03,464 | INFO     | will attempt to kill all subprocesses of pid=2888
[2025-10-12 19:54:52] 2025-10-12 23:54:03,561 | INFO     | process IDs to be killed: [2888] (in reverse order)
[2025-10-12 19:54:52] 2025-10-12 23:54:03,616 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:54:52] 2025-10-12 23:54:03,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:54:52] 2025-10-12 23:54:03,623 | INFO     | did not find any defunct processes belonging to 2888
[2025-10-12 19:54:52] 2025-10-12 23:54:03,627 | INFO     | did not find any defunct processes belonging to 2888
[2025-10-12 19:54:52] 2025-10-12 23:54:03,627 | INFO     | ready for new job
[2025-10-12 19:54:52] 2025-10-12 23:54:03,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:54:52] 2025-10-12 23:54:03,629 | INFO     | ***************************************
[2025-10-12 19:54:52] 2025-10-12 23:54:03,629 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:54:52] 2025-10-12 23:54:03,630 | INFO     | ***************************************
[2025-10-12 19:54:52] 2025-10-12 23:54:03,630 | INFO     | 
[2025-10-12 19:54:52] 2025-10-12 23:54:03,630 | INFO     | architecture information:
[2025-10-12 19:54:52] 2025-10-12 23:54:03,631 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:54:52] 2025-10-12 23:54:03,648 | INFO     | cat /etc/os-release:
[2025-10-12 19:54:52] NAME="CentOS Linux"
[2025-10-12 19:54:52] VERSION="7 (Core)"
[2025-10-12 19:54:52] ID="centos"
[2025-10-12 19:54:52] ID_LIKE="rhel fedora"
[2025-10-12 19:54:52] VERSION_ID="7"
[2025-10-12 19:54:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:54:52] ANSI_COLOR="0;31"
[2025-10-12 19:54:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:54:52] HOME_URL="https://www.centos.org/"
[2025-10-12 19:54:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:54:52] 
[2025-10-12 19:54:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:54:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:54:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:54:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:54:52] 
[2025-10-12 19:54:52] 2025-10-12 23:54:03,649 | INFO     | ***************************************
[2025-10-12 19:54:52] 2025-10-12 23:54:04,150 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 19:54:52] 2025-10-12 23:54:04,171 | INFO     | sufficient remaining disk space (18554552320 B)
[2025-10-12 19:54:52] 2025-10-12 23:54:04,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:54:52] 2025-10-12 23:54:04,172 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:54:52] 2025-10-12 23:54:04,172 | INFO     | update_server=False
[2025-10-12 19:54:52] 2025-10-12 23:54:04,173 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:54:52] 2025-10-12 23:54:04,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:54:52] 2025-10-12 23:54:04,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:54:52] 2025-10-12 23:54:04,174 | INFO     | aborting loop
[2025-10-12 19:54:52] 2025-10-12 23:54:04,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:54:52] 2025-10-12 23:54:05,077 | INFO     | all job control threads have been joined
[2025-10-12 19:54:52] 2025-10-12 23:54:05,172 | INFO     | all data control threads have been joined
[2025-10-12 19:54:52] 2025-10-12 23:54:05,178 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:05,179 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:05,180 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:05,199 | INFO     | all payload control threads have been joined
[2025-10-12 19:54:52] 2025-10-12 23:54:05,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:54:52] 2025-10-12 23:54:05,479 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:05,798 | INFO     | [job] validate thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:05,860 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:06,083 | INFO     | [job] control thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:06,174 | INFO     | [data] control thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:06,205 | INFO     | [payload] control thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:06,237 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:06,337 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:06,347 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:06,443 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:06,642 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:09,330 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:14,491 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:54:52] 2025-10-12 23:54:15,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:54:52] 2025-10-12 23:54:34,574 | INFO     | PID=28853 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 19:54:52] 2025-10-12 23:54:34,575 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:54:52] 2025-10-12 23:54:34,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:54:52] 2025-10-12 23:54:34,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:54:52] 2025-10-12 23:54:45,564 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:54:52] 2025-10-12 23:54:47,076 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276528338752)>', '<ExcThread(monitor, started 140275477362432)>']
[2025-10-12 19:54:52] 2025-10-12 23:54:47,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:54:52] 2025-10-12 23:54:47,641 | INFO     | [monitor] control thread has ended
[2025-10-12 19:54:52] 2025-10-12 23:54:52,093 | INFO     | all workflow threads have been joined
[2025-10-12 19:54:52] 2025-10-12 23:54:52,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:54:52] 2025-10-12 23:54:52,096 | INFO     | traces error code: 0
[2025-10-12 19:54:52] 2025-10-12 23:54:52,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:54:52] 2025-10-12 23:54:52,233 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:54:52] 2025-10-12 23:54:52,239 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:54:52] 2025-10-12 23:54:52,243 [wrapper] pilotpid: 28853
[2025-10-12 19:54:52] 2025-10-12 23:54:52,247 [wrapper] Pilot exit status: 0
[2025-10-12 19:54:52] 2025-10-12 23:54:52,265 [wrapper] pandaids: 6840531987
[2025-10-12 19:54:52] 2025-10-12 23:54:52,321 [wrapper] cleanup supervisor_pilot 19406 28854
[2025-10-12 19:54:52] 2025-10-12 23:54:52,326 [wrapper] Test setup, not cleaning
[2025-10-12 19:54:52] 2025-10-12 23:54:52,331 [wrapper] apfmon messages muted
[2025-10-12 19:54:52] 2025-10-12 23:54:52,336 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:54:52] 2025-10-12 23:54:52,341 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:54:52]  *** Error codes and diagnostics ***
[2025-10-12 19:54:52]     "exeErrorCode": 0,
[2025-10-12 19:54:52]     "exeErrorDiag": "",
[2025-10-12 19:54:52]     "pilotErrorCode": 0,
[2025-10-12 19:54:52]     "pilotErrorDiag": "",
[2025-10-12 19:54:52]  *** Listing of results directory ***
[2025-10-12 19:54:52] total 414648
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:22 queuedata.json
[2025-10-12 19:54:52] -rwx------ 1 boincer umatlas     36292 Oct 12 14:22 runpilot2-wrapper.sh
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas       100 Oct 12 17:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:54:52] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 17:51 run_atlas
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas       105 Oct 12 17:51 job.xml
[2025-10-12 19:54:52] -rw-r--r-- 2 boincer umatlas 219647339 Oct 12 17:51 EVNT.46676267._004400.pool.root.1
[2025-10-12 19:54:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:51 start_atlas.sh
[2025-10-12 19:54:52] drwxrwx--x 2 boincer umatlas      4096 Oct 12 17:51 shared
[2025-10-12 19:54:52] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 17:51 input.tar.gz
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas         0 Oct 12 17:51 boinc_lockfile
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 17:51 pandaJob.out
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas    975528 Oct 12 17:51 agis_schedconf.cvmfs.json
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas   1560580 Oct 12 17:51 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:54:52] drwx------ 5 boincer umatlas      4096 Oct 12 17:51 pilot3
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 19:47 init_data.xml
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas 198234714 Oct 12 19:53 HITS.46676269._086008.pool.root.1
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas       530 Oct 12 19:53 boinc_task_state.xml
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas      1051 Oct 12 19:53 memory_monitor_summary.json
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas    365219 Oct 12 19:53 log.46676269._086008.job.log.tgz.1
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas      7841 Oct 12 19:54 heartbeat.json
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas        95 Oct 12 19:54 pilot_heartbeat.json
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 19:54 boinc_mmap_file
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas        27 Oct 12 19:54 wrapper_checkpoint.txt
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas      4818 Oct 12 19:54 pilotlog.txt
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas   1041901 Oct 12 19:54 log.46676269._086008.job.log.1
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas       357 Oct 12 19:54 output.list
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas       620 Oct 12 19:54 runtime_log
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas   1423360 Oct 12 19:54 result.tar.gz
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 19:54 runtime_log.err
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas       659 Oct 12 19:54 hezKDmStFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm61kNDm7XgLTm.diag
[2025-10-12 19:54:52] -rw-r--r-- 1 boincer umatlas     20892 Oct 12 19:54 stderr.txt
[2025-10-12 19:54:52] HITS file was successfully produced:
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas 198234714 Oct 12 19:53 shared/HITS.pool.root.1
[2025-10-12 19:54:52]  *** Contents of shared directory: ***
[2025-10-12 19:54:52] total 410064
[2025-10-12 19:54:52] -rw-r--r-- 2 boincer umatlas 219647339 Oct 12 17:51 ATLAS.root_0
[2025-10-12 19:54:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:51 start_atlas.sh
[2025-10-12 19:54:52] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 17:51 input.tar.gz
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas 198234714 Oct 12 19:53 HITS.pool.root.1
[2025-10-12 19:54:52] -rw------- 1 boincer umatlas   1423360 Oct 12 19:54 result.tar.gz
19:54:53 (25104): run_atlas exited; CPU time 54104.689840
19:54:53 (25104): called boinc_finish(0)

</stderr_txt>
]]>

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