Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:56:24 (1410233): wrapper (7.7.26015): starting
17:56:24 (1410233): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:56:24] Arguments: --nthreads 8
[2025-10-12 17:56:24] Threads: 8
[2025-10-12 17:56:24] Checking for CVMFS
[2025-10-12 17:56:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:56:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:56:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:56:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:56:47] 2.13.2.0 6309 6248 144104 151638 2 65 27197297 40960000 26853 16776704 0 16808698 99.725 10525546 29318 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:56:47] CVMFS is ok
[2025-10-12 17:56:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:56:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:56:47] Further information can be found at the LHC@home message board.
[2025-10-12 17:56:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:56:47] Checking for apptainer binary...
[2025-10-12 17:56:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:56:47] Running /usr/bin/apptainer --version
[2025-10-12 17:56:47] apptainer version 1.4.3-1.el9
[2025-10-12 17:56:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:56:48] c-211-35-3.aglt2.org
[2025-10-12 17:56:48] apptainer works
[2025-10-12 17:56:48] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:56:48] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:56:48] Starting ATLAS job with PandaID=6840536117
[2025-10-12 17:56:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:18:39]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:18:39] 2025-10-13 02:17:30,552 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2532.521552083335
[2025-10-12 22:18:39] 2025-10-13 02:17:30,595 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840536117/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:18:39] 2025-10-13 02:17:30,623 | INFO     | extracted standard info from prmon json
[2025-10-12 22:18:39] 2025-10-13 02:17:30,623 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:18:39] 2025-10-13 02:17:30,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:18:39] 2025-10-13 02:17:30,619 | INFO     | monitor loop #959: job 0:6840536117 is in state 'finished'
[2025-10-12 22:18:39] 2025-10-13 02:17:30,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:18:39] 2025-10-13 02:17:30,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:18:39] 2025-10-13 02:17:30,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:18:39] 2025-10-13 02:17:30,677 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:18:39] 2025-10-13 02:17:30,678 | INFO     | sum of square deviations: 5021502799.747008
[2025-10-12 22:18:39] 2025-10-13 02:17:30,685 | INFO     | sum of deviations: 77918035104.78658
[2025-10-12 22:18:39] 2025-10-13 02:17:30,685 | INFO     | mean x: 1760314109.422925
[2025-10-12 22:18:39] 2025-10-13 02:17:30,685 | INFO     | mean y: 2459259.4505928853
[2025-10-12 22:18:39] 2025-10-13 02:17:30,686 | INFO     | -- intersect: -27312116086.475124
[2025-10-12 22:18:39] 2025-10-13 02:17:30,686 | INFO     | intersect: -27312116086.475124
[2025-10-12 22:18:39] 2025-10-13 02:17:30,686 | INFO     | chi2: 3.4265053347282137
[2025-10-12 22:18:39] 2025-10-13 02:17:30,687 | INFO     | sum of square deviations: 4729629693.544334
[2025-10-12 22:18:39] 2025-10-13 02:17:30,688 | INFO     | sum of deviations: 91565491499.15727
[2025-10-12 22:18:39] 2025-10-13 02:17:30,688 | INFO     | mean x: 1760313956.923387
[2025-10-12 22:18:39] 2025-10-13 02:17:30,688 | INFO     | mean y: 2466258.955645161
[2025-10-12 22:18:39] 2025-10-13 02:17:30,688 | INFO     | -- intersect: -34077160075.9608
[2025-10-12 22:18:39] 2025-10-13 02:17:30,688 | INFO     | intersect: -34077160075.9608
[2025-10-12 22:18:39] 2025-10-13 02:17:30,689 | INFO     | chi2: 2.7385603267600667
[2025-10-12 22:18:39] 2025-10-13 02:17:30,689 | INFO     | current chi2=2.7385603267600667 (change=20.077161444802304 %)
[2025-10-12 22:18:39] 2025-10-13 02:17:30,693 | INFO     | right removable region: 247
[2025-10-12 22:18:39] 2025-10-13 02:17:30,694 | INFO     | sum of square deviations: 4729594923.834661
[2025-10-12 22:18:39] 2025-10-13 02:17:30,696 | INFO     | sum of deviations: 14409218193.54841
[2025-10-12 22:18:39] 2025-10-13 02:17:30,696 | INFO     | mean x: 1760314261.9314516
[2025-10-12 22:18:39] 2025-10-13 02:17:30,696 | INFO     | mean y: 2492338.0322580645
[2025-10-12 22:18:39] 2025-10-13 02:17:30,696 | INFO     | -- intersect: -5360493858.007588
[2025-10-12 22:18:39] 2025-10-13 02:17:30,696 | INFO     | intersect: -5360493858.007588
[2025-10-12 22:18:39] 2025-10-13 02:17:30,697 | INFO     | chi2: 0.9331950420376811
[2025-10-12 22:18:39] 2025-10-13 02:17:30,697 | INFO     | current chi2=0.9331950420376811 (change=72.76539941206013 %)
[2025-10-12 22:18:39] 2025-10-13 02:17:30,701 | INFO     | sum of square deviations: 4449237397.761345
[2025-10-12 22:18:39] 2025-10-13 02:17:30,703 | INFO     | sum of deviations: -1981863054.0246983
[2025-10-12 22:18:39] 2025-10-13 02:17:30,704 | INFO     | mean x: 1760314414.436214
[2025-10-12 22:18:39] 2025-10-13 02:17:30,704 | INFO     | mean y: 2501217.3209876544
[2025-10-12 22:18:39] 2025-10-13 02:17:30,704 | INFO     | -- intersect: 786613591.9930182
[2025-10-12 22:18:39] 2025-10-13 02:17:30,704 | INFO     | intersect: 786613591.9930182
[2025-10-12 22:18:39] 2025-10-13 02:17:30,704 | INFO     | chi2: 0.7710830190011173
[2025-10-12 22:18:39] 2025-10-13 02:17:30,704 | INFO     | current chi2=0.7710830190011173 (change=17.371719279882107 %)
[2025-10-12 22:18:39] 2025-10-13 02:17:30,705 | INFO     | left removable region: 20
[2025-10-12 22:18:39] 2025-10-13 02:17:30,709 | INFO     | sum of square deviations: 3626959221.691637
[2025-10-12 22:18:39] 2025-10-13 02:17:30,711 | INFO     | sum of deviations: 1619540642.3215857
[2025-10-12 22:18:39] 2025-10-13 02:17:30,711 | INFO     | mean x: 1760314536.431718
[2025-10-12 22:18:39] 2025-10-13 02:17:30,711 | INFO     | mean y: 2515942.1497797356
[2025-10-12 22:18:39] 2025-10-13 02:17:30,711 | INFO     | -- intersect: -783514658.3516978
[2025-10-12 22:18:39] 2025-10-13 02:17:30,712 | INFO     | intersect: -783514658.3516978
[2025-10-12 22:18:39] 2025-10-13 02:17:30,712 | INFO     | chi2: 0.004029132597156985
[2025-10-12 22:18:39] 2025-10-13 02:17:30,712 | INFO     | -- intersect: -783514658.3516978
[2025-10-12 22:18:39] 2025-10-13 02:17:30,712 | INFO     | current memory leak: 0.45 B/s (using 227 data points, chi2=0.00)
[2025-10-12 22:18:39] 2025-10-13 02:17:30,717 | INFO     | could have reported an average CPU frequency of 2538 MHz (12 samples)
[2025-10-12 22:18:39] 2025-10-13 02:17:30,717 | INFO     | ..............................
[2025-10-12 22:18:39] 2025-10-13 02:17:30,718 | INFO     | . Timing measurements:
[2025-10-12 22:18:39] 2025-10-13 02:17:30,718 | INFO     | . get job = 0 s
[2025-10-12 22:18:39] 2025-10-13 02:17:30,718 | INFO     | . initial setup = 6 s
[2025-10-12 22:18:39] 2025-10-13 02:17:30,718 | INFO     | . payload setup = 42 s
[2025-10-12 22:18:39] 2025-10-13 02:17:30,718 | INFO     | . stage-in = 0 s
[2025-10-12 22:18:39] 2025-10-13 02:17:30,718 | INFO     | . payload execution = 15408 s
[2025-10-12 22:18:39] 2025-10-13 02:17:30,718 | INFO     | . stage-out = 5 s
[2025-10-12 22:18:39] 2025-10-13 02:17:30,718 | INFO     | . log creation = 0 s
[2025-10-12 22:18:39] 2025-10-13 02:17:30,718 | INFO     | ..............................
[2025-10-12 22:18:39] 2025-10-13 02:17:31,143 | INFO     | 
[2025-10-12 22:18:39] 2025-10-13 02:17:31,143 | INFO     | job summary report
[2025-10-12 22:18:39] 2025-10-13 02:17:31,143 | INFO     | --------------------------------------------------
[2025-10-12 22:18:39] 2025-10-13 02:17:31,143 | INFO     | PanDA job id: 6840536117
[2025-10-12 22:18:39] 2025-10-13 02:17:31,143 | INFO     | task id: 46676269
[2025-10-12 22:18:39] 2025-10-13 02:17:31,143 | INFO     | errors: (none)
[2025-10-12 22:18:39] 2025-10-13 02:17:31,143 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:18:39] 2025-10-13 02:17:31,143 | INFO     | pilot state: finished 
[2025-10-12 22:18:39] 2025-10-13 02:17:31,143 | INFO     | transexitcode: 0
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | exeerrorcode: 0
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | exeerrordiag: 
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | exitcode: 0
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | exitmsg: OK
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | cpuconsumptiontime: 47777 s
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | nevents: 400
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | neventsw: 0
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | pid: 1425661
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | pgrp: 1425661
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | corecount: 8
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | event service: False
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | sizes: {0: 2348685, 1: 2348685, 2: 2348912, 13: 2348912, 24: 2348968, 32: 2349258, 35: 2349414, 15456: 2380378, 15462: 2389376, 15466: 2389432, 15499: 2389626}
[2025-10-12 22:18:39] 2025-10-13 02:17:31,144 | INFO     | --------------------------------------------------
[2025-10-12 22:18:39] 2025-10-13 02:17:31,145 | INFO     | 
[2025-10-12 22:18:39] 2025-10-13 02:17:31,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:18:39] 2025-10-13 02:17:31,280 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,280 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,280 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:18:39] 2025-10-13 02:17:31,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,282 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:18:39] 2025-10-13 02:17:31,282 | INFO     | job 6840536117 has completed (purged errors)
[2025-10-12 22:18:39] 2025-10-13 02:17:31,282 | INFO     | overall cleanup function is called
[2025-10-12 22:18:39] 2025-10-13 02:17:32,326 | INFO     | --- collectZombieJob: --- 10, [1425661]
[2025-10-12 22:18:39] 2025-10-13 02:17:32,326 | INFO     | zombie collector waiting for pid 1425661
[2025-10-12 22:18:39] 2025-10-13 02:17:32,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:18:39] 2025-10-13 02:17:32,327 | INFO     | collected zombie processes
[2025-10-12 22:18:39] 2025-10-13 02:17:32,327 | INFO     | will attempt to kill all subprocesses of pid=1425661
[2025-10-12 22:18:39] 2025-10-13 02:17:32,481 | INFO     | PID=1416513 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:18:39] 2025-10-13 02:17:32,481 | INFO     | .. there are 24 such processes running
[2025-10-12 22:18:39] 2025-10-13 02:17:33,144 | INFO     | process IDs to be killed: [1425661] (in reverse order)
[2025-10-12 22:18:39] 2025-10-13 02:17:33,361 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:18:39] 2025-10-13 02:17:33,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:18:39] 2025-10-13 02:17:33,380 | INFO     | did not find any defunct processes belonging to 1425661
[2025-10-12 22:18:39] 2025-10-13 02:17:33,397 | INFO     | did not find any defunct processes belonging to 1425661
[2025-10-12 22:18:39] 2025-10-13 02:17:33,398 | INFO     | ready for new job
[2025-10-12 22:18:39] 2025-10-13 02:17:33,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:18:39] 2025-10-13 02:17:33,400 | INFO     | ***************************************
[2025-10-12 22:18:39] 2025-10-13 02:17:33,401 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:18:39] 2025-10-13 02:17:33,401 | INFO     | ***************************************
[2025-10-12 22:18:39] 2025-10-13 02:17:33,401 | INFO     | 
[2025-10-12 22:18:39] 2025-10-13 02:17:33,406 | INFO     | architecture information:
[2025-10-12 22:18:39] 2025-10-13 02:17:33,407 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:18:39] 2025-10-13 02:17:33,559 | INFO     | cat /etc/os-release:
[2025-10-12 22:18:39] NAME="CentOS Linux"
[2025-10-12 22:18:39] VERSION="7 (Core)"
[2025-10-12 22:18:39] ID="centos"
[2025-10-12 22:18:39] ID_LIKE="rhel fedora"
[2025-10-12 22:18:39] VERSION_ID="7"
[2025-10-12 22:18:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:18:39] ANSI_COLOR="0;31"
[2025-10-12 22:18:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:18:39] HOME_URL="https://www.centos.org/"
[2025-10-12 22:18:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:18:39] 
[2025-10-12 22:18:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:18:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:18:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:18:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:18:39] 
[2025-10-12 22:18:39] 2025-10-13 02:17:33,560 | INFO     | ***************************************
[2025-10-12 22:18:39] 2025-10-13 02:17:34,063 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:18:39] 2025-10-13 02:17:34,191 | INFO     | sufficient remaining disk space (127244697600 B)
[2025-10-12 22:18:39] 2025-10-13 02:17:34,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:18:39] 2025-10-13 02:17:34,191 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:18:39] 2025-10-13 02:17:34,192 | INFO     | update_server=False
[2025-10-12 22:18:39] 2025-10-13 02:17:34,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:18:39] 2025-10-13 02:17:34,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:18:39] 2025-10-13 02:17:34,194 | INFO     | aborting loop
[2025-10-12 22:18:39] 2025-10-13 02:17:34,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:18:39] 2025-10-13 02:17:35,005 | INFO     | all payload control threads have been joined
[2025-10-12 22:18:39] 2025-10-13 02:17:35,178 | INFO     | all data control threads have been joined
[2025-10-12 22:18:39] 2025-10-13 02:17:35,197 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:35,200 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:35,390 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:35,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:18:39] 2025-10-13 02:17:35,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:35,679 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:35,831 | INFO     | all job control threads have been joined
[2025-10-12 22:18:39] 2025-10-13 02:17:35,990 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:36,011 | INFO     | [payload] control thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:36,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:18:39] 2025-10-13 02:17:36,182 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:36,183 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:36,184 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:36,184 | INFO     | [job] validate thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:36,185 | INFO     | [data] control thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:36,793 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:36,837 | INFO     | [job] control thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:37,173 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:17:39,525 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:18:39] 2025-10-13 02:18:06,212 | INFO     | PID=1416513 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:18:39] 2025-10-13 02:18:06,213 | INFO     | .. there are 24 such processes running
[2025-10-12 22:18:39] 2025-10-13 02:18:06,216 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:18:39] 2025-10-13 02:18:06,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:18:39] 2025-10-13 02:18:06,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:18:39] 2025-10-13 02:18:29,897 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:18:39] 2025-10-13 02:18:31,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140085209327424)>', '<ExcThread(monitor, started 140084552644352)>']
[2025-10-12 22:18:39] 2025-10-13 02:18:31,456 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:18:39] 2025-10-13 02:18:31,456 | INFO     | [monitor] control thread has ended
[2025-10-12 22:18:39] 2025-10-13 02:18:36,156 | INFO     | all workflow threads have been joined
[2025-10-12 22:18:39] 2025-10-13 02:18:36,156 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:18:39] 2025-10-13 02:18:36,157 | INFO     | traces error code: 0
[2025-10-12 22:18:39] 2025-10-13 02:18:36,157 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:18:39] 2025-10-13 02:18:37,554 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:18:39] 2025-10-13 02:18:37,570 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:18:39] 2025-10-13 02:18:37,587 [wrapper] pilotpid: 1416513
[2025-10-12 22:18:39] 2025-10-13 02:18:37,612 [wrapper] Pilot exit status: 0
[2025-10-12 22:18:39] 2025-10-13 02:18:37,689 [wrapper] pandaids: 6840536117
[2025-10-12 22:18:39] 2025-10-13 02:18:38,336 [wrapper] cleanup supervisor_pilot 1909796 1416514
[2025-10-12 22:18:39] 2025-10-13 02:18:38,340 [wrapper] Test setup, not cleaning
[2025-10-12 22:18:39] 2025-10-13 02:18:38,344 [wrapper] apfmon messages muted
[2025-10-12 22:18:39] 2025-10-13 02:18:38,463 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:18:39] 2025-10-13 02:18:38,474 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:18:39]  *** Error codes and diagnostics ***
[2025-10-12 22:18:39]     "exeErrorCode": 0,
[2025-10-12 22:18:39]     "exeErrorDiag": "",
[2025-10-12 22:18:39]     "pilotErrorCode": 0,
[2025-10-12 22:18:39]     "pilotErrorDiag": "",
[2025-10-12 22:18:39]  *** Listing of results directory ***
[2025-10-12 22:18:39] total 409544
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:25 queuedata.json
[2025-10-12 22:18:39] -rwx------. 1 boincer umatlas     36292 Oct 12 14:27 runpilot2-wrapper.sh
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas       100 Oct 12 17:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:18:39] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 17:56 run_atlas
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas       105 Oct 12 17:56 job.xml
[2025-10-12 22:18:39] -rw-r--r--. 2 boincer umatlas 219202047 Oct 12 17:56 EVNT.46676267._004406.pool.root.1
[2025-10-12 22:18:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:56 start_atlas.sh
[2025-10-12 22:18:39] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 17:56 shared
[2025-10-12 22:18:39] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 17:56 input.tar.gz
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas         0 Oct 12 17:56 boinc_lockfile
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 17:56 pandaJob.out
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas    975528 Oct 12 17:57 agis_schedconf.cvmfs.json
[2025-10-12 22:18:39] drwx------. 5 boincer umatlas      4096 Oct 12 17:58 pilot3
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas 191381998 Oct 12 22:15 HITS.46676269._086172.pool.root.1
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas       531 Oct 12 22:15 boinc_task_state.xml
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas      1046 Oct 12 22:16 memory_monitor_summary.json
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas   1560580 Oct 12 22:16 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas    485435 Oct 12 22:16 log.46676269._086172.job.log.tgz.1
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas      7833 Oct 12 22:17 heartbeat.json
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas      6858 Oct 12 22:18 init_data.xml
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas        95 Oct 12 22:18 pilot_heartbeat.json
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas      4825 Oct 12 22:18 pilotlog.txt
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:18 boinc_mmap_file
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas   1956613 Oct 12 22:18 log.46676269._086172.job.log.1
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas        28 Oct 12 22:18 wrapper_checkpoint.txt
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas       357 Oct 12 22:18 output.list
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:18 runtime_log
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas   2457600 Oct 12 22:18 result.tar.gz
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 22:18 runtime_log.err
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas       658 Oct 12 22:18 alaNDmVyFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm53kNDmszTYnn.diag
[2025-10-12 22:18:39] -rw-r--r--. 1 boincer umatlas     21349 Oct 12 22:18 stderr.txt
[2025-10-12 22:18:39] HITS file was successfully produced:
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas 191381998 Oct 12 22:15 shared/HITS.pool.root.1
[2025-10-12 22:18:39]  *** Contents of shared directory: ***
[2025-10-12 22:18:39] total 403952
[2025-10-12 22:18:39] -rw-r--r--. 2 boincer umatlas 219202047 Oct 12 17:56 ATLAS.root_0
[2025-10-12 22:18:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:56 start_atlas.sh
[2025-10-12 22:18:39] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 17:56 input.tar.gz
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas 191381998 Oct 12 22:15 HITS.pool.root.1
[2025-10-12 22:18:39] -rw-------. 1 boincer umatlas   2457600 Oct 12 22:18 result.tar.gz
22:18:40 (1410233): run_atlas exited; CPU time 48413.380556
22:18:40 (1410233): called boinc_finish(0)

</stderr_txt>
]]>

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