Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:01:53 (846132): wrapper (7.7.26015): starting
19:01:53 (846132): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:01:54] Arguments: --nthreads 8
[2025-10-12 19:01:54] Threads: 8
[2025-10-12 19:01:54] Checking for CVMFS
[2025-10-12 19:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:01:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:01:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:01:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:01:56] 2.13.2.0 6179 6313 120488 151640 1 387 39879071 40960001 22694 16776704 0 16541170 99.940 2950972 40690 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:01:56] CVMFS is ok
[2025-10-12 19:01:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:01:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:01:56] Further information can be found at the LHC@home message board.
[2025-10-12 19:01:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:01:56] Checking for apptainer binary...
[2025-10-12 19:01:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:01:56] Running /usr/bin/apptainer --version
[2025-10-12 19:01:56] apptainer version 1.4.3-1.el9
[2025-10-12 19:01:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:01:58] c-211-33-2.aglt2.org
[2025-10-12 19:01:58] apptainer works
[2025-10-12 19:01:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:01:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:01:58] Starting ATLAS job with PandaID=6840531293
[2025-10-12 19:01:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:07:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:07:32] 2025-10-13 02:06:44,002 | INFO     | PID=851175 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:07:32] 2025-10-13 02:06:44,003 | INFO     | .. there are 17 such processes running
[2025-10-12 22:07:32] 2025-10-13 02:06:45,004 | INFO     | time since job start (11018s) is within the limit (172800.0s)
[2025-10-12 22:07:32] 2025-10-13 02:06:45,182 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 22:07:32] 2025-10-13 02:06:45,196 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2572.5445729166677
[2025-10-12 22:07:32] 2025-10-13 02:06:45,215 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840531293/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:07:32] 2025-10-13 02:06:45,216 | INFO     | extracted standard info from prmon json
[2025-10-12 22:07:32] 2025-10-13 02:06:45,216 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:07:32] 2025-10-13 02:06:45,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:07:32] 2025-10-13 02:06:45,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:07:32] 2025-10-13 02:06:45,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:07:32] 2025-10-13 02:06:45,222 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:07:32] 2025-10-13 02:06:45,222 | INFO     | sum of square deviations: 1748617647.5561793
[2025-10-12 22:07:32] 2025-10-13 02:06:45,224 | INFO     | sum of deviations: 31475739157.713448
[2025-10-12 22:07:32] 2025-10-13 02:06:45,224 | INFO     | mean x: 1760315750.7696629
[2025-10-12 22:07:32] 2025-10-13 02:06:45,224 | INFO     | mean y: 2462788.724719101
[2025-10-12 22:07:32] 2025-10-13 02:06:45,224 | INFO     | -- intersect: -31683846384.624916
[2025-10-12 22:07:32] 2025-10-13 02:06:45,224 | INFO     | intersect: -31683846384.624916
[2025-10-12 22:07:32] 2025-10-13 02:06:45,225 | INFO     | chi2: 3.611393854270148
[2025-10-12 22:07:32] 2025-10-13 02:06:45,225 | INFO     | sum of square deviations: 1605343133.7687926
[2025-10-12 22:07:32] 2025-10-13 02:06:45,226 | INFO     | sum of deviations: 41482349450.653175
[2025-10-12 22:07:32] 2025-10-13 02:06:45,226 | INFO     | mean x: 1760315598.2658958
[2025-10-12 22:07:32] 2025-10-13 02:06:45,227 | INFO     | mean y: 2473168.3988439306
[2025-10-12 22:07:32] 2025-10-13 02:06:45,227 | INFO     | -- intersect: -45484392072.224785
[2025-10-12 22:07:32] 2025-10-13 02:06:45,227 | INFO     | intersect: -45484392072.224785
[2025-10-12 22:07:32] 2025-10-13 02:06:45,227 | INFO     | chi2: 2.9415504779165125
[2025-10-12 22:07:32] 2025-10-13 02:06:45,227 | INFO     | current chi2=2.9415504779165125 (change=18.548056605944712 %)
[2025-10-12 22:07:32] 2025-10-13 02:06:45,227 | INFO     | right removable region: 172
[2025-10-12 22:07:32] 2025-10-13 02:06:45,228 | INFO     | sum of square deviations: 1605345818.2312055
[2025-10-12 22:07:32] 2025-10-13 02:06:45,229 | INFO     | sum of deviations: -14414931292.167633
[2025-10-12 22:07:32] 2025-10-13 02:06:45,229 | INFO     | mean x: 1760315903.2716763
[2025-10-12 22:07:32] 2025-10-13 02:06:45,229 | INFO     | mean y: 2511407.578034682
[2025-10-12 22:07:32] 2025-10-13 02:06:45,229 | INFO     | -- intersect: 15808970371.12372
[2025-10-12 22:07:32] 2025-10-13 02:06:45,229 | INFO     | intersect: 15808970371.12372
[2025-10-12 22:07:32] 2025-10-13 02:06:45,230 | INFO     | chi2: 0.8842015465174697
[2025-10-12 22:07:32] 2025-10-13 02:06:45,230 | INFO     | current chi2=0.8842015465174697 (change=75.5163357363534 %)
[2025-10-12 22:07:32] 2025-10-13 02:06:45,230 | INFO     | sum of square deviations: 1470131447.9464278
[2025-10-12 22:07:32] 2025-10-13 02:06:45,231 | INFO     | sum of deviations: -18060610879.214287
[2025-10-12 22:07:32] 2025-10-13 02:06:45,232 | INFO     | mean x: 1760316055.767857
[2025-10-12 22:07:32] 2025-10-13 02:06:45,232 | INFO     | mean y: 2515439.404761905
[2025-10-12 22:07:32] 2025-10-13 02:06:45,232 | INFO     | -- intersect: 21628053313.631004
[2025-10-12 22:07:32] 2025-10-13 02:06:45,232 | INFO     | intersect: 21628053313.631004
[2025-10-12 22:07:32] 2025-10-13 02:06:45,232 | INFO     | chi2: 0.8380180321521004
[2025-10-12 22:07:32] 2025-10-13 02:06:45,232 | INFO     | current chi2=0.8380180321521004 (change=5.223188598489621 %)
[2025-10-12 22:07:32] 2025-10-13 02:06:45,232 | INFO     | left removable region: 20
[2025-10-12 22:07:32] 2025-10-13 02:06:45,233 | INFO     | sum of square deviations: 1088778232.9407918
[2025-10-12 22:07:32] 2025-10-13 02:06:45,234 | INFO     | sum of deviations: 3863973532.1250076
[2025-10-12 22:07:32] 2025-10-13 02:06:45,234 | INFO     | mean x: 1760316177.7697368
[2025-10-12 22:07:32] 2025-10-13 02:06:45,234 | INFO     | mean y: 2513610.375
[2025-10-12 22:07:32] 2025-10-13 02:06:45,234 | INFO     | -- intersect: -6244686152.888092
[2025-10-12 22:07:32] 2025-10-13 02:06:45,234 | INFO     | intersect: -6244686152.888092
[2025-10-12 22:07:32] 2025-10-13 02:06:45,234 | INFO     | chi2: 0.0007079933876149683
[2025-10-12 22:07:32] 2025-10-13 02:06:45,235 | INFO     | -- intersect: -6244686152.888092
[2025-10-12 22:07:32] 2025-10-13 02:06:45,235 | INFO     | current memory leak: 3.55 B/s (using 152 data points, chi2=0.00)
[2025-10-12 22:07:32] 2025-10-13 02:06:45,236 | INFO     | could have reported an average CPU frequency of 2547 MHz (9 samples)
[2025-10-12 22:07:32] 2025-10-13 02:06:45,236 | INFO     | ..............................
[2025-10-12 22:07:32] 2025-10-13 02:06:45,236 | INFO     | . Timing measurements:
[2025-10-12 22:07:32] 2025-10-13 02:06:45,236 | INFO     | . get job = 0 s
[2025-10-12 22:07:32] 2025-10-13 02:06:45,236 | INFO     | . initial setup = 4 s
[2025-10-12 22:07:32] 2025-10-13 02:06:45,236 | INFO     | . payload setup = 39 s
[2025-10-12 22:07:32] 2025-10-13 02:06:45,236 | INFO     | . stage-in = 0 s
[2025-10-12 22:07:32] 2025-10-13 02:06:45,236 | INFO     | . payload execution = 10863 s
[2025-10-12 22:07:32] 2025-10-13 02:06:45,236 | INFO     | . stage-out = 3 s
[2025-10-12 22:07:32] 2025-10-13 02:06:45,236 | INFO     | . log creation = 0 s
[2025-10-12 22:07:32] 2025-10-13 02:06:45,237 | INFO     | ..............................
[2025-10-12 22:07:32] 2025-10-13 02:06:45,753 | INFO     | 
[2025-10-12 22:07:32] 2025-10-13 02:06:45,753 | INFO     | job summary report
[2025-10-12 22:07:32] 2025-10-13 02:06:45,753 | INFO     | --------------------------------------------------
[2025-10-12 22:07:32] 2025-10-13 02:06:45,753 | INFO     | PanDA job id: 6840531293
[2025-10-12 22:07:32] 2025-10-13 02:06:45,753 | INFO     | task id: 46676269
[2025-10-12 22:07:32] 2025-10-13 02:06:45,754 | INFO     | errors: (none)
[2025-10-12 22:07:32] 2025-10-13 02:06:45,754 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:07:32] 2025-10-13 02:06:45,754 | INFO     | pilot state: finished 
[2025-10-12 22:07:32] 2025-10-13 02:06:45,754 | INFO     | transexitcode: 0
[2025-10-12 22:07:32] 2025-10-13 02:06:45,754 | INFO     | exeerrorcode: 0
[2025-10-12 22:07:32] 2025-10-13 02:06:45,754 | INFO     | exeerrordiag: 
[2025-10-12 22:07:32] 2025-10-13 02:06:45,754 | INFO     | exitcode: 0
[2025-10-12 22:07:32] 2025-10-13 02:06:45,754 | INFO     | exitmsg: OK
[2025-10-12 22:07:32] 2025-10-13 02:06:45,754 | INFO     | cpuconsumptiontime: 50501 s
[2025-10-12 22:07:32] 2025-10-13 02:06:45,754 | INFO     | nevents: 400
[2025-10-12 22:07:32] 2025-10-13 02:06:45,754 | INFO     | neventsw: 0
[2025-10-12 22:07:32] 2025-10-13 02:06:45,755 | INFO     | pid: 858404
[2025-10-12 22:07:32] 2025-10-13 02:06:45,755 | INFO     | pgrp: 858404
[2025-10-12 22:07:32] 2025-10-13 02:06:45,755 | INFO     | corecount: 8
[2025-10-12 22:07:32] 2025-10-13 02:06:45,755 | INFO     | event service: False
[2025-10-12 22:07:32] 2025-10-13 02:06:45,755 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348941, 4: 2348941, 15: 2348969, 26: 2349125, 37: 2349153, 40: 2349443, 48: 2349471, 10907: 2378365, 10908: 2378644
[2025-10-12 22:07:32] 2025-10-13 02:06:45,755 | INFO     | --------------------------------------------------
[2025-10-12 22:07:32] 2025-10-13 02:06:45,755 | INFO     | 
[2025-10-12 22:07:32] 2025-10-13 02:06:45,755 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:07:32] 2025-10-13 02:06:45,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,854 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,854 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,854 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,855 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,855 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,855 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,855 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,855 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,855 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,855 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,855 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:07:32] 2025-10-13 02:06:45,855 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,855 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:07:32] 2025-10-13 02:06:45,856 | INFO     | job 6840531293 has completed (purged errors)
[2025-10-12 22:07:32] 2025-10-13 02:06:45,860 | INFO     | overall cleanup function is called
[2025-10-12 22:07:32] 2025-10-13 02:06:46,878 | INFO     | --- collectZombieJob: --- 10, [858404]
[2025-10-12 22:07:32] 2025-10-13 02:06:46,878 | INFO     | zombie collector waiting for pid 858404
[2025-10-12 22:07:32] 2025-10-13 02:06:46,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:07:32] 2025-10-13 02:06:46,879 | INFO     | collected zombie processes
[2025-10-12 22:07:32] 2025-10-13 02:06:46,879 | INFO     | will attempt to kill all subprocesses of pid=858404
[2025-10-12 22:07:32] 2025-10-13 02:06:47,461 | INFO     | process IDs to be killed: [858404] (in reverse order)
[2025-10-12 22:07:32] 2025-10-13 02:06:47,588 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:07:32] 2025-10-13 02:06:47,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:07:32] 2025-10-13 02:06:47,610 | INFO     | did not find any defunct processes belonging to 858404
[2025-10-12 22:07:32] 2025-10-13 02:06:47,625 | INFO     | did not find any defunct processes belonging to 858404
[2025-10-12 22:07:32] 2025-10-13 02:06:47,625 | INFO     | ready for new job
[2025-10-12 22:07:32] 2025-10-13 02:06:47,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:07:32] 2025-10-13 02:06:47,628 | INFO     | ***************************************
[2025-10-12 22:07:32] 2025-10-13 02:06:47,628 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:07:32] 2025-10-13 02:06:47,628 | INFO     | ***************************************
[2025-10-12 22:07:32] 2025-10-13 02:06:47,628 | INFO     | 
[2025-10-12 22:07:32] 2025-10-13 02:06:47,635 | INFO     | architecture information:
[2025-10-12 22:07:32] 2025-10-13 02:06:47,635 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:07:32] 2025-10-13 02:06:47,664 | INFO     | cat /etc/os-release:
[2025-10-12 22:07:32] NAME="CentOS Linux"
[2025-10-12 22:07:32] VERSION="7 (Core)"
[2025-10-12 22:07:32] ID="centos"
[2025-10-12 22:07:32] ID_LIKE="rhel fedora"
[2025-10-12 22:07:32] VERSION_ID="7"
[2025-10-12 22:07:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:07:32] ANSI_COLOR="0;31"
[2025-10-12 22:07:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:07:32] HOME_URL="https://www.centos.org/"
[2025-10-12 22:07:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:07:32] 
[2025-10-12 22:07:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:07:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:07:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:07:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:07:32] 
[2025-10-12 22:07:32] 2025-10-13 02:06:47,682 | INFO     | ***************************************
[2025-10-12 22:07:32] 2025-10-13 02:06:48,188 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:07:32] 2025-10-13 02:06:48,309 | INFO     | sufficient remaining disk space (127298174976 B)
[2025-10-12 22:07:32] 2025-10-13 02:06:48,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:07:32] 2025-10-13 02:06:48,310 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:07:32] 2025-10-13 02:06:48,310 | INFO     | update_server=False
[2025-10-12 22:07:32] 2025-10-13 02:06:48,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:07:32] 2025-10-13 02:06:48,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:07:32] 2025-10-13 02:06:48,312 | INFO     | aborting loop
[2025-10-12 22:07:32] 2025-10-13 02:06:48,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:07:32] 2025-10-13 02:06:48,741 | INFO     | all payload control threads have been joined
[2025-10-12 22:07:32] 2025-10-13 02:06:48,973 | INFO     | all data control threads have been joined
[2025-10-12 22:07:32] 2025-10-13 02:06:49,328 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:49,328 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:49,366 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:49,649 | INFO     | all job control threads have been joined
[2025-10-12 22:07:32] 2025-10-13 02:06:49,747 | INFO     | [payload] control thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:49,979 | INFO     | [data] control thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:50,120 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:50,192 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:50,199 | INFO     | [job] validate thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:50,241 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:50,374 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:50,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:07:32] 2025-10-13 02:06:50,590 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:50,644 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:50,655 | INFO     | [job] control thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:50,818 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:51,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:07:32] 2025-10-13 02:06:51,387 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:06:55,198 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:07:32] 2025-10-13 02:07:19,555 | INFO     | PID=851175 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 22:07:32] 2025-10-13 02:07:19,555 | INFO     | .. there are 17 such processes running
[2025-10-12 22:07:32] 2025-10-13 02:07:19,556 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:07:32] 2025-10-13 02:07:19,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:07:32] 2025-10-13 02:07:19,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:07:32] 2025-10-13 02:07:25,647 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:07:32] 2025-10-13 02:07:26,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140423394895680)>', '<ExcThread(monitor, started 140422521276160)>']
[2025-10-12 22:07:32] 2025-10-13 02:07:26,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:07:32] 2025-10-13 02:07:26,605 | INFO     | [monitor] control thread has ended
[2025-10-12 22:07:32] 2025-10-13 02:07:31,496 | INFO     | all workflow threads have been joined
[2025-10-12 22:07:32] 2025-10-13 02:07:31,508 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:07:32] 2025-10-13 02:07:31,508 | INFO     | traces error code: 0
[2025-10-12 22:07:32] 2025-10-13 02:07:31,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:07:32] 2025-10-13 02:07:31,747 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:07:32] 2025-10-13 02:07:31,751 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:07:32] 2025-10-13 02:07:31,760 [wrapper] pilotpid: 851175
[2025-10-12 22:07:32] 2025-10-13 02:07:31,764 [wrapper] Pilot exit status: 0
[2025-10-12 22:07:32] 2025-10-13 02:07:31,841 [wrapper] pandaids: 6840531293
[2025-10-12 22:07:32] 2025-10-13 02:07:32,197 [wrapper] cleanup supervisor_pilot 1185957 851176
[2025-10-12 22:07:32] 2025-10-13 02:07:32,249 [wrapper] Test setup, not cleaning
[2025-10-12 22:07:32] 2025-10-13 02:07:32,275 [wrapper] apfmon messages muted
[2025-10-12 22:07:32] 2025-10-13 02:07:32,306 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:07:32] 2025-10-13 02:07:32,337 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:07:32]  *** Error codes and diagnostics ***
[2025-10-12 22:07:32]     "exeErrorCode": 0,
[2025-10-12 22:07:32]     "exeErrorDiag": "",
[2025-10-12 22:07:32]     "pilotErrorCode": 0,
[2025-10-12 22:07:32]     "pilotErrorDiag": "",
[2025-10-12 22:07:32]  *** Listing of results directory ***
[2025-10-12 22:07:32] total 407268
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:13 queuedata.json
[2025-10-12 22:07:32] -rwx------. 1 boincer umatlas     36292 Oct 12 14:13 runpilot2-wrapper.sh
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:07:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:01 run_atlas
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:01 job.xml
[2025-10-12 22:07:32] -rw-r--r--. 2 boincer umatlas 218745124 Oct 12 19:01 EVNT.46676267._004389.pool.root.1
[2025-10-12 22:07:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:01 start_atlas.sh
[2025-10-12 22:07:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:01 shared
[2025-10-12 22:07:32] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 19:01 input.tar.gz
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:01 boinc_lockfile
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 19:01 pandaJob.out
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas    975603 Oct 12 19:03 agis_schedconf.cvmfs.json
[2025-10-12 22:07:32] drwx------. 5 boincer umatlas      4096 Oct 12 19:03 pilot3
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas      6859 Oct 12 22:04 init_data.xml
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas 190799636 Oct 12 22:05 HITS.46676269._085735.pool.root.1
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas       529 Oct 12 22:05 boinc_task_state.xml
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas      1054 Oct 12 22:06 memory_monitor_summary.json
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas   1560580 Oct 12 22:06 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas    412156 Oct 12 22:06 log.46676269._085735.job.log.tgz.1
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas      7845 Oct 12 22:06 heartbeat.json
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas        95 Oct 12 22:07 pilot_heartbeat.json
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas      4824 Oct 12 22:07 pilotlog.txt
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas        27 Oct 12 22:07 wrapper_checkpoint.txt
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:07 boinc_mmap_file
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas   1384667 Oct 12 22:07 log.46676269._085735.job.log.1
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas       357 Oct 12 22:07 output.list
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:07 runtime_log
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas   1812480 Oct 12 22:07 result.tar.gz
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas       658 Oct 12 22:07 UvLODmSkFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmffUMDmaLge6n.diag
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 22:07 runtime_log.err
[2025-10-12 22:07:32] -rw-r--r--. 1 boincer umatlas     21305 Oct 12 22:07 stderr.txt
[2025-10-12 22:07:32] HITS file was successfully produced:
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas 190799636 Oct 12 22:05 shared/HITS.pool.root.1
[2025-10-12 22:07:32]  *** Contents of shared directory: ***
[2025-10-12 22:07:32] total 402304
[2025-10-12 22:07:32] -rw-r--r--. 2 boincer umatlas 218745124 Oct 12 19:01 ATLAS.root_0
[2025-10-12 22:07:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:01 start_atlas.sh
[2025-10-12 22:07:32] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 19:01 input.tar.gz
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas 190799636 Oct 12 22:05 HITS.pool.root.1
[2025-10-12 22:07:32] -rw-------. 1 boincer umatlas   1812480 Oct 12 22:07 result.tar.gz
22:07:33 (846132): run_atlas exited; CPU time 50900.188793
22:07:33 (846132): called boinc_finish(0)

</stderr_txt>
]]>

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