Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:16:03 (15398): wrapper (7.7.26015): starting
08:16:03 (15398): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 08:16:03] Arguments: --nthreads 8
[2025-10-13 08:16:03] Threads: 8
[2025-10-13 08:16:03] Checking for CVMFS
[2025-10-13 08:16:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:16:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:16:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:16:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:16:05] 2.11.2.0 20636 221657 141124 151650 1 61 19433883 25165825 4632 130560 0 105753310 99.892 59557468 3080 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 08:16:05] CVMFS is ok
[2025-10-13 08:16:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:16:05] Checking for apptainer binary...
[2025-10-13 08:16:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:16:05] Running /usr/bin/apptainer --version
[2025-10-13 08:16:06] apptainer version 1.3.2-1.el7
[2025-10-13 08:16:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:16:10] cg-vwn312.simple-grid.lan
[2025-10-13 08:16:10] apptainer works
[2025-10-13 08:16:10] Set ATHENA_PROC_NUMBER=8
[2025-10-13 08:16:10] Set ATHENA_CORE_NUMBER=8
[2025-10-13 08:16:10] Starting ATLAS job with PandaID=6840430150
[2025-10-13 08:16:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:35:34]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:35:34] 2025-10-13 10:34:50,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:35:34] 2025-10-13 10:34:50,597 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:35:34] 2025-10-13 10:34:50,597 | INFO     | sum of square deviations: 4340323240.0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,602 | INFO     | sum of deviations: 103454665076.0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,603 | INFO     | mean x: 1760344207.0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,603 | INFO     | mean y: 2424119.784232365
[2025-10-13 12:35:34] 2025-10-13 10:34:50,603 | INFO     | -- intersect: -41956621389.84509
[2025-10-13 12:35:34] 2025-10-13 10:34:50,603 | INFO     | intersect: -41956621389.84509
[2025-10-13 12:35:34] 2025-10-13 10:34:50,604 | INFO     | chi2: 6.4991087430215035
[2025-10-13 12:35:34] 2025-10-13 10:34:50,604 | INFO     | sum of square deviations: 4075741535.0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,607 | INFO     | sum of deviations: 117071532297.50002
[2025-10-13 12:35:34] 2025-10-13 10:34:50,607 | INFO     | mean x: 1760344054.5
[2025-10-13 12:35:34] 2025-10-13 10:34:50,608 | INFO     | mean y: 2431813.4872881356
[2025-10-13 12:35:34] 2025-10-13 10:34:50,608 | INFO     | -- intersect: -50561661630.94868
[2025-10-13 12:35:34] 2025-10-13 10:34:50,608 | INFO     | intersect: -50561661630.94868
[2025-10-13 12:35:34] 2025-10-13 10:34:50,609 | INFO     | chi2: 5.771572544456914
[2025-10-13 12:35:34] 2025-10-13 10:34:50,609 | INFO     | current chi2=5.771572544456914 (change=11.194399529716904 %)
[2025-10-13 12:35:34] 2025-10-13 10:34:50,609 | INFO     | right removable region: 235
[2025-10-13 12:35:34] 2025-10-13 10:34:50,609 | INFO     | sum of square deviations: 4075741535.0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,611 | INFO     | sum of deviations: 21337324261.000004
[2025-10-13 12:35:34] 2025-10-13 10:34:50,612 | INFO     | mean x: 1760344359.5
[2025-10-13 12:35:34] 2025-10-13 10:34:50,612 | INFO     | mean y: 2471406.593220339
[2025-10-13 12:35:34] 2025-10-13 10:34:50,612 | INFO     | -- intersect: -9213284324.510534
[2025-10-13 12:35:34] 2025-10-13 10:34:50,617 | INFO     | intersect: -9213284324.510534
[2025-10-13 12:35:34] 2025-10-13 10:34:50,618 | INFO     | chi2: 1.8434156687445675
[2025-10-13 12:35:34] 2025-10-13 10:34:50,618 | INFO     | current chi2=1.8434156687445675 (change=71.63586975331107 %)
[2025-10-13 12:35:34] 2025-10-13 10:34:50,618 | INFO     | sum of square deviations: 3822136780.0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,620 | INFO     | sum of deviations: -10472157859.0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,620 | INFO     | mean x: 1760344512.0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,621 | INFO     | mean y: 2490375.1515151514
[2025-10-13 12:35:34] 2025-10-13 10:34:50,621 | INFO     | -- intersect: 4825605474.62954
[2025-10-13 12:35:34] 2025-10-13 10:34:50,621 | INFO     | intersect: 4825605474.62954
[2025-10-13 12:35:34] 2025-10-13 10:34:50,621 | INFO     | chi2: 0.8479201163799787
[2025-10-13 12:35:34] 2025-10-13 10:34:50,621 | INFO     | current chi2=0.8479201163799787 (change=54.002771553013716 %)
[2025-10-13 12:35:34] 2025-10-13 10:34:50,622 | INFO     | sum of square deviations: 3579276412.5
[2025-10-13 12:35:34] 2025-10-13 10:34:50,623 | INFO     | sum of deviations: -16626740933.5
[2025-10-13 12:35:34] 2025-10-13 10:34:50,624 | INFO     | mean x: 1760344664.5
[2025-10-13 12:35:34] 2025-10-13 10:34:50,624 | INFO     | mean y: 2494199.889380531
[2025-10-13 12:35:34] 2025-10-13 10:34:50,624 | INFO     | -- intersect: 8179787964.655438
[2025-10-13 12:35:34] 2025-10-13 10:34:50,624 | INFO     | intersect: 8179787964.655438
[2025-10-13 12:35:34] 2025-10-13 10:34:50,624 | INFO     | chi2: 0.7988868767093713
[2025-10-13 12:35:34] 2025-10-13 10:34:50,625 | INFO     | current chi2=0.7988868767093713 (change=5.782766409640655 %)
[2025-10-13 12:35:34] 2025-10-13 10:34:50,625 | INFO     | left removable region: 30
[2025-10-13 12:35:34] 2025-10-13 10:34:50,625 | INFO     | sum of square deviations: 2671343110.0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,627 | INFO     | sum of deviations: -592206300.0000005
[2025-10-13 12:35:34] 2025-10-13 10:34:50,627 | INFO     | mean x: 1760344939.0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,635 | INFO     | mean y: 2503345.931707317
[2025-10-13 12:35:34] 2025-10-13 10:34:50,635 | INFO     | -- intersect: 392751741.6343906
[2025-10-13 12:35:34] 2025-10-13 10:34:50,635 | INFO     | intersect: 392751741.6343906
[2025-10-13 12:35:34] 2025-10-13 10:34:50,636 | INFO     | chi2: 0.004021478197830047
[2025-10-13 12:35:34] 2025-10-13 10:34:50,636 | INFO     | -- intersect: 392751741.6343906
[2025-10-13 12:35:34] 2025-10-13 10:34:50,636 | INFO     | current memory leak: -0.22 B/s (using 205 data points, chi2=0.00)
[2025-10-13 12:35:34] 2025-10-13 10:34:50,637 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 12:35:34] 2025-10-13 10:34:50,637 | INFO     | ..............................
[2025-10-13 12:35:34] 2025-10-13 10:34:50,637 | INFO     | . Timing measurements:
[2025-10-13 12:35:34] 2025-10-13 10:34:50,637 | INFO     | . get job = 0 s
[2025-10-13 12:35:34] 2025-10-13 10:34:50,637 | INFO     | . initial setup = 9 s
[2025-10-13 12:35:34] 2025-10-13 10:34:50,637 | INFO     | . payload setup = 140 s
[2025-10-13 12:35:34] 2025-10-13 10:34:50,638 | INFO     | . stage-in = 0 s
[2025-10-13 12:35:34] 2025-10-13 10:34:50,638 | INFO     | . payload execution = 14838 s
[2025-10-13 12:35:34] 2025-10-13 10:34:50,638 | INFO     | . stage-out = 4 s
[2025-10-13 12:35:34] 2025-10-13 10:34:50,638 | INFO     | . log creation = 1 s
[2025-10-13 12:35:34] 2025-10-13 10:34:50,638 | INFO     | ..............................
[2025-10-13 12:35:34] 2025-10-13 10:34:50,816 | INFO     | 
[2025-10-13 12:35:34] 2025-10-13 10:34:50,816 | INFO     | job summary report
[2025-10-13 12:35:34] 2025-10-13 10:34:50,816 | INFO     | --------------------------------------------------
[2025-10-13 12:35:34] 2025-10-13 10:34:50,817 | INFO     | PanDA job id: 6840430150
[2025-10-13 12:35:34] 2025-10-13 10:34:50,817 | INFO     | task id: 46676269
[2025-10-13 12:35:34] 2025-10-13 10:34:50,817 | INFO     | errors: (none)
[2025-10-13 12:35:34] 2025-10-13 10:34:50,817 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:35:34] 2025-10-13 10:34:50,817 | INFO     | pilot state: finished 
[2025-10-13 12:35:34] 2025-10-13 10:34:50,817 | INFO     | transexitcode: 0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,817 | INFO     | exeerrorcode: 0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,817 | INFO     | exeerrordiag: 
[2025-10-13 12:35:34] 2025-10-13 10:34:50,817 | INFO     | exitcode: 0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,818 | INFO     | exitmsg: OK
[2025-10-13 12:35:34] 2025-10-13 10:34:50,818 | INFO     | cpuconsumptiontime: 55427 s
[2025-10-13 12:35:34] 2025-10-13 10:34:50,818 | INFO     | nevents: 400
[2025-10-13 12:35:34] 2025-10-13 10:34:50,818 | INFO     | neventsw: 0
[2025-10-13 12:35:34] 2025-10-13 10:34:50,818 | INFO     | pid: 25761
[2025-10-13 12:35:34] 2025-10-13 10:34:50,818 | INFO     | pgrp: 25761
[2025-10-13 12:35:34] 2025-10-13 10:34:50,818 | INFO     | corecount: 8
[2025-10-13 12:35:34] 2025-10-13 10:34:50,818 | INFO     | event service: False
[2025-10-13 12:35:34] 2025-10-13 10:34:50,818 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 34: 2348969, 45: 2349125, 55: 2349153, 66: 2349181, 77: 2349209, 88: 2349265, 98: 2349573, 10
[2025-10-13 12:35:34] 2025-10-13 10:34:50,819 | INFO     | --------------------------------------------------
[2025-10-13 12:35:34] 2025-10-13 10:34:50,819 | INFO     | 
[2025-10-13 12:35:34] 2025-10-13 10:34:50,819 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-10-13 12:35:34] 2025-10-13 10:34:51,360 | INFO     | time since job start (15293s) is within the limit (172800.0s)
[2025-10-13 12:35:34] 2025-10-13 10:34:51,428 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,429 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,429 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,429 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,429 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,429 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:35:34] 2025-10-13 10:34:51,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,431 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:35:34] 2025-10-13 10:34:51,431 | INFO     | job 6840430150 has completed (purged errors)
[2025-10-13 12:35:34] 2025-10-13 10:34:51,431 | INFO     | overall cleanup function is called
[2025-10-13 12:35:34] 2025-10-13 10:34:52,444 | INFO     | --- collectZombieJob: --- 10, [25761]
[2025-10-13 12:35:34] 2025-10-13 10:34:52,444 | INFO     | zombie collector waiting for pid 25761
[2025-10-13 12:35:34] 2025-10-13 10:34:52,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:35:34] 2025-10-13 10:34:52,445 | INFO     | collected zombie processes
[2025-10-13 12:35:34] 2025-10-13 10:34:52,445 | INFO     | will attempt to kill all subprocesses of pid=25761
[2025-10-13 12:35:34] 2025-10-13 10:34:52,575 | INFO     | process IDs to be killed: [25761] (in reverse order)
[2025-10-13 12:35:34] 2025-10-13 10:34:53,499 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:35:34] 2025-10-13 10:34:53,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:35:34] 2025-10-13 10:34:53,502 | INFO     | did not find any defunct processes belonging to 25761
[2025-10-13 12:35:34] 2025-10-13 10:34:53,511 | INFO     | did not find any defunct processes belonging to 25761
[2025-10-13 12:35:34] 2025-10-13 10:34:53,511 | INFO     | ready for new job
[2025-10-13 12:35:34] 2025-10-13 10:34:53,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:35:34] 2025-10-13 10:34:53,514 | INFO     | ***************************************
[2025-10-13 12:35:34] 2025-10-13 10:34:53,514 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:35:34] 2025-10-13 10:34:53,514 | INFO     | ***************************************
[2025-10-13 12:35:34] 2025-10-13 10:34:53,514 | INFO     | 
[2025-10-13 12:35:34] 2025-10-13 10:34:53,515 | INFO     | pilot is running in a VM
[2025-10-13 12:35:34] 2025-10-13 10:34:53,522 | INFO     | architecture information:
[2025-10-13 12:35:34] 2025-10-13 10:34:53,540 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:35:34] 2025-10-13 10:34:53,841 | INFO     | cat /etc/os-release:
[2025-10-13 12:35:34] NAME="CentOS Linux"
[2025-10-13 12:35:34] VERSION="7 (Core)"
[2025-10-13 12:35:34] ID="centos"
[2025-10-13 12:35:34] ID_LIKE="rhel fedora"
[2025-10-13 12:35:34] VERSION_ID="7"
[2025-10-13 12:35:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:35:34] ANSI_COLOR="0;31"
[2025-10-13 12:35:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:35:34] HOME_URL="https://www.centos.org/"
[2025-10-13 12:35:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:35:34] 
[2025-10-13 12:35:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:35:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:35:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:35:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:35:34] 
[2025-10-13 12:35:34] 2025-10-13 10:34:53,842 | INFO     | ***************************************
[2025-10-13 12:35:34] 2025-10-13 10:34:54,345 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-10-13 12:35:34] 2025-10-13 10:34:54,522 | INFO     | sufficient remaining disk space (495825453056 B)
[2025-10-13 12:35:34] 2025-10-13 10:34:54,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:35:34] 2025-10-13 10:34:54,522 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:35:34] 2025-10-13 10:34:54,522 | INFO     | update_server=False
[2025-10-13 12:35:34] 2025-10-13 10:34:54,522 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:35:34] 2025-10-13 10:34:54,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:35:34] 2025-10-13 10:34:54,523 | INFO     | aborting loop
[2025-10-13 12:35:34] 2025-10-13 10:34:54,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:35:34] 2025-10-13 10:34:54,700 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:35:34] 2025-10-13 10:34:55,210 | INFO     | all data control threads have been joined
[2025-10-13 12:35:34] 2025-10-13 10:34:55,317 | INFO     | all job control threads have been joined
[2025-10-13 12:35:34] 2025-10-13 10:34:55,527 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:55,529 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:55,602 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:55,605 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:55,622 | INFO     | all payload control threads have been joined
[2025-10-13 12:35:34] 2025-10-13 10:34:55,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:35:34] 2025-10-13 10:34:56,148 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:56,206 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:56,216 | INFO     | [data] control thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:56,323 | INFO     | [job] control thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:56,530 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:56,628 | INFO     | [payload] control thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:56,830 | INFO     | [job] validate thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:56,837 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:56,906 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:56,940 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:56,998 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:34:58,709 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:35:34] 2025-10-13 10:35:24,208 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:35:34] 2025-10-13 10:35:24,592 | INFO     | PID=19169 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 12:35:34] 2025-10-13 10:35:24,592 | INFO     | .. there are 9 such processes running
[2025-10-13 12:35:34] 2025-10-13 10:35:24,592 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:35:34] 2025-10-13 10:35:24,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:35:34] 2025-10-13 10:35:24,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:35:34] 2025-10-13 10:35:25,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022627776320)>', '<ExcThread(monitor, started 140021956859648)>']
[2025-10-13 12:35:34] 2025-10-13 10:35:26,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:35:34] 2025-10-13 10:35:26,604 | INFO     | [monitor] control thread has ended
[2025-10-13 12:35:34] 2025-10-13 10:35:30,728 | INFO     | all workflow threads have been joined
[2025-10-13 12:35:34] 2025-10-13 10:35:30,728 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:35:34] 2025-10-13 10:35:30,729 | INFO     | traces error code: 0
[2025-10-13 12:35:34] 2025-10-13 10:35:30,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:35:34] 2025-10-13 10:35:31,043 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:35:34] 2025-10-13 10:35:31,127 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:35:34] 2025-10-13 10:35:31,176 [wrapper] pilotpid: 19169
[2025-10-13 12:35:34] 2025-10-13 10:35:31,264 [wrapper] Pilot exit status: 0
[2025-10-13 12:35:34] 2025-10-13 10:35:31,554 [wrapper] pandaids: 6840430150
[2025-10-13 12:35:34] 2025-10-13 10:35:32,303 [wrapper] cleanup supervisor_pilot  5645 19170
[2025-10-13 12:35:34] 2025-10-13 10:35:32,340 [wrapper] Test setup, not cleaning
[2025-10-13 12:35:34] 2025-10-13 10:35:32,369 [wrapper] apfmon messages muted
[2025-10-13 12:35:34] 2025-10-13 10:35:32,399 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:35:34] 2025-10-13 10:35:32,449 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:35:34]  *** Error codes and diagnostics ***
[2025-10-13 12:35:34]     "exeErrorCode": 0,
[2025-10-13 12:35:34]     "exeErrorDiag": "",
[2025-10-13 12:35:34]     "pilotErrorCode": 0,
[2025-10-13 12:35:34]     "pilotErrorDiag": "",
[2025-10-13 12:35:34]  *** Listing of results directory ***
[2025-10-13 12:35:34] total 420248
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc    557409 Oct 12 19:32 pilot3.tar.gz
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc      5112 Oct 12 19:41 queuedata.json
[2025-10-13 12:35:34] -rwx------. 1 boinc boinc     36292 Oct 12 19:43 runpilot2-wrapper.sh
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc       100 Oct 13 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:35:34] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 08:16 run_atlas
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc       105 Oct 13 08:16 job.xml
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc      6388 Oct 13 08:16 init_data.xml
[2025-10-13 12:35:34] -rw-r--r--. 2 boinc boinc 224568807 Oct 13 08:16 EVNT.46676267._002593.pool.root.1
[2025-10-13 12:35:34] -rw-r--r--. 2 boinc boinc     15120 Oct 13 08:16 start_atlas.sh
[2025-10-13 12:35:34] drwxrwx--x. 2 boinc boinc        68 Oct 13 08:16 shared
[2025-10-13 12:35:34] -rw-r--r--. 2 boinc boinc    569682 Oct 13 08:16 input.tar.gz
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc         0 Oct 13 08:16 boinc_lockfile
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc      2550 Oct 13 08:16 pandaJob.out
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc    973230 Oct 13 08:19 agis_schedconf.cvmfs.json
[2025-10-13 12:35:34] drwx------. 5 boinc boinc      4096 Oct 13 08:19 pilot3
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc 196853013 Oct 13 12:31 HITS.46676269._085106.pool.root.1
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc       531 Oct 13 12:32 boinc_task_state.xml
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc      1018 Oct 13 12:32 memory_monitor_summary.json
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc   1560580 Oct 13 12:33 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc    463787 Oct 13 12:33 log.46676269._085106.job.log.tgz.1
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc        95 Oct 13 12:34 pilot_heartbeat.json
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc      7779 Oct 13 12:34 heartbeat.json
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc        28 Oct 13 12:35 wrapper_checkpoint.txt
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc      8192 Oct 13 12:35 boinc_mmap_file
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc      4884 Oct 13 12:35 pilotlog.txt
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc   2048302 Oct 13 12:35 log.46676269._085106.job.log.1
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc       357 Oct 13 12:35 output.list
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc       620 Oct 13 12:35 runtime_log
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc   2529280 Oct 13 12:35 result.tar.gz
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc      8703 Oct 13 12:35 runtime_log.err
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc       657 Oct 13 12:35 7pvMDmBHFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbukNDmZFqUjn.diag
[2025-10-13 12:35:34] -rw-r--r--. 1 boinc boinc     20624 Oct 13 12:35 stderr.txt
[2025-10-13 12:35:34] HITS file was successfully produced:
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc 196853013 Oct 13 12:31 shared/HITS.pool.root.1
[2025-10-13 12:35:34]  *** Contents of shared directory: ***
[2025-10-13 12:35:34] total 414596
[2025-10-13 12:35:34] -rw-r--r--. 2 boinc boinc 224568807 Oct 13 08:16 ATLAS.root_0
[2025-10-13 12:35:34] -rw-r--r--. 2 boinc boinc     15120 Oct 13 08:16 start_atlas.sh
[2025-10-13 12:35:34] -rw-r--r--. 2 boinc boinc    569682 Oct 13 08:16 input.tar.gz
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc 196853013 Oct 13 12:31 HITS.pool.root.1
[2025-10-13 12:35:34] -rw-------. 1 boinc boinc   2529280 Oct 13 12:35 result.tar.gz
12:35:36 (15398): run_atlas exited; CPU time 55642.940358
12:35:36 (15398): called boinc_finish(0)

</stderr_txt>
]]>

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