Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:44:59 (25435): wrapper (7.7.26015): starting
17:44:59 (25435): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 17:44:59] Arguments: --nthreads 12
[2025-10-12 17:44:59] Threads: 12
[2025-10-12 17:44:59] Checking for CVMFS
[2025-10-12 17:44:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:44:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:44:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:44:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:44:59] 2.11.2.0 2937 223438 97804 151638 0 57 20173852 20275200 1 130560 1 109742827 99.984 13760866 13160 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:44:59] CVMFS is ok
[2025-10-12 17:44:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:44:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:44:59] Further information can be found at the LHC@home message board.
[2025-10-12 17:44:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:44:59] Checking for apptainer binary...
[2025-10-12 17:44:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:44:59] Running /usr/bin/apptainer --version
[2025-10-12 17:44:59] apptainer version 1.3.2-1.el7
[2025-10-12 17:44:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:45:01] c-205-8.aglt2.org
[2025-10-12 17:45:01] apptainer works
[2025-10-12 17:45:01] Set ATHENA_PROC_NUMBER=12
[2025-10-12 17:45:01] Set ATHENA_CORE_NUMBER=12
[2025-10-12 17:45:01] Starting ATLAS job with PandaID=6840531282
[2025-10-12 17:45:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:59:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:59:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 18:59:31]  replicas=None
[2025-10-12 18:59:31]  scope=mc23_13p6TeV
[2025-10-12 18:59:31]  status=None
[2025-10-12 18:59:31]  status_code=0
[2025-10-12 18:59:31]  storage_token=
[2025-10-12 18:59:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840531282/log.46676269._085724.job.log.tgz.1
[2025-10-12 18:59:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/36/log.46676269._085724.job.log.tgz.1
[2025-10-12 18:59:31]  workdir=None
[2025-10-12 18:59:31] ]
[2025-10-12 18:59:31] 2025-10-12 22:59:05,735 | INFO     | transferring file log.46676269._085724.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840531282/log.46676269._085724.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 18:59:31] 2025-10-12 22:59:05,735 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840531282/log.46676269._085724.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._085724.job
[2025-10-12 18:59:31] 2025-10-12 22:59:05,759 | INFO     | adding to output.list: log.46676269._085724.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/36/log.46676269._085724.job.log.tg
[2025-10-12 18:59:31] 2025-10-12 22:59:05,760 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 18:59:31] 2025-10-12 22:59:05,760 | INFO     | summary of transferred files:
[2025-10-12 18:59:31] 2025-10-12 22:59:05,760 | INFO     |  -- lfn=log.46676269._085724.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 18:59:31] 2025-10-12 22:59:05,760 | INFO     | stage-out finished correctly
[2025-10-12 18:59:31] 2025-10-12 22:59:06,516 | INFO     | time since job start (4430s) is within the limit (172800.0s)
[2025-10-12 18:59:31] 2025-10-12 22:59:07,623 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 18:59:31] 2025-10-12 22:59:07,733 | INFO     | job 6840531282 has state=finished
[2025-10-12 18:59:31] 2025-10-12 22:59:07,733 | INFO     | preparing for final server update for job 6840531282 in state='finished'
[2025-10-12 18:59:31] 2025-10-12 22:59:07,734 | INFO     | this job has now completed (state=finished)
[2025-10-12 18:59:31] 2025-10-12 22:59:07,734 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 18:59:31] 2025-10-12 22:59:07,734 | INFO     | log transfer has been attempted: DONE
[2025-10-12 18:59:31] 2025-10-12 22:59:07,735 | INFO     | job 6840531282 has finished - writing final server update
[2025-10-12 18:59:31] 2025-10-12 22:59:07,735 | INFO     | total number of processed events: 400 (read)
[2025-10-12 18:59:31] 2025-10-12 22:59:07,736 | INFO     | executing command: lscpu
[2025-10-12 18:59:31] 2025-10-12 22:59:07,762 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 18:59:31] 2025-10-12 22:59:08,522 | INFO     | time since job start (4432s) is within the limit (172800.0s)
[2025-10-12 18:59:31] 2025-10-12 22:59:10,311 | WARNING  | process 3354 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 18:59:31] 2025-10-12 22:59:10,312 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840531282/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:59:31] 2025-10-12 22:59:10,398 | INFO     | number of running child processes to parent process 3354: 1
[2025-10-12 18:59:31] 2025-10-12 22:59:10,398 | INFO     | maximum number of monitored processes: 6
[2025-10-12 18:59:31] 2025-10-12 22:59:10,527 | INFO     | time since job start (4434s) is within the limit (172800.0s)
[2025-10-12 18:59:31] 2025-10-12 22:59:12,453 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 18:59:31] 2025-10-12 22:59:12,457 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 18:59:31] 2025-10-12 22:59:12,459 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840531282/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:59:31] 2025-10-12 22:59:12,460 | INFO     | extracted standard info from prmon json
[2025-10-12 18:59:31] 2025-10-12 22:59:12,460 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:59:31] 2025-10-12 22:59:12,460 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:59:31] 2025-10-12 22:59:12,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:59:31] 2025-10-12 22:59:12,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:59:31] 2025-10-12 22:59:12,463 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:59:31] 2025-10-12 22:59:12,463 | INFO     | sum of square deviations: 89127252.5
[2025-10-12 18:59:31] 2025-10-12 22:59:12,463 | INFO     | sum of deviations: -3276852716.9999995
[2025-10-12 18:59:31] 2025-10-12 22:59:12,463 | INFO     | mean x: 1760307833.5
[2025-10-12 18:59:31] 2025-10-12 22:59:12,463 | INFO     | mean y: 2710707.4545454546
[2025-10-12 18:59:31] 2025-10-12 22:59:12,464 | INFO     | -- intersect: 64722191507.795135
[2025-10-12 18:59:31] 2025-10-12 22:59:12,464 | INFO     | intersect: 64722191507.795135
[2025-10-12 18:59:31] 2025-10-12 22:59:12,464 | INFO     | chi2: 0.0896026385911983
[2025-10-12 18:59:31] 2025-10-12 22:59:12,464 | INFO     | -- intersect: 64722191507.795135
[2025-10-12 18:59:31] 2025-10-12 22:59:12,464 | INFO     | current memory leak: -36.77 B/s (using 66 data points, chi2=0.09)
[2025-10-12 18:59:31] 2025-10-12 22:59:12,465 | INFO     | could have reported an average CPU frequency of 2039 MHz (6 samples)
[2025-10-12 18:59:31] 2025-10-12 22:59:12,465 | INFO     | ..............................
[2025-10-12 18:59:31] 2025-10-12 22:59:12,465 | INFO     | . Timing measurements:
[2025-10-12 18:59:31] 2025-10-12 22:59:12,465 | INFO     | . get job = 0 s
[2025-10-12 18:59:31] 2025-10-12 22:59:12,465 | INFO     | . initial setup = 2 s
[2025-10-12 18:59:31] 2025-10-12 22:59:12,465 | INFO     | . payload setup = 7 s
[2025-10-12 18:59:31] 2025-10-12 22:59:12,465 | INFO     | . stage-in = 0 s
[2025-10-12 18:59:31] 2025-10-12 22:59:12,465 | INFO     | . payload execution = 4401 s
[2025-10-12 18:59:31] 2025-10-12 22:59:12,466 | INFO     | . stage-out = 0 s
[2025-10-12 18:59:31] 2025-10-12 22:59:12,466 | INFO     | . log creation = 0 s
[2025-10-12 18:59:31] 2025-10-12 22:59:12,466 | INFO     | ..............................
[2025-10-12 18:59:31] 2025-10-12 22:59:12,537 | INFO     | time since job start (4436s) is within the limit (172800.0s)
[2025-10-12 18:59:31] 2025-10-12 22:59:12,548 | INFO     | 
[2025-10-12 18:59:31] 2025-10-12 22:59:12,548 | INFO     | job summary report
[2025-10-12 18:59:31] 2025-10-12 22:59:12,548 | INFO     | --------------------------------------------------
[2025-10-12 18:59:31] 2025-10-12 22:59:12,549 | INFO     | PanDA job id: 6840531282
[2025-10-12 18:59:31] 2025-10-12 22:59:12,549 | INFO     | task id: 46676269
[2025-10-12 18:59:31] 2025-10-12 22:59:12,549 | INFO     | errors: (none)
[2025-10-12 18:59:31] 2025-10-12 22:59:12,549 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:59:31] 2025-10-12 22:59:12,549 | INFO     | pilot state: finished 
[2025-10-12 18:59:31] 2025-10-12 22:59:12,549 | INFO     | transexitcode: 0
[2025-10-12 18:59:31] 2025-10-12 22:59:12,550 | INFO     | exeerrorcode: 0
[2025-10-12 18:59:31] 2025-10-12 22:59:12,550 | INFO     | exeerrordiag: 
[2025-10-12 18:59:31] 2025-10-12 22:59:12,550 | INFO     | exitcode: 0
[2025-10-12 18:59:31] 2025-10-12 22:59:12,550 | INFO     | exitmsg: OK
[2025-10-12 18:59:31] 2025-10-12 22:59:12,550 | INFO     | cpuconsumptiontime: 46673 s
[2025-10-12 18:59:31] 2025-10-12 22:59:12,550 | INFO     | nevents: 400
[2025-10-12 18:59:31] 2025-10-12 22:59:12,550 | INFO     | neventsw: 0
[2025-10-12 18:59:31] 2025-10-12 22:59:12,551 | INFO     | pid: 3354
[2025-10-12 18:59:31] 2025-10-12 22:59:12,551 | INFO     | pgrp: 3354
[2025-10-12 18:59:31] 2025-10-12 22:59:12,551 | INFO     | corecount: 12
[2025-10-12 18:59:31] 2025-10-12 22:59:12,551 | INFO     | event service: False
[2025-10-12 18:59:31] 2025-10-12 22:59:12,551 | INFO     | sizes: {0: 2348857, 1: 2348857, 5: 2349147, 11: 2349203, 4412: 2375250, 4413: 2384248, 4415: 2384432, 4420: 2384626}
[2025-10-12 18:59:31] 2025-10-12 22:59:12,551 | INFO     | --------------------------------------------------
[2025-10-12 18:59:31] 2025-10-12 22:59:12,551 | INFO     | 
[2025-10-12 18:59:31] 2025-10-12 22:59:12,552 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:59:31] 2025-10-12 22:59:12,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,579 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:59:31] 2025-10-12 22:59:12,580 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,580 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:59:31] 2025-10-12 22:59:12,580 | INFO     | job 6840531282 has completed (purged errors)
[2025-10-12 18:59:31] 2025-10-12 22:59:12,580 | INFO     | overall cleanup function is called
[2025-10-12 18:59:31] 2025-10-12 22:59:13,587 | INFO     | --- collectZombieJob: --- 10, [3354]
[2025-10-12 18:59:31] 2025-10-12 22:59:13,588 | INFO     | zombie collector waiting for pid 3354
[2025-10-12 18:59:31] 2025-10-12 22:59:13,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:59:31] 2025-10-12 22:59:13,588 | INFO     | collected zombie processes
[2025-10-12 18:59:31] 2025-10-12 22:59:13,588 | INFO     | will attempt to kill all subprocesses of pid=3354
[2025-10-12 18:59:31] 2025-10-12 22:59:13,761 | INFO     | PID=29257 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:59:31] 2025-10-12 22:59:13,783 | INFO     | process IDs to be killed: [3354] (in reverse order)
[2025-10-12 18:59:31] 2025-10-12 22:59:13,836 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:59:31] 2025-10-12 22:59:13,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:59:31] 2025-10-12 22:59:13,839 | INFO     | did not find any defunct processes belonging to 3354
[2025-10-12 18:59:31] 2025-10-12 22:59:13,842 | INFO     | did not find any defunct processes belonging to 3354
[2025-10-12 18:59:31] 2025-10-12 22:59:13,842 | INFO     | ready for new job
[2025-10-12 18:59:31] 2025-10-12 22:59:13,842 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:59:31] 2025-10-12 22:59:13,843 | INFO     | ***************************************
[2025-10-12 18:59:31] 2025-10-12 22:59:13,843 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:59:31] 2025-10-12 22:59:13,843 | INFO     | ***************************************
[2025-10-12 18:59:31] 2025-10-12 22:59:13,844 | INFO     | 
[2025-10-12 18:59:31] 2025-10-12 22:59:13,844 | INFO     | architecture information:
[2025-10-12 18:59:31] 2025-10-12 22:59:13,845 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:59:31] 2025-10-12 22:59:13,860 | INFO     | cat /etc/os-release:
[2025-10-12 18:59:31] NAME="CentOS Linux"
[2025-10-12 18:59:31] VERSION="7 (Core)"
[2025-10-12 18:59:31] ID="centos"
[2025-10-12 18:59:31] ID_LIKE="rhel fedora"
[2025-10-12 18:59:31] VERSION_ID="7"
[2025-10-12 18:59:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:59:31] ANSI_COLOR="0;31"
[2025-10-12 18:59:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:59:31] HOME_URL="https://www.centos.org/"
[2025-10-12 18:59:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:59:31] 
[2025-10-12 18:59:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:59:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:59:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:59:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:59:31] 
[2025-10-12 18:59:31] 2025-10-12 22:59:13,860 | INFO     | ***************************************
[2025-10-12 18:59:31] 2025-10-12 22:59:14,363 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:59:31] 2025-10-12 22:59:14,380 | INFO     | sufficient remaining disk space (29361176576 B)
[2025-10-12 18:59:31] 2025-10-12 22:59:14,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:59:31] 2025-10-12 22:59:14,380 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:59:31] 2025-10-12 22:59:14,381 | INFO     | update_server=False
[2025-10-12 18:59:31] 2025-10-12 22:59:14,381 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:59:31] 2025-10-12 22:59:14,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:59:31] 2025-10-12 22:59:14,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:59:31] 2025-10-12 22:59:14,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:59:31] 2025-10-12 22:59:14,382 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 18:59:31] 2025-10-12 22:59:14,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:59:31] 2025-10-12 22:59:14,383 | INFO     | aborting loop
[2025-10-12 18:59:31] 2025-10-12 22:59:14,383 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:59:31] 2025-10-12 22:59:14,384 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:59:31] 2025-10-12 22:59:14,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:59:31] 2025-10-12 22:59:14,760 | INFO     | all payload control threads have been joined
[2025-10-12 18:59:31] 2025-10-12 22:59:14,816 | INFO     | all data control threads have been joined
[2025-10-12 18:59:31] 2025-10-12 22:59:15,273 | INFO     | all job control threads have been joined
[2025-10-12 18:59:31] 2025-10-12 22:59:15,386 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:15,387 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:15,389 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:15,555 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:15,616 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:15,766 | INFO     | [payload] control thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:15,821 | INFO     | [data] control thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:16,271 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:16,277 | INFO     | [job] control thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:16,280 | INFO     | [job] validate thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:16,388 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:16,666 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:16,734 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:16,753 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:18,389 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:23,165 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:59:31] 2025-10-12 22:59:24,633 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:59:31] 2025-10-12 22:59:25,638 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:59:31] 2025-10-12 22:59:26,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660591339328)>', '<ExcThread(monitor, started 140660162156288)>']
[2025-10-12 18:59:31] 2025-10-12 22:59:26,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:59:31] 2025-10-12 22:59:26,437 | INFO     | [monitor] control thread has ended
[2025-10-12 18:59:31] 2025-10-12 22:59:31,443 | INFO     | all workflow threads have been joined
[2025-10-12 18:59:31] 2025-10-12 22:59:31,444 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:59:31] 2025-10-12 22:59:31,444 | INFO     | traces error code: 0
[2025-10-12 18:59:31] 2025-10-12 22:59:31,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:59:31] 2025-10-12 22:59:31,533 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:59:31] 2025-10-12 22:59:31,536 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:59:31] 2025-10-12 22:59:31,540 [wrapper] pilotpid: 29257
[2025-10-12 18:59:31] 2025-10-12 22:59:31,544 [wrapper] Pilot exit status: 0
[2025-10-12 18:59:31] 2025-10-12 22:59:31,560 [wrapper] pandaids: 6840531282
[2025-10-12 18:59:31] 2025-10-12 22:59:31,596 [wrapper] cleanup supervisor_pilot  9453 29258
[2025-10-12 18:59:31] 2025-10-12 22:59:31,600 [wrapper] Test setup, not cleaning
[2025-10-12 18:59:31] 2025-10-12 22:59:31,604 [wrapper] apfmon messages muted
[2025-10-12 18:59:31] 2025-10-12 22:59:31,609 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:59:31] 2025-10-12 22:59:31,612 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:59:31]  *** Error codes and diagnostics ***
[2025-10-12 18:59:31]     "exeErrorCode": 0,
[2025-10-12 18:59:31]     "exeErrorDiag": "",
[2025-10-12 18:59:31]     "pilotErrorCode": 0,
[2025-10-12 18:59:31]     "pilotErrorDiag": "",
[2025-10-12 18:59:31]  *** Listing of results directory ***
[2025-10-12 18:59:31] total 407744
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:13 queuedata.json
[2025-10-12 18:59:31] -rwx------ 1 boincer umatlas     36292 Oct 12 14:13 runpilot2-wrapper.sh
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas       100 Oct 12 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:59:31] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 17:44 run_atlas
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas       105 Oct 12 17:44 job.xml
[2025-10-12 18:59:31] -rw-r--r-- 2 boincer umatlas 218745124 Oct 12 17:44 EVNT.46676267._004389.pool.root.1
[2025-10-12 18:59:31] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:44 start_atlas.sh
[2025-10-12 18:59:31] drwxrwx--x 2 boincer umatlas      4096 Oct 12 17:44 shared
[2025-10-12 18:59:31] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 17:44 input.tar.gz
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas         0 Oct 12 17:44 boinc_lockfile
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 17:45 pandaJob.out
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas    975528 Oct 12 17:45 agis_schedconf.cvmfs.json
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas   1560580 Oct 12 17:45 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:59:31] drwx------ 5 boincer umatlas      4096 Oct 12 17:45 pilot3
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 18:56 init_data.xml
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas 192854107 Oct 12 18:58 HITS.46676269._085724.pool.root.1
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:58 boinc_mmap_file
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas        27 Oct 12 18:58 wrapper_checkpoint.txt
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas       529 Oct 12 18:59 boinc_task_state.xml
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas      1050 Oct 12 18:59 memory_monitor_summary.json
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas    370765 Oct 12 18:59 log.46676269._085724.job.log.tgz.1
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas      7852 Oct 12 18:59 heartbeat.json
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas        95 Oct 12 18:59 pilot_heartbeat.json
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas      4624 Oct 12 18:59 pilotlog.txt
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas    642490 Oct 12 18:59 log.46676269._085724.job.log.1
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas       357 Oct 12 18:59 output.list
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:59 runtime_log
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas   1034240 Oct 12 18:59 result.tar.gz
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 18:59 runtime_log.err
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas       658 Oct 12 18:59 7U3NDmSkFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUfUMDmgIjJom.diag
[2025-10-12 18:59:31] -rw-r--r-- 1 boincer umatlas     21864 Oct 12 18:59 stderr.txt
[2025-10-12 18:59:31] HITS file was successfully produced:
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas 192854107 Oct 12 18:58 shared/HITS.pool.root.1
[2025-10-12 18:59:31]  *** Contents of shared directory: ***
[2025-10-12 18:59:31] total 403548
[2025-10-12 18:59:31] -rw-r--r-- 2 boincer umatlas 218745124 Oct 12 17:44 ATLAS.root_0
[2025-10-12 18:59:31] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:44 start_atlas.sh
[2025-10-12 18:59:31] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 17:44 input.tar.gz
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas 192854107 Oct 12 18:58 HITS.pool.root.1
[2025-10-12 18:59:31] -rw------- 1 boincer umatlas   1034240 Oct 12 18:59 result.tar.gz
18:59:33 (25435): run_atlas exited; CPU time 46652.684460
18:59:33 (25435): called boinc_finish(0)

</stderr_txt>
]]>

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