Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
09:38:05 (3004058): wrapper (7.7.26015): starting
09:38:05 (3004058): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 09:38:05] Arguments: --nthreads 4
[2025-10-13 09:38:05] Threads: 4
[2025-10-13 09:38:05] Checking for CVMFS
[2025-10-13 09:38:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:38:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:38:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:38:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:38:06] 2.13.1.0 3889163 5364 61344 151653 3 57 2863411 4096000 922 130560 0 9825872 99.996 188169 1655 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 09:38:06] CVMFS is ok
[2025-10-13 09:38:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:38:06] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 09:38:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 09:38:06] Further information can be found at the LHC@home message board.
[2025-10-13 09:38:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:38:06] Checking for apptainer binary...
[2025-10-13 09:38:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:38:06] Running /usr/bin/apptainer --version
[2025-10-13 09:38:06] apptainer version 1.2.3
[2025-10-13 09:38:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:38:06] Ryzen-7-7700-Zen4-Deb12
[2025-10-13 09:38:06] apptainer works
[2025-10-13 09:38:06] Set ATHENA_PROC_NUMBER=4
[2025-10-13 09:38:06] Set ATHENA_CORE_NUMBER=4
[2025-10-13 09:38:06] Starting ATLAS job with PandaID=6840715396
[2025-10-13 09:38:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:25:37]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:25:37]  storage_token=
[2025-10-13 14:25:37]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-6840715396/log.46676269._088348.job.log.tgz.1
[2025-10-13 14:25:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/d6/log.46676269._088348.job.log.tgz.1
[2025-10-13 14:25:37]  workdir=None
[2025-10-13 14:25:37] ]
[2025-10-13 14:25:37] 2025-10-13 08:54:58,969 | INFO     | transferring file log.46676269._088348.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-6840715396/log.46676269._088348.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 14:25:37] 2025-10-13 08:54:58,969 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-6840715396/log.46676269._088348.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.466762
[2025-10-13 14:25:37] 2025-10-13 08:54:58,997 | INFO     | adding to output.list: log.46676269._088348.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/d6/log.46676269._088348.job.log.tg
[2025-10-13 14:25:37] 2025-10-13 08:54:58,997 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 14:25:37] 2025-10-13 08:54:58,997 | INFO     | summary of transferred files:
[2025-10-13 14:25:37] 2025-10-13 08:54:58,997 | INFO     |  -- lfn=log.46676269._088348.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 14:25:37] 2025-10-13 08:54:58,998 | INFO     | stage-out finished correctly
[2025-10-13 14:25:37] 2025-10-13 08:54:59,709 | INFO     | time since job start (4608s) is within the limit (172800.0s)
[2025-10-13 14:25:37] 2025-10-13 08:55:01,634 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 14:25:37] 2025-10-13 08:55:01,673 | INFO     | job 6840715396 has state=finished
[2025-10-13 14:25:37] 2025-10-13 08:55:01,673 | INFO     | preparing for final server update for job 6840715396 in state='finished'
[2025-10-13 14:25:37] 2025-10-13 08:55:01,713 | INFO     | time since job start (4610s) is within the limit (172800.0s)
[2025-10-13 14:25:37] 2025-10-13 08:55:02,070 | WARNING  | process 3014829 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 14:25:37] 2025-10-13 08:55:02,070 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6840715396/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:25:37] 2025-10-13 08:55:02,106 | INFO     | number of running child processes to parent process 3014829: 1
[2025-10-13 14:25:37] 2025-10-13 08:55:02,106 | INFO     | maximum number of monitored processes: 6
[2025-10-13 14:25:37] 2025-10-13 08:55:02,695 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 14:25:37] 2025-10-13 08:55:02,695 | INFO     | this job has now completed (state=finished)
[2025-10-13 14:25:37] 2025-10-13 08:55:02,695 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 14:25:37] 2025-10-13 08:55:02,696 | INFO     | log transfer has been attempted: DONE
[2025-10-13 14:25:37] 2025-10-13 08:55:02,696 | INFO     | job 6840715396 has finished - writing final server update
[2025-10-13 14:25:37] 2025-10-13 08:55:02,696 | INFO     | total number of processed events: 400 (read)
[2025-10-13 14:25:37] 2025-10-13 08:55:02,696 | INFO     | executing command: lscpu
[2025-10-13 14:25:37] 2025-10-13 08:55:02,715 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 14:25:37] 2025-10-13 08:55:03,719 | INFO     | time since job start (4612s) is within the limit (172800.0s)
[2025-10-13 14:25:37] 2025-10-13 08:55:04,608 | INFO     | monitor loop #353: job 0:6840715396 is in state 'finished'
[2025-10-13 14:25:37] 2025-10-13 08:55:04,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:25:37] 2025-10-13 08:55:05,721 | INFO     | time since job start (4614s) is within the limit (172800.0s)
[2025-10-13 14:25:37] 2025-10-13 08:55:07,111 | INFO     | monitor loop #354: job 0:6840715396 is in state 'finished'
[2025-10-13 14:25:37] 2025-10-13 08:55:07,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:25:37] 2025-10-13 08:55:07,729 | INFO     | time since job start (4616s) is within the limit (172800.0s)
[2025-10-13 14:25:37] 2025-10-13 08:55:08,094 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 14:25:37] 2025-10-13 08:55:08,096 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4793.7941875
[2025-10-13 14:25:37] 2025-10-13 08:55:08,097 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6840715396/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:25:37] 2025-10-13 08:55:08,098 | INFO     | extracted standard info from prmon json
[2025-10-13 14:25:37] 2025-10-13 08:55:08,098 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 14:25:37] 2025-10-13 08:55:08,098 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:25:37] 2025-10-13 08:55:08,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:25:37] 2025-10-13 08:55:08,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:25:37] 2025-10-13 08:55:08,099 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:25:37] 2025-10-13 08:55:08,099 | INFO     | sum of square deviations: 101843770.0
[2025-10-13 14:25:37] 2025-10-13 08:55:08,099 | INFO     | sum of deviations: -13738504668.000002
[2025-10-13 14:25:37] 2025-10-13 08:55:08,099 | INFO     | mean x: 1760343488.0
[2025-10-13 14:25:37] 2025-10-13 08:55:08,099 | INFO     | mean y: 2506487.637681159
[2025-10-13 14:25:37] 2025-10-13 08:55:08,099 | INFO     | -- intersect: 237469042017.218
[2025-10-13 14:25:37] 2025-10-13 08:55:08,099 | INFO     | intersect: 237469042017.218
[2025-10-13 14:25:37] 2025-10-13 08:55:08,099 | INFO     | chi2: 0.09293727222278544
[2025-10-13 14:25:37] 2025-10-13 08:55:08,099 | INFO     | -- intersect: 237469042017.218
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | current memory leak: -134.90 B/s (using 69 data points, chi2=0.09)
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | could have reported an average CPU frequency of 4860 MHz (6 samples)
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | ..............................
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | . Timing measurements:
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | . get job = 0 s
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | . initial setup = 1 s
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | . payload setup = 2 s
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | . stage-in = 0 s
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | . payload execution = 4588 s
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | . stage-out = 0 s
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | . log creation = 0 s
[2025-10-13 14:25:37] 2025-10-13 08:55:08,100 | INFO     | ..............................
[2025-10-13 14:25:37] 2025-10-13 08:55:08,452 | INFO     | 
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | job summary report
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | --------------------------------------------------
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | PanDA job id: 6840715396
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | task id: 46676269
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | errors: (none)
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | pilot state: finished 
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | transexitcode: 0
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | exeerrorcode: 0
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | exeerrordiag: 
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | exitcode: 0
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | exitmsg: OK
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | cpuconsumptiontime: 17630 s
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | nevents: 400
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | neventsw: 0
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | pid: 3014829
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | pgrp: 3014829
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | corecount: 4
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | event service: False
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | sizes: {0: 2348864, 2: 2349126, 11: 2349154, 4594: 2375463, 4595: 2384475, 4597: 2384531, 4604: 2384853}
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | --------------------------------------------------
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | 
[2025-10-13 14:25:37] 2025-10-13 08:55:08,453 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-10-13 14:25:37] 2025-10-13 08:55:08,474 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | job 6840715396 has completed (purged errors)
[2025-10-13 14:25:37] 2025-10-13 08:55:08,475 | INFO     | overall cleanup function is called
[2025-10-13 14:25:37] 2025-10-13 08:55:09,480 | INFO     | --- collectZombieJob: --- 10, [3014829]
[2025-10-13 14:25:37] 2025-10-13 08:55:09,481 | INFO     | zombie collector waiting for pid 3014829
[2025-10-13 14:25:37] 2025-10-13 08:55:09,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:25:37] 2025-10-13 08:55:09,481 | INFO     | collected zombie processes
[2025-10-13 14:25:37] 2025-10-13 08:55:09,481 | INFO     | will attempt to kill all subprocesses of pid=3014829
[2025-10-13 14:25:37] 2025-10-13 08:55:09,523 | INFO     | process IDs to be killed: [3014829] (in reverse order)
[2025-10-13 14:25:37] 2025-10-13 08:55:09,552 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:25:37] 2025-10-13 08:55:09,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:25:37] 2025-10-13 08:55:09,554 | INFO     | did not find any defunct processes belonging to 3014829
[2025-10-13 14:25:37] 2025-10-13 08:55:09,556 | INFO     | did not find any defunct processes belonging to 3014829
[2025-10-13 14:25:37] 2025-10-13 08:55:09,556 | INFO     | ready for new job
[2025-10-13 14:25:37] 2025-10-13 08:55:09,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:25:37] 2025-10-13 08:55:09,557 | INFO     | ***************************************
[2025-10-13 14:25:37] 2025-10-13 08:55:09,557 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:25:37] 2025-10-13 08:55:09,557 | INFO     | ***************************************
[2025-10-13 14:25:37] 2025-10-13 08:55:09,557 | INFO     | 
[2025-10-13 14:25:37] 2025-10-13 08:55:09,557 | INFO     | architecture information:
[2025-10-13 14:25:37] 2025-10-13 08:55:09,558 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:25:37] 2025-10-13 08:55:09,568 | INFO     | cat /etc/os-release:
[2025-10-13 14:25:37] NAME="CentOS Linux"
[2025-10-13 14:25:37] VERSION="7 (Core)"
[2025-10-13 14:25:37] ID="centos"
[2025-10-13 14:25:37] ID_LIKE="rhel fedora"
[2025-10-13 14:25:37] VERSION_ID="7"
[2025-10-13 14:25:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:25:37] ANSI_COLOR="0;31"
[2025-10-13 14:25:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:25:37] HOME_URL="https://www.centos.org/"
[2025-10-13 14:25:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:25:37] 
[2025-10-13 14:25:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:25:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:25:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:25:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:25:37] 
[2025-10-13 14:25:37] 2025-10-13 08:55:09,568 | INFO     | ***************************************
[2025-10-13 14:25:37] 2025-10-13 08:55:10,071 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-10-13 14:25:37] 2025-10-13 08:55:10,089 | INFO     | sufficient remaining disk space (883348733952 B)
[2025-10-13 14:25:37] 2025-10-13 08:55:10,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:25:37] 2025-10-13 08:55:10,090 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:25:37] 2025-10-13 08:55:10,090 | INFO     | update_server=False
[2025-10-13 14:25:37] 2025-10-13 08:55:10,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:25:37] 2025-10-13 08:55:10,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:25:37] 2025-10-13 08:55:10,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:25:37] 2025-10-13 08:55:10,376 | INFO     | all payload control threads have been joined
[2025-10-13 14:25:37] 2025-10-13 08:55:10,616 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:25:37] 2025-10-13 08:55:10,617 | INFO     | aborting loop
[2025-10-13 14:25:37] 2025-10-13 08:55:10,900 | INFO     | all job control threads have been joined
[2025-10-13 14:25:37] 2025-10-13 08:55:11,093 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:11,093 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:11,116 | INFO     | all data control threads have been joined
[2025-10-13 14:25:37] 2025-10-13 08:55:11,192 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:11,296 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:11,380 | INFO     | [payload] control thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:11,620 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:11,784 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:11,904 | INFO     | [job] control thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:11,936 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:12,020 | INFO     | [job] validate thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:12,092 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:12,120 | INFO     | [data] control thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:12,132 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:12,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:25:37] 2025-10-13 08:55:12,440 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:12,468 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:16,184 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:25:37] 2025-10-13 08:55:18,508 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:25:37] 2025-10-13 08:55:19,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140649856948032)>', '<ExcThread(monitor, started 140649215018752)>']
[2025-10-13 14:25:37] 2025-10-13 08:55:24,972 | INFO     | all workflow threads have been joined
[2025-10-13 14:25:37] 2025-10-13 08:55:24,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:25:37] 2025-10-13 08:55:24,973 | INFO     | traces error code: 0
[2025-10-13 14:25:37] 2025-10-13 08:55:24,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:25:37] 2025-10-13 08:55:40,823 | INFO     | PID=3008141 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:25:37] 2025-10-13 08:55:40,824 | INFO     | .. there are 3 such processes running
[2025-10-13 14:25:37] 2025-10-13 08:55:40,824 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:25:37] 2025-10-13 08:55:40,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:25:37] 2025-10-13 08:55:40,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:25:37] 2025-10-13 08:55:40,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:25:37] 2025-10-13 08:55:40,824 | INFO     | [monitor] control thread has ended
[2025-10-13 14:25:37] 2025-10-13 08:55:40,930 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:25:37] 2025-10-13 08:55:40,934 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:25:37] 2025-10-13 08:55:40,939 [wrapper] pilotpid: 3008141
[2025-10-13 14:25:37] 2025-10-13 08:55:40,942 [wrapper] Pilot exit status: 0
[2025-10-13 14:25:37] 2025-10-13 08:55:40,964 [wrapper] pandaids: 6840715396
[2025-10-13 14:25:37] 2025-10-13 08:55:40,978 [wrapper] cleanup supervisor_pilot 3072827 3008142
[2025-10-13 14:25:37] 2025-10-13 08:55:40,979 [wrapper] Test setup, not cleaning
[2025-10-13 14:25:37] 2025-10-13 08:55:40,982 [wrapper] apfmon messages muted
[2025-10-13 14:25:37] 2025-10-13 08:55:40,983 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:25:37] 2025-10-13 08:55:40,984 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:25:37]  *** Error codes and diagnostics ***
[2025-10-13 14:25:37]     "exeErrorCode": 0,
[2025-10-13 14:25:37]     "exeErrorDiag": "",
[2025-10-13 14:25:37]     "pilotErrorCode": 0,
[2025-10-13 14:25:37]     "pilotErrorDiag": "",
[2025-10-13 14:25:37]  *** Listing of results directory ***
[2025-10-13 14:25:37] total 414884
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:08 pilot3.tar.gz
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:12 queuedata.json
[2025-10-13 14:25:37] -rwx------ 1 boinc boinc     36292 Oct 12 22:13 runpilot2-wrapper.sh
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:25:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:38 run_atlas
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:38 job.xml
[2025-10-13 14:25:37] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:38 start_atlas.sh
[2025-10-13 14:25:37] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:38 shared
[2025-10-13 14:25:37] -rw-r--r-- 2 boinc boinc    569679 Oct 13 09:38 input.tar.gz
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc      6737 Oct 13 09:38 init_data.xml
[2025-10-13 14:25:37] -rw-r--r-- 2 boinc boinc 222560129 Oct 13 09:38 EVNT.46676267._004488.pool.root.1
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:38 boinc_lockfile
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc      2550 Oct 13 09:38 pandaJob.out
[2025-10-13 14:25:37] -rw------- 1 boinc boinc    972849 Oct 13 09:38 agis_schedconf.cvmfs.json
[2025-10-13 14:25:37] -rw------- 1 boinc boinc   1560580 Oct 13 09:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:25:37] drwx------ 5 boinc boinc      4096 Oct 13 09:38 pilot3
[2025-10-13 14:25:37] -rw------- 1 boinc boinc 196436028 Oct 13 10:54 HITS.46676269._088348.pool.root.1
[2025-10-13 14:25:37] -rw------- 1 boinc boinc      1018 Oct 13 10:54 memory_monitor_summary.json
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc       529 Oct 13 10:54 boinc_task_state.xml
[2025-10-13 14:25:37] -rw------- 1 boinc boinc    270710 Oct 13 10:54 log.46676269._088348.job.log.tgz.1
[2025-10-13 14:25:37] -rw------- 1 boinc boinc      7758 Oct 13 10:55 heartbeat.json
[2025-10-13 14:25:37] -rw------- 1 boinc boinc        95 Oct 13 10:55 pilot_heartbeat.json
[2025-10-13 14:25:37] -rw------- 1 boinc boinc       822 Oct 13 10:55 pilotlog.txt
[2025-10-13 14:25:37] -rw------- 1 boinc boinc    699149 Oct 13 10:55 log.46676269._088348.job.log.1
[2025-10-13 14:25:37] -rw------- 1 boinc boinc       357 Oct 13 10:55 output.list
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:55 runtime_log
[2025-10-13 14:25:37] -rw------- 1 boinc boinc    993280 Oct 13 10:55 result.tar.gz
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc      8826 Oct 13 10:55 runtime_log.err
[2025-10-13 14:25:37] -rw------- 1 boinc boinc       655 Oct 13 10:55 d2KODmxcHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIPlNDmaA8JGn.diag
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc      8192 Oct 13 14:25 boinc_mmap_file
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc        27 Oct 13 14:25 wrapper_checkpoint.txt
[2025-10-13 14:25:37] -rw-r--r-- 1 boinc boinc     22294 Oct 13 14:25 stderr.txt
[2025-10-13 14:25:37] HITS file was successfully produced:
[2025-10-13 14:25:37] -rw------- 1 boinc boinc 196436028 Oct 13 10:54 shared/HITS.pool.root.1
[2025-10-13 14:25:37]  *** Contents of shared directory: ***
[2025-10-13 14:25:37] total 410736
[2025-10-13 14:25:37] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:38 start_atlas.sh
[2025-10-13 14:25:37] -rw-r--r-- 2 boinc boinc    569679 Oct 13 09:38 input.tar.gz
[2025-10-13 14:25:37] -rw-r--r-- 2 boinc boinc 222560129 Oct 13 09:38 ATLAS.root_0
[2025-10-13 14:25:37] -rw------- 1 boinc boinc 196436028 Oct 13 10:54 HITS.pool.root.1
[2025-10-13 14:25:37] -rw------- 1 boinc boinc    993280 Oct 13 10:55 result.tar.gz
14:25:39 (3004058): run_atlas exited; CPU time 17645.215202
14:25:39 (3004058): called boinc_finish(0)

</stderr_txt>
]]>

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