Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:43:26 (191500): wrapper (7.7.26015): starting
14:43:26 (191500): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:43:26] Arguments: --nthreads 8
[2025-10-12 14:43:26] Threads: 8
[2025-10-12 14:43:26] Checking for CVMFS
[2025-10-12 14:43:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:43:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:43:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:43:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:43:28] 2.11.3.0 2143 32000 210552 151638 1 461 35385273 45568000 10823 130560 0 200451403 99.842 97639027 21682 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 14:43:28] CVMFS is ok
[2025-10-12 14:43:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:43:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:43:28] Further information can be found at the LHC@home message board.
[2025-10-12 14:43:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:43:28] Checking for apptainer binary...
[2025-10-12 14:43:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:43:28] Running /usr/bin/apptainer --version
[2025-10-12 14:43:28] apptainer version 1.4.1-1.el9
[2025-10-12 14:43:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:43:28] wns0003.triumf.lcg
[2025-10-12 14:43:28] apptainer works
[2025-10-12 14:43:28] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:43:28] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:43:28] Starting ATLAS job with PandaID=6840748795
[2025-10-12 14:43:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:49:21]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:49:21] 2025-10-12 21:48:48,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:49:21] 2025-10-12 21:48:48,269 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:49:21] 2025-10-12 21:48:48,269 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | WARNING  | wrong length of table data, x=[1760305525.0, 1760305586.0], y=[1441.0, 472381.0] (must be same and length>=4)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | INFO     | ..............................
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | INFO     | . Timing measurements:
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . get job = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . initial setup = 5 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . payload setup = 17 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . stage-in = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . payload execution = 79 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . stage-out = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . log creation = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | ..............................
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840748795/pilotlog.txt
[2025-10-12 14:49:21] 2025-10-12 21:48:48,304 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 14:49:21] - Log from pilotlog.txt -
[2025-10-12 14:49:21] 2025-10-12 21:48:48,267 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840748795/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,268 | INFO     | extracted standard info from prmon json
[2025-10-12 14:49:21] 2025-10-12 21:48:48,268 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:49:21] 2025-10-12 21:48:48,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:49:21] 2025-10-12 21:48:48,269 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:49:21] 2025-10-12 21:48:48,269 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | WARNING  | wrong length of table data, x=[1760305525.0, 1760305586.0], y=[1441.0, 472381.0] (must be same and length>=4)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | INFO     | ..............................
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | INFO     | . Timing measurements:
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . get job = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . initial setup = 5 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . payload setup = 17 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . stage-in = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . payload execution = 79 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . stage-out = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . log creation = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | ..............................
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840748795/pilotlog.txt
[2025-10-12 14:49:21] 2025-10-12 21:48:48,305 | WARNING  | 
[2025-10-12 14:49:21] [begin log extracts]
[2025-10-12 14:49:21] - Log from pilotlog.txt -
[2025-10-12 14:49:21] 2025-10-12 21:48:48,267 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840748795/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,268 | INFO     | extracted standard info from prmon json
[2025-10-12 14:49:21] 2025-10-12 21:48:48,268 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:49:21] 2025-10-12 21:48:48,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:49:21] 2025-10-12 21:48:48,269 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:49:21] 2025-10-12 21:48:48,269 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | WARNING  | wrong length of table data, x=[1760305525.0, 1760305586.0], y=[1441.0, 472381.0] (must be same and length>=4)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | INFO     | ..............................
[2025-10-12 14:49:21] 2025-10-12 21:48:48,273 | INFO     | . Timing measurements:
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . get job = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . initial setup = 5 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . payload setup = 17 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . stage-in = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . payload execution = 79 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . stage-out = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | . log creation = 0 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | ..............................
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 14:49:21] 2025-10-12 21:48:48,274 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840748795/pilotlog.txt
[2025-10-12 14:49:21] [end log extracts]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,305 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,306 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 14:49:21] 2025-10-12 21:48:48,615 | INFO     | 
[2025-10-12 14:49:21] 2025-10-12 21:48:48,615 | INFO     | job summary report
[2025-10-12 14:49:21] 2025-10-12 21:48:48,615 | INFO     | --------------------------------------------------
[2025-10-12 14:49:21] 2025-10-12 21:48:48,633 | INFO     | PanDA job id: 6840748795
[2025-10-12 14:49:21] 2025-10-12 21:48:48,633 | INFO     | task id: 46676269
[2025-10-12 14:49:21] 2025-10-12 21:48:48,633 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 14:46:16,003 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 14:49:21] 2025-10-12 21:48:48,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:49:21] 2025-10-12 21:48:48,633 | INFO     | pilot state: failed 
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | transexitcode: 65
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | exeerrorcode: 65
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | exitcode: 65
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | cpuconsumptiontime: 21 s
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | nevents: 0
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | neventsw: 0
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | pid: 209745
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | pgrp: 209745
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | corecount: 8
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | event service: False
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | sizes: {0: 2348632, 1: 2348831, 12: 2348831, 17: 2349121, 23: 2349149, 100: 2372666, 101: 2376986, 237: 2377124}
[2025-10-12 14:49:21] 2025-10-12 21:48:48,634 | INFO     | --------------------------------------------------
[2025-10-12 14:49:21] 2025-10-12 21:48:48,635 | INFO     | 
[2025-10-12 14:49:21] 2025-10-12 21:48:48,635 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 14:49:21] 2025-10-12 21:48:48,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,726 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:49:21] 2025-10-12 21:48:48,726 | INFO     | job 6840748795 has completed (purged errors)
[2025-10-12 14:49:21] 2025-10-12 21:48:48,726 | INFO     | overall cleanup function is called
[2025-10-12 14:49:21] 2025-10-12 21:48:49,735 | INFO     | --- collectZombieJob: --- 10, [209745]
[2025-10-12 14:49:21] 2025-10-12 21:48:49,735 | INFO     | zombie collector waiting for pid 209745
[2025-10-12 14:49:21] 2025-10-12 21:48:49,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:49:21] 2025-10-12 21:48:49,735 | INFO     | collected zombie processes
[2025-10-12 14:49:21] 2025-10-12 21:48:49,735 | INFO     | will attempt to kill all subprocesses of pid=209745
[2025-10-12 14:49:21] 2025-10-12 21:48:49,953 | INFO     | process IDs to be killed: [209745] (in reverse order)
[2025-10-12 14:49:21] 2025-10-12 21:48:50,099 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:49:21] 2025-10-12 21:48:50,100 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:49:21] 2025-10-12 21:48:50,107 | INFO     | did not find any defunct processes belonging to 209745
[2025-10-12 14:49:21] 2025-10-12 21:48:50,115 | INFO     | did not find any defunct processes belonging to 209745
[2025-10-12 14:49:21] 2025-10-12 21:48:50,116 | INFO     | ready for new job
[2025-10-12 14:49:21] 2025-10-12 21:48:50,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:49:21] 2025-10-12 21:48:50,118 | INFO     | ***************************************
[2025-10-12 14:49:21] 2025-10-12 21:48:50,118 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:49:21] 2025-10-12 21:48:50,118 | INFO     | ***************************************
[2025-10-12 14:49:21] 2025-10-12 21:48:50,118 | INFO     | 
[2025-10-12 14:49:21] 2025-10-12 21:48:50,119 | INFO     | architecture information:
[2025-10-12 14:49:21] 2025-10-12 21:48:50,139 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:49:21] 2025-10-12 21:48:50,223 | INFO     | cat /etc/os-release:
[2025-10-12 14:49:21] NAME="CentOS Linux"
[2025-10-12 14:49:21] VERSION="7 (Core)"
[2025-10-12 14:49:21] ID="centos"
[2025-10-12 14:49:21] ID_LIKE="rhel fedora"
[2025-10-12 14:49:21] VERSION_ID="7"
[2025-10-12 14:49:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:49:21] ANSI_COLOR="0;31"
[2025-10-12 14:49:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:49:21] HOME_URL="https://www.centos.org/"
[2025-10-12 14:49:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:49:21] 
[2025-10-12 14:49:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:49:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:49:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:49:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:49:21] 
[2025-10-12 14:49:21] 2025-10-12 21:48:50,233 | INFO     | ***************************************
[2025-10-12 14:49:21] 2025-10-12 21:48:50,746 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 14:49:21] 2025-10-12 21:48:50,793 | INFO     | sufficient remaining disk space (1231972990976 B)
[2025-10-12 14:49:21] 2025-10-12 21:48:50,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:49:21] 2025-10-12 21:48:50,793 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:49:21] 2025-10-12 21:48:50,793 | INFO     | update_server=False
[2025-10-12 14:49:21] 2025-10-12 21:48:50,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:49:21] 2025-10-12 21:48:50,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:49:21] 2025-10-12 21:48:51,066 | INFO     | all data control threads have been joined
[2025-10-12 14:49:21] 2025-10-12 21:48:51,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:49:21] 2025-10-12 21:48:51,711 | INFO     | aborting loop
[2025-10-12 14:49:21] 2025-10-12 21:48:51,801 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:51,863 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:51,870 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:51,882 | INFO     | all payload control threads have been joined
[2025-10-12 14:49:21] 2025-10-12 21:48:51,970 | INFO     | all job control threads have been joined
[2025-10-12 14:49:21] 2025-10-12 21:48:52,002 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:52,073 | INFO     | [data] control thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:52,369 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:52,678 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:52,716 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:52,885 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:52,895 | INFO     | [payload] control thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:52,980 | INFO     | [job] control thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:53,070 | INFO     | [job] validate thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:53,084 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:53,335 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:53,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:49:21] 2025-10-12 21:48:53,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:49:21] 2025-10-12 21:48:54,457 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:48:58,005 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:49:21] 2025-10-12 21:49:09,702 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:49:21] 2025-10-12 21:49:11,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334351771456)>', '<ExcThread(monitor, started 140333660747520)>']
[2025-10-12 14:49:21] 2025-10-12 21:49:16,260 | INFO     | all workflow threads have been joined
[2025-10-12 14:49:21] 2025-10-12 21:49:16,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:49:21] 2025-10-12 21:49:16,261 | INFO     | traces error code: 0
[2025-10-12 14:49:21] 2025-10-12 21:49:16,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:49:21] 2025-10-12 21:49:21,187 | INFO     | PID=196276 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 14:49:21] 2025-10-12 21:49:21,187 | INFO     | .. there are 19 such processes running
[2025-10-12 14:49:21] 2025-10-12 21:49:21,190 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:49:21] 2025-10-12 21:49:21,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:49:21] 2025-10-12 21:49:21,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:49:21] 2025-10-12 21:49:21,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:49:21] 2025-10-12 21:49:21,191 | INFO     | [monitor] control thread has ended
[2025-10-12 14:49:21] 2025-10-12 21:49:21,581 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:49:21] 2025-10-12 21:49:21,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:49:21] 2025-10-12 21:49:21,585 [wrapper] pilotpid: 196276
[2025-10-12 14:49:21] 2025-10-12 21:49:21,592 [wrapper] Pilot exit status: 0
[2025-10-12 14:49:21] 2025-10-12 21:49:21,611 [wrapper] pandaids: 6840748795
[2025-10-12 14:49:21] 2025-10-12 21:49:21,669 [wrapper] cleanup supervisor_pilot  196282 196277
[2025-10-12 14:49:21] 2025-10-12 21:49:21,673 [wrapper] Test setup, not cleaning
[2025-10-12 14:49:21] 2025-10-12 21:49:21,680 [wrapper] apfmon messages muted
[2025-10-12 14:49:21] 2025-10-12 21:49:21,685 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:49:21] 2025-10-12 21:49:21,691 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:49:21]  *** Error codes and diagnostics ***
[2025-10-12 14:49:21]     "exeErrorCode": 65,
[2025-10-12 14:49:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 14:49:21]     "pilotErrorCode": 1305,
[2025-10-12 14:49:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 14:49:21]  *** Listing of results directory ***
[2025-10-12 14:49:21] total 223224
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc    557409 Oct 12 13:08 pilot3.tar.gz
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc      5112 Oct 12 13:10 queuedata.json
[2025-10-12 14:49:21] -rwx------. 1 boinc boinc     36292 Oct 12 13:11 runpilot2-wrapper.sh
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc       100 Oct 12 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:49:21] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 14:43 run_atlas
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc       105 Oct 12 14:43 job.xml
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc      6443 Oct 12 14:43 init_data.xml
[2025-10-12 14:49:21] -rw-r--r--. 2 boinc boinc 224436700 Oct 12 14:43 EVNT.46676267._001293.pool.root.1
[2025-10-12 14:49:21] -rw-r--r--. 2 boinc boinc    569687 Oct 12 14:43 input.tar.gz
[2025-10-12 14:49:21] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:43 start_atlas.sh
[2025-10-12 14:49:21] drwxrwx--x. 2 boinc boinc      4096 Oct 12 14:43 shared
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc         0 Oct 12 14:43 boinc_lockfile
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc      2549 Oct 12 14:43 pandaJob.out
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc    975528 Oct 12 14:44 agis_schedconf.cvmfs.json
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc   1560580 Oct 12 14:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:49:21] drwx------. 5 boinc boinc      4096 Oct 12 14:44 pilot3
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc       524 Oct 12 14:46 boinc_task_state.xml
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc      1007 Oct 12 14:46 memory_monitor_summary.json
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc     22322 Oct 12 14:46 log.46676269._088361.job.log.tgz.1
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc      8433 Oct 12 14:48 heartbeat.json
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc      8192 Oct 12 14:49 boinc_mmap_file
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc        23 Oct 12 14:49 wrapper_checkpoint.txt
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc        95 Oct 12 14:49 pilot_heartbeat.json
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc       822 Oct 12 14:49 pilotlog.txt
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc     96299 Oct 12 14:49 log.46676269._088361.job.log.1
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc       188 Oct 12 14:49 output.list
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc       620 Oct 12 14:49 runtime_log
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc    143360 Oct 12 14:49 result.tar.gz
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc      8526 Oct 12 14:49 runtime_log.err
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc       645 Oct 12 14:49 l7WNDmwaHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhvUMDmCVIM5m.diag
[2025-10-12 14:49:21] -rw-r--r--. 1 boinc boinc     21845 Oct 12 14:49 stderr.txt
[2025-10-12 14:49:21] No HITS result produced
[2025-10-12 14:49:21]  *** Contents of shared directory: ***
[2025-10-12 14:49:21] total 219900
[2025-10-12 14:49:21] -rw-r--r--. 2 boinc boinc 224436700 Oct 12 14:43 ATLAS.root_0
[2025-10-12 14:49:21] -rw-r--r--. 2 boinc boinc    569687 Oct 12 14:43 input.tar.gz
[2025-10-12 14:49:21] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:43 start_atlas.sh
[2025-10-12 14:49:21] -rw-------. 1 boinc boinc    143360 Oct 12 14:49 result.tar.gz
14:49:23 (191500): run_atlas exited; CPU time 30.565301
14:49:23 (191500): called boinc_finish(0)

</stderr_txt>
]]>

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