Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:04:57 (2481375): wrapper (7.7.26015): starting
09:04:57 (2481375): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 09:04:57] Arguments: --nthreads 2
[2025-10-13 09:04:57] Threads: 2
[2025-10-13 09:04:57] Checking for CVMFS
[2025-10-13 09:04:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:04:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:04:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:04:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:04:58] 2.9.2.0 1210534 5431 59444 151652 0 57 28258056 36864000 0 130560 0 3331159 99.989 183320 748 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 09:04:58] CVMFS is ok
[2025-10-13 09:04:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:04:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:04:58] Further information can be found at the LHC@home message board.
[2025-10-13 09:04:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:04:58] Checking for apptainer binary...
[2025-10-13 09:04:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:04:58] Running /usr/bin/apptainer --version
[2025-10-13 09:04:58] apptainer version 1.4.1-1.1
[2025-10-13 09:04:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:04:58] thA369
[2025-10-13 09:04:58] apptainer works
[2025-10-13 09:04:58] Set ATHENA_PROC_NUMBER=2
[2025-10-13 09:04:58] Set ATHENA_CORE_NUMBER=2
[2025-10-13 09:04:58] Starting ATLAS job with PandaID=6840531208
[2025-10-13 09:04:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:13:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:13:35] VERSION="7 (Core)"
[2025-10-13 11:13:35] ID="centos"
[2025-10-13 11:13:35] ID_LIKE="rhel fedora"
[2025-10-13 11:13:35] VERSION_ID="7"
[2025-10-13 11:13:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:13:35] ANSI_COLOR="0;31"
[2025-10-13 11:13:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:13:35] HOME_URL="https://www.centos.org/"
[2025-10-13 11:13:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:13:35] 
[2025-10-13 11:13:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:13:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:13:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:13:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:13:35] 
[2025-10-13 11:13:35] 2025-10-13 09:13:16,224 | INFO     | ***************************************
[2025-10-13 11:13:35] 2025-10-13 09:13:16,725 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 11:13:35] 2025-10-13 09:13:16,737 | INFO     | sufficient remaining disk space (332262277120 B)
[2025-10-13 11:13:35] 2025-10-13 09:13:16,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:13:35] 2025-10-13 09:13:16,737 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:13:35] 2025-10-13 09:13:16,737 | INFO     | update_server=False
[2025-10-13 11:13:35] 2025-10-13 09:13:16,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:13:35] 2025-10-13 09:13:16,737 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 11:13:35] 2025-10-13 09:13:16,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:13:35] 2025-10-13 09:13:16,737 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:13:35] 2025-10-13 09:13:16,737 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:13:35] 2025-10-13 09:13:16,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:13:35] 2025-10-13 09:13:16,961 | INFO     | all job control threads have been joined
[2025-10-13 11:13:35] 2025-10-13 09:13:16,961 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 11:13:35] 2025-10-13 09:13:16,962 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 11:13:35] 2025-10-13 09:13:16,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:13:35] 2025-10-13 09:13:16,962 | INFO     | will abort loop
[2025-10-13 11:13:35] 2025-10-13 09:13:17,159 | INFO     | all data control threads have been joined
[2025-10-13 11:13:35] 2025-10-13 09:13:17,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:13:35] 2025-10-13 09:13:17,743 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:17,743 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:17,763 | INFO     | all payload control threads have been joined
[2025-10-13 11:13:35] 2025-10-13 09:13:17,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:13:35] 2025-10-13 09:13:17,967 | INFO     | [job] control thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:17,968 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:18,165 | INFO     | [data] control thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:18,292 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:18,754 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:18,766 | INFO     | [payload] control thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:18,858 | INFO     | [job] validate thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:18,901 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:19,017 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:19,053 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:19,246 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:19,346 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:21,526 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:13:35] 2025-10-13 09:13:21,892 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:27,167 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:13:35] 2025-10-13 09:13:28,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:13:35] 2025-10-13 09:13:29,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140085103568704)>', '<ExcThread(monitor, started 140084166776576)>']
[2025-10-13 11:13:35] 2025-10-13 09:13:29,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:13:35] 2025-10-13 09:13:29,809 | INFO     | [monitor] control thread has ended
[2025-10-13 11:13:35] 2025-10-13 09:13:34,766 | INFO     | all workflow threads have been joined
[2025-10-13 11:13:35] 2025-10-13 09:13:34,766 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:13:35] 2025-10-13 09:13:34,767 | INFO     | traces error code: 0
[2025-10-13 11:13:35] 2025-10-13 09:13:34,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:13:35] 2025-10-13 09:13:35,556 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:13:35] 2025-10-13 09:13:35,565 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:13:35] 2025-10-13 09:13:35,574 [wrapper] pilotpid: 2485082
[2025-10-13 11:13:35] 2025-10-13 09:13:35,582 [wrapper] Pilot exit status: 0
[2025-10-13 11:13:35] 2025-10-13 09:13:35,609 [wrapper] pandaids: 6840531208
[2025-10-13 11:13:35] 2025-10-13 09:13:35,676 [wrapper] cleanup supervisor_pilot 2505543 2485083
[2025-10-13 11:13:35] 2025-10-13 09:13:35,684 [wrapper] Test setup, not cleaning
[2025-10-13 11:13:35] 2025-10-13 09:13:35,693 [wrapper] apfmon messages muted
[2025-10-13 11:13:35] 2025-10-13 09:13:35,702 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:13:35] 2025-10-13 09:13:35,710 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:13:35]  *** Error codes and diagnostics ***
[2025-10-13 11:13:35]     "exeErrorCode": 0,
[2025-10-13 11:13:35]     "exeErrorDiag": "",
[2025-10-13 11:13:35]     "pilotErrorCode": 0,
[2025-10-13 11:13:35]     "pilotErrorDiag": "",
[2025-10-13 11:13:35]  *** Listing of results directory ***
[2025-10-13 11:13:35] total 419984
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc    557409 Oct 12 19:57 pilot3.tar.gz
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc      5112 Oct 12 20:07 queuedata.json
[2025-10-13 11:13:35] -rwx------ 1 boinc boinc     36292 Oct 12 20:08 runpilot2-wrapper.sh
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:13:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:04 run_atlas
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:04 job.xml
[2025-10-13 11:13:35] -rw-r--r-- 2 boinc boinc 220704597 Oct 13 09:04 EVNT.46676267._004386.pool.root.1
[2025-10-13 11:13:35] -rw-r--r-- 2 boinc boinc    569686 Oct 13 09:04 input.tar.gz
[2025-10-13 11:13:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:04 start_atlas.sh
[2025-10-13 11:13:35] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:04 shared
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:04 boinc_setup_complete
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc      6206 Oct 13 09:04 init_data.xml
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:04 boinc_lockfile
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc      2550 Oct 13 09:04 pandaJob.out
[2025-10-13 11:13:35] -rw------- 1 boinc boinc    972849 Oct 13 09:05 agis_schedconf.cvmfs.json
[2025-10-13 11:13:35] -rw------- 1 boinc boinc   1560580 Oct 13 09:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:13:35] drwx------ 5 boinc boinc      4096 Oct 13 09:05 pilot3
[2025-10-13 11:13:35] -rw------- 1 boinc boinc        95 Oct 13 11:12 pilot_heartbeat.json
[2025-10-13 11:13:35] -rw------- 1 boinc boinc 202722966 Oct 13 11:12 HITS.46676269._085650.pool.root.1
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc       530 Oct 13 11:12 boinc_task_state.xml
[2025-10-13 11:13:35] -rw------- 1 boinc boinc      1017 Oct 13 11:13 memory_monitor_summary.json
[2025-10-13 11:13:35] -rw------- 1 boinc boinc    268375 Oct 13 11:13 log.46676269._085650.job.log.tgz.1
[2025-10-13 11:13:35] -rw------- 1 boinc boinc      7749 Oct 13 11:13 heartbeat.json
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:13 boinc_mmap_file
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc        27 Oct 13 11:13 wrapper_checkpoint.txt
[2025-10-13 11:13:35] -rw------- 1 boinc boinc      4814 Oct 13 11:13 pilotlog.txt
[2025-10-13 11:13:35] -rw------- 1 boinc boinc   1106881 Oct 13 11:13 log.46676269._085650.job.log.1
[2025-10-13 11:13:35] -rw------- 1 boinc boinc       357 Oct 13 11:13 output.list
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc       620 Oct 13 11:13 runtime_log
[2025-10-13 11:13:35] -rw------- 1 boinc boinc   1392640 Oct 13 11:13 result.tar.gz
[2025-10-13 11:13:35] -rw------- 1 boinc boinc       659 Oct 13 11:13 ws0KDmBgFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoykNDmLkEgNo.diag
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc      8777 Oct 13 11:13 runtime_log.err
[2025-10-13 11:13:35] -rw-r--r-- 1 boinc boinc      8910 Oct 13 11:13 stderr.txt
[2025-10-13 11:13:35] HITS file was successfully produced:
[2025-10-13 11:13:35] -rw------- 1 boinc boinc 202722966 Oct 13 11:12 shared/HITS.pool.root.1
[2025-10-13 11:13:35]  *** Contents of shared directory: ***
[2025-10-13 11:13:35] total 415448
[2025-10-13 11:13:35] -rw-r--r-- 2 boinc boinc 220704597 Oct 13 09:04 ATLAS.root_0
[2025-10-13 11:13:35] -rw-r--r-- 2 boinc boinc    569686 Oct 13 09:04 input.tar.gz
[2025-10-13 11:13:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:04 start_atlas.sh
[2025-10-13 11:13:35] -rw------- 1 boinc boinc 202722966 Oct 13 11:12 HITS.pool.root.1
[2025-10-13 11:13:35] -rw------- 1 boinc boinc   1392640 Oct 13 11:13 result.tar.gz
11:13:37 (2481375): run_atlas exited; CPU time 14968.336963
11:13:37 (2481375): called boinc_finish(0)

</stderr_txt>
]]>

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