Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:11:43 (3271716): wrapper (7.7.26015): starting
18:11:43 (3271716): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:11:43] Arguments: --nthreads 8
[2025-10-12 18:11:43] Threads: 8
[2025-10-12 18:11:43] Checking for CVMFS
[2025-10-12 18:11:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:11:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:11:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:11:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:11:45] 2.13.2.0 1094862 129844 834164 151639 3 453 32829337 32935937 55840 16776704 73 404000418 99.730 280695256 19954 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 18:11:45] CVMFS is ok
[2025-10-12 18:11:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:11:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:11:45] Further information can be found at the LHC@home message board.
[2025-10-12 18:11:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:11:45] Checking for apptainer binary...
[2025-10-12 18:11:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:11:45] Running /usr/bin/apptainer --version
[2025-10-12 18:11:45] apptainer version 1.4.3-1.el9
[2025-10-12 18:11:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:11:45] lc-12-33.aglt2.org
[2025-10-12 18:11:45] apptainer works
[2025-10-12 18:11:45] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:11:45] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:11:46] Starting ATLAS job with PandaID=6840429715
[2025-10-12 18:11:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:14:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:14:09] 2025-10-13 01:13:23,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:14:09] 2025-10-13 01:13:25,765 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 21:14:09] 2025-10-13 01:13:25,785 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2787.3185416666674
[2025-10-12 21:14:09] 2025-10-13 01:13:25,822 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840429715/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:14:09] 2025-10-13 01:13:25,823 | INFO     | extracted standard info from prmon json
[2025-10-12 21:14:09] 2025-10-13 01:13:25,823 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:14:09] 2025-10-13 01:13:25,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:14:09] 2025-10-13 01:13:25,828 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:14:09] 2025-10-13 01:13:25,828 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:14:09] 2025-10-13 01:13:25,831 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:14:09] 2025-10-13 01:13:25,835 | INFO     | sum of square deviations: 1690505949.7272773
[2025-10-12 21:14:09] 2025-10-13 01:13:25,836 | INFO     | sum of deviations: -12887091066.545458
[2025-10-12 21:14:09] 2025-10-13 01:13:25,837 | INFO     | mean x: 1760312612.6136363
[2025-10-12 21:14:09] 2025-10-13 01:13:25,837 | INFO     | mean y: 2177447.977272727
[2025-10-12 21:14:09] 2025-10-13 01:13:25,837 | INFO     | -- intersect: 13421419745.231665
[2025-10-12 21:14:09] 2025-10-13 01:13:25,837 | INFO     | intersect: 13421419745.231665
[2025-10-12 21:14:09] 2025-10-13 01:13:25,837 | INFO     | chi2: 3.2138055935330607
[2025-10-12 21:14:09] 2025-10-13 01:13:25,837 | INFO     | sum of square deviations: 1550469468.1052651
[2025-10-12 21:14:09] 2025-10-13 01:13:25,838 | INFO     | sum of deviations: -1829547926.7894928
[2025-10-12 21:14:09] 2025-10-13 01:13:25,839 | INFO     | mean x: 1760312460.1052632
[2025-10-12 21:14:09] 2025-10-13 01:13:25,839 | INFO     | mean y: 2189237.9883040935
[2025-10-12 21:14:09] 2025-10-13 01:13:25,839 | INFO     | -- intersect: 2079351077.1201427
[2025-10-12 21:14:09] 2025-10-13 01:13:25,839 | INFO     | intersect: 2079351077.1201427
[2025-10-12 21:14:09] 2025-10-13 01:13:25,839 | INFO     | chi2: 2.4615048984426617
[2025-10-12 21:14:09] 2025-10-13 01:13:25,839 | INFO     | current chi2=2.4615048984426617 (change=23.40840704877129 %)
[2025-10-12 21:14:09] 2025-10-13 01:13:25,839 | INFO     | right removable region: 170
[2025-10-12 21:14:09] 2025-10-13 01:13:25,843 | INFO     | sum of square deviations: 1550478619.6608155
[2025-10-12 21:14:09] 2025-10-13 01:13:25,844 | INFO     | sum of deviations: -46297592043.95907
[2025-10-12 21:14:09] 2025-10-13 01:13:25,844 | INFO     | mean x: 1760312765.116959
[2025-10-12 21:14:09] 2025-10-13 01:13:25,844 | INFO     | mean y: 2213592.847953216
[2025-10-12 21:14:09] 2025-10-13 01:13:25,844 | INFO     | -- intersect: 52565493883.02517
[2025-10-12 21:14:09] 2025-10-13 01:13:25,844 | INFO     | intersect: 52565493883.02517
[2025-10-12 21:14:09] 2025-10-13 01:13:25,848 | INFO     | chi2: 1.069780929094653
[2025-10-12 21:14:09] 2025-10-13 01:13:25,849 | INFO     | current chi2=1.069780929094653 (change=66.71295453442157 %)
[2025-10-12 21:14:09] 2025-10-13 01:13:25,849 | INFO     | sum of square deviations: 1418404927.0903573
[2025-10-12 21:14:09] 2025-10-13 01:13:25,850 | INFO     | sum of deviations: -50297587669.96988
[2025-10-12 21:14:09] 2025-10-13 01:13:25,850 | INFO     | mean x: 1760312917.620482
[2025-10-12 21:14:09] 2025-10-13 01:13:25,850 | INFO     | mean y: 2218116.873493976
[2025-10-12 21:14:09] 2025-10-13 01:13:25,850 | INFO     | -- intersect: 62424091877.71978
[2025-10-12 21:14:09] 2025-10-13 01:13:25,850 | INFO     | intersect: 62424091877.71978
[2025-10-12 21:14:09] 2025-10-13 01:13:25,851 | INFO     | chi2: 0.9558688827280819
[2025-10-12 21:14:09] 2025-10-13 01:13:25,851 | INFO     | current chi2=0.9558688827280819 (change=10.648165738285678 %)
[2025-10-12 21:14:09] 2025-10-13 01:13:25,851 | INFO     | left removable region: 20
[2025-10-12 21:14:09] 2025-10-13 01:13:25,851 | INFO     | sum of square deviations: 1046504273.3399996
[2025-10-12 21:14:09] 2025-10-13 01:13:25,852 | INFO     | sum of deviations: -31786971844.899982
[2025-10-12 21:14:09] 2025-10-13 01:13:25,852 | INFO     | mean x: 1760313039.62
[2025-10-12 21:14:09] 2025-10-13 01:13:25,852 | INFO     | mean y: 2223003.6333333333
[2025-10-12 21:14:09] 2025-10-13 01:13:25,852 | INFO     | -- intersect: 53470729969.23458
[2025-10-12 21:14:09] 2025-10-13 01:13:25,852 | INFO     | intersect: 53470729969.23458
[2025-10-12 21:14:09] 2025-10-13 01:13:25,854 | INFO     | chi2: 0.15766672067653104
[2025-10-12 21:14:09] 2025-10-13 01:13:25,854 | INFO     | -- intersect: 53470729969.23458
[2025-10-12 21:14:09] 2025-10-13 01:13:25,854 | INFO     | current memory leak: -30.37 B/s (using 150 data points, chi2=0.16)
[2025-10-12 21:14:09] 2025-10-13 01:13:25,854 | INFO     | could have reported an average CPU frequency of 2807 MHz (9 samples)
[2025-10-12 21:14:09] 2025-10-13 01:13:25,855 | INFO     | ..............................
[2025-10-12 21:14:09] 2025-10-13 01:13:25,855 | INFO     | . Timing measurements:
[2025-10-12 21:14:09] 2025-10-13 01:13:25,855 | INFO     | . get job = 0 s
[2025-10-12 21:14:09] 2025-10-13 01:13:25,855 | INFO     | . initial setup = 4 s
[2025-10-12 21:14:09] 2025-10-13 01:13:25,855 | INFO     | . payload setup = 26 s
[2025-10-12 21:14:09] 2025-10-13 01:13:25,855 | INFO     | . stage-in = 0 s
[2025-10-12 21:14:09] 2025-10-13 01:13:25,855 | INFO     | . payload execution = 10715 s
[2025-10-12 21:14:09] 2025-10-13 01:13:25,855 | INFO     | . stage-out = 4 s
[2025-10-12 21:14:09] 2025-10-13 01:13:25,855 | INFO     | . log creation = 0 s
[2025-10-12 21:14:09] 2025-10-13 01:13:25,855 | INFO     | ..............................
[2025-10-12 21:14:09] 2025-10-13 01:13:26,579 | INFO     | PID=3280719 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:14:09] 2025-10-13 01:13:26,579 | INFO     | .. there are 83 such processes running
[2025-10-12 21:14:09] 2025-10-13 01:13:26,806 | INFO     | 
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | job summary report
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | --------------------------------------------------
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | PanDA job id: 6840429715
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | task id: 46676269
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | errors: (none)
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | pilot state: finished 
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | transexitcode: 0
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | exeerrorcode: 0
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | exeerrordiag: 
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | exitcode: 0
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | exitmsg: OK
[2025-10-12 21:14:09] 2025-10-13 01:13:26,807 | INFO     | cpuconsumptiontime: 41574 s
[2025-10-12 21:14:09] 2025-10-13 01:13:26,808 | INFO     | nevents: 400
[2025-10-12 21:14:09] 2025-10-13 01:13:26,808 | INFO     | neventsw: 0
[2025-10-12 21:14:09] 2025-10-13 01:13:26,808 | INFO     | pid: 3307484
[2025-10-12 21:14:09] 2025-10-13 01:13:26,808 | INFO     | pgrp: 3307484
[2025-10-12 21:14:09] 2025-10-13 01:13:26,808 | INFO     | corecount: 8
[2025-10-12 21:14:09] 2025-10-13 01:13:26,808 | INFO     | event service: False
[2025-10-12 21:14:09] 2025-10-13 01:13:26,808 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348941, 14: 2348941, 26: 2348969, 30: 2349387, 36: 2349415, 10745: 2378064, 10746: 2378063, 10751: 2387117, 10752: 
[2025-10-12 21:14:09] 2025-10-13 01:13:26,808 | INFO     | --------------------------------------------------
[2025-10-12 21:14:09] 2025-10-13 01:13:26,808 | INFO     | 
[2025-10-12 21:14:09] 2025-10-13 01:13:26,808 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 21:14:09] 2025-10-13 01:13:26,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,914 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:14:09] 2025-10-13 01:13:26,915 | INFO     | job 6840429715 has completed (purged errors)
[2025-10-12 21:14:09] 2025-10-13 01:13:26,915 | INFO     | overall cleanup function is called
[2025-10-12 21:14:09] 2025-10-13 01:13:27,927 | INFO     | --- collectZombieJob: --- 10, [3307484]
[2025-10-12 21:14:09] 2025-10-13 01:13:27,928 | INFO     | zombie collector waiting for pid 3307484
[2025-10-12 21:14:09] 2025-10-13 01:13:27,928 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:14:09] 2025-10-13 01:13:27,928 | INFO     | collected zombie processes
[2025-10-12 21:14:09] 2025-10-13 01:13:27,928 | INFO     | will attempt to kill all subprocesses of pid=3307484
[2025-10-12 21:14:09] 2025-10-13 01:13:29,656 | INFO     | process IDs to be killed: [3307484] (in reverse order)
[2025-10-12 21:14:09] 2025-10-13 01:13:29,957 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:14:09] 2025-10-13 01:13:29,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:14:09] 2025-10-13 01:13:30,001 | INFO     | did not find any defunct processes belonging to 3307484
[2025-10-12 21:14:09] 2025-10-13 01:13:30,127 | INFO     | did not find any defunct processes belonging to 3307484
[2025-10-12 21:14:09] 2025-10-13 01:13:30,127 | INFO     | ready for new job
[2025-10-12 21:14:09] 2025-10-13 01:13:30,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:14:09] 2025-10-13 01:13:30,156 | INFO     | ***************************************
[2025-10-12 21:14:09] 2025-10-13 01:13:30,162 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:14:09] 2025-10-13 01:13:30,162 | INFO     | ***************************************
[2025-10-12 21:14:09] 2025-10-13 01:13:30,162 | INFO     | 
[2025-10-12 21:14:09] 2025-10-13 01:13:30,184 | INFO     | architecture information:
[2025-10-12 21:14:09] 2025-10-13 01:13:30,187 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:14:09] 2025-10-13 01:13:30,234 | INFO     | cat /etc/os-release:
[2025-10-12 21:14:09] NAME="CentOS Linux"
[2025-10-12 21:14:09] VERSION="7 (Core)"
[2025-10-12 21:14:09] ID="centos"
[2025-10-12 21:14:09] ID_LIKE="rhel fedora"
[2025-10-12 21:14:09] VERSION_ID="7"
[2025-10-12 21:14:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:14:09] ANSI_COLOR="0;31"
[2025-10-12 21:14:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:14:09] HOME_URL="https://www.centos.org/"
[2025-10-12 21:14:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:14:09] 
[2025-10-12 21:14:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:14:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:14:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:14:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:14:09] 
[2025-10-12 21:14:09] 2025-10-13 01:13:30,234 | INFO     | ***************************************
[2025-10-12 21:14:09] 2025-10-13 01:13:30,756 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 21:14:09] 2025-10-13 01:13:30,802 | INFO     | sufficient remaining disk space (73982279680 B)
[2025-10-12 21:14:09] 2025-10-13 01:13:30,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:14:09] 2025-10-13 01:13:30,803 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:14:09] 2025-10-13 01:13:30,803 | INFO     | update_server=False
[2025-10-12 21:14:09] 2025-10-13 01:13:30,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:14:09] 2025-10-13 01:13:30,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:14:09] 2025-10-13 01:13:30,807 | INFO     | aborting loop
[2025-10-12 21:14:09] 2025-10-13 01:13:31,170 | INFO     | all data control threads have been joined
[2025-10-12 21:14:09] 2025-10-13 01:13:31,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:14:09] 2025-10-13 01:13:31,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:14:09] 2025-10-13 01:13:31,809 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:31,817 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:31,890 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:31,894 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:31,948 | INFO     | all payload control threads have been joined
[2025-10-12 21:14:09] 2025-10-13 01:13:31,970 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:32,043 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:32,177 | INFO     | [data] control thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:32,311 | INFO     | all job control threads have been joined
[2025-10-12 21:14:09] 2025-10-13 01:13:32,357 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:32,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:32,646 | INFO     | [job] validate thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:32,808 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:32,808 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:32,955 | INFO     | [payload] control thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:33,262 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:33,318 | INFO     | [job] control thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:33,646 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:14:09] 2025-10-13 01:13:37,668 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:14:09] 2025-10-13 01:13:59,629 | INFO     | PID=3280719 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:14:09] 2025-10-13 01:13:59,629 | INFO     | .. there are 83 such processes running
[2025-10-12 21:14:09] 2025-10-13 01:13:59,636 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:14:09] 2025-10-13 01:13:59,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:14:09] 2025-10-13 01:13:59,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:14:09] 2025-10-13 01:14:02,954 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:14:09] 2025-10-13 01:14:03,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585841801024)>', '<ExcThread(monitor, started 140585209947904)>']
[2025-10-12 21:14:09] 2025-10-13 01:14:03,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:14:09] 2025-10-13 01:14:03,674 | INFO     | [monitor] control thread has ended
[2025-10-12 21:14:09] 2025-10-13 01:14:08,039 | INFO     | all workflow threads have been joined
[2025-10-12 21:14:09] 2025-10-13 01:14:08,049 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:14:09] 2025-10-13 01:14:08,049 | INFO     | traces error code: 0
[2025-10-12 21:14:09] 2025-10-13 01:14:08,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:14:09] 2025-10-13 01:14:08,339 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:14:09] 2025-10-13 01:14:08,357 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:14:09] 2025-10-13 01:14:08,365 [wrapper] pilotpid: 3280719
[2025-10-12 21:14:09] 2025-10-13 01:14:08,380 [wrapper] Pilot exit status: 0
[2025-10-12 21:14:09] 2025-10-13 01:14:08,475 [wrapper] pandaids: 6840429715
[2025-10-12 21:14:09] 2025-10-13 01:14:08,604 [wrapper] cleanup supervisor_pilot  371850 3280720
[2025-10-12 21:14:09] 2025-10-13 01:14:08,617 [wrapper] Test setup, not cleaning
[2025-10-12 21:14:09] 2025-10-13 01:14:08,641 [wrapper] apfmon messages muted
[2025-10-12 21:14:09] 2025-10-13 01:14:08,715 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:14:09] 2025-10-13 01:14:08,739 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:14:09]  *** Error codes and diagnostics ***
[2025-10-12 21:14:09]     "exeErrorCode": 0,
[2025-10-12 21:14:09]     "exeErrorDiag": "",
[2025-10-12 21:14:09]     "pilotErrorCode": 0,
[2025-10-12 21:14:09]     "pilotErrorDiag": "",
[2025-10-12 21:14:09]  *** Listing of results directory ***
[2025-10-12 21:14:09] total 413680
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-12 21:14:09] -rwx------. 1 boincer umatlas     36292 Oct 12 13:27 runpilot2-wrapper.sh
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:27 queuedata.json
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:14:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:11 run_atlas
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:11 job.xml
[2025-10-12 21:14:09] -rw-r--r--. 2 boincer umatlas 221605393 Oct 12 18:11 EVNT.46676267._004818.pool.root.1
[2025-10-12 21:14:09] -rw-r--r--. 2 boincer umatlas    569671 Oct 12 18:11 input.tar.gz
[2025-10-12 21:14:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:11 start_atlas.sh
[2025-10-12 21:14:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:11 shared
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:11 boinc_lockfile
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 18:11 pandaJob.out
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas    975528 Oct 12 18:12 agis_schedconf.cvmfs.json
[2025-10-12 21:14:09] drwx------. 5 boincer umatlas      4096 Oct 12 18:12 pilot3
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas 194674071 Oct 12 21:11 HITS.46676269._084828.pool.root.1
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas       529 Oct 12 21:11 boinc_task_state.xml
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas      6877 Oct 12 21:12 init_data.xml
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas      1043 Oct 12 21:12 memory_monitor_summary.json
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:12 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas    395951 Oct 12 21:12 log.46676269._084828.job.log.tgz.1
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas      7833 Oct 12 21:13 heartbeat.json
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas        95 Oct 12 21:13 pilot_heartbeat.json
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:14 boinc_mmap_file
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas        27 Oct 12 21:14 wrapper_checkpoint.txt
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas      4824 Oct 12 21:14 pilotlog.txt
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas   1318078 Oct 12 21:14 log.46676269._084828.job.log.1
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas       357 Oct 12 21:14 output.list
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:14 runtime_log
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas   1730560 Oct 12 21:14 result.tar.gz
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 21:14 runtime_log.err
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas       654 Oct 12 21:14 8ztLDmJ2ES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQWUMDmeExqTn.diag
[2025-10-12 21:14:09] -rw-r--r--. 1 boincer umatlas     21334 Oct 12 21:14 stderr.txt
[2025-10-12 21:14:09] HITS file was successfully produced:
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas 194674071 Oct 12 21:11 shared/HITS.pool.root.1
[2025-10-12 21:14:09]  *** Contents of shared directory: ***
[2025-10-12 21:14:09] total 408800
[2025-10-12 21:14:09] -rw-r--r--. 2 boincer umatlas 221605393 Oct 12 18:11 ATLAS.root_0
[2025-10-12 21:14:09] -rw-r--r--. 2 boincer umatlas    569671 Oct 12 18:11 input.tar.gz
[2025-10-12 21:14:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:11 start_atlas.sh
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas 194674071 Oct 12 21:11 HITS.pool.root.1
[2025-10-12 21:14:09] -rw-------. 1 boincer umatlas   1730560 Oct 12 21:14 result.tar.gz
21:14:31 (3271716): run_atlas exited; CPU time 42237.802785
21:14:31 (3271716): called boinc_finish(0)

</stderr_txt>
]]>

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