Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:40 (540781): wrapper (7.7.26015): starting
00:04:40 (540781): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:04:40] Arguments: --nthreads 9
[2025-10-13 00:04:40] Threads: 9
[2025-10-13 00:04:40] Checking for CVMFS
[2025-10-13 00:04:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:04:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:04:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:04:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:04:43] 2.13.2.0 403710 12198 204356 151647 0 262 26661671 32935936 19218 16776704 0 32849114 99.714 25022865 28254 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:04:43] CVMFS is ok
[2025-10-13 00:04:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:04:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:04:44] Further information can be found at the LHC@home message board.
[2025-10-13 00:04:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:04:44] Checking for apptainer binary...
[2025-10-13 00:04:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:04:44] Running /usr/bin/apptainer --version
[2025-10-13 00:04:44] apptainer version 1.4.3-1.el9
[2025-10-13 00:04:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:04:45] c-4-40.aglt2.org
[2025-10-13 00:04:45] apptainer works
[2025-10-13 00:04:45] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:04:45] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:04:46] Starting ATLAS job with PandaID=6840081240
[2025-10-13 00:04:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:46:17]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:46:17] 2025-10-13 16:45:27,534 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 12:46:17] 2025-10-13 16:45:27,582 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:46:17] 2025-10-13 16:45:27,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:46:17] 2025-10-13 16:45:27,606 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:46:17] 2025-10-13 16:45:27,608 | INFO     | sum of square deviations: 126670773235.21422
[2025-10-13 12:46:17] 2025-10-13 16:45:27,649 | INFO     | sum of deviations: 876130152135.502
[2025-10-13 12:46:17] 2025-10-13 16:45:27,649 | INFO     | mean x: 1760351250.9285715
[2025-10-13 12:46:17] 2025-10-13 16:45:27,649 | INFO     | mean y: 2065776.5566037735
[2025-10-13 12:46:17] 2025-10-13 16:45:27,649 | INFO     | -- intersect: -12173566927.793346
[2025-10-13 12:46:17] 2025-10-13 16:45:27,649 | INFO     | intersect: -12173566927.793346
[2025-10-13 12:46:17] 2025-10-13 16:45:27,651 | INFO     | chi2: 8.597904585674687
[2025-10-13 12:46:17] 2025-10-13 16:45:27,652 | INFO     | sum of square deviations: 124127278346.78954
[2025-10-13 12:46:17] 2025-10-13 16:45:27,668 | INFO     | sum of deviations: 918204722942.0924
[2025-10-13 12:46:17] 2025-10-13 16:45:27,669 | INFO     | mean x: 1760351098.431479
[2025-10-13 12:46:17] 2025-10-13 16:45:27,669 | INFO     | mean y: 2068285.8236092266
[2025-10-13 12:46:17] 2025-10-13 16:45:27,671 | INFO     | -- intersect: -13019748627.782234
[2025-10-13 12:46:17] 2025-10-13 16:45:27,671 | INFO     | intersect: -13019748627.782234
[2025-10-13 12:46:17] 2025-10-13 16:45:27,672 | INFO     | chi2: 7.897020447844305
[2025-10-13 12:46:17] 2025-10-13 16:45:27,673 | INFO     | current chi2=7.897020447844305 (change=8.151801765725025 %)
[2025-10-13 12:46:17] 2025-10-13 16:45:27,673 | INFO     | right removable region: 736
[2025-10-13 12:46:17] 2025-10-13 16:45:27,674 | INFO     | sum of square deviations: 124127084366.78963
[2025-10-13 12:46:17] 2025-10-13 16:45:27,741 | INFO     | sum of deviations: 687164977283.888
[2025-10-13 12:46:17] 2025-10-13 16:45:27,741 | INFO     | mean x: 1760351403.431479
[2025-10-13 12:46:17] 2025-10-13 16:45:27,741 | INFO     | mean y: 2077099.1858887381
[2025-10-13 12:46:17] 2025-10-13 16:45:27,741 | INFO     | -- intersect: -9743191939.569496
[2025-10-13 12:46:17] 2025-10-13 16:45:27,741 | INFO     | intersect: -9743191939.569496
[2025-10-13 12:46:17] 2025-10-13 16:45:27,743 | INFO     | chi2: 5.172714666170554
[2025-10-13 12:46:17] 2025-10-13 16:45:27,743 | INFO     | current chi2=5.172714666170554 (change=39.83749628032601 %)
[2025-10-13 12:46:17] 2025-10-13 16:45:27,744 | INFO     | sum of square deviations: 121617854910.30562
[2025-10-13 12:46:17] 2025-10-13 16:45:27,760 | INFO     | sum of deviations: 553101130389.137
[2025-10-13 12:46:17] 2025-10-13 16:45:27,760 | INFO     | mean x: 1760351555.9289618
[2025-10-13 12:46:17] 2025-10-13 16:45:27,761 | INFO     | mean y: 2085243.5218579236
[2025-10-13 12:46:17] 2025-10-13 16:45:27,761 | INFO     | -- intersect: -8003749394.69523
[2025-10-13 12:46:17] 2025-10-13 16:45:27,761 | INFO     | intersect: -8003749394.69523
[2025-10-13 12:46:17] 2025-10-13 16:45:27,762 | INFO     | chi2: 3.565300071760113
[2025-10-13 12:46:17] 2025-10-13 16:45:27,762 | INFO     | current chi2=3.565300071760113 (change=31.074874570656274 %)
[2025-10-13 12:46:17] 2025-10-13 16:45:27,764 | INFO     | sum of square deviations: 119142672487.813
[2025-10-13 12:46:17] 2025-10-13 16:45:27,779 | INFO     | sum of deviations: 464170178210.799
[2025-10-13 12:46:17] 2025-10-13 16:45:27,780 | INFO     | mean x: 1760351708.42641
[2025-10-13 12:46:17] 2025-10-13 16:45:27,780 | INFO     | mean y: 2090722.781292985
[2025-10-13 12:46:17] 2025-10-13 16:45:27,780 | INFO     | -- intersect: -6856096601.307412
[2025-10-13 12:46:17] 2025-10-13 16:45:27,780 | INFO     | intersect: -6856096601.307412
[2025-10-13 12:46:17] 2025-10-13 16:45:27,781 | INFO     | chi2: 2.913499540481504
[2025-10-13 12:46:17] 2025-10-13 16:45:27,781 | INFO     | current chi2=2.913499540481504 (change=18.281786053335733 %)
[2025-10-13 12:46:17] 2025-10-13 16:45:27,781 | INFO     | left removable region: 30
[2025-10-13 12:46:17] 2025-10-13 16:45:27,783 | INFO     | sum of square deviations: 109113772968.5551
[2025-10-13 12:46:17] 2025-10-13 16:45:27,797 | INFO     | sum of deviations: 280151204834.93207
[2025-10-13 12:46:17] 2025-10-13 16:45:27,797 | INFO     | mean x: 1760351982.9121814
[2025-10-13 12:46:17] 2025-10-13 16:45:27,798 | INFO     | mean y: 2107999.531161473
[2025-10-13 12:46:17] 2025-10-13 16:45:27,798 | INFO     | -- intersect: -4517621412.525113
[2025-10-13 12:46:17] 2025-10-13 16:45:27,798 | INFO     | intersect: -4517621412.525113
[2025-10-13 12:46:17] 2025-10-13 16:45:27,799 | INFO     | chi2: 0.7392136070446043
[2025-10-13 12:46:17] 2025-10-13 16:45:27,799 | INFO     | -- intersect: -4517621412.525113
[2025-10-13 12:46:17] 2025-10-13 16:45:27,799 | INFO     | current memory leak: 2.57 B/s (using 706 data points, chi2=0.74)
[2025-10-13 12:46:17] 2025-10-13 16:45:27,801 | INFO     | could have reported an average CPU frequency of 2599 MHz (28 samples)
[2025-10-13 12:46:17] 2025-10-13 16:45:27,801 | INFO     | ..............................
[2025-10-13 12:46:17] 2025-10-13 16:45:27,801 | INFO     | . Timing measurements:
[2025-10-13 12:46:17] 2025-10-13 16:45:27,801 | INFO     | . get job = 0 s
[2025-10-13 12:46:17] 2025-10-13 16:45:27,801 | INFO     | . initial setup = 8 s
[2025-10-13 12:46:17] 2025-10-13 16:45:27,801 | INFO     | . payload setup = 73 s
[2025-10-13 12:46:17] 2025-10-13 16:45:27,802 | INFO     | . stage-in = 0 s
[2025-10-13 12:46:17] 2025-10-13 16:45:27,802 | INFO     | . payload execution = 45298 s
[2025-10-13 12:46:17] 2025-10-13 16:45:27,802 | INFO     | . stage-out = 5 s
[2025-10-13 12:46:17] 2025-10-13 16:45:27,802 | INFO     | . log creation = 1 s
[2025-10-13 12:46:17] 2025-10-13 16:45:27,802 | INFO     | ..............................
[2025-10-13 12:46:17] 2025-10-13 16:45:28,592 | INFO     | 
[2025-10-13 12:46:17] 2025-10-13 16:45:28,592 | INFO     | job summary report
[2025-10-13 12:46:17] 2025-10-13 16:45:28,592 | INFO     | --------------------------------------------------
[2025-10-13 12:46:17] 2025-10-13 16:45:28,592 | INFO     | PanDA job id: 6840081240
[2025-10-13 12:46:17] 2025-10-13 16:45:28,592 | INFO     | task id: 46676269
[2025-10-13 12:46:17] 2025-10-13 16:45:28,593 | INFO     | errors: (none)
[2025-10-13 12:46:17] 2025-10-13 16:45:28,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:46:17] 2025-10-13 16:45:28,593 | INFO     | pilot state: finished 
[2025-10-13 12:46:17] 2025-10-13 16:45:28,593 | INFO     | transexitcode: 0
[2025-10-13 12:46:17] 2025-10-13 16:45:28,593 | INFO     | exeerrorcode: 0
[2025-10-13 12:46:17] 2025-10-13 16:45:28,593 | INFO     | exeerrordiag: 
[2025-10-13 12:46:17] 2025-10-13 16:45:28,593 | INFO     | exitcode: 0
[2025-10-13 12:46:17] 2025-10-13 16:45:28,593 | INFO     | exitmsg: OK
[2025-10-13 12:46:17] 2025-10-13 16:45:28,593 | INFO     | cpuconsumptiontime: 49932 s
[2025-10-13 12:46:17] 2025-10-13 16:45:28,593 | INFO     | nevents: 400
[2025-10-13 12:46:17] 2025-10-13 16:45:28,594 | INFO     | neventsw: 0
[2025-10-13 12:46:17] 2025-10-13 16:45:28,594 | INFO     | pid: 566187
[2025-10-13 12:46:17] 2025-10-13 16:45:28,594 | INFO     | pgrp: 566187
[2025-10-13 12:46:17] 2025-10-13 16:45:28,594 | INFO     | corecount: 9
[2025-10-13 12:46:17] 2025-10-13 16:45:28,594 | INFO     | event service: False
[2025-10-13 12:46:17] 2025-10-13 16:45:28,594 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 15: 2348913, 27: 2348941, 38: 2348969, 49: 2349125, 52: 2349415, 60: 2349443, 45376: 2394068, 45382: 2403066, 45384: 24
[2025-10-13 12:46:17] 2025-10-13 16:45:28,594 | INFO     | --------------------------------------------------
[2025-10-13 12:46:17] 2025-10-13 16:45:28,594 | INFO     | 
[2025-10-13 12:46:17] 2025-10-13 16:45:28,594 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 12:46:17] 2025-10-13 16:45:28,666 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,667 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,667 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,667 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,667 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,667 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,667 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,667 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,670 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,671 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:46:17] 2025-10-13 16:45:28,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,672 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:46:17] 2025-10-13 16:45:28,672 | INFO     | job 6840081240 has completed (purged errors)
[2025-10-13 12:46:17] 2025-10-13 16:45:28,673 | INFO     | overall cleanup function is called
[2025-10-13 12:46:17] 2025-10-13 16:45:29,689 | INFO     | --- collectZombieJob: --- 10, [566187]
[2025-10-13 12:46:17] 2025-10-13 16:45:29,689 | INFO     | zombie collector waiting for pid 566187
[2025-10-13 12:46:17] 2025-10-13 16:45:29,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:46:17] 2025-10-13 16:45:29,689 | INFO     | collected zombie processes
[2025-10-13 12:46:17] 2025-10-13 16:45:29,690 | INFO     | will attempt to kill all subprocesses of pid=566187
[2025-10-13 12:46:17] 2025-10-13 16:45:31,854 | INFO     | process IDs to be killed: [566187] (in reverse order)
[2025-10-13 12:46:17] 2025-10-13 16:45:32,112 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:46:17] 2025-10-13 16:45:32,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:46:17] 2025-10-13 16:45:32,155 | INFO     | did not find any defunct processes belonging to 566187
[2025-10-13 12:46:17] 2025-10-13 16:45:32,279 | INFO     | did not find any defunct processes belonging to 566187
[2025-10-13 12:46:17] 2025-10-13 16:45:32,280 | INFO     | ready for new job
[2025-10-13 12:46:17] 2025-10-13 16:45:32,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:46:17] 2025-10-13 16:45:32,320 | INFO     | ***************************************
[2025-10-13 12:46:17] 2025-10-13 16:45:32,320 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:46:17] 2025-10-13 16:45:32,320 | INFO     | ***************************************
[2025-10-13 12:46:17] 2025-10-13 16:45:32,320 | INFO     | 
[2025-10-13 12:46:17] 2025-10-13 16:45:32,351 | INFO     | architecture information:
[2025-10-13 12:46:17] 2025-10-13 16:45:32,360 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:46:17] 2025-10-13 16:45:32,506 | INFO     | cat /etc/os-release:
[2025-10-13 12:46:17] NAME="CentOS Linux"
[2025-10-13 12:46:17] VERSION="7 (Core)"
[2025-10-13 12:46:17] ID="centos"
[2025-10-13 12:46:17] ID_LIKE="rhel fedora"
[2025-10-13 12:46:17] VERSION_ID="7"
[2025-10-13 12:46:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:46:17] ANSI_COLOR="0;31"
[2025-10-13 12:46:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:46:17] HOME_URL="https://www.centos.org/"
[2025-10-13 12:46:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:46:17] 
[2025-10-13 12:46:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:46:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:46:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:46:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:46:17] 
[2025-10-13 12:46:17] 2025-10-13 16:45:32,506 | INFO     | ***************************************
[2025-10-13 12:46:17] 2025-10-13 16:45:33,010 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 12:46:17] 2025-10-13 16:45:33,174 | INFO     | sufficient remaining disk space (75654758400 B)
[2025-10-13 12:46:17] 2025-10-13 16:45:33,175 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:46:17] 2025-10-13 16:45:33,175 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:46:17] 2025-10-13 16:45:33,175 | INFO     | update_server=False
[2025-10-13 12:46:17] 2025-10-13 16:45:33,175 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:46:17] 2025-10-13 16:45:33,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:46:17] 2025-10-13 16:45:33,176 | INFO     | aborting loop
[2025-10-13 12:46:17] 2025-10-13 16:45:33,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:46:17] 2025-10-13 16:45:33,329 | INFO     | all data control threads have been joined
[2025-10-13 12:46:17] 2025-10-13 16:45:33,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:46:17] 2025-10-13 16:45:34,181 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:34,182 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:34,247 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:34,248 | INFO     | [job] validate thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:34,248 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:34,307 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:34,335 | INFO     | [data] control thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:34,458 | INFO     | all job control threads have been joined
[2025-10-13 12:46:17] 2025-10-13 16:45:34,600 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:34,621 | INFO     | all payload control threads have been joined
[2025-10-13 12:46:17] 2025-10-13 16:45:34,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:34,869 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:34,901 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:34,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:46:17] 2025-10-13 16:45:35,185 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:35,464 | INFO     | [job] control thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:35,627 | INFO     | [payload] control thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:35,705 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:45:38,999 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:46:17] 2025-10-13 16:46:01,421 | INFO     | PID=551080 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 12:46:17] 2025-10-13 16:46:01,421 | INFO     | .. there are 21 such processes running
[2025-10-13 12:46:17] 2025-10-13 16:46:01,421 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:46:17] 2025-10-13 16:46:01,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:46:17] 2025-10-13 16:46:01,421 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:46:17] 2025-10-13 16:46:09,595 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:46:17] 2025-10-13 16:46:10,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962476386112)>', '<ExcThread(monitor, started 139961818924800)>']
[2025-10-13 12:46:17] 2025-10-13 16:46:11,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:46:17] 2025-10-13 16:46:11,482 | INFO     | [monitor] control thread has ended
[2025-10-13 12:46:17] 2025-10-13 16:46:15,986 | INFO     | all workflow threads have been joined
[2025-10-13 12:46:17] 2025-10-13 16:46:15,986 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:46:17] 2025-10-13 16:46:15,987 | INFO     | traces error code: 0
[2025-10-13 12:46:17] 2025-10-13 16:46:15,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:46:17] 2025-10-13 16:46:16,632 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:46:17] 2025-10-13 16:46:16,637 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:46:17] 2025-10-13 16:46:16,666 [wrapper] pilotpid: 551080
[2025-10-13 12:46:17] 2025-10-13 16:46:16,719 [wrapper] Pilot exit status: 0
[2025-10-13 12:46:17] 2025-10-13 16:46:16,793 [wrapper] pandaids: 6840081240
[2025-10-13 12:46:17] 2025-10-13 16:46:16,892 [wrapper] cleanup supervisor_pilot 2426405 551081
[2025-10-13 12:46:17] 2025-10-13 16:46:16,930 [wrapper] Test setup, not cleaning
[2025-10-13 12:46:17] 2025-10-13 16:46:16,957 [wrapper] apfmon messages muted
[2025-10-13 12:46:17] 2025-10-13 16:46:16,996 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:46:17] 2025-10-13 16:46:17,012 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:46:17]  *** Error codes and diagnostics ***
[2025-10-13 12:46:17]     "exeErrorCode": 0,
[2025-10-13 12:46:17]     "exeErrorDiag": "",
[2025-10-13 12:46:17]     "pilotErrorCode": 0,
[2025-10-13 12:46:17]     "pilotErrorDiag": "",
[2025-10-13 12:46:17]  *** Listing of results directory ***
[2025-10-13 12:46:17] total 421520
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:22 pilot3.tar.gz
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 09:34 queuedata.json
[2025-10-13 12:46:17] -rwx------. 1 boincer umatlas     36292 Oct 12 09:35 runpilot2-wrapper.sh
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:46:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:04 run_atlas
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:04 job.xml
[2025-10-13 12:46:17] -rw-r--r--. 2 boincer umatlas 220112456 Oct 13 00:04 EVNT.46676267._003871.pool.root.1
[2025-10-13 12:46:17] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:04 input.tar.gz
[2025-10-13 12:46:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:04 shared
[2025-10-13 12:46:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:04 boinc_lockfile
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:04 pandaJob.out
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas    974373 Oct 13 00:06 agis_schedconf.cvmfs.json
[2025-10-13 12:46:17] drwx------. 5 boincer umatlas      4096 Oct 13 00:06 pilot3
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas      6658 Oct 13 12:38 init_data.xml
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas 195250414 Oct 13 12:43 HITS.46676269._079608.pool.root.1
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas       531 Oct 13 12:44 boinc_task_state.xml
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas      1041 Oct 13 12:44 memory_monitor_summary.json
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas   1560580 Oct 13 12:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas    860145 Oct 13 12:44 log.46676269._079608.job.log.tgz.1
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas      7835 Oct 13 12:45 heartbeat.json
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas        95 Oct 13 12:45 pilot_heartbeat.json
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 12:45 boinc_mmap_file
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas        28 Oct 13 12:45 wrapper_checkpoint.txt
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas      4823 Oct 13 12:46 pilotlog.txt
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas   5328989 Oct 13 12:46 log.46676269._079608.job.log.1
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas       357 Oct 13 12:46 output.list
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas       620 Oct 13 12:46 runtime_log
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas   6205440 Oct 13 12:46 result.tar.gz
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas       657 Oct 13 12:46 Y2CNDmLPBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD2jNDmK8bMYn.diag
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 12:46 runtime_log.err
[2025-10-13 12:46:17] -rw-r--r--. 1 boincer umatlas     21000 Oct 13 12:46 stderr.txt
[2025-10-13 12:46:17] HITS file was successfully produced:
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas 195250414 Oct 13 12:43 shared/HITS.pool.root.1
[2025-10-13 12:46:17]  *** Contents of shared directory: ***
[2025-10-13 12:46:17] total 412272
[2025-10-13 12:46:17] -rw-r--r--. 2 boincer umatlas 220112456 Oct 13 00:04 ATLAS.root_0
[2025-10-13 12:46:17] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:04 input.tar.gz
[2025-10-13 12:46:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas 195250414 Oct 13 12:43 HITS.pool.root.1
[2025-10-13 12:46:17] -rw-------. 1 boincer umatlas   6205440 Oct 13 12:46 result.tar.gz
12:46:18 (540781): run_atlas exited; CPU time 51524.785161
12:46:18 (540781): called boinc_finish(0)

</stderr_txt>
]]>

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