Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
21:52:06 (126953): wrapper (7.7.26015): starting
21:52:06 (126953): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 21:52:06] Arguments: --nthreads 4
[2025-10-12 21:52:06] Threads: 4
[2025-10-12 21:52:06] Checking for CVMFS
[2025-10-12 21:52:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:52:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:52:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:52:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:52:06] 2.12.7.0 5521 95 50184 151647 0 187 3768571 4096000 669 130560 0 184942 99.990 4078 423 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 21:52:06] CVMFS is ok
[2025-10-12 21:52:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:52:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:52:06] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 21:52:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 21:52:06] Further information can be found at the LHC@home message board.
[2025-10-12 21:52:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:52:06] Checking for apptainer binary...
[2025-10-12 21:52:06] apptainer is not installed, using version from CVMFS
[2025-10-12 21:52:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:52:06] X570UD
[2025-10-12 21:52:06] apptainer works
[2025-10-12 21:52:06] Set ATHENA_PROC_NUMBER=4
[2025-10-12 21:52:06] Set ATHENA_CORE_NUMBER=4
[2025-10-12 21:52:06] Starting ATLAS job with PandaID=6840536055
[2025-10-12 21:52:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:30:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:30:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 23:30:35]  replicas=None
[2025-10-12 23:30:35]  scope=mc23_13p6TeV
[2025-10-12 23:30:35]  status=None
[2025-10-12 23:30:35]  status_code=0
[2025-10-12 23:30:35]  storage_token=
[2025-10-12 23:30:35]  surl=/var/lib/boinc3/slots/1/PanDA_Pilot-6840536055/log.46676269._086110.job.log.tgz.1
[2025-10-12 23:30:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/74/log.46676269._086110.job.log.tgz.1
[2025-10-12 23:30:35]  workdir=None
[2025-10-12 23:30:35] ]
[2025-10-12 23:30:35] 2025-10-13 05:29:23,883 | INFO     | transferring file log.46676269._086110.job.log.tgz.1 from /var/lib/boinc3/slots/1/PanDA_Pilot-6840536055/log.46676269._086110.job.log.tgz.1 to /var/lib/boinc3/slot
[2025-10-12 23:30:35] 2025-10-13 05:29:23,884 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc3/slots/1/PanDA_Pilot-6840536055/log.46676269._086110.job.log.tgz.1 /var/lib/boinc3/slots/1/log.46676269._086110.j
[2025-10-12 23:30:35] 2025-10-13 05:29:23,905 | INFO     | adding to output.list: log.46676269._086110.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/74/log.46676269._086110.job.log.tg
[2025-10-12 23:30:35] 2025-10-13 05:29:23,906 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:30:35] 2025-10-13 05:29:23,906 | INFO     | summary of transferred files:
[2025-10-12 23:30:35] 2025-10-13 05:29:23,906 | INFO     |  -- lfn=log.46676269._086110.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:30:35] 2025-10-13 05:29:23,906 | INFO     | stage-out finished correctly
[2025-10-12 23:30:35] 2025-10-13 05:29:23,955 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:30:35] 2025-10-13 05:29:24,307 | INFO     | monitor loop #441: job 0:6840536055 is in state 'finished'
[2025-10-12 23:30:35] 2025-10-13 05:29:24,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:30:35] 2025-10-13 05:29:25,214 | INFO     | time since job start (5826s) is within the limit (172800.0s)
[2025-10-12 23:30:35] 2025-10-13 05:29:25,628 | INFO     | job 6840536055 has state=finished
[2025-10-12 23:30:35] 2025-10-13 05:29:25,628 | INFO     | preparing for final server update for job 6840536055 in state='finished'
[2025-10-12 23:30:35] 2025-10-13 05:29:25,629 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:30:35] 2025-10-13 05:29:25,629 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:30:35] 2025-10-13 05:29:25,629 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:30:35] 2025-10-13 05:29:25,629 | INFO     | job 6840536055 has finished - writing final server update
[2025-10-12 23:30:35] 2025-10-13 05:29:25,629 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:30:35] 2025-10-13 05:29:25,629 | INFO     | executing command: lscpu
[2025-10-12 23:30:35] 2025-10-13 05:29:25,678 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:30:35] 2025-10-13 05:29:26,810 | INFO     | monitor loop #442: job 0:6840536055 is in state 'finished'
[2025-10-12 23:30:35] 2025-10-13 05:29:26,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:30:35] 2025-10-13 05:29:27,220 | INFO     | time since job start (5828s) is within the limit (172800.0s)
[2025-10-12 23:30:35] 2025-10-13 05:29:29,224 | INFO     | time since job start (5830s) is within the limit (172800.0s)
[2025-10-12 23:30:35] 2025-10-13 05:29:29,313 | INFO     | monitor loop #443: job 0:6840536055 is in state 'finished'
[2025-10-12 23:30:35] 2025-10-13 05:29:29,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:30:35] 2025-10-13 05:29:30,182 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:30:35] 2025-10-13 05:29:30,186 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4018.8586250000008
[2025-10-12 23:30:35] 2025-10-13 05:29:30,189 | INFO     | using path: /var/lib/boinc3/slots/1/PanDA_Pilot-6840536055/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:30:35] 2025-10-13 05:29:30,190 | INFO     | extracted standard info from prmon json
[2025-10-12 23:30:35] 2025-10-13 05:29:30,190 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:30:35] 2025-10-13 05:29:30,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:30:35] 2025-10-13 05:29:30,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:30:35] 2025-10-13 05:29:30,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:30:35] 2025-10-13 05:29:30,191 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:30:35] 2025-10-13 05:29:30,191 | INFO     | sum of square deviations: 218571540.0
[2025-10-12 23:30:35] 2025-10-13 05:29:30,191 | INFO     | sum of deviations: -4306824785.0
[2025-10-12 23:30:35] 2025-10-13 05:29:30,191 | INFO     | mean x: 1760330551.0
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | mean y: 2371053.370786517
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | -- intersect: 34688658421.06517
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | intersect: 34688658421.06517
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | chi2: 0.04180196475154593
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | -- intersect: 34688658421.06517
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | current memory leak: -19.70 B/s (using 89 data points, chi2=0.04)
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | could have reported an average CPU frequency of 4095 MHz (7 samples)
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | ..............................
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | . Timing measurements:
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | . get job = 0 s
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | . initial setup = 3 s
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | . payload setup = 5 s
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | . stage-in = 0 s
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | . payload execution = 5800 s
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | . stage-out = 0 s
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | . log creation = 0 s
[2025-10-12 23:30:35] 2025-10-13 05:29:30,192 | INFO     | ..............................
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | 
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | job summary report
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | --------------------------------------------------
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | PanDA job id: 6840536055
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | task id: 46676269
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | errors: (none)
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | pilot state: finished 
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | transexitcode: 0
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | exeerrorcode: 0
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | exeerrordiag: 
[2025-10-12 23:30:35] 2025-10-13 05:29:30,244 | INFO     | exitcode: 0
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | exitmsg: OK
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | cpuconsumptiontime: 22523 s
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | nevents: 400
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | neventsw: 0
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | pid: 137752
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | pgrp: 137752
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | corecount: 4
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | event service: False
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | sizes: {0: 2348858, 4: 2349120, 10: 2349148, 5808: 2375971, 5809: 2385027, 5816: 2385165}
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | --------------------------------------------------
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | 
[2025-10-12 23:30:35] 2025-10-13 05:29:30,245 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/1
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,274 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:30:35] 2025-10-13 05:29:30,275 | INFO     | job 6840536055 has completed (purged errors)
[2025-10-12 23:30:35] 2025-10-13 05:29:30,275 | INFO     | overall cleanup function is called
[2025-10-12 23:30:35] 2025-10-13 05:29:31,281 | INFO     | --- collectZombieJob: --- 10, [137752]
[2025-10-12 23:30:35] 2025-10-13 05:29:31,281 | INFO     | zombie collector waiting for pid 137752
[2025-10-12 23:30:35] 2025-10-13 05:29:31,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:30:35] 2025-10-13 05:29:31,281 | INFO     | collected zombie processes
[2025-10-12 23:30:35] 2025-10-13 05:29:31,281 | INFO     | will attempt to kill all subprocesses of pid=137752
[2025-10-12 23:30:35] 2025-10-13 05:29:31,380 | INFO     | process IDs to be killed: [137752] (in reverse order)
[2025-10-12 23:30:35] 2025-10-13 05:29:31,501 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:30:35] 2025-10-13 05:29:31,501 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:30:35] 2025-10-13 05:29:31,503 | INFO     | did not find any defunct processes belonging to 137752
[2025-10-12 23:30:35] 2025-10-13 05:29:31,506 | INFO     | did not find any defunct processes belonging to 137752
[2025-10-12 23:30:35] 2025-10-13 05:29:31,506 | INFO     | ready for new job
[2025-10-12 23:30:35] 2025-10-13 05:29:31,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:30:35] 2025-10-13 05:29:31,507 | INFO     | ***************************************
[2025-10-12 23:30:35] 2025-10-13 05:29:31,507 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:30:35] 2025-10-13 05:29:31,507 | INFO     | ***************************************
[2025-10-12 23:30:35] 2025-10-13 05:29:31,507 | INFO     | 
[2025-10-12 23:30:35] 2025-10-13 05:29:31,508 | INFO     | architecture information:
[2025-10-12 23:30:35] 2025-10-13 05:29:31,511 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:30:35] 2025-10-13 05:29:31,532 | INFO     | cat /etc/os-release:
[2025-10-12 23:30:35] NAME="CentOS Linux"
[2025-10-12 23:30:35] VERSION="7 (Core)"
[2025-10-12 23:30:35] ID="centos"
[2025-10-12 23:30:35] ID_LIKE="rhel fedora"
[2025-10-12 23:30:35] VERSION_ID="7"
[2025-10-12 23:30:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:30:35] ANSI_COLOR="0;31"
[2025-10-12 23:30:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:30:35] HOME_URL="https://www.centos.org/"
[2025-10-12 23:30:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:30:35] 
[2025-10-12 23:30:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:30:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:30:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:30:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:30:35] 
[2025-10-12 23:30:35] 2025-10-13 05:29:31,532 | INFO     | ***************************************
[2025-10-12 23:30:35] 2025-10-13 05:29:32,034 | INFO     | executing command: df -mP /var/lib/boinc3/slots/1
[2025-10-12 23:30:35] 2025-10-13 05:29:32,055 | INFO     | sufficient remaining disk space (260316332032 B)
[2025-10-12 23:30:35] 2025-10-13 05:29:32,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:30:35] 2025-10-13 05:29:32,056 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:30:35] 2025-10-13 05:29:32,056 | INFO     | update_server=False
[2025-10-12 23:30:35] 2025-10-13 05:29:32,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:30:35] 2025-10-13 05:29:32,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:30:35] 2025-10-13 05:29:32,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:30:35] 2025-10-13 05:29:32,345 | INFO     | all data control threads have been joined
[2025-10-12 23:30:35] 2025-10-13 05:29:32,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:30:35] 2025-10-13 05:29:32,820 | INFO     | aborting loop
[2025-10-12 23:30:35] 2025-10-13 05:29:33,060 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:33,062 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:33,084 | INFO     | all payload control threads have been joined
[2025-10-12 23:30:35] 2025-10-13 05:29:33,268 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:33,351 | INFO     | [data] control thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:33,731 | INFO     | all job control threads have been joined
[2025-10-12 23:30:35] 2025-10-13 05:29:33,766 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:33,825 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:33,949 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:33,960 | INFO     | [job] validate thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:34,062 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:34,077 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:34,089 | INFO     | [payload] control thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:34,111 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:34,116 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:34,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:30:35] 2025-10-13 05:29:34,732 | INFO     | [job] control thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:38,519 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:29:42,587 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:30:35] 2025-10-13 05:29:43,592 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:30:35] 2025-10-13 05:30:02,407 | INFO     | PID=130892 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 23:30:35] 2025-10-13 05:30:02,407 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:30:35] 2025-10-13 05:30:02,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:30:35] 2025-10-13 05:30:02,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:30:35] 2025-10-13 05:30:28,288 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:30:35] 2025-10-13 05:30:30,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123428561635136)>', '<ExcThread(monitor, started 123428073883392)>']
[2025-10-12 23:30:35] 2025-10-13 05:30:30,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:30:35] 2025-10-13 05:30:30,550 | INFO     | [monitor] control thread has ended
[2025-10-12 23:30:35] 2025-10-13 05:30:35,163 | INFO     | all workflow threads have been joined
[2025-10-12 23:30:35] 2025-10-13 05:30:35,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:30:35] 2025-10-13 05:30:35,164 | INFO     | traces error code: 0
[2025-10-12 23:30:35] 2025-10-13 05:30:35,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:30:35] 2025-10-13 05:30:35,216 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:30:35] 2025-10-13 05:30:35,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:30:35] 2025-10-13 05:30:35,224 [wrapper] pilotpid: 130892
[2025-10-12 23:30:35] 2025-10-13 05:30:35,226 [wrapper] Pilot exit status: 0
[2025-10-12 23:30:35] 2025-10-13 05:30:35,235 [wrapper] pandaids: 6840536055
[2025-10-12 23:30:35] 2025-10-13 05:30:35,273 [wrapper] cleanup supervisor_pilot  202181 130893
[2025-10-12 23:30:35] 2025-10-13 05:30:35,281 [wrapper] Test setup, not cleaning
[2025-10-12 23:30:35] 2025-10-13 05:30:35,285 [wrapper] apfmon messages muted
[2025-10-12 23:30:35] 2025-10-13 05:30:35,291 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:30:35] 2025-10-13 05:30:35,296 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:30:35]  *** Error codes and diagnostics ***
[2025-10-12 23:30:35]     "exeErrorCode": 0,
[2025-10-12 23:30:35]     "exeErrorDiag": "",
[2025-10-12 23:30:35]     "pilotErrorCode": 0,
[2025-10-12 23:30:35]     "pilotErrorDiag": "",
[2025-10-12 23:30:35]  *** Listing of results directory ***
[2025-10-12 23:30:35] total 418956
[2025-10-12 23:30:35] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:20 pilot3.tar.gz
[2025-10-12 23:30:35] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:25 queuedata.json
[2025-10-12 23:30:35] -rwx------ 1 boinc boinc     36292 Oct 12 12:26 runpilot2-wrapper.sh
[2025-10-12 23:30:35] -rw-rw-r-- 1 boinc boinc       100 Oct 12 21:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:30:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:52 run_atlas
[2025-10-12 23:30:35] -rw-rw-r-- 1 boinc boinc       105 Oct 12 21:52 job.xml
[2025-10-12 23:30:35] -rw-rw-r-- 1 boinc boinc      9735 Oct 12 21:52 init_data.xml
[2025-10-12 23:30:35] -rw-r--r-- 2 boinc boinc 221980244 Oct 12 21:52 EVNT.46676267._004404.pool.root.1
[2025-10-12 23:30:35] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:52 start_atlas.sh
[2025-10-12 23:30:35] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:52 shared
[2025-10-12 23:30:35] -rw-r--r-- 2 boinc boinc    569680 Oct 12 21:52 input.tar.gz
[2025-10-12 23:30:35] -rw-rw-r-- 1 boinc boinc         0 Oct 12 21:52 boinc_lockfile
[2025-10-12 23:30:35] -rw-rw-r-- 1 boinc boinc      2550 Oct 12 21:52 pandaJob.out
[2025-10-12 23:30:35] -rw------- 1 boinc boinc    974373 Oct 12 21:52 agis_schedconf.cvmfs.json
[2025-10-12 23:30:35] -rw------- 1 boinc boinc   1560580 Oct 12 21:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:30:35] drwx------ 5 boinc boinc      4096 Oct 12 21:52 pilot3
[2025-10-12 23:30:35] -rw------- 1 boinc boinc 200830127 Oct 12 23:29 HITS.46676269._086110.pool.root.1
[2025-10-12 23:30:35] -rw-rw-r-- 1 boinc boinc       529 Oct 12 23:29 boinc_task_state.xml
[2025-10-12 23:30:35] -rw------- 1 boinc boinc        95 Oct 12 23:29 pilot_heartbeat.json
[2025-10-12 23:30:35] -rw------- 1 boinc boinc      1018 Oct 12 23:29 memory_monitor_summary.json
[2025-10-12 23:30:35] -rw------- 1 boinc boinc    283774 Oct 12 23:29 log.46676269._086110.job.log.tgz.1
[2025-10-12 23:30:35] -rw------- 1 boinc boinc      7741 Oct 12 23:29 heartbeat.json
[2025-10-12 23:30:35] -rw-rw-r-- 1 boinc boinc      8192 Oct 12 23:30 boinc_mmap_file
[2025-10-12 23:30:35] -rw-rw-r-- 1 boinc boinc        27 Oct 12 23:30 wrapper_checkpoint.txt
[2025-10-12 23:30:35] -rw------- 1 boinc boinc      4821 Oct 12 23:30 pilotlog.txt
[2025-10-12 23:30:35] -rw------- 1 boinc boinc    862528 Oct 12 23:30 log.46676269._086110.job.log.1
[2025-10-12 23:30:35] -rw------- 1 boinc boinc       357 Oct 12 23:30 output.list
[2025-10-12 23:30:35] -rw-rw-r-- 1 boinc boinc       620 Oct 12 23:30 runtime_log
[2025-10-12 23:30:35] -rw------- 1 boinc boinc   1167360 Oct 12 23:30 result.tar.gz
[2025-10-12 23:30:35] -rw------- 1 boinc boinc       653 Oct 12 23:30 TQ7KDmqwFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmU3kNDmnK62Vn.diag
[2025-10-12 23:30:35] -rw-rw-r-- 1 boinc boinc      8699 Oct 12 23:30 runtime_log.err
[2025-10-12 23:30:35] -rw-rw-r-- 1 boinc boinc     22032 Oct 12 23:30 stderr.txt
[2025-10-12 23:30:35] HITS file was successfully produced:
[2025-10-12 23:30:35] -rw------- 1 boinc boinc 200830127 Oct 12 23:29 shared/HITS.pool.root.1
[2025-10-12 23:30:35]  *** Contents of shared directory: ***
[2025-10-12 23:30:35] total 414628
[2025-10-12 23:30:35] -rw-r--r-- 2 boinc boinc 221980244 Oct 12 21:52 ATLAS.root_0
[2025-10-12 23:30:35] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:52 start_atlas.sh
[2025-10-12 23:30:35] -rw-r--r-- 2 boinc boinc    569680 Oct 12 21:52 input.tar.gz
[2025-10-12 23:30:35] -rw------- 1 boinc boinc 200830127 Oct 12 23:29 HITS.pool.root.1
[2025-10-12 23:30:35] -rw------- 1 boinc boinc   1167360 Oct 12 23:30 result.tar.gz
23:30:37 (126953): run_atlas exited; CPU time 22565.155555
23:30:37 (126953): called boinc_finish(0)

</stderr_txt>
]]>

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