Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:32:35 (32185): wrapper (7.7.26015): starting
17:32:35 (32185): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:32:35] Arguments: --nthreads 8
[2025-10-12 17:32:35] Threads: 8
[2025-10-12 17:32:35] Checking for CVMFS
[2025-10-12 17:32:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:32:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:32:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:32:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:32:35] 2.11.2.0 12540 53411 125252 151638 3 187 15999878 18432000 1765 130560 0 48912991 99.976 2402032 38154 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:32:35] CVMFS is ok
[2025-10-12 17:32:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:32:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:32:35] Further information can be found at the LHC@home message board.
[2025-10-12 17:32:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:32:35] Checking for apptainer binary...
[2025-10-12 17:32:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:32:35] Running /usr/bin/apptainer --version
[2025-10-12 17:32:35] apptainer version 1.3.2-1.el7
[2025-10-12 17:32:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:32:36] c-206-17.aglt2.org
[2025-10-12 17:32:36] apptainer works
[2025-10-12 17:32:36] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:32:36] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:32:36] Starting ATLAS job with PandaID=6840715301
[2025-10-12 17:32:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:41:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:41:10] 2025-10-13 00:40:26,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:41:10] 2025-10-13 00:40:26,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:41:10] 2025-10-13 00:40:26,498 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:41:10] 2025-10-13 00:40:26,498 | INFO     | sum of square deviations: 1963274020.0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,499 | INFO     | sum of deviations: 9654383745.99999
[2025-10-12 20:41:10] 2025-10-13 00:40:26,499 | INFO     | mean x: 1760310402.0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,499 | INFO     | mean y: 2471142.237837838
[2025-10-12 20:41:10] 2025-10-13 00:40:26,499 | INFO     | -- intersect: -8653840691.90109
[2025-10-12 20:41:10] 2025-10-13 00:40:26,500 | INFO     | intersect: -8653840691.90109
[2025-10-12 20:41:10] 2025-10-13 00:40:26,500 | INFO     | chi2: 2.1006620359819754
[2025-10-12 20:41:10] 2025-10-13 00:40:26,500 | INFO     | sum of square deviations: 1808350185.0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,501 | INFO     | sum of deviations: 21779744450.999996
[2025-10-12 20:41:10] 2025-10-13 00:40:26,501 | INFO     | mean x: 1760310249.5
[2025-10-12 20:41:10] 2025-10-13 00:40:26,501 | INFO     | mean y: 2482807.388888889
[2025-10-12 20:41:10] 2025-10-13 00:40:26,501 | INFO     | -- intersect: -21198669329.295326
[2025-10-12 20:41:10] 2025-10-13 00:40:26,502 | INFO     | intersect: -21198669329.295326
[2025-10-12 20:41:10] 2025-10-13 00:40:26,502 | INFO     | chi2: 1.2835514409894184
[2025-10-12 20:41:10] 2025-10-13 00:40:26,502 | INFO     | current chi2=1.2835514409894184 (change=38.897765608954344 %)
[2025-10-12 20:41:10] 2025-10-13 00:40:26,502 | INFO     | sum of square deviations: 1661798600.0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,503 | INFO     | sum of deviations: 21139728912.999992
[2025-10-12 20:41:10] 2025-10-13 00:40:26,503 | INFO     | mean x: 1760310097.0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,503 | INFO     | mean y: 2482141.6914285715
[2025-10-12 20:41:10] 2025-10-13 00:40:26,503 | INFO     | -- intersect: -22390410867.96493
[2025-10-12 20:41:10] 2025-10-13 00:40:26,503 | INFO     | intersect: -22390410867.96493
[2025-10-12 20:41:10] 2025-10-13 00:40:26,504 | INFO     | chi2: 1.2843738046198196
[2025-10-12 20:41:10] 2025-10-13 00:40:26,504 | INFO     | current chi2=1.2843738046198196 (change=-0.06406939403747694 %)
[2025-10-12 20:41:10] 2025-10-13 00:40:26,504 | INFO     | right removable region: 174
[2025-10-12 20:41:10] 2025-10-13 00:40:26,504 | INFO     | sum of square deviations: 1808350185.0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,505 | INFO     | sum of deviations: -14762230488.500004
[2025-10-12 20:41:10] 2025-10-13 00:40:26,505 | INFO     | mean x: 1760310554.5
[2025-10-12 20:41:10] 2025-10-13 00:40:26,505 | INFO     | mean y: 2494875.283333333
[2025-10-12 20:41:10] 2025-10-13 00:40:26,505 | INFO     | -- intersect: 14372560116.19697
[2025-10-12 20:41:10] 2025-10-13 00:40:26,505 | INFO     | intersect: 14372560116.19697
[2025-10-12 20:41:10] 2025-10-13 00:40:26,506 | INFO     | chi2: 0.8977921504907017
[2025-10-12 20:41:10] 2025-10-13 00:40:26,506 | INFO     | current chi2=0.8977921504907017 (change=57.2614663800015 %)
[2025-10-12 20:41:10] 2025-10-13 00:40:26,506 | INFO     | sum of square deviations: 1661798600.0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,507 | INFO     | sum of deviations: -18477210856.0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,507 | INFO     | mean x: 1760310707.0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,507 | INFO     | mean y: 2498686.9714285713
[2025-10-12 20:41:10] 2025-10-13 00:40:26,507 | INFO     | -- intersect: 19575046229.924847
[2025-10-12 20:41:10] 2025-10-13 00:40:26,507 | INFO     | intersect: 19575046229.924847
[2025-10-12 20:41:10] 2025-10-13 00:40:26,507 | INFO     | chi2: 0.8619567059964462
[2025-10-12 20:41:10] 2025-10-13 00:40:26,508 | INFO     | current chi2=0.8619567059964462 (change=3.9915078868387375 %)
[2025-10-12 20:41:10] 2025-10-13 00:40:26,508 | INFO     | left removable region: 20
[2025-10-12 20:41:10] 2025-10-13 00:40:26,508 | INFO     | sum of square deviations: 1132458442.5
[2025-10-12 20:41:10] 2025-10-13 00:40:26,509 | INFO     | sum of deviations: -2492797146.999998
[2025-10-12 20:41:10] 2025-10-13 00:40:26,509 | INFO     | mean x: 1760310676.5
[2025-10-12 20:41:10] 2025-10-13 00:40:26,509 | INFO     | mean y: 2507386.1688311687
[2025-10-12 20:41:10] 2025-10-13 00:40:26,509 | INFO     | -- intersect: 3877349294.2972493
[2025-10-12 20:41:10] 2025-10-13 00:40:26,509 | INFO     | intersect: 3877349294.2972493
[2025-10-12 20:41:10] 2025-10-13 00:40:26,509 | INFO     | chi2: 0.01821631129361893
[2025-10-12 20:41:10] 2025-10-13 00:40:26,509 | INFO     | -- intersect: 3877349294.2972493
[2025-10-12 20:41:10] 2025-10-13 00:40:26,510 | INFO     | current memory leak: -2.20 B/s (using 154 data points, chi2=0.02)
[2025-10-12 20:41:10] 2025-10-13 00:40:26,510 | INFO     | could have reported an average CPU frequency of 2423 MHz (10 samples)
[2025-10-12 20:41:10] 2025-10-13 00:40:26,510 | INFO     | ..............................
[2025-10-12 20:41:10] 2025-10-13 00:40:26,510 | INFO     | . Timing measurements:
[2025-10-12 20:41:10] 2025-10-13 00:40:26,510 | INFO     | . get job = 0 s
[2025-10-12 20:41:10] 2025-10-13 00:40:26,510 | INFO     | . initial setup = 2 s
[2025-10-12 20:41:10] 2025-10-13 00:40:26,510 | INFO     | . payload setup = 4 s
[2025-10-12 20:41:10] 2025-10-13 00:40:26,511 | INFO     | . stage-in = 0 s
[2025-10-12 20:41:10] 2025-10-13 00:40:26,511 | INFO     | . payload execution = 11228 s
[2025-10-12 20:41:10] 2025-10-13 00:40:26,511 | INFO     | . stage-out = 1 s
[2025-10-12 20:41:10] 2025-10-13 00:40:26,511 | INFO     | . log creation = 0 s
[2025-10-12 20:41:10] 2025-10-13 00:40:26,511 | INFO     | ..............................
[2025-10-12 20:41:10] 2025-10-13 00:40:26,592 | INFO     | 
[2025-10-12 20:41:10] 2025-10-13 00:40:26,592 | INFO     | job summary report
[2025-10-12 20:41:10] 2025-10-13 00:40:26,592 | INFO     | --------------------------------------------------
[2025-10-12 20:41:10] 2025-10-13 00:40:26,593 | INFO     | PanDA job id: 6840715301
[2025-10-12 20:41:10] 2025-10-13 00:40:26,593 | INFO     | task id: 46676269
[2025-10-12 20:41:10] 2025-10-13 00:40:26,593 | INFO     | errors: (none)
[2025-10-12 20:41:10] 2025-10-13 00:40:26,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:41:10] 2025-10-13 00:40:26,593 | INFO     | pilot state: finished 
[2025-10-12 20:41:10] 2025-10-13 00:40:26,593 | INFO     | transexitcode: 0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,593 | INFO     | exeerrorcode: 0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,593 | INFO     | exeerrordiag: 
[2025-10-12 20:41:10] 2025-10-13 00:40:26,593 | INFO     | exitcode: 0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,593 | INFO     | exitmsg: OK
[2025-10-12 20:41:10] 2025-10-13 00:40:26,594 | INFO     | cpuconsumptiontime: 84739 s
[2025-10-12 20:41:10] 2025-10-13 00:40:26,594 | INFO     | nevents: 400
[2025-10-12 20:41:10] 2025-10-13 00:40:26,594 | INFO     | neventsw: 0
[2025-10-12 20:41:10] 2025-10-13 00:40:26,594 | INFO     | pid: 10101
[2025-10-12 20:41:10] 2025-10-13 00:40:26,594 | INFO     | pgrp: 10101
[2025-10-12 20:41:10] 2025-10-13 00:40:26,594 | INFO     | corecount: 8
[2025-10-12 20:41:10] 2025-10-13 00:40:26,594 | INFO     | event service: False
[2025-10-12 20:41:10] 2025-10-13 00:40:26,594 | INFO     | sizes: {0: 2348806, 3: 2349068, 11: 2349096, 11236: 2378426, 11238: 2387424, 11240: 2387480, 11245: 2387802}
[2025-10-12 20:41:10] 2025-10-13 00:40:26,594 | INFO     | --------------------------------------------------
[2025-10-12 20:41:10] 2025-10-13 00:40:26,594 | INFO     | 
[2025-10-12 20:41:10] 2025-10-13 00:40:26,595 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 20:41:10] 2025-10-13 00:40:26,609 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:41:10] 2025-10-13 00:40:26,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,612 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:41:10] 2025-10-13 00:40:26,612 | INFO     | job 6840715301 has completed (purged errors)
[2025-10-12 20:41:10] 2025-10-13 00:40:26,612 | INFO     | overall cleanup function is called
[2025-10-12 20:41:10] 2025-10-13 00:40:27,614 | INFO     | --- collectZombieJob: --- 10, [10101]
[2025-10-12 20:41:10] 2025-10-13 00:40:27,615 | INFO     | zombie collector waiting for pid 10101
[2025-10-12 20:41:10] 2025-10-13 00:40:27,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:41:10] 2025-10-13 00:40:27,615 | INFO     | collected zombie processes
[2025-10-12 20:41:10] 2025-10-13 00:40:27,615 | INFO     | will attempt to kill all subprocesses of pid=10101
[2025-10-12 20:41:10] 2025-10-13 00:40:27,720 | INFO     | process IDs to be killed: [10101] (in reverse order)
[2025-10-12 20:41:10] 2025-10-13 00:40:27,757 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:41:10] 2025-10-13 00:40:27,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:41:10] 2025-10-13 00:40:27,760 | INFO     | did not find any defunct processes belonging to 10101
[2025-10-12 20:41:10] 2025-10-13 00:40:27,762 | INFO     | did not find any defunct processes belonging to 10101
[2025-10-12 20:41:10] 2025-10-13 00:40:27,763 | INFO     | ready for new job
[2025-10-12 20:41:10] 2025-10-13 00:40:27,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:41:10] 2025-10-13 00:40:27,764 | INFO     | ***************************************
[2025-10-12 20:41:10] 2025-10-13 00:40:27,765 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:41:10] 2025-10-13 00:40:27,765 | INFO     | ***************************************
[2025-10-12 20:41:10] 2025-10-13 00:40:27,765 | INFO     | 
[2025-10-12 20:41:10] 2025-10-13 00:40:27,766 | INFO     | architecture information:
[2025-10-12 20:41:10] 2025-10-13 00:40:27,766 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:41:10] 2025-10-13 00:40:27,776 | INFO     | cat /etc/os-release:
[2025-10-12 20:41:10] NAME="CentOS Linux"
[2025-10-12 20:41:10] VERSION="7 (Core)"
[2025-10-12 20:41:10] ID="centos"
[2025-10-12 20:41:10] ID_LIKE="rhel fedora"
[2025-10-12 20:41:10] VERSION_ID="7"
[2025-10-12 20:41:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:41:10] ANSI_COLOR="0;31"
[2025-10-12 20:41:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:41:10] HOME_URL="https://www.centos.org/"
[2025-10-12 20:41:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:41:10] 
[2025-10-12 20:41:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:41:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:41:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:41:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:41:10] 
[2025-10-12 20:41:10] 2025-10-13 00:40:27,777 | INFO     | ***************************************
[2025-10-12 20:41:10] 2025-10-13 00:40:28,280 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 20:41:10] 2025-10-13 00:40:28,292 | INFO     | sufficient remaining disk space (28085059584 B)
[2025-10-12 20:41:10] 2025-10-13 00:40:28,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:41:10] 2025-10-13 00:40:28,292 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:41:10] 2025-10-13 00:40:28,292 | INFO     | update_server=False
[2025-10-12 20:41:10] 2025-10-13 00:40:28,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:41:10] 2025-10-13 00:40:28,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:41:10] 2025-10-13 00:40:28,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:41:10] 2025-10-13 00:40:28,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:41:10] 2025-10-13 00:40:28,309 | INFO     | all data control threads have been joined
[2025-10-12 20:41:10] 2025-10-13 00:40:28,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:41:10] 2025-10-13 00:40:28,616 | INFO     | aborting loop
[2025-10-12 20:41:10] 2025-10-13 00:40:28,815 | INFO     | all payload control threads have been joined
[2025-10-12 20:41:10] 2025-10-13 00:40:29,298 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:29,298 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:29,315 | INFO     | [data] control thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:29,610 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:29,622 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:29,821 | INFO     | [payload] control thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:29,825 | INFO     | [job] validate thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:29,827 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:29,834 | INFO     | all job control threads have been joined
[2025-10-12 20:41:10] 2025-10-13 00:40:29,853 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:29,972 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:30,207 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:30,298 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:30,555 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:30,839 | INFO     | [job] control thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:32,300 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:39,215 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:41:10] 2025-10-13 00:40:40,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:41:10] 2025-10-13 00:40:59,411 | INFO     | PID=3577 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 20:41:10] 2025-10-13 00:40:59,411 | INFO     | .. there are 3 such processes running
[2025-10-12 20:41:10] 2025-10-13 00:40:59,412 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:41:10] 2025-10-13 00:40:59,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:41:10] 2025-10-13 00:40:59,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:41:10] 2025-10-13 00:41:05,021 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:41:10] 2025-10-13 00:41:05,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276063418176)>', '<ExcThread(monitor, started 140275603187456)>']
[2025-10-12 20:41:10] 2025-10-13 00:41:06,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:41:10] 2025-10-13 00:41:06,447 | INFO     | [monitor] control thread has ended
[2025-10-12 20:41:10] 2025-10-13 00:41:10,635 | INFO     | all workflow threads have been joined
[2025-10-12 20:41:10] 2025-10-13 00:41:10,636 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:41:10] 2025-10-13 00:41:10,636 | INFO     | traces error code: 0
[2025-10-12 20:41:10] 2025-10-13 00:41:10,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:41:10] 2025-10-13 00:41:10,743 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:41:10] 2025-10-13 00:41:10,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:41:10] 2025-10-13 00:41:10,748 [wrapper] pilotpid: 3577
[2025-10-12 20:41:10] 2025-10-13 00:41:10,751 [wrapper] Pilot exit status: 0
[2025-10-12 20:41:10] 2025-10-13 00:41:10,759 [wrapper] pandaids: 6840715301
[2025-10-12 20:41:10] 2025-10-13 00:41:10,792 [wrapper] cleanup supervisor_pilot 13733 3578
[2025-10-12 20:41:10] 2025-10-13 00:41:10,795 [wrapper] Test setup, not cleaning
[2025-10-12 20:41:10] 2025-10-13 00:41:10,797 [wrapper] apfmon messages muted
[2025-10-12 20:41:10] 2025-10-13 00:41:10,799 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:41:10] 2025-10-13 00:41:10,801 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:41:10]  *** Error codes and diagnostics ***
[2025-10-12 20:41:10]     "exeErrorCode": 0,
[2025-10-12 20:41:10]     "exeErrorDiag": "",
[2025-10-12 20:41:10]     "pilotErrorCode": 0,
[2025-10-12 20:41:10]     "pilotErrorDiag": "",
[2025-10-12 20:41:10]  *** Listing of results directory ***
[2025-10-12 20:41:10] total 418596
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:03 queuedata.json
[2025-10-12 20:41:10] -rwx------ 1 boincer umatlas     36292 Oct 12 16:04 runpilot2-wrapper.sh
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas       100 Oct 12 17:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:41:10] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 17:32 run_atlas
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas       105 Oct 12 17:32 job.xml
[2025-10-12 20:41:10] -rw-r--r-- 2 boincer umatlas 219464889 Oct 12 17:32 EVNT.46676267._004484.pool.root.1
[2025-10-12 20:41:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:32 start_atlas.sh
[2025-10-12 20:41:10] drwxrwx--x 2 boincer umatlas      4096 Oct 12 17:32 shared
[2025-10-12 20:41:10] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 17:32 input.tar.gz
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas         0 Oct 12 17:32 boinc_lockfile
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 17:32 pandaJob.out
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas    975528 Oct 12 17:32 agis_schedconf.cvmfs.json
[2025-10-12 20:41:10] drwx------ 5 boincer umatlas      4096 Oct 12 17:32 pilot3
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 20:38 init_data.xml
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas 201235169 Oct 12 20:39 HITS.46676269._088253.pool.root.1
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas       531 Oct 12 20:39 boinc_task_state.xml
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas      1052 Oct 12 20:40 memory_monitor_summary.json
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas   1560580 Oct 12 20:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas    434274 Oct 12 20:40 log.46676269._088253.job.log.tgz.1
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas      7854 Oct 12 20:40 heartbeat.json
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 20:40 boinc_mmap_file
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas        28 Oct 12 20:40 wrapper_checkpoint.txt
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas        95 Oct 12 20:40 pilot_heartbeat.json
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas      4892 Oct 12 20:41 pilotlog.txt
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas   1583649 Oct 12 20:41 log.46676269._088253.job.log.1
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas       357 Oct 12 20:41 output.list
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas       620 Oct 12 20:41 runtime_log
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas   2037760 Oct 12 20:41 result.tar.gz
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas       661 Oct 12 20:41 SY0KDm8THS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhNlNDmgkKvCn.diag
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 20:41 runtime_log.err
[2025-10-12 20:41:10] -rw-r--r-- 1 boincer umatlas     20866 Oct 12 20:41 stderr.txt
[2025-10-12 20:41:10] HITS file was successfully produced:
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas 201235169 Oct 12 20:39 shared/HITS.pool.root.1
[2025-10-12 20:41:10]  *** Contents of shared directory: ***
[2025-10-12 20:41:10] total 413416
[2025-10-12 20:41:10] -rw-r--r-- 2 boincer umatlas 219464889 Oct 12 17:32 ATLAS.root_0
[2025-10-12 20:41:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:32 start_atlas.sh
[2025-10-12 20:41:10] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 17:32 input.tar.gz
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas 201235169 Oct 12 20:39 HITS.pool.root.1
[2025-10-12 20:41:10] -rw------- 1 boincer umatlas   2037760 Oct 12 20:41 result.tar.gz
20:41:11 (32185): run_atlas exited; CPU time 84874.602278
20:41:11 (32185): called boinc_finish(0)

</stderr_txt>
]]>

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