Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:37:06 (28498): wrapper (7.7.26015): starting
17:37:06 (28498): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 17:37:06] Arguments: --nthreads 12
[2025-10-12 17:37:06] Threads: 12
[2025-10-12 17:37:06] Checking for CVMFS
[2025-10-12 17:37:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:37:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:37:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:37:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:37:06] 2.11.2.0 723 53378 84548 151638 2 56 13737323 20275201 1 130560 0 30180889 99.957 2403701 32876 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:37:06] CVMFS is ok
[2025-10-12 17:37:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:37:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:37:06] Further information can be found at the LHC@home message board.
[2025-10-12 17:37:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:37:06] Checking for apptainer binary...
[2025-10-12 17:37:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:37:06] Running /usr/bin/apptainer --version
[2025-10-12 17:37:06] apptainer version 1.3.2-1.el7
[2025-10-12 17:37:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:37:08] c-205-1.aglt2.org
[2025-10-12 17:37:08] apptainer works
[2025-10-12 17:37:08] Set ATHENA_PROC_NUMBER=12
[2025-10-12 17:37:08] Set ATHENA_CORE_NUMBER=12
[2025-10-12 17:37:08] Starting ATLAS job with PandaID=6840531124
[2025-10-12 17:37:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:49:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:49:35]  status=None
[2025-10-12 18:49:35]  status_code=0
[2025-10-12 18:49:35]  storage_token=
[2025-10-12 18:49:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840531124/log.46676269._085566.job.log.tgz.1
[2025-10-12 18:49:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/41/log.46676269._085566.job.log.tgz.1
[2025-10-12 18:49:35]  workdir=None
[2025-10-12 18:49:35] ]
[2025-10-12 18:49:35] 2025-10-12 22:48:54,847 | INFO     | transferring file log.46676269._085566.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840531124/log.46676269._085566.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 18:49:35] 2025-10-12 22:48:54,848 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840531124/log.46676269._085566.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._085566.job
[2025-10-12 18:49:35] 2025-10-12 22:48:54,870 | INFO     | adding to output.list: log.46676269._085566.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/41/log.46676269._085566.job.log.tg
[2025-10-12 18:49:35] 2025-10-12 22:48:54,870 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 18:49:35] 2025-10-12 22:48:54,870 | INFO     | summary of transferred files:
[2025-10-12 18:49:35] 2025-10-12 22:48:54,871 | INFO     |  -- lfn=log.46676269._085566.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 18:49:35] 2025-10-12 22:48:54,871 | INFO     | stage-out finished correctly
[2025-10-12 18:49:35] 2025-10-12 22:48:54,954 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 18:49:35] 2025-10-12 22:48:55,109 | WARNING  | process 8181 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 18:49:35] 2025-10-12 22:48:55,109 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840531124/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:49:35] 2025-10-12 22:48:55,197 | INFO     | number of running child processes to parent process 8181: 1
[2025-10-12 18:49:35] 2025-10-12 22:48:55,198 | INFO     | maximum number of monitored processes: 6
[2025-10-12 18:49:35] 2025-10-12 22:48:55,344 | INFO     | time since job start (4292s) is within the limit (172800.0s)
[2025-10-12 18:49:35] 2025-10-12 22:48:57,350 | INFO     | time since job start (4294s) is within the limit (172800.0s)
[2025-10-12 18:49:35] 2025-10-12 22:48:57,375 | INFO     | job 6840531124 has state=finished
[2025-10-12 18:49:35] 2025-10-12 22:48:57,375 | INFO     | preparing for final server update for job 6840531124 in state='finished'
[2025-10-12 18:49:35] 2025-10-12 22:48:57,376 | INFO     | this job has now completed (state=finished)
[2025-10-12 18:49:35] 2025-10-12 22:48:57,376 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 18:49:35] 2025-10-12 22:48:57,376 | INFO     | log transfer has been attempted: DONE
[2025-10-12 18:49:35] 2025-10-12 22:48:57,376 | INFO     | job 6840531124 has finished - writing final server update
[2025-10-12 18:49:35] 2025-10-12 22:48:57,376 | INFO     | total number of processed events: 400 (read)
[2025-10-12 18:49:35] 2025-10-12 22:48:57,377 | INFO     | executing command: lscpu
[2025-10-12 18:49:35] 2025-10-12 22:48:57,400 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 18:49:35] 2025-10-12 22:48:57,701 | INFO     | monitor loop #319: job 0:6840531124 is in state 'finished'
[2025-10-12 18:49:35] 2025-10-12 22:48:57,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:49:35] 2025-10-12 22:48:59,355 | INFO     | time since job start (4296s) is within the limit (172800.0s)
[2025-10-12 18:49:35] 2025-10-12 22:49:00,204 | INFO     | monitor loop #320: job 0:6840531124 is in state 'finished'
[2025-10-12 18:49:35] 2025-10-12 22:49:00,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:49:35] 2025-10-12 22:49:01,360 | INFO     | time since job start (4298s) is within the limit (172800.0s)
[2025-10-12 18:49:35] 2025-10-12 22:49:02,070 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 18:49:35] 2025-10-12 22:49:02,074 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 18:49:35] 2025-10-12 22:49:02,077 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840531124/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:49:35] 2025-10-12 22:49:02,077 | INFO     | extracted standard info from prmon json
[2025-10-12 18:49:35] 2025-10-12 22:49:02,077 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:49:35] 2025-10-12 22:49:02,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:49:35] 2025-10-12 22:49:02,078 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:49:35] 2025-10-12 22:49:02,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:49:35] 2025-10-12 22:49:02,079 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:49:35] 2025-10-12 22:49:02,079 | INFO     | sum of square deviations: 77515872.0
[2025-10-12 18:49:35] 2025-10-12 22:49:02,080 | INFO     | sum of deviations: -6951374072.0
[2025-10-12 18:49:35] 2025-10-12 22:49:02,080 | INFO     | mean x: 1760307268.0
[2025-10-12 18:49:35] 2025-10-12 22:49:02,080 | INFO     | mean y: 2762091.507936508
[2025-10-12 18:49:35] 2025-10-12 22:49:02,080 | INFO     | -- intersect: 157861455876.5479
[2025-10-12 18:49:35] 2025-10-12 22:49:02,080 | INFO     | intersect: 157861455876.5479
[2025-10-12 18:49:35] 2025-10-12 22:49:02,080 | INFO     | chi2: 0.05363843241255187
[2025-10-12 18:49:35] 2025-10-12 22:49:02,081 | INFO     | -- intersect: 157861455876.5479
[2025-10-12 18:49:35] 2025-10-12 22:49:02,081 | INFO     | current memory leak: -89.68 B/s (using 63 data points, chi2=0.05)
[2025-10-12 18:49:35] 2025-10-12 22:49:02,081 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-12 18:49:35] 2025-10-12 22:49:02,081 | INFO     | ..............................
[2025-10-12 18:49:35] 2025-10-12 22:49:02,081 | INFO     | . Timing measurements:
[2025-10-12 18:49:35] 2025-10-12 22:49:02,081 | INFO     | . get job = 0 s
[2025-10-12 18:49:35] 2025-10-12 22:49:02,081 | INFO     | . initial setup = 2 s
[2025-10-12 18:49:35] 2025-10-12 22:49:02,082 | INFO     | . payload setup = 7 s
[2025-10-12 18:49:35] 2025-10-12 22:49:02,082 | INFO     | . stage-in = 0 s
[2025-10-12 18:49:35] 2025-10-12 22:49:02,082 | INFO     | . payload execution = 4264 s
[2025-10-12 18:49:35] 2025-10-12 22:49:02,082 | INFO     | . stage-out = 0 s
[2025-10-12 18:49:35] 2025-10-12 22:49:02,082 | INFO     | . log creation = 0 s
[2025-10-12 18:49:35] 2025-10-12 22:49:02,082 | INFO     | ..............................
[2025-10-12 18:49:35] 2025-10-12 22:49:02,291 | INFO     | 
[2025-10-12 18:49:35] 2025-10-12 22:49:02,291 | INFO     | job summary report
[2025-10-12 18:49:35] 2025-10-12 22:49:02,291 | INFO     | --------------------------------------------------
[2025-10-12 18:49:35] 2025-10-12 22:49:02,291 | INFO     | PanDA job id: 6840531124
[2025-10-12 18:49:35] 2025-10-12 22:49:02,291 | INFO     | task id: 46676269
[2025-10-12 18:49:35] 2025-10-12 22:49:02,292 | INFO     | errors: (none)
[2025-10-12 18:49:35] 2025-10-12 22:49:02,292 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:49:35] 2025-10-12 22:49:02,292 | INFO     | pilot state: finished 
[2025-10-12 18:49:35] 2025-10-12 22:49:02,292 | INFO     | transexitcode: 0
[2025-10-12 18:49:35] 2025-10-12 22:49:02,292 | INFO     | exeerrorcode: 0
[2025-10-12 18:49:35] 2025-10-12 22:49:02,292 | INFO     | exeerrordiag: 
[2025-10-12 18:49:35] 2025-10-12 22:49:02,292 | INFO     | exitcode: 0
[2025-10-12 18:49:35] 2025-10-12 22:49:02,292 | INFO     | exitmsg: OK
[2025-10-12 18:49:35] 2025-10-12 22:49:02,292 | INFO     | cpuconsumptiontime: 46571 s
[2025-10-12 18:49:35] 2025-10-12 22:49:02,292 | INFO     | nevents: 400
[2025-10-12 18:49:35] 2025-10-12 22:49:02,293 | INFO     | neventsw: 0
[2025-10-12 18:49:35] 2025-10-12 22:49:02,293 | INFO     | pid: 8181
[2025-10-12 18:49:35] 2025-10-12 22:49:02,293 | INFO     | pgrp: 8181
[2025-10-12 18:49:35] 2025-10-12 22:49:02,293 | INFO     | corecount: 12
[2025-10-12 18:49:35] 2025-10-12 22:49:02,293 | INFO     | event service: False
[2025-10-12 18:49:35] 2025-10-12 22:49:02,293 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4274: 2375222, 4275: 2384276, 4282: 2384414}
[2025-10-12 18:49:35] 2025-10-12 22:49:02,293 | INFO     | --------------------------------------------------
[2025-10-12 18:49:35] 2025-10-12 22:49:02,293 | INFO     | 
[2025-10-12 18:49:35] 2025-10-12 22:49:02,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:49:35] 2025-10-12 22:49:02,317 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,318 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,318 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,318 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,320 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,320 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,320 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,320 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,321 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:49:35] 2025-10-12 22:49:02,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,321 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:49:35] 2025-10-12 22:49:02,321 | INFO     | job 6840531124 has completed (purged errors)
[2025-10-12 18:49:35] 2025-10-12 22:49:02,321 | INFO     | overall cleanup function is called
[2025-10-12 18:49:35] 2025-10-12 22:49:03,330 | INFO     | --- collectZombieJob: --- 10, [8181]
[2025-10-12 18:49:35] 2025-10-12 22:49:03,330 | INFO     | zombie collector waiting for pid 8181
[2025-10-12 18:49:35] 2025-10-12 22:49:03,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:49:35] 2025-10-12 22:49:03,330 | INFO     | collected zombie processes
[2025-10-12 18:49:35] 2025-10-12 22:49:03,331 | INFO     | will attempt to kill all subprocesses of pid=8181
[2025-10-12 18:49:35] 2025-10-12 22:49:03,424 | INFO     | process IDs to be killed: [8181] (in reverse order)
[2025-10-12 18:49:35] 2025-10-12 22:49:03,481 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:49:35] 2025-10-12 22:49:03,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:49:35] 2025-10-12 22:49:03,485 | INFO     | did not find any defunct processes belonging to 8181
[2025-10-12 18:49:35] 2025-10-12 22:49:03,488 | INFO     | did not find any defunct processes belonging to 8181
[2025-10-12 18:49:35] 2025-10-12 22:49:03,488 | INFO     | ready for new job
[2025-10-12 18:49:35] 2025-10-12 22:49:03,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:49:35] 2025-10-12 22:49:03,489 | INFO     | ***************************************
[2025-10-12 18:49:35] 2025-10-12 22:49:03,489 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:49:35] 2025-10-12 22:49:03,490 | INFO     | ***************************************
[2025-10-12 18:49:35] 2025-10-12 22:49:03,490 | INFO     | 
[2025-10-12 18:49:35] 2025-10-12 22:49:03,490 | INFO     | architecture information:
[2025-10-12 18:49:35] 2025-10-12 22:49:03,491 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:49:35] 2025-10-12 22:49:03,507 | INFO     | cat /etc/os-release:
[2025-10-12 18:49:35] NAME="CentOS Linux"
[2025-10-12 18:49:35] VERSION="7 (Core)"
[2025-10-12 18:49:35] ID="centos"
[2025-10-12 18:49:35] ID_LIKE="rhel fedora"
[2025-10-12 18:49:35] VERSION_ID="7"
[2025-10-12 18:49:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:49:35] ANSI_COLOR="0;31"
[2025-10-12 18:49:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:49:35] HOME_URL="https://www.centos.org/"
[2025-10-12 18:49:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:49:35] 
[2025-10-12 18:49:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:49:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:49:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:49:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:49:35] 
[2025-10-12 18:49:35] 2025-10-12 22:49:03,507 | INFO     | ***************************************
[2025-10-12 18:49:35] 2025-10-12 22:49:04,011 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:49:35] 2025-10-12 22:49:04,028 | INFO     | sufficient remaining disk space (29489102848 B)
[2025-10-12 18:49:35] 2025-10-12 22:49:04,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:49:35] 2025-10-12 22:49:04,028 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:49:35] 2025-10-12 22:49:04,028 | INFO     | update_server=False
[2025-10-12 18:49:35] 2025-10-12 22:49:04,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:49:35] 2025-10-12 22:49:04,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:49:35] 2025-10-12 22:49:04,029 | INFO     | aborting loop
[2025-10-12 18:49:35] 2025-10-12 22:49:04,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:49:35] 2025-10-12 22:49:04,150 | INFO     | all data control threads have been joined
[2025-10-12 18:49:35] 2025-10-12 22:49:04,492 | INFO     | all payload control threads have been joined
[2025-10-12 18:49:35] 2025-10-12 22:49:05,034 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:05,035 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:05,035 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:05,106 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:05,151 | INFO     | [data] control thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:05,276 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:05,314 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:05,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:49:35] 2025-10-12 22:49:05,497 | INFO     | [payload] control thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:05,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:49:35] 2025-10-12 22:49:05,553 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:05,700 | INFO     | all job control threads have been joined
[2025-10-12 18:49:35] 2025-10-12 22:49:06,270 | INFO     | [job] validate thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:06,344 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:06,478 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:06,705 | INFO     | [job] control thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:07,473 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:09,548 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:14,532 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:49:35] 2025-10-12 22:49:15,537 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:49:35] 2025-10-12 22:49:29,735 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:49:35] 2025-10-12 22:49:30,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686478362432)>', '<ExcThread(monitor, started 139685212972800)>']
[2025-10-12 18:49:35] 2025-10-12 22:49:34,567 | INFO     | PID=387 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-12 18:49:35] 2025-10-12 22:49:34,567 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:49:35] 2025-10-12 22:49:34,567 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:49:35] 2025-10-12 22:49:34,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:49:35] 2025-10-12 22:49:34,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:49:35] 2025-10-12 22:49:34,568 | INFO     | [monitor] control thread has ended
[2025-10-12 18:49:35] 2025-10-12 22:49:35,497 | INFO     | all workflow threads have been joined
[2025-10-12 18:49:35] 2025-10-12 22:49:35,497 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:49:35] 2025-10-12 22:49:35,497 | INFO     | traces error code: 0
[2025-10-12 18:49:35] 2025-10-12 22:49:35,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:49:35] 2025-10-12 22:49:35,590 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:49:35] 2025-10-12 22:49:35,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:49:35] 2025-10-12 22:49:35,597 [wrapper] pilotpid: 387
[2025-10-12 18:49:35] 2025-10-12 22:49:35,601 [wrapper] Pilot exit status: 0
[2025-10-12 18:49:35] 2025-10-12 22:49:35,616 [wrapper] pandaids: 6840531124
[2025-10-12 18:49:35] 2025-10-12 22:49:35,659 [wrapper] cleanup supervisor_pilot 16967 388
[2025-10-12 18:49:35] 2025-10-12 22:49:35,663 [wrapper] Test setup, not cleaning
[2025-10-12 18:49:35] 2025-10-12 22:49:35,667 [wrapper] apfmon messages muted
[2025-10-12 18:49:35] 2025-10-12 22:49:35,670 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:49:35] 2025-10-12 22:49:35,674 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:49:35]  *** Error codes and diagnostics ***
[2025-10-12 18:49:35]     "exeErrorCode": 0,
[2025-10-12 18:49:35]     "exeErrorDiag": "",
[2025-10-12 18:49:35]     "pilotErrorCode": 0,
[2025-10-12 18:49:35]     "pilotErrorDiag": "",
[2025-10-12 18:49:35]  *** Listing of results directory ***
[2025-10-12 18:49:35] total 408568
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-12 18:49:35] -rwx------ 1 boincer umatlas     36292 Oct 12 14:01 runpilot2-wrapper.sh
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:01 queuedata.json
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas       100 Oct 12 17:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:49:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 17:37 run_atlas
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas       105 Oct 12 17:37 job.xml
[2025-10-12 18:49:35] -rw-r--r-- 2 boincer umatlas 220604287 Oct 12 17:37 EVNT.46676267._004382.pool.root.1
[2025-10-12 18:49:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:37 start_atlas.sh
[2025-10-12 18:49:35] drwxrwx--x 2 boincer umatlas      4096 Oct 12 17:37 shared
[2025-10-12 18:49:35] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 17:37 input.tar.gz
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas         0 Oct 12 17:37 boinc_lockfile
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 17:37 pandaJob.out
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas    975528 Oct 12 17:37 agis_schedconf.cvmfs.json
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas   1560580 Oct 12 17:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:49:35] drwx------ 5 boincer umatlas      4096 Oct 12 17:37 pilot3
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 18:37 init_data.xml
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas 191834389 Oct 12 18:48 HITS.46676269._085566.pool.root.1
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas      1049 Oct 12 18:48 memory_monitor_summary.json
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas       529 Oct 12 18:48 boinc_task_state.xml
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas    391779 Oct 12 18:48 log.46676269._085566.job.log.tgz.1
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas      7856 Oct 12 18:49 heartbeat.json
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:49 boinc_mmap_file
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas        27 Oct 12 18:49 wrapper_checkpoint.txt
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas        95 Oct 12 18:49 pilot_heartbeat.json
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas      4816 Oct 12 18:49 pilotlog.txt
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas    624846 Oct 12 18:49 log.46676269._085566.job.log.1
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas       357 Oct 12 18:49 output.list
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:49 runtime_log
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas   1034240 Oct 12 18:49 result.tar.gz
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 18:49 runtime_log.err
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas       658 Oct 12 18:49 3NONDmJZFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjcUMDm79UHem.diag
[2025-10-12 18:49:35] -rw-r--r-- 1 boincer umatlas     21948 Oct 12 18:49 stderr.txt
[2025-10-12 18:49:35] HITS file was successfully produced:
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas 191834389 Oct 12 18:48 shared/HITS.pool.root.1
[2025-10-12 18:49:35]  *** Contents of shared directory: ***
[2025-10-12 18:49:35] total 404368
[2025-10-12 18:49:35] -rw-r--r-- 2 boincer umatlas 220604287 Oct 12 17:37 ATLAS.root_0
[2025-10-12 18:49:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:37 start_atlas.sh
[2025-10-12 18:49:35] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 17:37 input.tar.gz
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas 191834389 Oct 12 18:48 HITS.pool.root.1
[2025-10-12 18:49:35] -rw------- 1 boincer umatlas   1034240 Oct 12 18:49 result.tar.gz
18:49:37 (28498): run_atlas exited; CPU time 46540.206246
18:49:37 (28498): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN