Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:25 (2633392): wrapper (7.7.26015): starting
00:04:25 (2633392): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:04:25] Arguments: --nthreads 9
[2025-10-13 00:04:25] Threads: 9
[2025-10-13 00:04:25] Checking for CVMFS
[2025-10-13 00:04:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:04:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:04:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:04:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:04:28] 2.13.2.0 128847 110089 436384 151647 2 79 22683755 39288832 12871 16776704 0 82430521 99.546 100011910 33433 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:04:28] CVMFS is ok
[2025-10-13 00:04:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:04:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:04:28] Further information can be found at the LHC@home message board.
[2025-10-13 00:04:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:04:28] Checking for apptainer binary...
[2025-10-13 00:04:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:04:28] Running /usr/bin/apptainer --version
[2025-10-13 00:04:28] apptainer version 1.4.3-1.el9
[2025-10-13 00:04:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:04:29] c-211-31.aglt2.org
[2025-10-13 00:04:29] apptainer works
[2025-10-13 00:04:29] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:04:29] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:04:29] Starting ATLAS job with PandaID=6839591512
[2025-10-13 00:04:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:48:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:48:59] 2025-10-14 00:48:18,326 | INFO     | current chi2=9.393352039690537 (change=30.34255308903862 %)
[2025-10-13 20:48:59] 2025-10-14 00:48:18,328 | INFO     | sum of square deviations: 546572555676.80743
[2025-10-13 20:48:59] 2025-10-14 00:48:18,411 | INFO     | sum of deviations: 2683774356369.289
[2025-10-13 20:48:59] 2025-10-14 00:48:18,411 | INFO     | mean x: 1760365983.1324503
[2025-10-13 20:48:59] 2025-10-14 00:48:18,411 | INFO     | mean y: 2499365.023178808
[2025-10-13 20:48:59] 2025-10-14 00:48:18,412 | INFO     | -- intersect: -8641229695.80671
[2025-10-13 20:48:59] 2025-10-14 00:48:18,412 | INFO     | intersect: -8641229695.80671
[2025-10-13 20:48:59] 2025-10-14 00:48:18,413 | INFO     | chi2: 6.555507406322225
[2025-10-13 20:48:59] 2025-10-14 00:48:18,414 | INFO     | current chi2=6.555507406322225 (change=30.211202788709752 %)
[2025-10-13 20:48:59] 2025-10-14 00:48:18,415 | INFO     | sum of square deviations: 539812608863.42786
[2025-10-13 20:48:59] 2025-10-14 00:48:18,507 | INFO     | sum of deviations: 2376533516119.0933
[2025-10-13 20:48:59] 2025-10-14 00:48:18,507 | INFO     | mean x: 1760366135.6392353
[2025-10-13 20:48:59] 2025-10-14 00:48:18,507 | INFO     | mean y: 2506296.103906899
[2025-10-13 20:48:59] 2025-10-14 00:48:18,508 | INFO     | -- intersect: -7747533353.388853
[2025-10-13 20:48:59] 2025-10-14 00:48:18,508 | INFO     | intersect: -7747533353.388853
[2025-10-13 20:48:59] 2025-10-14 00:48:18,509 | INFO     | chi2: 4.408507175876127
[2025-10-13 20:48:59] 2025-10-14 00:48:18,510 | INFO     | current chi2=4.408507175876127 (change=32.75109152306807 %)
[2025-10-13 20:48:59] 2025-10-14 00:48:18,511 | INFO     | sum of square deviations: 533108983143.8772
[2025-10-13 20:48:59] 2025-10-14 00:48:18,588 | INFO     | sum of deviations: 2102905676007.2605
[2025-10-13 20:48:59] 2025-10-14 00:48:18,588 | INFO     | mean x: 1760366288.1419032
[2025-10-13 20:48:59] 2025-10-14 00:48:18,588 | INFO     | mean y: 2512519.974958264
[2025-10-13 20:48:59] 2025-10-14 00:48:18,589 | INFO     | -- intersect: -6941441486.11682
[2025-10-13 20:48:59] 2025-10-14 00:48:18,589 | INFO     | intersect: -6941441486.11682
[2025-10-13 20:48:59] 2025-10-14 00:48:18,590 | INFO     | chi2: 2.7384430073168358
[2025-10-13 20:48:59] 2025-10-14 00:48:18,591 | INFO     | current chi2=2.7384430073168358 (change=37.88275944514915 %)
[2025-10-13 20:48:59] 2025-10-14 00:48:18,592 | INFO     | sum of square deviations: 526461079763.3077
[2025-10-13 20:48:59] 2025-10-14 00:48:18,677 | INFO     | sum of deviations: 1885739346948.1104
[2025-10-13 20:48:59] 2025-10-14 00:48:18,677 | INFO     | mean x: 1760366440.6445935
[2025-10-13 20:48:59] 2025-10-14 00:48:18,678 | INFO     | mean y: 2517500.8776194467
[2025-10-13 20:48:59] 2025-10-14 00:48:18,678 | INFO     | -- intersect: -6302967158.430842
[2025-10-13 20:48:59] 2025-10-14 00:48:18,678 | INFO     | intersect: -6302967158.430842
[2025-10-13 20:48:59] 2025-10-14 00:48:18,680 | INFO     | chi2: 1.7309321308871077
[2025-10-13 20:48:59] 2025-10-14 00:48:18,680 | INFO     | current chi2=1.7309321308871077 (change=36.79137647698943 %)
[2025-10-13 20:48:59] 2025-10-14 00:48:18,682 | INFO     | sum of square deviations: 519868811827.8065
[2025-10-13 20:48:59] 2025-10-14 00:48:18,745 | INFO     | sum of deviations: 1756935759945.8088
[2025-10-13 20:48:59] 2025-10-14 00:48:18,745 | INFO     | mean x: 1760366593.145623
[2025-10-13 20:48:59] 2025-10-14 00:48:18,746 | INFO     | mean y: 2520479.4057239057
[2025-10-13 20:48:59] 2025-10-14 00:48:18,746 | INFO     | -- intersect: -5946770856.686099
[2025-10-13 20:48:59] 2025-10-14 00:48:18,746 | INFO     | intersect: -5946770856.686099
[2025-10-13 20:48:59] 2025-10-14 00:48:18,748 | INFO     | chi2: 1.413511934484865
[2025-10-13 20:48:59] 2025-10-14 00:48:18,748 | INFO     | current chi2=1.413511934484865 (change=18.33810758597242 %)
[2025-10-13 20:48:59] 2025-10-14 00:48:18,748 | INFO     | left removable region: 60
[2025-10-13 20:48:59] 2025-10-14 00:48:18,750 | INFO     | sum of square deviations: 474022776160.49677
[2025-10-13 20:48:59] 2025-10-14 00:48:18,815 | INFO     | PID=2641407 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:48:59] 2025-10-14 00:48:18,835 | INFO     | .. there are 13 such processes running
[2025-10-13 20:48:59] 2025-10-14 00:48:18,835 | INFO     | sum of deviations: 1202309449744.235
[2025-10-13 20:48:59] 2025-10-14 00:48:18,836 | INFO     | mean x: 1760367325.1545138
[2025-10-13 20:48:59] 2025-10-14 00:48:18,836 | INFO     | mean y: 2533011.4930555555
[2025-10-13 20:48:59] 2025-10-14 00:48:18,836 | INFO     | -- intersect: -4462455542.849401
[2025-10-13 20:48:59] 2025-10-14 00:48:18,836 | INFO     | intersect: -4462455542.849401
[2025-10-13 20:48:59] 2025-10-14 00:48:18,838 | INFO     | chi2: 0.5436665653159456
[2025-10-13 20:48:59] 2025-10-14 00:48:18,838 | INFO     | -- intersect: -4462455542.849401
[2025-10-13 20:48:59] 2025-10-14 00:48:18,838 | INFO     | current memory leak: 2.54 B/s (using 1152 data points, chi2=0.54)
[2025-10-13 20:48:59] 2025-10-14 00:48:18,840 | INFO     | could have reported an average CPU frequency of 2899 MHz (44 samples)
[2025-10-13 20:48:59] 2025-10-14 00:48:18,840 | INFO     | ..............................
[2025-10-13 20:48:59] 2025-10-14 00:48:18,840 | INFO     | . Timing measurements:
[2025-10-13 20:48:59] 2025-10-14 00:48:18,840 | INFO     | . get job = 0 s
[2025-10-13 20:48:59] 2025-10-14 00:48:18,841 | INFO     | . initial setup = 8 s
[2025-10-13 20:48:59] 2025-10-14 00:48:18,841 | INFO     | . payload setup = 56 s
[2025-10-13 20:48:59] 2025-10-14 00:48:18,841 | INFO     | . stage-in = 0 s
[2025-10-13 20:48:59] 2025-10-14 00:48:18,841 | INFO     | . payload execution = 74321 s
[2025-10-13 20:48:59] 2025-10-14 00:48:18,841 | INFO     | . stage-out = 4 s
[2025-10-13 20:48:59] 2025-10-14 00:48:18,841 | INFO     | . log creation = 1 s
[2025-10-13 20:48:59] 2025-10-14 00:48:18,842 | INFO     | ..............................
[2025-10-13 20:48:59] 2025-10-14 00:48:19,099 | INFO     | 
[2025-10-13 20:48:59] 2025-10-14 00:48:19,099 | INFO     | job summary report
[2025-10-13 20:48:59] 2025-10-14 00:48:19,099 | INFO     | --------------------------------------------------
[2025-10-13 20:48:59] 2025-10-14 00:48:19,099 | INFO     | PanDA job id: 6839591512
[2025-10-13 20:48:59] 2025-10-14 00:48:19,099 | INFO     | task id: 46676269
[2025-10-13 20:48:59] 2025-10-14 00:48:19,100 | INFO     | errors: (none)
[2025-10-13 20:48:59] 2025-10-14 00:48:19,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 20:48:59] 2025-10-14 00:48:19,100 | INFO     | pilot state: finished 
[2025-10-13 20:48:59] 2025-10-14 00:48:19,100 | INFO     | transexitcode: 0
[2025-10-13 20:48:59] 2025-10-14 00:48:19,100 | INFO     | exeerrorcode: 0
[2025-10-13 20:48:59] 2025-10-14 00:48:19,100 | INFO     | exeerrordiag: 
[2025-10-13 20:48:59] 2025-10-14 00:48:19,101 | INFO     | exitcode: 0
[2025-10-13 20:48:59] 2025-10-14 00:48:19,101 | INFO     | exitmsg: OK
[2025-10-13 20:48:59] 2025-10-14 00:48:19,101 | INFO     | cpuconsumptiontime: 79921 s
[2025-10-13 20:48:59] 2025-10-14 00:48:19,101 | INFO     | nevents: 400
[2025-10-13 20:48:59] 2025-10-14 00:48:19,101 | INFO     | neventsw: 0
[2025-10-13 20:48:59] 2025-10-14 00:48:19,101 | INFO     | pid: 2657258
[2025-10-13 20:48:59] 2025-10-14 00:48:19,102 | INFO     | pgrp: 2657258
[2025-10-13 20:48:59] 2025-10-14 00:48:19,102 | INFO     | corecount: 9
[2025-10-13 20:48:59] 2025-10-14 00:48:19,102 | INFO     | event service: False
[2025-10-13 20:48:59] 2025-10-14 00:48:19,102 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348742, 3: 2348913, 4: 2348941, 16: 2348969, 27: 2349125, 39: 2349153, 45: 2349443, 51: 2349471, 74382: 2407515, 74388: 2416513
[2025-10-13 20:48:59] 2025-10-14 00:48:19,102 | INFO     | --------------------------------------------------
[2025-10-13 20:48:59] 2025-10-14 00:48:19,102 | INFO     | 
[2025-10-13 20:48:59] 2025-10-14 00:48:19,107 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 20:48:59] 2025-10-14 00:48:19,210 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,211 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,211 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,211 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,211 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,211 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 20:48:59] 2025-10-14 00:48:19,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,214 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 20:48:59] 2025-10-14 00:48:19,214 | INFO     | job 6839591512 has completed (purged errors)
[2025-10-13 20:48:59] 2025-10-14 00:48:19,214 | INFO     | overall cleanup function is called
[2025-10-13 20:48:59] 2025-10-14 00:48:20,225 | INFO     | --- collectZombieJob: --- 10, [2657258]
[2025-10-13 20:48:59] 2025-10-14 00:48:20,225 | INFO     | zombie collector waiting for pid 2657258
[2025-10-13 20:48:59] 2025-10-14 00:48:20,225 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 20:48:59] 2025-10-14 00:48:20,225 | INFO     | collected zombie processes
[2025-10-13 20:48:59] 2025-10-14 00:48:20,225 | INFO     | will attempt to kill all subprocesses of pid=2657258
[2025-10-13 20:48:59] 2025-10-14 00:48:21,002 | INFO     | process IDs to be killed: [2657258] (in reverse order)
[2025-10-13 20:48:59] 2025-10-14 00:48:21,657 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 20:48:59] 2025-10-14 00:48:21,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 20:48:59] 2025-10-14 00:48:21,736 | INFO     | did not find any defunct processes belonging to 2657258
[2025-10-13 20:48:59] 2025-10-14 00:48:21,767 | INFO     | did not find any defunct processes belonging to 2657258
[2025-10-13 20:48:59] 2025-10-14 00:48:21,767 | INFO     | ready for new job
[2025-10-13 20:48:59] 2025-10-14 00:48:21,767 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 20:48:59] 2025-10-14 00:48:21,777 | INFO     | ***************************************
[2025-10-13 20:48:59] 2025-10-14 00:48:21,777 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 20:48:59] 2025-10-14 00:48:21,777 | INFO     | ***************************************
[2025-10-13 20:48:59] 2025-10-14 00:48:21,777 | INFO     | 
[2025-10-13 20:48:59] 2025-10-14 00:48:21,783 | INFO     | architecture information:
[2025-10-13 20:48:59] 2025-10-14 00:48:21,792 | INFO     | executing command: cat /etc/os-release
[2025-10-13 20:48:59] 2025-10-14 00:48:21,826 | INFO     | cat /etc/os-release:
[2025-10-13 20:48:59] NAME="CentOS Linux"
[2025-10-13 20:48:59] VERSION="7 (Core)"
[2025-10-13 20:48:59] ID="centos"
[2025-10-13 20:48:59] ID_LIKE="rhel fedora"
[2025-10-13 20:48:59] VERSION_ID="7"
[2025-10-13 20:48:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:48:59] ANSI_COLOR="0;31"
[2025-10-13 20:48:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:48:59] HOME_URL="https://www.centos.org/"
[2025-10-13 20:48:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:48:59] 
[2025-10-13 20:48:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:48:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:48:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:48:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:48:59] 
[2025-10-13 20:48:59] 2025-10-14 00:48:21,826 | INFO     | ***************************************
[2025-10-13 20:48:59] 2025-10-14 00:48:22,330 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 20:48:59] 2025-10-14 00:48:22,353 | INFO     | sufficient remaining disk space (53121908736 B)
[2025-10-13 20:48:59] 2025-10-14 00:48:22,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:48:59] 2025-10-14 00:48:22,354 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:48:59] 2025-10-14 00:48:22,354 | INFO     | update_server=False
[2025-10-13 20:48:59] 2025-10-14 00:48:22,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:48:59] 2025-10-14 00:48:22,521 | INFO     | all data control threads have been joined
[2025-10-13 20:48:59] 2025-10-14 00:48:22,569 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:48:59] 2025-10-14 00:48:22,569 | INFO     | aborting loop
[2025-10-13 20:48:59] 2025-10-14 00:48:22,743 | INFO     | all payload control threads have been joined
[2025-10-13 20:48:59] 2025-10-14 00:48:23,302 | INFO     | all job control threads have been joined
[2025-10-13 20:48:59] 2025-10-14 00:48:23,360 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:23,386 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:23,527 | INFO     | [data] control thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:23,575 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:23,643 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:23,649 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:23,749 | INFO     | [payload] control thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:23,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:48:59] 2025-10-14 00:48:23,937 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:24,100 | INFO     | [job] validate thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:24,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:48:59] 2025-10-14 00:48:24,308 | INFO     | [job] control thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:24,505 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:24,688 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:25,125 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:25,427 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:48:59] 2025-10-14 00:48:25,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:48:59] 2025-10-14 00:48:25,862 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:29,548 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:33,338 | INFO     | job.realtimelogging is not enabled
[2025-10-13 20:48:59] 2025-10-14 00:48:34,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:48:59] 2025-10-14 00:48:35,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081696003904)>', '<ExcThread(monitor, started 140080828118784)>']
[2025-10-13 20:48:59] 2025-10-14 00:48:40,839 | INFO     | all workflow threads have been joined
[2025-10-13 20:48:59] 2025-10-14 00:48:40,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:48:59] 2025-10-14 00:48:40,839 | INFO     | traces error code: 0
[2025-10-13 20:48:59] 2025-10-14 00:48:40,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:48:59] 2025-10-14 00:48:56,890 | INFO     | PID=2641407 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:48:59] 2025-10-14 00:48:56,892 | INFO     | .. there are 13 such processes running
[2025-10-13 20:48:59] 2025-10-14 00:48:56,942 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:48:59] 2025-10-14 00:48:56,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:48:59] 2025-10-14 00:48:56,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:48:59] 2025-10-14 00:48:56,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:48:59] 2025-10-14 00:48:56,943 | INFO     | [monitor] control thread has ended
[2025-10-13 20:48:59] 2025-10-14 00:48:58,208 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:48:59] 2025-10-14 00:48:58,233 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:48:59] 2025-10-14 00:48:58,270 [wrapper] pilotpid: 2641407
[2025-10-13 20:48:59] 2025-10-14 00:48:58,294 [wrapper] Pilot exit status: 0
[2025-10-13 20:48:59] 2025-10-14 00:48:58,439 [wrapper] pandaids: 6839591512
[2025-10-13 20:48:59] 2025-10-14 00:48:58,988 [wrapper] cleanup supervisor_pilot  551144 2641408
[2025-10-13 20:48:59] 2025-10-14 00:48:58,991 [wrapper] Test setup, not cleaning
[2025-10-13 20:48:59] 2025-10-14 00:48:58,995 [wrapper] apfmon messages muted
[2025-10-13 20:48:59] 2025-10-14 00:48:58,999 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:48:59] 2025-10-14 00:48:59,004 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:48:59]  *** Error codes and diagnostics ***
[2025-10-13 20:48:59]     "exeErrorCode": 0,
[2025-10-13 20:48:59]     "exeErrorDiag": "",
[2025-10-13 20:48:59]     "pilotErrorCode": 0,
[2025-10-13 20:48:59]     "pilotErrorDiag": "",
[2025-10-13 20:48:59]  *** Listing of results directory ***
[2025-10-13 20:48:59] total 424488
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:14 pilot3.tar.gz
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 02:32 queuedata.json
[2025-10-13 20:48:59] -rwx------. 1 boincer umatlas     36292 Oct 12 02:32 runpilot2-wrapper.sh
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:48:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:04 run_atlas
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:04 job.xml
[2025-10-13 20:48:59] -rw-r--r--. 2 boincer umatlas 221187028 Oct 13 00:04 EVNT.46676267._004514.pool.root.1
[2025-10-13 20:48:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 20:48:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:04 shared
[2025-10-13 20:48:59] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:04 input.tar.gz
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:04 boinc_lockfile
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:04 pandaJob.out
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas    974373 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 20:48:59] drwx------. 5 boincer umatlas      4096 Oct 13 00:06 pilot3
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas      6524 Oct 13 20:36 init_data.xml
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas 189619869 Oct 13 20:46 HITS.46676269._072776.pool.root.1
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas       531 Oct 13 20:46 boinc_task_state.xml
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas      1040 Oct 13 20:47 memory_monitor_summary.json
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas   1560580 Oct 13 20:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas   1205406 Oct 13 20:47 log.46676269._072776.job.log.tgz.1
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas      7822 Oct 13 20:48 heartbeat.json
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 20:48 boinc_mmap_file
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas        28 Oct 13 20:48 wrapper_checkpoint.txt
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas        95 Oct 13 20:48 pilot_heartbeat.json
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas       823 Oct 13 20:48 pilotlog.txt
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas   8782622 Oct 13 20:48 log.46676269._072776.job.log.1
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas       357 Oct 13 20:48 output.list
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas       620 Oct 13 20:48 runtime_log
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas  10004480 Oct 13 20:48 result.tar.gz
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 20:48 runtime_log.err
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas       659 Oct 13 20:48 QAFODmEo4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYsiNDmIwKZDo.diag
[2025-10-13 20:48:59] -rw-r--r--. 1 boincer umatlas     21203 Oct 13 20:48 stderr.txt
[2025-10-13 20:48:59] HITS file was successfully produced:
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas 189619869 Oct 13 20:46 shared/HITS.pool.root.1
[2025-10-13 20:48:59]  *** Contents of shared directory: ***
[2025-10-13 20:48:59] total 411532
[2025-10-13 20:48:59] -rw-r--r--. 2 boincer umatlas 221187028 Oct 13 00:04 ATLAS.root_0
[2025-10-13 20:48:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 20:48:59] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:04 input.tar.gz
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas 189619869 Oct 13 20:46 HITS.pool.root.1
[2025-10-13 20:48:59] -rw-------. 1 boincer umatlas  10004480 Oct 13 20:48 result.tar.gz
20:49:01 (2633392): run_atlas exited; CPU time 82816.183223
20:49:01 (2633392): called boinc_finish(0)

</stderr_txt>
]]>

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