Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:33:28 (2546263): wrapper (7.7.26015): starting
19:33:28 (2546263): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:33:28] Arguments: --nthreads 8
[2025-10-12 19:33:28] Threads: 8
[2025-10-12 19:33:28] Checking for CVMFS
[2025-10-12 19:33:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:33:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:33:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:33:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:33:29] 2.13.2.0 5096 6345 90120 151641 2 361 37986441 40960001 21791 16776704 0 17590060 99.873 4188053 33420 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:33:29] CVMFS is ok
[2025-10-12 19:33:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:33:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:33:29] Further information can be found at the LHC@home message board.
[2025-10-12 19:33:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:33:29] Checking for apptainer binary...
[2025-10-12 19:33:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:33:29] Running /usr/bin/apptainer --version
[2025-10-12 19:33:29] apptainer version 1.4.3-1.el9
[2025-10-12 19:33:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:33:29] c-212-5.aglt2.org
[2025-10-12 19:33:29] apptainer works
[2025-10-12 19:33:29] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:33:29] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:33:29] Starting ATLAS job with PandaID=6840715219
[2025-10-12 19:33:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:25:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:25:05] 2025-10-13 02:24:16,898 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:25:05] 2025-10-13 02:24:16,898 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:25:05] 2025-10-13 02:24:16,901 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:25:05] 2025-10-13 02:24:16,924 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 22:25:05] 2025-10-13 02:24:16,925 | INFO     | sum of deviations: 33735800814.999992
[2025-10-12 22:25:05] 2025-10-13 02:24:16,926 | INFO     | mean x: 1760317119.0
[2025-10-12 22:25:05] 2025-10-13 02:24:16,926 | INFO     | mean y: 2491987.4670658684
[2025-10-12 22:25:05] 2025-10-13 02:24:16,926 | INFO     | -- intersect: -41119076496.32317
[2025-10-12 22:25:05] 2025-10-13 02:24:16,926 | INFO     | intersect: -41119076496.32317
[2025-10-12 22:25:05] 2025-10-13 02:24:16,926 | INFO     | chi2: 3.3929849450132687
[2025-10-12 22:25:05] 2025-10-13 02:24:16,926 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 22:25:05] 2025-10-13 02:24:16,927 | INFO     | sum of deviations: 33201619423.000004
[2025-10-12 22:25:05] 2025-10-13 02:24:16,928 | INFO     | mean x: 1760316966.5
[2025-10-12 22:25:05] 2025-10-13 02:24:16,950 | INFO     | mean y: 2491339.864197531
[2025-10-12 22:25:05] 2025-10-13 02:24:16,950 | INFO     | -- intersect: -44332152407.83007
[2025-10-12 22:25:05] 2025-10-13 02:24:16,950 | INFO     | intersect: -44332152407.83007
[2025-10-12 22:25:05] 2025-10-13 02:24:16,951 | INFO     | chi2: 3.3979750707778194
[2025-10-12 22:25:05] 2025-10-13 02:24:16,951 | INFO     | current chi2=3.3979750707778194 (change=-0.14707185105211504 %)
[2025-10-12 22:25:05] 2025-10-13 02:24:16,951 | INFO     | right removable region: 161
[2025-10-12 22:25:05] 2025-10-13 02:24:16,951 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 22:25:05] 2025-10-13 02:24:16,952 | INFO     | sum of deviations: -10494499017.500002
[2025-10-12 22:25:05] 2025-10-13 02:24:16,952 | INFO     | mean x: 1760317271.5
[2025-10-12 22:25:05] 2025-10-13 02:24:16,952 | INFO     | mean y: 2545378.154320988
[2025-10-12 22:25:05] 2025-10-13 02:24:16,952 | INFO     | -- intersect: 14016017128.984537
[2025-10-12 22:25:05] 2025-10-13 02:24:16,952 | INFO     | intersect: 14016017128.984537
[2025-10-12 22:25:05] 2025-10-13 02:24:16,953 | INFO     | chi2: 0.560458395924737
[2025-10-12 22:25:05] 2025-10-13 02:24:16,953 | INFO     | current chi2=0.560458395924737 (change=83.48184843117407 %)
[2025-10-12 22:25:05] 2025-10-13 02:24:16,953 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 22:25:05] 2025-10-13 02:24:16,984 | INFO     | sum of deviations: -22148951282.00003
[2025-10-12 22:25:05] 2025-10-13 02:24:16,985 | INFO     | mean x: 1760317424.0
[2025-10-12 22:25:05] 2025-10-13 02:24:16,985 | INFO     | mean y: 2560339.6751592355
[2025-10-12 22:25:05] 2025-10-13 02:24:16,985 | INFO     | -- intersect: 32495155081.709217
[2025-10-12 22:25:05] 2025-10-13 02:24:16,985 | INFO     | intersect: 32495155081.709217
[2025-10-12 22:25:05] 2025-10-13 02:24:16,995 | INFO     | chi2: 0.31697906538998455
[2025-10-12 22:25:05] 2025-10-13 02:24:16,996 | INFO     | current chi2=0.31697906538998455 (change=43.442891087931685 %)
[2025-10-12 22:25:05] 2025-10-13 02:24:16,996 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 22:25:05] 2025-10-13 02:24:16,997 | INFO     | sum of deviations: -25172142880.0
[2025-10-12 22:25:05] 2025-10-13 02:24:16,997 | INFO     | mean x: 1760317576.5
[2025-10-12 22:25:05] 2025-10-13 02:24:16,997 | INFO     | mean y: 2564439.6842105263
[2025-10-12 22:25:05] 2025-10-13 02:24:16,997 | INFO     | -- intersect: 40695668923.65211
[2025-10-12 22:25:05] 2025-10-13 02:24:16,997 | INFO     | intersect: 40695668923.65211
[2025-10-12 22:25:05] 2025-10-13 02:24:16,998 | INFO     | chi2: 0.2716884340926405
[2025-10-12 22:25:05] 2025-10-13 02:24:16,998 | INFO     | current chi2=0.2716884340926405 (change=14.288208983650783 %)
[2025-10-12 22:25:05] 2025-10-13 02:24:16,998 | INFO     | left removable region: 30
[2025-10-12 22:25:05] 2025-10-13 02:24:16,998 | INFO     | sum of square deviations: 697054930.0
[2025-10-12 22:25:05] 2025-10-13 02:24:17,002 | INFO     | sum of deviations: -14570203800.0
[2025-10-12 22:25:05] 2025-10-13 02:24:17,002 | INFO     | mean x: 1760317851.0
[2025-10-12 22:25:05] 2025-10-13 02:24:17,002 | INFO     | mean y: 2549756.7251908397
[2025-10-12 22:25:05] 2025-10-13 02:24:17,002 | INFO     | -- intersect: 36797626784.367805
[2025-10-12 22:25:05] 2025-10-13 02:24:17,003 | INFO     | intersect: 36797626784.367805
[2025-10-12 22:25:05] 2025-10-13 02:24:17,003 | INFO     | chi2: 0.21928028117154172
[2025-10-12 22:25:05] 2025-10-13 02:24:17,003 | INFO     | -- intersect: 36797626784.367805
[2025-10-12 22:25:05] 2025-10-13 02:24:17,003 | INFO     | current memory leak: -20.90 B/s (using 131 data points, chi2=0.22)
[2025-10-12 22:25:05] 2025-10-13 02:24:17,003 | INFO     | could have reported an average CPU frequency of 2950 MHz (9 samples)
[2025-10-12 22:25:05] 2025-10-13 02:24:17,004 | INFO     | ..............................
[2025-10-12 22:25:05] 2025-10-13 02:24:17,004 | INFO     | . Timing measurements:
[2025-10-12 22:25:05] 2025-10-13 02:24:17,004 | INFO     | . get job = 0 s
[2025-10-12 22:25:05] 2025-10-13 02:24:17,004 | INFO     | . initial setup = 2 s
[2025-10-12 22:25:05] 2025-10-13 02:24:17,004 | INFO     | . payload setup = 9 s
[2025-10-12 22:25:05] 2025-10-13 02:24:17,004 | INFO     | . stage-in = 0 s
[2025-10-12 22:25:05] 2025-10-13 02:24:17,004 | INFO     | . payload execution = 10193 s
[2025-10-12 22:25:05] 2025-10-13 02:24:17,004 | INFO     | . stage-out = 1 s
[2025-10-12 22:25:05] 2025-10-13 02:24:17,004 | INFO     | . log creation = 0 s
[2025-10-12 22:25:05] 2025-10-13 02:24:17,004 | INFO     | ..............................
[2025-10-12 22:25:05] 2025-10-13 02:24:17,110 | INFO     | 
[2025-10-12 22:25:05] 2025-10-13 02:24:17,110 | INFO     | job summary report
[2025-10-12 22:25:05] 2025-10-13 02:24:17,111 | INFO     | --------------------------------------------------
[2025-10-12 22:25:05] 2025-10-13 02:24:17,111 | INFO     | PanDA job id: 6840715219
[2025-10-12 22:25:05] 2025-10-13 02:24:17,111 | INFO     | task id: 46676269
[2025-10-12 22:25:05] 2025-10-13 02:24:17,111 | INFO     | errors: (none)
[2025-10-12 22:25:05] 2025-10-13 02:24:17,111 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:25:05] 2025-10-13 02:24:17,111 | INFO     | pilot state: finished 
[2025-10-12 22:25:05] 2025-10-13 02:24:17,111 | INFO     | transexitcode: 0
[2025-10-12 22:25:05] 2025-10-13 02:24:17,111 | INFO     | exeerrorcode: 0
[2025-10-12 22:25:05] 2025-10-13 02:24:17,111 | INFO     | exeerrordiag: 
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | exitcode: 0
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | exitmsg: OK
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | cpuconsumptiontime: 34381 s
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | nevents: 400
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | neventsw: 0
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | pid: 2557147
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | pgrp: 2557147
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | corecount: 8
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | event service: False
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 10207: 2377803, 10208: 2377802, 10210: 2387040, 10221: 2387242}
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | --------------------------------------------------
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | 
[2025-10-12 22:25:05] 2025-10-13 02:24:17,112 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 22:25:05] 2025-10-13 02:24:17,144 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,145 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,145 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,145 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | job 6840715219 has completed (purged errors)
[2025-10-12 22:25:05] 2025-10-13 02:24:17,146 | INFO     | overall cleanup function is called
[2025-10-12 22:25:05] 2025-10-13 02:24:18,156 | INFO     | --- collectZombieJob: --- 10, [2557147]
[2025-10-12 22:25:05] 2025-10-13 02:24:18,156 | INFO     | zombie collector waiting for pid 2557147
[2025-10-12 22:25:05] 2025-10-13 02:24:18,156 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:25:05] 2025-10-13 02:24:18,156 | INFO     | collected zombie processes
[2025-10-12 22:25:05] 2025-10-13 02:24:18,157 | INFO     | will attempt to kill all subprocesses of pid=2557147
[2025-10-12 22:25:05] 2025-10-13 02:24:18,501 | INFO     | process IDs to be killed: [2557147] (in reverse order)
[2025-10-12 22:25:05] 2025-10-13 02:24:18,631 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:25:05] 2025-10-13 02:24:18,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:25:05] 2025-10-13 02:24:18,645 | INFO     | did not find any defunct processes belonging to 2557147
[2025-10-12 22:25:05] 2025-10-13 02:24:18,661 | INFO     | did not find any defunct processes belonging to 2557147
[2025-10-12 22:25:05] 2025-10-13 02:24:18,661 | INFO     | ready for new job
[2025-10-12 22:25:05] 2025-10-13 02:24:18,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:25:05] 2025-10-13 02:24:18,664 | INFO     | ***************************************
[2025-10-12 22:25:05] 2025-10-13 02:24:18,664 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:25:05] 2025-10-13 02:24:18,664 | INFO     | ***************************************
[2025-10-12 22:25:05] 2025-10-13 02:24:18,664 | INFO     | 
[2025-10-12 22:25:05] 2025-10-13 02:24:18,670 | INFO     | architecture information:
[2025-10-12 22:25:05] 2025-10-13 02:24:18,671 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:25:05] 2025-10-13 02:24:18,730 | INFO     | cat /etc/os-release:
[2025-10-12 22:25:05] NAME="CentOS Linux"
[2025-10-12 22:25:05] VERSION="7 (Core)"
[2025-10-12 22:25:05] ID="centos"
[2025-10-12 22:25:05] ID_LIKE="rhel fedora"
[2025-10-12 22:25:05] VERSION_ID="7"
[2025-10-12 22:25:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:25:05] ANSI_COLOR="0;31"
[2025-10-12 22:25:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:25:05] HOME_URL="https://www.centos.org/"
[2025-10-12 22:25:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:25:05] 
[2025-10-12 22:25:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:25:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:25:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:25:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:25:05] 
[2025-10-12 22:25:05] 2025-10-13 02:24:18,730 | INFO     | ***************************************
[2025-10-12 22:25:05] 2025-10-13 02:24:19,234 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 22:25:05] 2025-10-13 02:24:19,268 | INFO     | sufficient remaining disk space (127582339072 B)
[2025-10-12 22:25:05] 2025-10-13 02:24:19,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:25:05] 2025-10-13 02:24:19,269 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:25:05] 2025-10-13 02:24:19,269 | INFO     | update_server=False
[2025-10-12 22:25:05] 2025-10-13 02:24:19,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:25:05] 2025-10-13 02:24:19,269 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:25:05] 2025-10-13 02:24:19,269 | INFO     | aborting loop
[2025-10-12 22:25:05] 2025-10-13 02:24:19,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:25:05] 2025-10-13 02:24:19,349 | INFO     | all job control threads have been joined
[2025-10-12 22:25:05] 2025-10-13 02:24:20,050 | INFO     | all payload control threads have been joined
[2025-10-12 22:25:05] 2025-10-13 02:24:20,220 | INFO     | all data control threads have been joined
[2025-10-12 22:25:05] 2025-10-13 02:24:20,274 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:20,275 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:20,354 | INFO     | [job] control thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:20,686 | INFO     | [job] validate thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:21,007 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:21,037 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:21,058 | INFO     | [payload] control thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:21,181 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:21,204 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:21,229 | INFO     | [data] control thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:21,275 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:21,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:25:05] 2025-10-13 02:24:21,631 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:21,771 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:22,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:25:05] 2025-10-13 02:24:23,135 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:25,601 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:30,093 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:25:05] 2025-10-13 02:24:31,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:25:05] 2025-10-13 02:24:49,715 | INFO     | PID=2549924 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:25:05] 2025-10-13 02:24:49,715 | INFO     | .. there are 16 such processes running
[2025-10-12 22:25:05] 2025-10-13 02:24:49,715 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:25:05] 2025-10-13 02:24:49,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:25:05] 2025-10-13 02:24:49,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:25:05] 2025-10-13 02:24:57,675 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:25:05] 2025-10-13 02:24:59,607 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503533897536)>', '<ExcThread(monitor, started 140503026734848)>']
[2025-10-12 22:25:05] 2025-10-13 02:24:59,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:25:05] 2025-10-13 02:24:59,783 | INFO     | [monitor] control thread has ended
[2025-10-12 22:25:05] 2025-10-13 02:25:04,633 | INFO     | all workflow threads have been joined
[2025-10-12 22:25:05] 2025-10-13 02:25:04,635 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:25:05] 2025-10-13 02:25:04,635 | INFO     | traces error code: 0
[2025-10-12 22:25:05] 2025-10-13 02:25:04,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:25:05] 2025-10-13 02:25:04,840 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:25:05] 2025-10-13 02:25:04,846 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:25:05] 2025-10-13 02:25:04,848 [wrapper] pilotpid: 2549924
[2025-10-12 22:25:05] 2025-10-13 02:25:04,851 [wrapper] Pilot exit status: 0
[2025-10-12 22:25:05] 2025-10-13 02:25:04,971 [wrapper] pandaids: 6840715219
[2025-10-12 22:25:05] 2025-10-13 02:25:05,116 [wrapper] cleanup supervisor_pilot 2818814 2549925
[2025-10-12 22:25:05] 2025-10-13 02:25:05,139 [wrapper] Test setup, not cleaning
[2025-10-12 22:25:05] 2025-10-13 02:25:05,143 [wrapper] apfmon messages muted
[2025-10-12 22:25:05] 2025-10-13 02:25:05,146 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:25:05] 2025-10-13 02:25:05,148 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:25:05]  *** Error codes and diagnostics ***
[2025-10-12 22:25:05]     "exeErrorCode": 0,
[2025-10-12 22:25:05]     "exeErrorDiag": "",
[2025-10-12 22:25:05]     "pilotErrorCode": 0,
[2025-10-12 22:25:05]     "pilotErrorDiag": "",
[2025-10-12 22:25:05]  *** Listing of results directory ***
[2025-10-12 22:25:05] total 408496
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:01 queuedata.json
[2025-10-12 22:25:05] -rwx------. 1 boincer umatlas     36292 Oct 12 16:02 runpilot2-wrapper.sh
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:25:05] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:33 run_atlas
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:33 job.xml
[2025-10-12 22:25:05] -rw-r--r--. 2 boincer umatlas 220477771 Oct 12 19:33 EVNT.46676267._004481.pool.root.1
[2025-10-12 22:25:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:33 start_atlas.sh
[2025-10-12 22:25:05] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:33 shared
[2025-10-12 22:25:05] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 19:33 input.tar.gz
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:33 boinc_lockfile
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 19:33 pandaJob.out
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas    975603 Oct 12 19:33 agis_schedconf.cvmfs.json
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:25:05] drwx------. 5 boincer umatlas      4096 Oct 12 19:33 pilot3
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas      6945 Oct 12 22:18 init_data.xml
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas 190276360 Oct 12 22:23 HITS.46676269._088171.pool.root.1
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas       530 Oct 12 22:23 boinc_task_state.xml
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas        95 Oct 12 22:23 pilot_heartbeat.json
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas      1044 Oct 12 22:24 memory_monitor_summary.json
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas    409231 Oct 12 22:24 log.46676269._088171.job.log.tgz.1
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas      7799 Oct 12 22:24 heartbeat.json
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas        27 Oct 12 22:25 wrapper_checkpoint.txt
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:25 boinc_mmap_file
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas      4897 Oct 12 22:25 pilotlog.txt
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas   1410648 Oct 12 22:25 log.46676269._088171.job.log.1
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas       357 Oct 12 22:25 output.list
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:25 runtime_log
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas   1843200 Oct 12 22:25 result.tar.gz
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas       658 Oct 12 22:25 ZAgKDm0RHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKNlNDmmoC2Mo.diag
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 22:25 runtime_log.err
[2025-10-12 22:25:05] -rw-r--r--. 1 boincer umatlas     20894 Oct 12 22:25 stderr.txt
[2025-10-12 22:25:05] HITS file was successfully produced:
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas 190276360 Oct 12 22:23 shared/HITS.pool.root.1
[2025-10-12 22:25:05]  *** Contents of shared directory: ***
[2025-10-12 22:25:05] total 403512
[2025-10-12 22:25:05] -rw-r--r--. 2 boincer umatlas 220477771 Oct 12 19:33 ATLAS.root_0
[2025-10-12 22:25:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:33 start_atlas.sh
[2025-10-12 22:25:05] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 19:33 input.tar.gz
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas 190276360 Oct 12 22:23 HITS.pool.root.1
[2025-10-12 22:25:05] -rw-------. 1 boincer umatlas   1843200 Oct 12 22:25 result.tar.gz
22:25:06 (2546263): run_atlas exited; CPU time 34609.918371
22:25:06 (2546263): called boinc_finish(0)

</stderr_txt>
]]>

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