Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:30:58 (2956324): wrapper (7.7.26015): starting
13:30:58 (2956324): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 13:30:58] Arguments: --nthreads 3
[2025-10-13 13:30:58] Threads: 3
[2025-10-13 13:30:58] Checking for CVMFS
[2025-10-13 13:30:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:30:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:30:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:30:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:30:58] 2.9.2.0 1212649 5794 84304 151660 1 57 3918881 36864001 0 130560 0 4601117 99.991 198810 849 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 13:30:58] CVMFS is ok
[2025-10-13 13:30:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:30:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:30:58] Further information can be found at the LHC@home message board.
[2025-10-13 13:30:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:30:58] Checking for apptainer binary...
[2025-10-13 13:30:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:30:58] Running /usr/bin/apptainer --version
[2025-10-13 13:30:58] apptainer version 1.4.1-1.1
[2025-10-13 13:30:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:30:58] thA325a
[2025-10-13 13:30:58] apptainer works
[2025-10-13 13:30:58] Set ATHENA_PROC_NUMBER=3
[2025-10-13 13:30:58] Set ATHENA_CORE_NUMBER=3
[2025-10-13 13:30:58] Starting ATLAS job with PandaID=6840429325
[2025-10-13 13:30:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:54:30]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:54:30] VERSION="7 (Core)"
[2025-10-13 14:54:30] ID="centos"
[2025-10-13 14:54:30] ID_LIKE="rhel fedora"
[2025-10-13 14:54:30] VERSION_ID="7"
[2025-10-13 14:54:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:54:30] ANSI_COLOR="0;31"
[2025-10-13 14:54:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:54:30] HOME_URL="https://www.centos.org/"
[2025-10-13 14:54:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:54:30] 
[2025-10-13 14:54:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:54:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:54:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:54:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:54:30] 
[2025-10-13 14:54:30] 2025-10-13 12:53:58,960 | INFO     | ***************************************
[2025-10-13 14:54:30] 2025-10-13 12:53:59,463 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 14:54:30] 2025-10-13 12:53:59,475 | INFO     | sufficient remaining disk space (256017170432 B)
[2025-10-13 14:54:30] 2025-10-13 12:53:59,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:54:30] 2025-10-13 12:53:59,476 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:54:30] 2025-10-13 12:53:59,476 | INFO     | update_server=False
[2025-10-13 14:54:30] 2025-10-13 12:53:59,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:54:30] 2025-10-13 12:53:59,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:54:30] 2025-10-13 12:53:59,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:54:30] 2025-10-13 12:53:59,476 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:54:30] 2025-10-13 12:53:59,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:54:30] 2025-10-13 12:53:59,476 | INFO     | aborting loop
[2025-10-13 14:54:30] 2025-10-13 12:53:59,970 | INFO     | all payload control threads have been joined
[2025-10-13 14:54:30] 2025-10-13 12:54:00,133 | INFO     | all data control threads have been joined
[2025-10-13 14:54:30] 2025-10-13 12:54:00,481 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:00,482 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:00,482 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:00,728 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:00,779 | INFO     | all job control threads have been joined
[2025-10-13 14:54:30] 2025-10-13 12:54:00,976 | INFO     | [payload] control thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:01,139 | INFO     | [data] control thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:01,256 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:01,373 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:01,482 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:01,644 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:01,785 | INFO     | [job] control thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:01,887 | INFO     | [job] validate thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:01,937 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:01,947 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:03,483 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:09,184 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:54:30] 2025-10-13 12:54:10,242 | INFO     | job.realtimelogging is not enabled
[2025-10-13 14:54:30] 2025-10-13 12:54:11,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:54:30] 2025-10-13 12:54:11,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140401762600768)>', '<ExcThread(monitor, started 140401105155840)>']
[2025-10-13 14:54:30] 2025-10-13 12:54:16,542 | INFO     | all workflow threads have been joined
[2025-10-13 14:54:30] 2025-10-13 12:54:16,543 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:54:30] 2025-10-13 12:54:16,543 | INFO     | traces error code: 0
[2025-10-13 14:54:30] 2025-10-13 12:54:16,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:54:30] 2025-10-13 12:54:30,325 | INFO     | PID=2960041 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:54:30] 2025-10-13 12:54:30,325 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:54:30] 2025-10-13 12:54:30,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:54:30] 2025-10-13 12:54:30,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:54:30] 2025-10-13 12:54:30,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:54:30] 2025-10-13 12:54:30,325 | INFO     | [monitor] control thread has ended
[2025-10-13 14:54:30] 2025-10-13 12:54:30,375 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:54:30] 2025-10-13 12:54:30,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:54:30] 2025-10-13 12:54:30,380 [wrapper] pilotpid: 2960041
[2025-10-13 14:54:30] 2025-10-13 12:54:30,383 [wrapper] Pilot exit status: 0
[2025-10-13 14:54:30] 2025-10-13 12:54:30,390 [wrapper] pandaids: 6840429325
[2025-10-13 14:54:30] 2025-10-13 12:54:30,405 [wrapper] cleanup supervisor_pilot 2978925 2960042
[2025-10-13 14:54:30] 2025-10-13 12:54:30,408 [wrapper] Test setup, not cleaning
[2025-10-13 14:54:30] 2025-10-13 12:54:30,410 [wrapper] apfmon messages muted
[2025-10-13 14:54:30] 2025-10-13 12:54:30,412 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:54:30] 2025-10-13 12:54:30,414 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:54:30]  *** Error codes and diagnostics ***
[2025-10-13 14:54:30]     "exeErrorCode": 0,
[2025-10-13 14:54:30]     "exeErrorDiag": "",
[2025-10-13 14:54:30]     "pilotErrorCode": 0,
[2025-10-13 14:54:30]     "pilotErrorDiag": "",
[2025-10-13 14:54:30]  *** Listing of results directory ***
[2025-10-13 14:54:30] total 413892
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc      5112 Oct 12 19:17 queuedata.json
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc    557409 Oct 12 19:17 pilot3.tar.gz
[2025-10-13 14:54:30] -rwx------ 1 boinc boinc     36292 Oct 12 19:18 runpilot2-wrapper.sh
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:54:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:30 run_atlas
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:30 job.xml
[2025-10-13 14:54:30] -rw-r--r-- 2 boinc boinc 219930958 Oct 13 13:30 EVNT.46676267._004811.pool.root.1
[2025-10-13 14:54:30] -rw-r--r-- 2 boinc boinc    569680 Oct 13 13:30 input.tar.gz
[2025-10-13 14:54:30] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:30 start_atlas.sh
[2025-10-13 14:54:30] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:30 shared
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:30 boinc_setup_complete
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc      6439 Oct 13 13:30 init_data.xml
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:30 boinc_lockfile
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc      2549 Oct 13 13:30 pandaJob.out
[2025-10-13 14:54:30] -rw------- 1 boinc boinc    972497 Oct 13 13:31 agis_schedconf.cvmfs.json
[2025-10-13 14:54:30] -rw------- 1 boinc boinc   1560580 Oct 13 13:31 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:54:30] drwx------ 5 boinc boinc      4096 Oct 13 13:31 pilot3
[2025-10-13 14:54:30] -rw------- 1 boinc boinc 198001521 Oct 13 14:53 HITS.46676269._084671.pool.root.1
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc       529 Oct 13 14:53 boinc_task_state.xml
[2025-10-13 14:54:30] -rw------- 1 boinc boinc      1017 Oct 13 14:53 memory_monitor_summary.json
[2025-10-13 14:54:30] -rw------- 1 boinc boinc    268954 Oct 13 14:53 log.46676269._084671.job.log.tgz.1
[2025-10-13 14:54:30] -rw------- 1 boinc boinc      7763 Oct 13 14:53 heartbeat.json
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc      8192 Oct 13 14:54 boinc_mmap_file
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc        27 Oct 13 14:54 wrapper_checkpoint.txt
[2025-10-13 14:54:30] -rw------- 1 boinc boinc       747 Oct 13 14:54 pilotlog.txt
[2025-10-13 14:54:30] -rw------- 1 boinc boinc        95 Oct 13 14:54 pilot_heartbeat.json
[2025-10-13 14:54:30] -rw------- 1 boinc boinc    731083 Oct 13 14:54 log.46676269._084671.job.log.1
[2025-10-13 14:54:30] -rw------- 1 boinc boinc       357 Oct 13 14:54 output.list
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc       620 Oct 13 14:54 runtime_log
[2025-10-13 14:54:30] -rw------- 1 boinc boinc   1024000 Oct 13 14:54 result.tar.gz
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc      8782 Oct 13 14:54 runtime_log.err
[2025-10-13 14:54:30] -rw------- 1 boinc boinc       659 Oct 13 14:54 GWaLDmKtES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtUUMDm8Lj9fn.diag
[2025-10-13 14:54:30] -rw-r--r-- 1 boinc boinc      8758 Oct 13 14:54 stderr.txt
[2025-10-13 14:54:30] HITS file was successfully produced:
[2025-10-13 14:54:30] -rw------- 1 boinc boinc 198001521 Oct 13 14:53 shared/HITS.pool.root.1
[2025-10-13 14:54:30]  *** Contents of shared directory: ***
[2025-10-13 14:54:30] total 409728
[2025-10-13 14:54:30] -rw-r--r-- 2 boinc boinc 219930958 Oct 13 13:30 ATLAS.root_0
[2025-10-13 14:54:30] -rw-r--r-- 2 boinc boinc    569680 Oct 13 13:30 input.tar.gz
[2025-10-13 14:54:30] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:30 start_atlas.sh
[2025-10-13 14:54:30] -rw------- 1 boinc boinc 198001521 Oct 13 14:53 HITS.pool.root.1
[2025-10-13 14:54:30] -rw------- 1 boinc boinc   1024000 Oct 13 14:54 result.tar.gz
14:54:31 (2956324): run_atlas exited; CPU time 14214.756512
14:54:31 (2956324): called boinc_finish(0)

</stderr_txt>
]]>

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