Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:55:47 (3904950): wrapper (7.7.26015): starting
19:55:47 (3904950): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:55:47] Arguments: --nthreads 8
[2025-10-12 19:55:47] Threads: 8
[2025-10-12 19:55:47] Checking for CVMFS
[2025-10-12 19:55:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:55:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:55:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:55:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:55:50] 2.13.2.0 231297 53347 355288 151641 2 401 40448634 40960001 23506 16776704 0 135789368 99.641 129268138 29295 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 19:55:50] CVMFS is ok
[2025-10-12 19:55:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:55:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:55:50] Further information can be found at the LHC@home message board.
[2025-10-12 19:55:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:55:50] Checking for apptainer binary...
[2025-10-12 19:55:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:55:50] Running /usr/bin/apptainer --version
[2025-10-12 19:55:50] apptainer version 1.4.3-1.el9
[2025-10-12 19:55:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:55:51] c6-5-7-4.aglt2.org
[2025-10-12 19:55:51] apptainer works
[2025-10-12 19:55:51] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:55:51] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:55:52] Starting ATLAS job with PandaID=6840530565
[2025-10-12 19:55:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:50:50]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:50:50] 2025-10-13 05:49:39,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:50:50] 2025-10-13 05:49:39,549 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:50:50] 2025-10-13 05:49:39,549 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:50:50] 2025-10-13 05:49:39,596 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:50:50] 2025-10-13 05:49:39,639 | INFO     | sum of square deviations: 12623570382.325575
[2025-10-13 01:50:50] 2025-10-13 05:49:39,642 | INFO     | sum of deviations: 21894150407.16281
[2025-10-13 01:50:50] 2025-10-13 05:49:39,642 | INFO     | mean x: 1760324019.9302325
[2025-10-13 01:50:50] 2025-10-13 05:49:39,642 | INFO     | mean y: 2498373.465116279
[2025-10-13 01:50:50] 2025-10-13 05:49:39,642 | INFO     | -- intersect: -3050583891.727895
[2025-10-13 01:50:50] 2025-10-13 05:49:39,642 | INFO     | intersect: -3050583891.727895
[2025-10-13 01:50:50] 2025-10-13 05:49:39,643 | INFO     | chi2: 3.8454304221039983
[2025-10-13 01:50:50] 2025-10-13 05:49:39,650 | INFO     | sum of square deviations: 12081126051.120968
[2025-10-13 01:50:50] 2025-10-13 05:49:39,653 | INFO     | sum of deviations: 66770530517.65485
[2025-10-13 01:50:50] 2025-10-13 05:49:39,653 | INFO     | mean x: 1760323867.4306784
[2025-10-13 01:50:50] 2025-10-13 05:49:39,653 | INFO     | mean y: 2510878.2831858406
[2025-10-13 01:50:50] 2025-10-13 05:49:39,653 | INFO     | -- intersect: -9726529114.667667
[2025-10-13 01:50:50] 2025-10-13 05:49:39,653 | INFO     | intersect: -9726529114.667667
[2025-10-13 01:50:50] 2025-10-13 05:49:39,657 | INFO     | chi2: 2.3326406832830453
[2025-10-13 01:50:50] 2025-10-13 05:49:39,658 | INFO     | current chi2=2.3326406832830453 (change=39.3399326672316 %)
[2025-10-13 01:50:50] 2025-10-13 05:49:39,658 | INFO     | sum of square deviations: 11554408221.128742
[2025-10-13 01:50:50] 2025-10-13 05:49:39,660 | INFO     | sum of deviations: 65500179782.82636
[2025-10-13 01:50:50] 2025-10-13 05:49:39,665 | INFO     | mean x: 1760323714.9251497
[2025-10-13 01:50:50] 2025-10-13 05:49:39,665 | INFO     | mean y: 2510510.473053892
[2025-10-13 01:50:50] 2025-10-13 05:49:39,665 | INFO     | -- intersect: -9976496427.565212
[2025-10-13 01:50:50] 2025-10-13 05:49:39,665 | INFO     | intersect: -9976496427.565212
[2025-10-13 01:50:50] 2025-10-13 05:49:39,666 | INFO     | chi2: 2.333506108818836
[2025-10-13 01:50:50] 2025-10-13 05:49:39,666 | INFO     | current chi2=2.333506108818836 (change=-0.03710067915700965 %)
[2025-10-13 01:50:50] 2025-10-13 05:49:39,666 | INFO     | right removable region: 333
[2025-10-13 01:50:50] 2025-10-13 05:49:39,666 | INFO     | sum of square deviations: 12081077861.386393
[2025-10-13 01:50:50] 2025-10-13 05:49:39,669 | INFO     | sum of deviations: -53407913309.705
[2025-10-13 01:50:50] 2025-10-13 05:49:39,669 | INFO     | mean x: 1760324172.4365783
[2025-10-13 01:50:50] 2025-10-13 05:49:39,669 | INFO     | mean y: 2519455.9439528026
[2025-10-13 01:50:50] 2025-10-13 05:49:39,669 | INFO     | -- intersect: 7784543698.910136
[2025-10-13 01:50:50] 2025-10-13 05:49:39,669 | INFO     | intersect: 7784543698.910136
[2025-10-13 01:50:50] 2025-10-13 05:49:39,670 | INFO     | chi2: 1.738599688922167
[2025-10-13 01:50:50] 2025-10-13 05:49:39,670 | INFO     | current chi2=1.738599688922167 (change=54.78790413347525 %)
[2025-10-13 01:50:50] 2025-10-13 05:49:39,670 | INFO     | sum of square deviations: 11554414870.550833
[2025-10-13 01:50:50] 2025-10-13 05:49:39,673 | INFO     | sum of deviations: -60505796128.844315
[2025-10-13 01:50:50] 2025-10-13 05:49:39,673 | INFO     | mean x: 1760324324.9341316
[2025-10-13 01:50:50] 2025-10-13 05:49:39,673 | INFO     | mean y: 2521491.416167665
[2025-10-13 01:50:50] 2025-10-13 05:49:39,673 | INFO     | -- intersect: 9220627809.943438
[2025-10-13 01:50:50] 2025-10-13 05:49:39,673 | INFO     | intersect: 9220627809.943438
[2025-10-13 01:50:50] 2025-10-13 05:49:39,674 | INFO     | chi2: 1.6972084046523277
[2025-10-13 01:50:50] 2025-10-13 05:49:39,674 | INFO     | current chi2=1.6972084046523277 (change=2.3807253926002736 %)
[2025-10-13 01:50:50] 2025-10-13 05:49:39,674 | INFO     | left removable region: 20
[2025-10-13 01:50:50] 2025-10-13 05:49:39,674 | INFO     | sum of square deviations: 9509206468.907349
[2025-10-13 01:50:50] 2025-10-13 05:49:39,676 | INFO     | sum of deviations: 12531267689.82108
[2025-10-13 01:50:50] 2025-10-13 05:49:39,676 | INFO     | mean x: 1760324294.4345047
[2025-10-13 01:50:50] 2025-10-13 05:49:39,676 | INFO     | mean y: 2525494.942492013
[2025-10-13 01:50:50] 2025-10-13 05:49:39,677 | INFO     | -- intersect: -2317236414.3799887
[2025-10-13 01:50:50] 2025-10-13 05:49:39,677 | INFO     | intersect: -2317236414.3799887
[2025-10-13 01:50:50] 2025-10-13 05:49:39,677 | INFO     | chi2: 0.003913610994116265
[2025-10-13 01:50:50] 2025-10-13 05:49:39,677 | INFO     | -- intersect: -2317236414.3799887
[2025-10-13 01:50:50] 2025-10-13 05:49:39,677 | INFO     | current memory leak: 1.32 B/s (using 313 data points, chi2=0.00)
[2025-10-13 01:50:50] 2025-10-13 05:49:39,678 | INFO     | could have reported an average CPU frequency of 2774 MHz (15 samples)
[2025-10-13 01:50:50] 2025-10-13 05:49:39,678 | INFO     | ..............................
[2025-10-13 01:50:50] 2025-10-13 05:49:39,678 | INFO     | . Timing measurements:
[2025-10-13 01:50:50] 2025-10-13 05:49:39,678 | INFO     | . get job = 0 s
[2025-10-13 01:50:50] 2025-10-13 05:49:39,678 | INFO     | . initial setup = 5 s
[2025-10-13 01:50:50] 2025-10-13 05:49:39,678 | INFO     | . payload setup = 42 s
[2025-10-13 01:50:50] 2025-10-13 05:49:39,678 | INFO     | . stage-in = 0 s
[2025-10-13 01:50:50] 2025-10-13 05:49:39,678 | INFO     | . payload execution = 20986 s
[2025-10-13 01:50:50] 2025-10-13 05:49:39,678 | INFO     | . stage-out = 7 s
[2025-10-13 01:50:50] 2025-10-13 05:49:39,678 | INFO     | . log creation = 1 s
[2025-10-13 01:50:50] 2025-10-13 05:49:39,679 | INFO     | ..............................
[2025-10-13 01:50:50] 2025-10-13 05:49:40,203 | INFO     | 
[2025-10-13 01:50:50] 2025-10-13 05:49:40,203 | INFO     | job summary report
[2025-10-13 01:50:50] 2025-10-13 05:49:40,203 | INFO     | --------------------------------------------------
[2025-10-13 01:50:50] 2025-10-13 05:49:40,203 | INFO     | PanDA job id: 6840530565
[2025-10-13 01:50:50] 2025-10-13 05:49:40,203 | INFO     | task id: 46676269
[2025-10-13 01:50:50] 2025-10-13 05:49:40,203 | INFO     | errors: (none)
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | pilot state: finished 
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | transexitcode: 0
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | exeerrorcode: 0
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | exeerrordiag: 
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | exitcode: 0
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | exitmsg: OK
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | cpuconsumptiontime: 47194 s
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | nevents: 400
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | neventsw: 0
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | pid: 3934771
[2025-10-13 01:50:50] 2025-10-13 05:49:40,204 | INFO     | pgrp: 3934771
[2025-10-13 01:50:50] 2025-10-13 05:49:40,205 | INFO     | corecount: 8
[2025-10-13 01:50:50] 2025-10-13 05:49:40,205 | INFO     | event service: False
[2025-10-13 01:50:50] 2025-10-13 05:49:40,205 | INFO     | sizes: {0: 2347978, 1: 2348663, 2: 2348862, 13: 2348862, 24: 2348918, 32: 2349208, 35: 2349364, 21033: 2382839, 21034: 2382838, 21044: 2391892, 21047: 2391948, 210
[2025-10-13 01:50:50] 2025-10-13 05:49:40,205 | INFO     | --------------------------------------------------
[2025-10-13 01:50:50] 2025-10-13 05:49:40,205 | INFO     | 
[2025-10-13 01:50:50] 2025-10-13 05:49:40,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 01:50:50] 2025-10-13 05:49:40,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:50:50] 2025-10-13 05:49:40,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:50:50] 2025-10-13 05:49:40,398 | INFO     | job 6840530565 has completed (purged errors)
[2025-10-13 01:50:50] 2025-10-13 05:49:40,398 | INFO     | overall cleanup function is called
[2025-10-13 01:50:50] 2025-10-13 05:49:41,414 | INFO     | --- collectZombieJob: --- 10, [3934771]
[2025-10-13 01:50:50] 2025-10-13 05:49:41,414 | INFO     | zombie collector waiting for pid 3934771
[2025-10-13 01:50:50] 2025-10-13 05:49:41,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:50:50] 2025-10-13 05:49:41,414 | INFO     | collected zombie processes
[2025-10-13 01:50:50] 2025-10-13 05:49:41,414 | INFO     | will attempt to kill all subprocesses of pid=3934771
[2025-10-13 01:50:50] 2025-10-13 05:49:42,058 | INFO     | process IDs to be killed: [3934771] (in reverse order)
[2025-10-13 01:50:50] 2025-10-13 05:49:42,820 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:50:50] 2025-10-13 05:49:42,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:50:50] 2025-10-13 05:49:42,915 | INFO     | did not find any defunct processes belonging to 3934771
[2025-10-13 01:50:50] 2025-10-13 05:49:42,994 | INFO     | did not find any defunct processes belonging to 3934771
[2025-10-13 01:50:50] 2025-10-13 05:49:42,994 | INFO     | ready for new job
[2025-10-13 01:50:50] 2025-10-13 05:49:42,994 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:50:50] 2025-10-13 05:49:43,017 | INFO     | ***************************************
[2025-10-13 01:50:50] 2025-10-13 05:49:43,017 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:50:50] 2025-10-13 05:49:43,017 | INFO     | ***************************************
[2025-10-13 01:50:50] 2025-10-13 05:49:43,017 | INFO     | 
[2025-10-13 01:50:50] 2025-10-13 05:49:43,041 | INFO     | architecture information:
[2025-10-13 01:50:50] 2025-10-13 05:49:43,045 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:50:50] 2025-10-13 05:49:43,126 | INFO     | cat /etc/os-release:
[2025-10-13 01:50:50] NAME="CentOS Linux"
[2025-10-13 01:50:50] VERSION="7 (Core)"
[2025-10-13 01:50:50] ID="centos"
[2025-10-13 01:50:50] ID_LIKE="rhel fedora"
[2025-10-13 01:50:50] VERSION_ID="7"
[2025-10-13 01:50:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:50:50] ANSI_COLOR="0;31"
[2025-10-13 01:50:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:50:50] HOME_URL="https://www.centos.org/"
[2025-10-13 01:50:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:50:50] 
[2025-10-13 01:50:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:50:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:50:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:50:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:50:50] 
[2025-10-13 01:50:50] 2025-10-13 05:49:43,126 | INFO     | ***************************************
[2025-10-13 01:50:50] 2025-10-13 05:49:43,631 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 01:50:50] 2025-10-13 05:49:43,679 | INFO     | sufficient remaining disk space (73166487552 B)
[2025-10-13 01:50:50] 2025-10-13 05:49:43,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:50:50] 2025-10-13 05:49:43,680 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:50:50] 2025-10-13 05:49:43,680 | INFO     | update_server=False
[2025-10-13 01:50:50] 2025-10-13 05:49:43,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:50:50] 2025-10-13 05:49:43,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:50:50] 2025-10-13 05:49:43,825 | INFO     | all payload control threads have been joined
[2025-10-13 01:50:50] 2025-10-13 05:49:43,932 | INFO     | all job control threads have been joined
[2025-10-13 01:50:50] 2025-10-13 05:49:44,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:50:50] 2025-10-13 05:49:44,261 | INFO     | aborting loop
[2025-10-13 01:50:50] 2025-10-13 05:49:44,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:50:50] 2025-10-13 05:49:44,582 | INFO     | all data control threads have been joined
[2025-10-13 01:50:50] 2025-10-13 05:49:44,694 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:44,712 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:44,712 | INFO     | [job] validate thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:44,713 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:44,831 | INFO     | [payload] control thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:44,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:50:50] 2025-10-13 05:49:44,945 | INFO     | [job] control thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:45,138 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:45,164 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:45,251 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:45,267 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:45,280 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:45,329 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:45,587 | INFO     | [data] control thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:45,689 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:45,914 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:49:48,488 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:50:50] 2025-10-13 05:50:14,064 | INFO     | PID=3913368 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:50:50] 2025-10-13 05:50:14,064 | INFO     | .. there are 29 such processes running
[2025-10-13 01:50:50] 2025-10-13 05:50:14,066 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:50:50] 2025-10-13 05:50:14,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:50:50] 2025-10-13 05:50:14,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:50:50] 2025-10-13 05:50:41,462 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:50:50] 2025-10-13 05:50:41,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139644318537536)>', '<ExcThread(monitor, started 139643588691712)>']
[2025-10-13 01:50:50] 2025-10-13 05:50:42,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:50:50] 2025-10-13 05:50:42,423 | INFO     | [monitor] control thread has ended
[2025-10-13 01:50:50] 2025-10-13 05:50:46,864 | INFO     | all workflow threads have been joined
[2025-10-13 01:50:50] 2025-10-13 05:50:46,864 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:50:50] 2025-10-13 05:50:46,864 | INFO     | traces error code: 0
[2025-10-13 01:50:50] 2025-10-13 05:50:46,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:50:50] 2025-10-13 05:50:48,616 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:50:50] 2025-10-13 05:50:48,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:50:50] 2025-10-13 05:50:48,656 [wrapper] pilotpid: 3913368
[2025-10-13 01:50:50] 2025-10-13 05:50:48,671 [wrapper] Pilot exit status: 0
[2025-10-13 01:50:50] 2025-10-13 05:50:48,781 [wrapper] pandaids: 6840530565
[2025-10-13 01:50:50] 2025-10-13 05:50:49,864 [wrapper] cleanup supervisor_pilot 1040763 3913369
[2025-10-13 01:50:50] 2025-10-13 05:50:49,920 [wrapper] Test setup, not cleaning
[2025-10-13 01:50:50] 2025-10-13 05:50:49,944 [wrapper] apfmon messages muted
[2025-10-13 01:50:50] 2025-10-13 05:50:49,962 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:50:50] 2025-10-13 05:50:49,985 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:50:50]  *** Error codes and diagnostics ***
[2025-10-13 01:50:50]     "exeErrorCode": 0,
[2025-10-13 01:50:50]     "exeErrorDiag": "",
[2025-10-13 01:50:50]     "pilotErrorCode": 0,
[2025-10-13 01:50:50]     "pilotErrorDiag": "",
[2025-10-13 01:50:50]  *** Listing of results directory ***
[2025-10-13 01:50:50] total 420320
[2025-10-13 01:50:50] -rwx------. 1 boincer umatlas     36292 Oct 12 13:57 runpilot2-wrapper.sh
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:57 queuedata.json
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:50:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:55 run_atlas
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:55 job.xml
[2025-10-13 01:50:50] -rw-r--r--. 2 boincer umatlas 221317311 Oct 12 19:55 EVNT.46676267._004225.pool.root.1
[2025-10-13 01:50:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:55 start_atlas.sh
[2025-10-13 01:50:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:55 shared
[2025-10-13 01:50:50] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 19:55 input.tar.gz
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:55 boinc_lockfile
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 19:55 pandaJob.out
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas    975603 Oct 12 19:56 agis_schedconf.cvmfs.json
[2025-10-13 01:50:50] drwx------. 5 boincer umatlas      4096 Oct 12 19:57 pilot3
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas 199017717 Oct 13 01:46 HITS.46676269._085490.pool.root.1
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas       531 Oct 13 01:46 boinc_task_state.xml
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas      6841 Oct 13 01:48 init_data.xml
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas      1043 Oct 13 01:48 memory_monitor_summary.json
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas   1560580 Oct 13 01:48 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas    541467 Oct 13 01:48 log.46676269._085490.job.log.tgz.1
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas      7824 Oct 13 01:49 heartbeat.json
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas        95 Oct 13 01:50 pilot_heartbeat.json
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas      4824 Oct 13 01:50 pilotlog.txt
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 01:50 boinc_mmap_file
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas        28 Oct 13 01:50 wrapper_checkpoint.txt
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas   2541021 Oct 13 01:50 log.46676269._085490.job.log.1
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas       357 Oct 13 01:50 output.list
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas       620 Oct 13 01:50 runtime_log
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas   3102720 Oct 13 01:50 result.tar.gz
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas       657 Oct 13 01:50 UIMODmEVFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmDcUMDm76WCtn.diag
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 01:50 runtime_log.err
[2025-10-13 01:50:50] -rw-r--r--. 1 boincer umatlas     21029 Oct 13 01:50 stderr.txt
[2025-10-13 01:50:50] HITS file was successfully produced:
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas 199017717 Oct 13 01:46 shared/HITS.pool.root.1
[2025-10-13 01:50:50]  *** Contents of shared directory: ***
[2025-10-13 01:50:50] total 414100
[2025-10-13 01:50:50] -rw-r--r--. 2 boincer umatlas 221317311 Oct 12 19:55 ATLAS.root_0
[2025-10-13 01:50:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:55 start_atlas.sh
[2025-10-13 01:50:50] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 19:55 input.tar.gz
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas 199017717 Oct 13 01:46 HITS.pool.root.1
[2025-10-13 01:50:50] -rw-------. 1 boincer umatlas   3102720 Oct 13 01:50 result.tar.gz
01:50:52 (3904950): run_atlas exited; CPU time 47938.996987
01:50:52 (3904950): called boinc_finish(0)

</stderr_txt>
]]>

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