Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:32:02 (3368872): wrapper (7.7.26015): starting
09:32:02 (3368872): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 09:32:02] Arguments: --nthreads 3
[2025-10-13 09:32:02] Threads: 3
[2025-10-13 09:32:02] Checking for CVMFS
[2025-10-13 09:32:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:32:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:32:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:32:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:32:03] 2.9.2.0 3205981 571 59596 151653 2 57 30726354 36864000 0 130560 0 426257 99.991 19939 570 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 09:32:03] CVMFS is ok
[2025-10-13 09:32:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:32:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:32:03] Further information can be found at the LHC@home message board.
[2025-10-13 09:32:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:32:03] Checking for apptainer binary...
[2025-10-13 09:32:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:32:03] Running /usr/bin/apptainer --version
[2025-10-13 09:32:03] apptainer version 1.4.1-1.1
[2025-10-13 09:32:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:32:03] thA335
[2025-10-13 09:32:03] apptainer works
[2025-10-13 09:32:03] Set ATHENA_PROC_NUMBER=3
[2025-10-13 09:32:03] Set ATHENA_CORE_NUMBER=3
[2025-10-13 09:32:03] Starting ATLAS job with PandaID=6840714647
[2025-10-13 09:32:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:13:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:13:40] 2025-10-13 09:13:22,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:13:40] 2025-10-13 09:13:22,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:13:40] 2025-10-13 09:13:22,910 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:13:40] 2025-10-13 09:13:22,910 | INFO     | aborting loop
[2025-10-13 11:13:40] 2025-10-13 09:13:23,426 | INFO     | all data control threads have been joined
[2025-10-13 11:13:40] 2025-10-13 09:13:23,624 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:23,624 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:23,677 | INFO     | all job control threads have been joined
[2025-10-13 11:13:40] 2025-10-13 09:13:23,774 | INFO     | all payload control threads have been joined
[2025-10-13 11:13:40] 2025-10-13 09:13:23,827 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:23,869 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:23,916 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:24,332 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:24,432 | INFO     | [data] control thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:24,624 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:24,683 | INFO     | [job] control thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:24,780 | INFO     | [payload] control thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:24,949 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:25,005 | INFO     | [job] validate thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:25,076 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:25,104 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:25,529 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:13:40] 2025-10-13 09:13:25,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:13:40] 2025-10-13 09:13:29,622 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:33,095 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:13:40] 2025-10-13 09:13:34,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:13:40] 2025-10-13 09:13:35,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140490604025664)>', '<ExcThread(monitor, started 140489965684480)>']
[2025-10-13 11:13:40] 2025-10-13 09:13:36,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:13:40] 2025-10-13 09:13:36,694 | INFO     | [monitor] control thread has ended
[2025-10-13 11:13:40] 2025-10-13 09:13:40,739 | INFO     | all workflow threads have been joined
[2025-10-13 11:13:40] 2025-10-13 09:13:40,739 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:13:40] 2025-10-13 09:13:40,740 | INFO     | traces error code: 0
[2025-10-13 11:13:40] 2025-10-13 09:13:40,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:13:40] 2025-10-13 09:13:40,788 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:13:40] 2025-10-13 09:13:40,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:13:40] 2025-10-13 09:13:40,793 [wrapper] pilotpid: 3372597
[2025-10-13 11:13:40] 2025-10-13 09:13:40,796 [wrapper] Pilot exit status: 0
[2025-10-13 11:13:40] 2025-10-13 09:13:40,803 [wrapper] pandaids: 6840714647
[2025-10-13 11:13:40] 2025-10-13 09:13:40,819 [wrapper] cleanup supervisor_pilot 3391627 3372598
[2025-10-13 11:13:40] 2025-10-13 09:13:40,822 [wrapper] Test setup, not cleaning
[2025-10-13 11:13:40] 2025-10-13 09:13:40,825 [wrapper] apfmon messages muted
[2025-10-13 11:13:40] 2025-10-13 09:13:40,828 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:13:40] 2025-10-13 09:13:40,830 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:13:40]  *** Error codes and diagnostics ***
[2025-10-13 11:13:40]     "exeErrorCode": 0,
[2025-10-13 11:13:40]     "exeErrorDiag": "",
[2025-10-13 11:13:40]     "pilotErrorCode": 0,
[2025-10-13 11:13:40]     "pilotErrorDiag": "",
[2025-10-13 11:13:40]  *** Listing of results directory ***
[2025-10-13 11:13:40] total 421936
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc    557409 Oct 12 21:50 pilot3.tar.gz
[2025-10-13 11:13:40] -rwx------ 1 boinc boinc     36292 Oct 12 21:57 runpilot2-wrapper.sh
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc      5112 Oct 12 21:57 queuedata.json
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:13:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:32 run_atlas
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:32 job.xml
[2025-10-13 11:13:40] -rw-r--r-- 2 boinc boinc 222733247 Oct 13 09:32 EVNT.46676267._004476.pool.root.1
[2025-10-13 11:13:40] -rw-r--r-- 2 boinc boinc    569678 Oct 13 09:32 input.tar.gz
[2025-10-13 11:13:40] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:32 start_atlas.sh
[2025-10-13 11:13:40] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:32 shared
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:32 boinc_setup_complete
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc      6195 Oct 13 09:32 init_data.xml
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:32 boinc_lockfile
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc      2550 Oct 13 09:32 pandaJob.out
[2025-10-13 11:13:40] -rw------- 1 boinc boinc    972849 Oct 13 09:32 agis_schedconf.cvmfs.json
[2025-10-13 11:13:40] -rw------- 1 boinc boinc   1560580 Oct 13 09:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:13:40] drwx------ 5 boinc boinc      4096 Oct 13 09:32 pilot3
[2025-10-13 11:13:40] -rw------- 1 boinc boinc        95 Oct 13 11:12 pilot_heartbeat.json
[2025-10-13 11:13:40] -rw------- 1 boinc boinc 203142169 Oct 13 11:12 HITS.46676269._088043.pool.root.1
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc       529 Oct 13 11:12 boinc_task_state.xml
[2025-10-13 11:13:40] -rw------- 1 boinc boinc      1018 Oct 13 11:13 memory_monitor_summary.json
[2025-10-13 11:13:40] -rw------- 1 boinc boinc    271717 Oct 13 11:13 log.46676269._088043.job.log.tgz.1
[2025-10-13 11:13:40] -rw------- 1 boinc boinc      7760 Oct 13 11:13 heartbeat.json
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:13 boinc_mmap_file
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc        27 Oct 13 11:13 wrapper_checkpoint.txt
[2025-10-13 11:13:40] -rw------- 1 boinc boinc      4628 Oct 13 11:13 pilotlog.txt
[2025-10-13 11:13:40] -rw------- 1 boinc boinc    879852 Oct 13 11:13 log.46676269._088043.job.log.1
[2025-10-13 11:13:40] -rw------- 1 boinc boinc       357 Oct 13 11:13 output.list
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc       620 Oct 13 11:13 runtime_log
[2025-10-13 11:13:40] -rw------- 1 boinc boinc   1167360 Oct 13 11:13 result.tar.gz
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc      8777 Oct 13 11:13 runtime_log.err
[2025-10-13 11:13:40] -rw------- 1 boinc boinc       658 Oct 13 11:13 itsKDmwMHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmItUMDmKd1xIm.diag
[2025-10-13 11:13:40] -rw-r--r-- 1 boinc boinc      6730 Oct 13 11:13 stderr.txt
[2025-10-13 11:13:40] HITS file was successfully produced:
[2025-10-13 11:13:40] -rw------- 1 boinc boinc 203142169 Oct 13 11:12 shared/HITS.pool.root.1
[2025-10-13 11:13:40]  *** Contents of shared directory: ***
[2025-10-13 11:13:40] total 417624
[2025-10-13 11:13:40] -rw-r--r-- 2 boinc boinc 222733247 Oct 13 09:32 ATLAS.root_0
[2025-10-13 11:13:40] -rw-r--r-- 2 boinc boinc    569678 Oct 13 09:32 input.tar.gz
[2025-10-13 11:13:40] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:32 start_atlas.sh
[2025-10-13 11:13:40] -rw------- 1 boinc boinc 203142169 Oct 13 11:12 HITS.pool.root.1
[2025-10-13 11:13:40] -rw------- 1 boinc boinc   1167360 Oct 13 11:13 result.tar.gz
11:13:42 (3368872): run_atlas exited; CPU time 17400.028722
11:13:42 (3368872): called boinc_finish(0)

</stderr_txt>
]]>

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