Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:10:28 (2836912): wrapper (7.7.26015): starting
03:10:28 (2836912): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 03:10:28] Arguments: --nthreads 12
[2025-10-13 03:10:28] Threads: 12
[2025-10-13 03:10:28] Checking for CVMFS
[2025-10-13 03:10:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:10:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:10:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:10:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:10:29] 2.13.2.0 8715 29810 237548 151642 0 188 40413604 46080000 6205 130560 0 202251671 99.891 56059126 21596 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-13 03:10:29] CVMFS is ok
[2025-10-13 03:10:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:10:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:10:29] Further information can be found at the LHC@home message board.
[2025-10-13 03:10:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:10:29] Checking for apptainer binary...
[2025-10-13 03:10:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:10:29] Running /usr/bin/apptainer --version
[2025-10-13 03:10:29] apptainer version 1.4.2-1.el9
[2025-10-13 03:10:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:10:29] mff2104.farm.particle.cz
[2025-10-13 03:10:29] apptainer works
[2025-10-13 03:10:29] Set ATHENA_PROC_NUMBER=12
[2025-10-13 03:10:29] Set ATHENA_CORE_NUMBER=12
[2025-10-13 03:10:29] Starting ATLAS job with PandaID=6840390824
[2025-10-13 03:10:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:07:53]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:07:53] 2025-10-13 02:06:47,438 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 04:07:53] 2025-10-13 02:06:47,438 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 04:07:53] 2025-10-13 02:06:47,439 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4157573 B
[2025-10-13 04:07:53] 2025-10-13 02:06:47,439 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15299 B
[2025-10-13 04:07:53] 2025-10-13 02:06:47,439 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-10-13 04:07:53] 2025-10-13 02:06:47,463 | INFO     | sufficient remaining disk space (1681197629440 B)
[2025-10-13 04:07:53] 2025-10-13 02:06:47,463 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 04:07:53] 2025-10-13 02:06:47,464 | INFO     | size of work directory /scratch/.boinc/slots/2/PanDA_Pilot-6840390824: 4446070 B (within 2537553920 B limit)
[2025-10-13 04:07:53] 2025-10-13 02:06:47,465 | INFO     | pfn file=/scratch/.boinc/slots/2/PanDA_Pilot-6840390824/HITS.46676269._083596.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 04:07:53] 2025-10-13 02:06:47,465 | INFO     | total size of present files: 0 B (workdir size: 4446070 B)
[2025-10-13 04:07:53] 2025-10-13 02:06:47,465 | INFO     | output file size check: skipping output file /scratch/.boinc/slots/2/PanDA_Pilot-6840390824/HITS.46676269._083596.pool.root.1 since it does not exist
[2025-10-13 04:07:53] 2025-10-13 02:06:47,817 | INFO     | number of running child processes to parent process 2848095: 1
[2025-10-13 04:07:53] 2025-10-13 02:06:47,817 | INFO     | maximum number of monitored processes: 6
[2025-10-13 04:07:53] 2025-10-13 02:06:47,923 | INFO     | time since job start (3366s) is within the limit (172800.0s)
[2025-10-13 04:07:53] 2025-10-13 02:06:48,920 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 04:07:53] 2025-10-13 02:06:49,934 | INFO     | time since job start (3368s) is within the limit (172800.0s)
[2025-10-13 04:07:53] 2025-10-13 02:06:49,934 | INFO     | job 6840390824 has state=finished
[2025-10-13 04:07:53] 2025-10-13 02:06:49,935 | INFO     | preparing for final server update for job 6840390824 in state='finished'
[2025-10-13 04:07:53] 2025-10-13 02:06:50,319 | INFO     | monitor loop #248: job 0:6840390824 is in state 'finished'
[2025-10-13 04:07:53] 2025-10-13 02:06:50,320 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:07:53] 2025-10-13 02:06:50,480 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 04:07:53] 2025-10-13 02:06:50,481 | INFO     | this job has now completed (state=finished)
[2025-10-13 04:07:53] 2025-10-13 02:06:50,481 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 04:07:53] 2025-10-13 02:06:50,481 | INFO     | log transfer has been attempted: DONE
[2025-10-13 04:07:53] 2025-10-13 02:06:50,481 | INFO     | job 6840390824 has finished - writing final server update
[2025-10-13 04:07:53] 2025-10-13 02:06:50,481 | INFO     | total number of processed events: 400 (read)
[2025-10-13 04:07:53] 2025-10-13 02:06:50,482 | INFO     | executing command: lscpu
[2025-10-13 04:07:53] 2025-10-13 02:06:50,564 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 04:07:53] 2025-10-13 02:06:51,941 | INFO     | time since job start (3370s) is within the limit (172800.0s)
[2025-10-13 04:07:53] 2025-10-13 02:06:52,823 | INFO     | monitor loop #249: job 0:6840390824 is in state 'finished'
[2025-10-13 04:07:53] 2025-10-13 02:06:52,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:07:53] 2025-10-13 02:06:53,947 | INFO     | time since job start (3372s) is within the limit (172800.0s)
[2025-10-13 04:07:53] 2025-10-13 02:06:55,326 | INFO     | monitor loop #250: job 0:6840390824 is in state 'finished'
[2025-10-13 04:07:53] 2025-10-13 02:06:55,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:07:53] 2025-10-13 02:06:55,951 | INFO     | time since job start (3374s) is within the limit (172800.0s)
[2025-10-13 04:07:53] 2025-10-13 02:06:56,000 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 04:07:53] 2025-10-13 02:06:56,014 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2742.978885416667
[2025-10-13 04:07:53] 2025-10-13 02:06:56,033 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6840390824/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:07:53] 2025-10-13 02:06:56,033 | INFO     | extracted standard info from prmon json
[2025-10-13 04:07:53] 2025-10-13 02:06:56,033 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:07:53] 2025-10-13 02:06:56,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:07:53] 2025-10-13 02:06:56,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:07:53] 2025-10-13 02:06:56,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:07:53] 2025-10-13 02:06:56,035 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:07:53] 2025-10-13 02:06:56,036 | INFO     | sum of square deviations: 34277852.0
[2025-10-13 04:07:53] 2025-10-13 02:06:56,036 | INFO     | sum of deviations: 393993052.5
[2025-10-13 04:07:53] 2025-10-13 02:06:56,036 | INFO     | mean x: 1760319607.5
[2025-10-13 04:07:53] 2025-10-13 02:06:56,036 | INFO     | mean y: 2702011.7708333335
[2025-10-13 04:07:53] 2025-10-13 02:06:56,036 | INFO     | -- intersect: -20230587271.77374
[2025-10-13 04:07:53] 2025-10-13 02:06:56,036 | INFO     | intersect: -20230587271.77374
[2025-10-13 04:07:53] 2025-10-13 02:06:56,036 | INFO     | chi2: 0.0023069905941820535
[2025-10-13 04:07:53] 2025-10-13 02:06:56,036 | INFO     | -- intersect: -20230587271.77374
[2025-10-13 04:07:53] 2025-10-13 02:06:56,037 | INFO     | current memory leak: 11.49 B/s (using 48 data points, chi2=0.00)
[2025-10-13 04:07:53] 2025-10-13 02:06:56,037 | INFO     | could have reported an average CPU frequency of 2747 MHz (5 samples)
[2025-10-13 04:07:53] 2025-10-13 02:06:56,037 | INFO     | ..............................
[2025-10-13 04:07:53] 2025-10-13 02:06:56,037 | INFO     | . Timing measurements:
[2025-10-13 04:07:53] 2025-10-13 02:06:56,037 | INFO     | . get job = 0 s
[2025-10-13 04:07:53] 2025-10-13 02:06:56,037 | INFO     | . initial setup = 1 s
[2025-10-13 04:07:53] 2025-10-13 02:06:56,037 | INFO     | . payload setup = 6 s
[2025-10-13 04:07:53] 2025-10-13 02:06:56,037 | INFO     | . stage-in = 0 s
[2025-10-13 04:07:53] 2025-10-13 02:06:56,037 | INFO     | . payload execution = 3337 s
[2025-10-13 04:07:53] 2025-10-13 02:06:56,038 | INFO     | . stage-out = 0 s
[2025-10-13 04:07:53] 2025-10-13 02:06:56,038 | INFO     | . log creation = 0 s
[2025-10-13 04:07:53] 2025-10-13 02:06:56,038 | INFO     | ..............................
[2025-10-13 04:07:53] 2025-10-13 02:06:56,407 | INFO     | 
[2025-10-13 04:07:53] 2025-10-13 02:06:56,407 | INFO     | job summary report
[2025-10-13 04:07:53] 2025-10-13 02:06:56,407 | INFO     | --------------------------------------------------
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | PanDA job id: 6840390824
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | task id: 46676269
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | errors: (none)
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | pilot state: finished 
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | transexitcode: 0
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | exeerrorcode: 0
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | exeerrordiag: 
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | exitcode: 0
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | exitmsg: OK
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | cpuconsumptiontime: 35042 s
[2025-10-13 04:07:53] 2025-10-13 02:06:56,408 | INFO     | nevents: 400
[2025-10-13 04:07:53] 2025-10-13 02:06:56,409 | INFO     | neventsw: 0
[2025-10-13 04:07:53] 2025-10-13 02:06:56,409 | INFO     | pid: 2848095
[2025-10-13 04:07:53] 2025-10-13 02:06:56,409 | INFO     | pgrp: 2848095
[2025-10-13 04:07:53] 2025-10-13 02:06:56,409 | INFO     | corecount: 12
[2025-10-13 04:07:53] 2025-10-13 02:06:56,409 | INFO     | event service: False
[2025-10-13 04:07:53] 2025-10-13 02:06:56,409 | INFO     | sizes: {0: 2348858, 5: 2349120, 11: 2349176, 3347: 2374769, 3348: 2383769, 3351: 2383949, 3358: 2384303}
[2025-10-13 04:07:53] 2025-10-13 02:06:56,409 | INFO     | --------------------------------------------------
[2025-10-13 04:07:53] 2025-10-13 02:06:56,409 | INFO     | 
[2025-10-13 04:07:53] 2025-10-13 02:06:56,409 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-10-13 04:07:53] 2025-10-13 02:06:56,437 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,437 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,439 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,439 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:07:53] 2025-10-13 02:06:56,439 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,439 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:07:53] 2025-10-13 02:06:56,439 | INFO     | job 6840390824 has completed (purged errors)
[2025-10-13 04:07:53] 2025-10-13 02:06:56,439 | INFO     | overall cleanup function is called
[2025-10-13 04:07:53] 2025-10-13 02:06:57,449 | INFO     | --- collectZombieJob: --- 10, [2848095]
[2025-10-13 04:07:53] 2025-10-13 02:06:57,450 | INFO     | zombie collector waiting for pid 2848095
[2025-10-13 04:07:53] 2025-10-13 02:06:57,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:07:53] 2025-10-13 02:06:57,450 | INFO     | collected zombie processes
[2025-10-13 04:07:53] 2025-10-13 02:06:57,450 | INFO     | will attempt to kill all subprocesses of pid=2848095
[2025-10-13 04:07:53] 2025-10-13 02:06:57,809 | INFO     | process IDs to be killed: [2848095] (in reverse order)
[2025-10-13 04:07:53] 2025-10-13 02:06:57,925 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:07:53] 2025-10-13 02:06:57,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:07:53] 2025-10-13 02:06:57,939 | INFO     | did not find any defunct processes belonging to 2848095
[2025-10-13 04:07:53] 2025-10-13 02:06:57,949 | INFO     | did not find any defunct processes belonging to 2848095
[2025-10-13 04:07:53] 2025-10-13 02:06:57,949 | INFO     | ready for new job
[2025-10-13 04:07:53] 2025-10-13 02:06:57,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:07:53] 2025-10-13 02:06:57,951 | INFO     | ***************************************
[2025-10-13 04:07:53] 2025-10-13 02:06:57,951 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:07:53] 2025-10-13 02:06:57,951 | INFO     | ***************************************
[2025-10-13 04:07:53] 2025-10-13 02:06:57,951 | INFO     | 
[2025-10-13 04:07:53] 2025-10-13 02:06:57,958 | INFO     | architecture information:
[2025-10-13 04:07:53] 2025-10-13 02:06:57,958 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:07:53] 2025-10-13 02:06:57,983 | INFO     | cat /etc/os-release:
[2025-10-13 04:07:53] NAME="CentOS Linux"
[2025-10-13 04:07:53] VERSION="7 (Core)"
[2025-10-13 04:07:53] ID="centos"
[2025-10-13 04:07:53] ID_LIKE="rhel fedora"
[2025-10-13 04:07:53] VERSION_ID="7"
[2025-10-13 04:07:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:07:53] ANSI_COLOR="0;31"
[2025-10-13 04:07:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:07:53] HOME_URL="https://www.centos.org/"
[2025-10-13 04:07:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:07:53] 
[2025-10-13 04:07:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:07:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:07:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:07:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:07:53] 
[2025-10-13 04:07:53] 2025-10-13 02:06:57,983 | INFO     | ***************************************
[2025-10-13 04:07:53] 2025-10-13 02:06:58,485 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-10-13 04:07:53] 2025-10-13 02:06:58,514 | INFO     | sufficient remaining disk space (1681196580864 B)
[2025-10-13 04:07:53] 2025-10-13 02:06:58,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:07:53] 2025-10-13 02:06:58,514 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:07:53] 2025-10-13 02:06:58,514 | INFO     | update_server=False
[2025-10-13 04:07:53] 2025-10-13 02:06:58,515 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:07:53] 2025-10-13 02:06:58,830 | INFO     | all data control threads have been joined
[2025-10-13 04:07:53] 2025-10-13 02:06:58,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:07:53] 2025-10-13 02:06:58,835 | INFO     | aborting loop
[2025-10-13 04:07:53] 2025-10-13 02:06:59,444 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:07:53] 2025-10-13 02:06:59,520 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:06:59,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:07:53] 2025-10-13 02:06:59,590 | INFO     | all job control threads have been joined
[2025-10-13 04:07:53] 2025-10-13 02:06:59,836 | INFO     | [data] control thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:06:59,839 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:06:59,898 | INFO     | all payload control threads have been joined
[2025-10-13 04:07:53] 2025-10-13 02:06:59,927 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:06:59,995 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:00,006 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:00,595 | INFO     | [job] control thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:00,653 | INFO     | [job] validate thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:00,904 | INFO     | [payload] control thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:00,917 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:00,985 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:00,999 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:01,143 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:07:53] 2025-10-13 02:07:01,450 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:02,149 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:03,534 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:09,021 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:07:53] 2025-10-13 02:07:10,027 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:07:53] 2025-10-13 02:07:29,449 | INFO     | PID=2840984 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:07:53] 2025-10-13 02:07:29,449 | INFO     | .. there are 8 such processes running
[2025-10-13 04:07:53] 2025-10-13 02:07:29,449 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:07:53] 2025-10-13 02:07:29,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:07:53] 2025-10-13 02:07:29,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:07:53] 2025-10-13 02:07:46,349 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:07:53] 2025-10-13 02:07:48,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139709710767936)>', '<ExcThread(monitor, started 139709204375296)>']
[2025-10-13 04:07:53] 2025-10-13 02:07:48,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:07:53] 2025-10-13 02:07:48,537 | INFO     | [monitor] control thread has ended
[2025-10-13 04:07:53] 2025-10-13 02:07:53,435 | INFO     | all workflow threads have been joined
[2025-10-13 04:07:53] 2025-10-13 02:07:53,436 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:07:53] 2025-10-13 02:07:53,436 | INFO     | traces error code: 0
[2025-10-13 04:07:53] 2025-10-13 02:07:53,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:07:53] 2025-10-13 02:07:53,620 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:07:53] 2025-10-13 02:07:53,624 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:07:53] 2025-10-13 02:07:53,628 [wrapper] pilotpid: 2840984
[2025-10-13 04:07:53] 2025-10-13 02:07:53,631 [wrapper] Pilot exit status: 0
[2025-10-13 04:07:53] 2025-10-13 02:07:53,643 [wrapper] pandaids: 6840390824
[2025-10-13 04:07:53] 2025-10-13 02:07:53,731 [wrapper] cleanup supervisor_pilot 3000829 2840985
[2025-10-13 04:07:53] 2025-10-13 02:07:53,735 [wrapper] Test setup, not cleaning
[2025-10-13 04:07:53] 2025-10-13 02:07:53,738 [wrapper] apfmon messages muted
[2025-10-13 04:07:53] 2025-10-13 02:07:53,742 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:07:53] 2025-10-13 02:07:53,745 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:07:53]  *** Error codes and diagnostics ***
[2025-10-13 04:07:53]     "exeErrorCode": 0,
[2025-10-13 04:07:53]     "exeErrorDiag": "",
[2025-10-13 04:07:53]     "pilotErrorCode": 0,
[2025-10-13 04:07:53]     "pilotErrorDiag": "",
[2025-10-13 04:07:53]  *** Listing of results directory ***
[2025-10-13 04:07:53] total 410228
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:01 pilot3.tar.gz
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc      5112 Oct 12 18:34 queuedata.json
[2025-10-13 04:07:53] -rwx------ 1 boinc boinc     36292 Oct 12 18:35 runpilot2-wrapper.sh
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:07:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:10 run_atlas
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:10 job.xml
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc      6665 Oct 13 03:10 init_data.xml
[2025-10-13 04:07:53] -rw-r--r-- 2 boinc boinc 219877655 Oct 13 03:10 EVNT.46676267._004746.pool.root.1
[2025-10-13 04:07:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:10 start_atlas.sh
[2025-10-13 04:07:53] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:10 shared
[2025-10-13 04:07:53] -rw-r--r-- 2 boinc boinc    569681 Oct 13 03:10 input.tar.gz
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:10 boinc_lockfile
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc      2550 Oct 13 03:10 pandaJob.out
[2025-10-13 04:07:53] -rw------- 1 boinc boinc    975603 Oct 13 03:10 agis_schedconf.cvmfs.json
[2025-10-13 04:07:53] -rw------- 1 boinc boinc   1560580 Oct 13 03:10 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:07:53] drwx------ 5 boinc boinc      4096 Oct 13 03:10 pilot3
[2025-10-13 04:07:53] -rw------- 1 boinc boinc 194540173 Oct 13 04:06 HITS.46676269._083596.pool.root.1
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc       530 Oct 13 04:06 boinc_task_state.xml
[2025-10-13 04:07:53] -rw------- 1 boinc boinc      1022 Oct 13 04:06 memory_monitor_summary.json
[2025-10-13 04:07:53] -rw------- 1 boinc boinc    363885 Oct 13 04:06 log.46676269._083596.job.log.tgz.1
[2025-10-13 04:07:53] -rw------- 1 boinc boinc        95 Oct 13 04:06 pilot_heartbeat.json
[2025-10-13 04:07:53] -rw------- 1 boinc boinc      7781 Oct 13 04:06 heartbeat.json
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:07 wrapper_checkpoint.txt
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:07 boinc_mmap_file
[2025-10-13 04:07:53] -rw------- 1 boinc boinc      4898 Oct 13 04:07 pilotlog.txt
[2025-10-13 04:07:53] -rw------- 1 boinc boinc    509563 Oct 13 04:07 log.46676269._083596.job.log.1
[2025-10-13 04:07:53] -rw------- 1 boinc boinc       357 Oct 13 04:07 output.list
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc       620 Oct 13 04:07 runtime_log
[2025-10-13 04:07:53] -rw------- 1 boinc boinc    890880 Oct 13 04:07 result.tar.gz
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc      8764 Oct 13 04:07 runtime_log.err
[2025-10-13 04:07:53] -rw------- 1 boinc boinc       662 Oct 13 04:07 10wMDmUDES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzfkNDmWMzYbm.diag
[2025-10-13 04:07:53] -rw-r--r-- 1 boinc boinc     22355 Oct 13 04:07 stderr.txt
[2025-10-13 04:07:53] HITS file was successfully produced:
[2025-10-13 04:07:53] -rw------- 1 boinc boinc 194540173 Oct 13 04:06 shared/HITS.pool.root.1
[2025-10-13 04:07:53]  *** Contents of shared directory: ***
[2025-10-13 04:07:53] total 406168
[2025-10-13 04:07:53] -rw-r--r-- 2 boinc boinc 219877655 Oct 13 03:10 ATLAS.root_0
[2025-10-13 04:07:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:10 start_atlas.sh
[2025-10-13 04:07:53] -rw-r--r-- 2 boinc boinc    569681 Oct 13 03:10 input.tar.gz
[2025-10-13 04:07:53] -rw------- 1 boinc boinc 194540173 Oct 13 04:06 HITS.pool.root.1
[2025-10-13 04:07:53] -rw------- 1 boinc boinc    890880 Oct 13 04:07 result.tar.gz
04:07:55 (2836912): run_atlas exited; CPU time 35111.605588
04:07:55 (2836912): called boinc_finish(0)

</stderr_txt>
]]>

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