Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:23:57 (43598): wrapper (7.7.26015): starting
17:23:57 (43598): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:23:57] Arguments: --nthreads 8
[2025-10-12 17:23:57] Threads: 8
[2025-10-12 17:23:57] Checking for CVMFS
[2025-10-12 17:23:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:23:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:23:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:23:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:23:58] 2.11.2.0 5808 106107 98548 151638 2 57 15675066 18432001 2749 130560 0 66754162 99.978 4085163 4214 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 17:23:58] CVMFS is ok
[2025-10-12 17:23:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:23:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:23:58] Further information can be found at the LHC@home message board.
[2025-10-12 17:23:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:23:58] Checking for apptainer binary...
[2025-10-12 17:23:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:23:58] Running /usr/bin/apptainer --version
[2025-10-12 17:23:58] apptainer version 1.3.2-1.el7
[2025-10-12 17:23:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:23:58] c-9-34.aglt2.org
[2025-10-12 17:23:58] apptainer works
[2025-10-12 17:23:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:23:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:23:58] Starting ATLAS job with PandaID=6840530514
[2025-10-12 17:23:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:07:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:07:32] 2025-10-13 00:06:46,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:07:32] 2025-10-13 00:06:46,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:07:32] 2025-10-13 00:06:46,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:07:32] 2025-10-13 00:06:46,389 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:07:32] 2025-10-13 00:06:46,389 | INFO     | sum of square deviations: 1270051720.0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,390 | INFO     | sum of deviations: -19163266571.0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,391 | INFO     | mean x: 1760309124.5
[2025-10-12 20:07:32] 2025-10-13 00:06:46,391 | INFO     | mean y: 2505634.1125
[2025-10-12 20:07:32] 2025-10-13 00:06:46,391 | INFO     | -- intersect: 26563056254.96212
[2025-10-12 20:07:32] 2025-10-13 00:06:46,391 | INFO     | intersect: 26563056254.96212
[2025-10-12 20:07:32] 2025-10-13 00:06:46,391 | INFO     | chi2: 2.2963986658253166
[2025-10-12 20:07:32] 2025-10-13 00:06:46,392 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,393 | INFO     | sum of deviations: -7850246404.000002
[2025-10-12 20:07:32] 2025-10-13 00:06:46,393 | INFO     | mean x: 1760308972.0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,394 | INFO     | mean y: 2520233.729032258
[2025-10-12 20:07:32] 2025-10-13 00:06:46,394 | INFO     | -- intersect: 11970387112.428558
[2025-10-12 20:07:32] 2025-10-13 00:06:46,394 | INFO     | intersect: 11970387112.428558
[2025-10-12 20:07:32] 2025-10-13 00:06:46,394 | INFO     | chi2: 1.526105322401344
[2025-10-12 20:07:32] 2025-10-13 00:06:46,394 | INFO     | current chi2=1.526105322401344 (change=33.54353731725114 %)
[2025-10-12 20:07:32] 2025-10-13 00:06:46,395 | INFO     | sum of square deviations: 1046484737.5
[2025-10-12 20:07:32] 2025-10-13 00:06:46,396 | INFO     | sum of deviations: -7263942769.0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,396 | INFO     | mean x: 1760308819.5
[2025-10-12 20:07:32] 2025-10-13 00:06:46,396 | INFO     | mean y: 2521060.546666667
[2025-10-12 20:07:32] 2025-10-13 00:06:46,396 | INFO     | -- intersect: 12221316101.132675
[2025-10-12 20:07:32] 2025-10-13 00:06:46,397 | INFO     | intersect: 12221316101.132675
[2025-10-12 20:07:32] 2025-10-13 00:06:46,397 | INFO     | chi2: 1.525584647886362
[2025-10-12 20:07:32] 2025-10-13 00:06:46,397 | INFO     | current chi2=1.525584647886362 (change=0.03411786246593253 %)
[2025-10-12 20:07:32] 2025-10-13 00:06:46,397 | INFO     | right removable region: 149
[2025-10-12 20:07:32] 2025-10-13 00:06:46,398 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,399 | INFO     | sum of deviations: -41338693866.0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,399 | INFO     | mean x: 1760309277.0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,399 | INFO     | mean y: 2534492.7741935486
[2025-10-12 20:07:32] 2025-10-13 00:06:46,399 | INFO     | -- intersect: 63024259593.78027
[2025-10-12 20:07:32] 2025-10-13 00:06:46,399 | INFO     | intersect: 63024259593.78027
[2025-10-12 20:07:32] 2025-10-13 00:06:46,400 | INFO     | chi2: 0.9486247898237166
[2025-10-12 20:07:32] 2025-10-13 00:06:46,400 | INFO     | current chi2=0.9486247898237166 (change=58.6907620205055 %)
[2025-10-12 20:07:32] 2025-10-13 00:06:46,400 | INFO     | sum of square deviations: 1046484737.5
[2025-10-12 20:07:32] 2025-10-13 00:06:46,401 | INFO     | sum of deviations: -38738212107.5
[2025-10-12 20:07:32] 2025-10-13 00:06:46,402 | INFO     | mean x: 1760309429.5
[2025-10-12 20:07:32] 2025-10-13 00:06:46,402 | INFO     | mean y: 2530768.526666667
[2025-10-12 20:07:32] 2025-10-13 00:06:46,402 | INFO     | -- intersect: 65164723403.756874
[2025-10-12 20:07:32] 2025-10-13 00:06:46,402 | INFO     | intersect: 65164723403.756874
[2025-10-12 20:07:32] 2025-10-13 00:06:46,402 | INFO     | chi2: 0.9386121413746561
[2025-10-12 20:07:32] 2025-10-13 00:06:46,403 | INFO     | current chi2=0.9386121413746561 (change=1.055490912368116 %)
[2025-10-12 20:07:32] 2025-10-13 00:06:46,403 | INFO     | left removable region: 20
[2025-10-12 20:07:32] 2025-10-13 00:06:46,403 | INFO     | sum of square deviations: 665612480.0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,404 | INFO     | sum of deviations: -17696953146.000004
[2025-10-12 20:07:32] 2025-10-13 00:06:46,404 | INFO     | mean x: 1760309399.0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,404 | INFO     | mean y: 2533949.511627907
[2025-10-12 20:07:32] 2025-10-13 00:06:46,405 | INFO     | -- intersect: 46804710730.46145
[2025-10-12 20:07:32] 2025-10-13 00:06:46,405 | INFO     | intersect: 46804710730.46145
[2025-10-12 20:07:32] 2025-10-13 00:06:46,405 | INFO     | chi2: 0.11948980750028654
[2025-10-12 20:07:32] 2025-10-13 00:06:46,405 | INFO     | -- intersect: 46804710730.46145
[2025-10-12 20:07:32] 2025-10-13 00:06:46,406 | INFO     | current memory leak: -26.59 B/s (using 129 data points, chi2=0.12)
[2025-10-12 20:07:32] 2025-10-13 00:06:46,406 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-12 20:07:32] 2025-10-13 00:06:46,406 | INFO     | ..............................
[2025-10-12 20:07:32] 2025-10-13 00:06:46,406 | INFO     | . Timing measurements:
[2025-10-12 20:07:32] 2025-10-13 00:06:46,407 | INFO     | . get job = 0 s
[2025-10-12 20:07:32] 2025-10-13 00:06:46,407 | INFO     | . initial setup = 2 s
[2025-10-12 20:07:32] 2025-10-13 00:06:46,407 | INFO     | . payload setup = 4 s
[2025-10-12 20:07:32] 2025-10-13 00:06:46,407 | INFO     | . stage-in = 0 s
[2025-10-12 20:07:32] 2025-10-13 00:06:46,407 | INFO     | . payload execution = 9724 s
[2025-10-12 20:07:32] 2025-10-13 00:06:46,407 | INFO     | . stage-out = 0 s
[2025-10-12 20:07:32] 2025-10-13 00:06:46,408 | INFO     | . log creation = 0 s
[2025-10-12 20:07:32] 2025-10-13 00:06:46,408 | INFO     | ..............................
[2025-10-12 20:07:32] 2025-10-13 00:06:46,726 | INFO     | 
[2025-10-12 20:07:32] 2025-10-13 00:06:46,726 | INFO     | job summary report
[2025-10-12 20:07:32] 2025-10-13 00:06:46,727 | INFO     | --------------------------------------------------
[2025-10-12 20:07:32] 2025-10-13 00:06:46,727 | INFO     | PanDA job id: 6840530514
[2025-10-12 20:07:32] 2025-10-13 00:06:46,727 | INFO     | task id: 46676269
[2025-10-12 20:07:32] 2025-10-13 00:06:46,727 | INFO     | errors: (none)
[2025-10-12 20:07:32] 2025-10-13 00:06:46,727 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:07:32] 2025-10-13 00:06:46,727 | INFO     | pilot state: finished 
[2025-10-12 20:07:32] 2025-10-13 00:06:46,727 | INFO     | transexitcode: 0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,728 | INFO     | exeerrorcode: 0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,728 | INFO     | exeerrordiag: 
[2025-10-12 20:07:32] 2025-10-13 00:06:46,728 | INFO     | exitcode: 0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,728 | INFO     | exitmsg: OK
[2025-10-12 20:07:32] 2025-10-13 00:06:46,728 | INFO     | cpuconsumptiontime: 72657 s
[2025-10-12 20:07:32] 2025-10-13 00:06:46,728 | INFO     | nevents: 400
[2025-10-12 20:07:32] 2025-10-13 00:06:46,729 | INFO     | neventsw: 0
[2025-10-12 20:07:32] 2025-10-13 00:06:46,729 | INFO     | pid: 5977
[2025-10-12 20:07:32] 2025-10-13 00:06:46,729 | INFO     | pgrp: 5977
[2025-10-12 20:07:32] 2025-10-13 00:06:46,729 | INFO     | corecount: 8
[2025-10-12 20:07:32] 2025-10-13 00:06:46,729 | INFO     | event service: False
[2025-10-12 20:07:32] 2025-10-13 00:06:46,729 | INFO     | sizes: {0: 2348743, 1: 2348857, 4: 2349147, 11: 2349175, 9732: 2377711, 9733: 2377710, 9734: 2386892, 9735: 2386948, 9741: 2387206}
[2025-10-12 20:07:32] 2025-10-13 00:06:46,730 | INFO     | --------------------------------------------------
[2025-10-12 20:07:32] 2025-10-13 00:06:46,730 | INFO     | 
[2025-10-12 20:07:32] 2025-10-13 00:06:46,730 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 20:07:32] 2025-10-13 00:06:46,762 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,762 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,763 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,763 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,763 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,763 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,763 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,763 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,764 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,764 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,764 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,764 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,764 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,765 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,765 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:07:32] 2025-10-13 00:06:46,765 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,765 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:07:32] 2025-10-13 00:06:46,766 | INFO     | job 6840530514 has completed (purged errors)
[2025-10-12 20:07:32] 2025-10-13 00:06:46,766 | INFO     | overall cleanup function is called
[2025-10-12 20:07:32] 2025-10-13 00:06:47,774 | INFO     | --- collectZombieJob: --- 10, [5977]
[2025-10-12 20:07:32] 2025-10-13 00:06:47,774 | INFO     | zombie collector waiting for pid 5977
[2025-10-12 20:07:32] 2025-10-13 00:06:47,774 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:07:32] 2025-10-13 00:06:47,775 | INFO     | collected zombie processes
[2025-10-12 20:07:32] 2025-10-13 00:06:47,775 | INFO     | will attempt to kill all subprocesses of pid=5977
[2025-10-12 20:07:32] 2025-10-13 00:06:48,058 | INFO     | process IDs to be killed: [5977] (in reverse order)
[2025-10-12 20:07:32] 2025-10-13 00:06:48,147 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:07:32] 2025-10-13 00:06:48,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:07:32] 2025-10-13 00:06:48,159 | INFO     | did not find any defunct processes belonging to 5977
[2025-10-12 20:07:32] 2025-10-13 00:06:48,169 | INFO     | did not find any defunct processes belonging to 5977
[2025-10-12 20:07:32] 2025-10-13 00:06:48,169 | INFO     | ready for new job
[2025-10-12 20:07:32] 2025-10-13 00:06:48,170 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:07:32] 2025-10-13 00:06:48,172 | INFO     | ***************************************
[2025-10-12 20:07:32] 2025-10-13 00:06:48,172 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:07:32] 2025-10-13 00:06:48,172 | INFO     | ***************************************
[2025-10-12 20:07:32] 2025-10-13 00:06:48,172 | INFO     | 
[2025-10-12 20:07:32] 2025-10-13 00:06:48,174 | INFO     | architecture information:
[2025-10-12 20:07:32] 2025-10-13 00:06:48,174 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:07:32] 2025-10-13 00:06:48,188 | INFO     | cat /etc/os-release:
[2025-10-12 20:07:32] NAME="CentOS Linux"
[2025-10-12 20:07:32] VERSION="7 (Core)"
[2025-10-12 20:07:32] ID="centos"
[2025-10-12 20:07:32] ID_LIKE="rhel fedora"
[2025-10-12 20:07:32] VERSION_ID="7"
[2025-10-12 20:07:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:07:32] ANSI_COLOR="0;31"
[2025-10-12 20:07:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:07:32] HOME_URL="https://www.centos.org/"
[2025-10-12 20:07:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:07:32] 
[2025-10-12 20:07:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:07:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:07:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:07:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:07:32] 
[2025-10-12 20:07:32] 2025-10-13 00:06:48,189 | INFO     | ***************************************
[2025-10-12 20:07:32] 2025-10-13 00:06:48,692 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 20:07:32] 2025-10-13 00:06:48,734 | INFO     | sufficient remaining disk space (104907931648 B)
[2025-10-12 20:07:32] 2025-10-13 00:06:48,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:07:32] 2025-10-13 00:06:48,734 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:07:32] 2025-10-13 00:06:48,734 | INFO     | update_server=False
[2025-10-12 20:07:32] 2025-10-13 00:06:48,735 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:07:32] 2025-10-13 00:06:48,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:07:32] 2025-10-13 00:06:48,735 | INFO     | aborting loop
[2025-10-12 20:07:32] 2025-10-13 00:06:49,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:07:32] 2025-10-13 00:06:49,430 | INFO     | all data control threads have been joined
[2025-10-12 20:07:32] 2025-10-13 00:06:49,740 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:49,741 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:49,884 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:49,999 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:50,085 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:50,187 | INFO     | all payload control threads have been joined
[2025-10-12 20:07:32] 2025-10-13 00:06:50,232 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:50,245 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:50,436 | INFO     | [data] control thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:50,440 | INFO     | all job control threads have been joined
[2025-10-12 20:07:32] 2025-10-13 00:06:50,760 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:50,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:07:32] 2025-10-13 00:06:50,885 | INFO     | [job] validate thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:51,181 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:51,193 | INFO     | [payload] control thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:51,349 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:51,445 | INFO     | [job] control thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:51,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:07:32] 2025-10-13 00:06:52,578 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:06:54,844 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:07:32] 2025-10-13 00:07:19,263 | INFO     | PID=47506 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 20:07:32] 2025-10-13 00:07:19,263 | INFO     | .. there are 4 such processes running
[2025-10-12 20:07:32] 2025-10-13 00:07:19,264 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:07:32] 2025-10-13 00:07:19,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:07:32] 2025-10-13 00:07:19,265 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:07:32] 2025-10-13 00:07:25,504 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:07:32] 2025-10-13 00:07:26,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139712279086912)>', '<ExcThread(monitor, started 139711838406400)>']
[2025-10-12 20:07:32] 2025-10-13 00:07:27,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:07:32] 2025-10-13 00:07:27,306 | INFO     | [monitor] control thread has ended
[2025-10-12 20:07:32] 2025-10-13 00:07:31,764 | INFO     | all workflow threads have been joined
[2025-10-12 20:07:32] 2025-10-13 00:07:31,764 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:07:32] 2025-10-13 00:07:31,765 | INFO     | traces error code: 0
[2025-10-12 20:07:32] 2025-10-13 00:07:31,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:07:32] 2025-10-13 00:07:31,902 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:07:32] 2025-10-13 00:07:31,905 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:07:32] 2025-10-13 00:07:31,909 [wrapper] pilotpid: 47506
[2025-10-12 20:07:32] 2025-10-13 00:07:31,912 [wrapper] Pilot exit status: 0
[2025-10-12 20:07:32] 2025-10-13 00:07:31,929 [wrapper] pandaids: 6840530514
[2025-10-12 20:07:32] 2025-10-13 00:07:32,020 [wrapper] cleanup supervisor_pilot 18621 47507
[2025-10-12 20:07:32] 2025-10-13 00:07:32,022 [wrapper] Test setup, not cleaning
[2025-10-12 20:07:32] 2025-10-13 00:07:32,025 [wrapper] apfmon messages muted
[2025-10-12 20:07:32] 2025-10-13 00:07:32,028 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:07:32] 2025-10-13 00:07:32,030 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:07:32]  *** Error codes and diagnostics ***
[2025-10-12 20:07:32]     "exeErrorCode": 0,
[2025-10-12 20:07:32]     "exeErrorDiag": "",
[2025-10-12 20:07:32]     "pilotErrorCode": 0,
[2025-10-12 20:07:32]     "pilotErrorDiag": "",
[2025-10-12 20:07:32]  *** Listing of results directory ***
[2025-10-12 20:07:32] total 411276
[2025-10-12 20:07:32] -rwx------ 1 boincer umatlas     36292 Oct 12 13:57 runpilot2-wrapper.sh
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:57 queuedata.json
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas       100 Oct 12 17:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:07:32] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 17:23 run_atlas
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas       105 Oct 12 17:23 job.xml
[2025-10-12 20:07:32] -rw-r--r-- 2 boincer umatlas 222993345 Oct 12 17:23 EVNT.46676267._004210.pool.root.1
[2025-10-12 20:07:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:23 start_atlas.sh
[2025-10-12 20:07:32] drwxrwx--x 2 boincer umatlas      4096 Oct 12 17:23 shared
[2025-10-12 20:07:32] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 17:23 input.tar.gz
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas         0 Oct 12 17:23 boinc_lockfile
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 17:23 pandaJob.out
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas    975528 Oct 12 17:24 agis_schedconf.cvmfs.json
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas   1560580 Oct 12 17:24 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:07:32] drwx------ 5 boincer umatlas      4096 Oct 12 17:24 pilot3
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas      6035 Oct 12 20:01 init_data.xml
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas 190725531 Oct 12 20:06 HITS.46676269._085439.pool.root.1
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas       529 Oct 12 20:06 boinc_task_state.xml
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas      1060 Oct 12 20:06 memory_monitor_summary.json
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas    408163 Oct 12 20:06 log.46676269._085439.job.log.tgz.1
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas      7838 Oct 12 20:06 heartbeat.json
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas        95 Oct 12 20:07 pilot_heartbeat.json
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 20:07 boinc_mmap_file
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas        27 Oct 12 20:07 wrapper_checkpoint.txt
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas      4822 Oct 12 20:07 pilotlog.txt
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas   1357881 Oct 12 20:07 log.46676269._085439.job.log.1
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas       357 Oct 12 20:07 output.list
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas       620 Oct 12 20:07 runtime_log
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas   1781760 Oct 12 20:07 result.tar.gz
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas      8693 Oct 12 20:07 runtime_log.err
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas       657 Oct 12 20:07 Co4NDmEVFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3bUMDmS4f2Sn.diag
[2025-10-12 20:07:32] -rw-r--r-- 1 boincer umatlas     20852 Oct 12 20:07 stderr.txt
[2025-10-12 20:07:32] HITS file was successfully produced:
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas 190725531 Oct 12 20:06 shared/HITS.pool.root.1
[2025-10-12 20:07:32]  *** Contents of shared directory: ***
[2025-10-12 20:07:32] total 406344
[2025-10-12 20:07:32] -rw-r--r-- 2 boincer umatlas 222993345 Oct 12 17:23 ATLAS.root_0
[2025-10-12 20:07:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:23 start_atlas.sh
[2025-10-12 20:07:32] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 17:23 input.tar.gz
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas 190725531 Oct 12 20:06 HITS.pool.root.1
[2025-10-12 20:07:32] -rw------- 1 boincer umatlas   1781760 Oct 12 20:07 result.tar.gz
20:07:33 (43598): run_atlas exited; CPU time 72957.874853
20:07:33 (43598): called boinc_finish(0)

</stderr_txt>
]]>

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