Name CodKDmPXFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnxkNDmZmNxjm_1
Workunit 235957600
Created 12 Oct 2025, 19:54:33 UTC
Sent 12 Oct 2025, 21:23:35 UTC
Report deadline 20 Oct 2025, 21:23:35 UTC
Received 14 Oct 2025, 7:13:38 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10916094
Run time 50 min 22 sec
CPU time 8 hours 53 min 31 sec
Validate state Valid
Credit 373.78
Device peak FLOPS 12.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.82 GB
Peak swap size 3.19 GB
Peak disk usage 610.17 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
03:06:00 (805120): wrapper (7.7.26015): starting
03:06:00 (805120): wrapper: running run_atlas (--nthreads 12)
[2025-10-14 03:06:00] Arguments: --nthreads 12
[2025-10-14 03:06:00] Threads: 12
[2025-10-14 03:06:00] Checking for CVMFS
[2025-10-14 03:06:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 03:06:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 03:06:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 03:06:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 03:06:00] 2.13.2.0 3082 1237 49352 151686 2 188 2292558 4194304 0 130560 16 1631861 99.993 43986 164 http://sampacs01.if.usp.br:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-14 03:06:00] CVMFS is ok
[2025-10-14 03:06:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 03:06:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 03:06:00] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-14 03:06:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-14 03:06:00] Further information can be found at the LHC@home message board.
[2025-10-14 03:06:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 03:06:00] Checking for apptainer binary...
[2025-10-14 03:06:00] apptainer is not installed, using version from CVMFS
[2025-10-14 03:06:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 03:06:00] apptainer isnt working: ERROR  : Could not write info to setgroups: Permission denied
[2025-10-14 03:06:00] ERROR  : Error while waiting event for user namespace mappings: no event received
[2025-10-14 03:06:00] 
[2025-10-14 03:06:00] Falling back to singularity found in PATH at /usr/bin/singularity
[2025-10-14 03:06:00] WARNING: singularity support will be removed in a future version of native ATLAS
[2025-10-14 03:06:00] Please install apptainer instead following the instructions at https://apptainer.org/docs/admin/main/installation.html
[2025-10-14 03:06:00] Checking singularity works with /usr/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 03:06:00] singularity works
[2025-10-14 03:06:00] Set ATHENA_PROC_NUMBER=12
[2025-10-14 03:06:00] Set ATHENA_CORE_NUMBER=12
[2025-10-14 03:06:00] Starting ATLAS job with PandaID=6840530588
[2025-10-14 03:06:00] Running command: /usr/bin/singularity exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 03:56:18]  *** The last 200 lines of the pilot log: ***
[2025-10-14 03:56:18] 2025-10-14 06:55:04,596 | INFO     | time since job start (2937s) is within the limit (172800.0s)
[2025-10-14 03:56:18] 2025-10-14 06:55:05,255 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 03:56:18] 2025-10-14 06:55:05,536 | WARNING  | process 815446 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 03:56:18] 2025-10-14 06:55:05,536 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6840530588/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 03:56:18] 2025-10-14 06:55:05,536 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6840530588/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 03:56:18] 2025-10-14 06:55:05,536 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-14 03:56:18] 2025-10-14 06:55:05,536 | WARNING  | maxPSS not found in memory monitor output
[2025-10-14 03:56:18] 2025-10-14 06:55:05,537 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4398966 B
[2025-10-14 03:56:18] 2025-10-14 06:55:05,537 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15649 B
[2025-10-14 03:56:18] 2025-10-14 06:55:05,537 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-14 03:56:18] 2025-10-14 06:55:05,544 | INFO     | sufficient remaining disk space (800307806208 B)
[2025-10-14 03:56:18] 2025-10-14 06:55:05,544 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-14 03:56:18] 2025-10-14 06:55:05,544 | INFO     | size of work directory /var/lib/boinc-client/slots/0/PanDA_Pilot-6840530588: 4684649 B (within 2537553920 B limit)
[2025-10-14 03:56:18] 2025-10-14 06:55:05,544 | INFO     | pfn file=/var/lib/boinc-client/slots/0/PanDA_Pilot-6840530588/HITS.46676269._085513.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-14 03:56:18] 2025-10-14 06:55:05,544 | INFO     | total size of present files: 0 B (workdir size: 4684649 B)
[2025-10-14 03:56:18] 2025-10-14 06:55:05,544 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/0/PanDA_Pilot-6840530588/HITS.46676269._085513.pool.root.1 since it does not exist
[2025-10-14 03:56:18] 2025-10-14 06:55:05,591 | INFO     | number of running child processes to parent process 815446: 1
[2025-10-14 03:56:18] 2025-10-14 06:55:05,591 | INFO     | maximum number of monitored processes: 6
[2025-10-14 03:56:18] 2025-10-14 06:55:05,745 | INFO     | job 6840530588 has state=finished
[2025-10-14 03:56:18] 2025-10-14 06:55:05,745 | INFO     | preparing for final server update for job 6840530588 in state='finished'
[2025-10-14 03:56:18] 2025-10-14 06:55:05,745 | INFO     | this job has now completed (state=finished)
[2025-10-14 03:56:18] 2025-10-14 06:55:05,745 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 03:56:18] 2025-10-14 06:55:05,745 | INFO     | log transfer has been attempted: DONE
[2025-10-14 03:56:18] 2025-10-14 06:55:05,745 | INFO     | job 6840530588 has finished - writing final server update
[2025-10-14 03:56:18] 2025-10-14 06:55:05,745 | INFO     | total number of processed events: 400 (read)
[2025-10-14 03:56:18] 2025-10-14 06:55:05,746 | INFO     | executing command: lscpu
[2025-10-14 03:56:18] 2025-10-14 06:55:05,756 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 03:56:18] 2025-10-14 06:55:06,601 | INFO     | time since job start (2939s) is within the limit (172800.0s)
[2025-10-14 03:56:18] 2025-10-14 06:55:08,093 | INFO     | monitor loop #225: job 0:6840530588 is in state 'finished'
[2025-10-14 03:56:18] 2025-10-14 06:55:08,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 03:56:18] 2025-10-14 06:55:08,607 | INFO     | time since job start (2941s) is within the limit (172800.0s)
[2025-10-14 03:56:18] 2025-10-14 06:55:10,594 | INFO     | monitor loop #226: job 0:6840530588 is in state 'finished'
[2025-10-14 03:56:18] 2025-10-14 06:55:10,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 03:56:18] 2025-10-14 06:55:10,610 | INFO     | time since job start (2943s) is within the limit (172800.0s)
[2025-10-14 03:56:18] 2025-10-14 06:55:11,031 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 03:56:18] 2025-10-14 06:55:11,033 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4483.5519375
[2025-10-14 03:56:18] 2025-10-14 06:55:11,035 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6840530588/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 03:56:18] 2025-10-14 06:55:11,035 | INFO     | extracted standard info from prmon json
[2025-10-14 03:56:18] 2025-10-14 06:55:11,035 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 03:56:18] 2025-10-14 06:55:11,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 03:56:18] 2025-10-14 06:55:11,035 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 03:56:18] 2025-10-14 06:55:11,035 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 03:56:18] 2025-10-14 06:55:11,036 | INFO     | fitting pss+swap vs Time
[2025-10-14 03:56:18] 2025-10-14 06:55:11,036 | INFO     | sum of square deviations: 21358540.0
[2025-10-14 03:56:18] 2025-10-14 06:55:11,036 | INFO     | sum of deviations: -2108633543.0000002
[2025-10-14 03:56:18] 2025-10-14 06:55:11,036 | INFO     | mean x: 1760423509.0
[2025-10-14 03:56:18] 2025-10-14 06:55:11,036 | INFO     | mean y: 2766602.6585365855
[2025-10-14 03:56:18] 2025-10-14 06:55:11,036 | INFO     | -- intersect: 173801540346.70486
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | intersect: 173801540346.70486
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | chi2: 0.06681588368057409
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | -- intersect: 173801540346.70486
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | current memory leak: -98.73 B/s (using 41 data points, chi2=0.07)
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | could have reported an average CPU frequency of 4261 MHz (5 samples)
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | ..............................
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | . Timing measurements:
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | . get job = 0 s
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | . initial setup = 4 s
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | . payload setup = 1 s
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | . stage-in = 0 s
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | . payload execution = 2917 s
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | . stage-out = 0 s
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | . log creation = 0 s
[2025-10-14 03:56:18] 2025-10-14 06:55:11,037 | INFO     | ..............................
[2025-10-14 03:56:18] 2025-10-14 06:55:11,085 | INFO     | 
[2025-10-14 03:56:18] 2025-10-14 06:55:11,085 | INFO     | job summary report
[2025-10-14 03:56:18] 2025-10-14 06:55:11,085 | INFO     | --------------------------------------------------
[2025-10-14 03:56:18] 2025-10-14 06:55:11,085 | INFO     | PanDA job id: 6840530588
[2025-10-14 03:56:18] 2025-10-14 06:55:11,085 | INFO     | task id: 46676269
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | errors: (none)
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | pilot state: finished 
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | transexitcode: 0
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | exeerrorcode: 0
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | exeerrordiag: 
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | exitcode: 0
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | exitmsg: OK
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | cpuconsumptiontime: 31982 s
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | nevents: 400
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | neventsw: 0
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | pid: 815446
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | pgrp: 815446
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | corecount: 12
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | event service: False
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | sizes: {0: 2347978, 1: 2348841, 2: 2349103, 11: 2349131, 2923: 2374521, 2924: 2383533, 2925: 2383717, 2931: 2383971}
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | --------------------------------------------------
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | 
[2025-10-14 03:56:18] 2025-10-14 06:55:11,086 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-14 03:56:18] 2025-10-14 06:55:11,097 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | job 6840530588 has completed (purged errors)
[2025-10-14 03:56:18] 2025-10-14 06:55:11,098 | INFO     | overall cleanup function is called
[2025-10-14 03:56:18] 2025-10-14 06:55:12,101 | INFO     | --- collectZombieJob: --- 10, [815446]
[2025-10-14 03:56:18] 2025-10-14 06:55:12,101 | INFO     | zombie collector waiting for pid 815446
[2025-10-14 03:56:18] 2025-10-14 06:55:12,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 03:56:18] 2025-10-14 06:55:12,101 | INFO     | collected zombie processes
[2025-10-14 03:56:18] 2025-10-14 06:55:12,101 | INFO     | will attempt to kill all subprocesses of pid=815446
[2025-10-14 03:56:18] 2025-10-14 06:55:12,150 | INFO     | process IDs to be killed: [815446] (in reverse order)
[2025-10-14 03:56:18] 2025-10-14 06:55:12,172 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 03:56:18] 2025-10-14 06:55:12,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 03:56:18] 2025-10-14 06:55:12,173 | INFO     | did not find any defunct processes belonging to 815446
[2025-10-14 03:56:18] 2025-10-14 06:55:12,174 | INFO     | did not find any defunct processes belonging to 815446
[2025-10-14 03:56:18] 2025-10-14 06:55:12,174 | INFO     | ready for new job
[2025-10-14 03:56:18] 2025-10-14 06:55:12,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 03:56:18] 2025-10-14 06:55:12,175 | INFO     | ***************************************
[2025-10-14 03:56:18] 2025-10-14 06:55:12,175 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 03:56:18] 2025-10-14 06:55:12,175 | INFO     | ***************************************
[2025-10-14 03:56:18] 2025-10-14 06:55:12,175 | INFO     | 
[2025-10-14 03:56:18] 2025-10-14 06:55:12,175 | INFO     | architecture information:
[2025-10-14 03:56:18] 2025-10-14 06:55:12,176 | INFO     | executing command: cat /etc/os-release
[2025-10-14 03:56:18] 2025-10-14 06:55:12,181 | INFO     | cat /etc/os-release:
[2025-10-14 03:56:18] NAME="CentOS Linux"
[2025-10-14 03:56:18] VERSION="7 (Core)"
[2025-10-14 03:56:18] ID="centos"
[2025-10-14 03:56:18] ID_LIKE="rhel fedora"
[2025-10-14 03:56:18] VERSION_ID="7"
[2025-10-14 03:56:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 03:56:18] ANSI_COLOR="0;31"
[2025-10-14 03:56:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 03:56:18] HOME_URL="https://www.centos.org/"
[2025-10-14 03:56:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 03:56:18] 
[2025-10-14 03:56:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 03:56:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 03:56:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 03:56:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 03:56:18] 
[2025-10-14 03:56:18] 2025-10-14 06:55:12,181 | INFO     | ***************************************
[2025-10-14 03:56:18] 2025-10-14 06:55:12,683 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-14 03:56:18] 2025-10-14 06:55:12,691 | INFO     | sufficient remaining disk space (800313049088 B)
[2025-10-14 03:56:18] 2025-10-14 06:55:12,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 03:56:18] 2025-10-14 06:55:12,691 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 03:56:18] 2025-10-14 06:55:12,691 | INFO     | update_server=False
[2025-10-14 03:56:18] 2025-10-14 06:55:12,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 03:56:18] 2025-10-14 06:55:12,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 03:56:18] 2025-10-14 06:55:12,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 03:56:18] 2025-10-14 06:55:12,812 | INFO     | all job control threads have been joined
[2025-10-14 03:56:18] 2025-10-14 06:55:13,097 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 03:56:18] 2025-10-14 06:55:13,097 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 03:56:18] 2025-10-14 06:55:13,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 03:56:18] 2025-10-14 06:55:13,097 | INFO     | will abort loop
[2025-10-14 03:56:18] 2025-10-14 06:55:13,613 | INFO     | all data control threads have been joined
[2025-10-14 03:56:18] 2025-10-14 06:55:13,695 | INFO     | [job] retrieve thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:13,696 | INFO     | [job] queue monitor thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:13,711 | INFO     | all payload control threads have been joined
[2025-10-14 03:56:18] 2025-10-14 06:55:13,816 | INFO     | [job] control thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:14,102 | INFO     | [job] job monitor thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:14,347 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:14,458 | INFO     | [job] validate thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:14,609 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:14,618 | INFO     | [data] control thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:14,627 | INFO     | [data] copytool_in thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:14,665 | INFO     | [payload] failed_post thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:14,696 | INFO     | [data] copytool_out thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:14,716 | INFO     | [payload] control thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:14,742 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:15,173 | INFO     | [payload] validate_post thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:15,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 03:56:18] 2025-10-14 06:55:19,797 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:23,381 | INFO     | job.realtimelogging is not enabled
[2025-10-14 03:56:18] 2025-10-14 06:55:24,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 03:56:18] 2025-10-14 06:55:43,738 | INFO     | PID=808915 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 03:56:18] 2025-10-14 06:55:43,739 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 03:56:18] 2025-10-14 06:55:43,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 03:56:18] 2025-10-14 06:55:43,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 03:56:18] 2025-10-14 06:56:11,948 | INFO     | [monitor] cgroup control has ended
[2025-10-14 03:56:18] 2025-10-14 06:56:13,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132345793042240)>', '<ExcThread(monitor, started 132345290012416)>']
[2025-10-14 03:56:18] 2025-10-14 06:56:13,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 03:56:18] 2025-10-14 06:56:13,878 | INFO     | [monitor] control thread has ended
[2025-10-14 03:56:18] 2025-10-14 06:56:18,346 | INFO     | all workflow threads have been joined
[2025-10-14 03:56:18] 2025-10-14 06:56:18,346 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 03:56:18] 2025-10-14 06:56:18,347 | INFO     | traces error code: 0
[2025-10-14 03:56:18] 2025-10-14 06:56:18,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 03:56:18] 2025-10-14 06:56:18,388 [wrapper] ==== pilot stdout END ====
[2025-10-14 03:56:18] 2025-10-14 06:56:18,390 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 03:56:18] 2025-10-14 06:56:18,391 [wrapper] pilotpid: 808915
[2025-10-14 03:56:18] 2025-10-14 06:56:18,391 [wrapper] Pilot exit status: 0
[2025-10-14 03:56:18] 2025-10-14 06:56:18,395 [wrapper] pandaids: 6840530588
[2025-10-14 03:56:18] 2025-10-14 06:56:18,406 [wrapper] cleanup supervisor_pilot  834188 808916
[2025-10-14 03:56:18] 2025-10-14 06:56:18,407 [wrapper] Test setup, not cleaning
[2025-10-14 03:56:18] 2025-10-14 06:56:18,408 [wrapper] apfmon messages muted
[2025-10-14 03:56:18] 2025-10-14 06:56:18,409 [wrapper] ==== wrapper stdout END ====
[2025-10-14 03:56:18] 2025-10-14 06:56:18,410 [wrapper] ==== wrapper stderr END ====
[2025-10-14 03:56:18]  *** Error codes and diagnostics ***
[2025-10-14 03:56:18]     "exeErrorCode": 0,
[2025-10-14 03:56:18]     "exeErrorDiag": "",
[2025-10-14 03:56:18]     "pilotErrorCode": 0,
[2025-10-14 03:56:18]     "pilotErrorDiag": "",
[2025-10-14 03:56:18]  *** Listing of results directory ***
[2025-10-14 03:56:18] total 416888
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:57 pilot3.tar.gz
[2025-10-14 03:56:18] -rwx------ 1 boinc boinc     36292 Oct 12 14:59 runpilot2-wrapper.sh
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:59 queuedata.json
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc       100 Oct 14 03:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 03:56:18] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 03:05 run_atlas
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc       105 Oct 14 03:05 job.xml
[2025-10-14 03:56:18] -rw-r--r-- 2 boinc boinc 221461869 Oct 14 03:06 EVNT.46676267._004380.pool.root.1
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc      9549 Oct 14 03:06 init_data.xml
[2025-10-14 03:56:18] drwxrwx--x 2 boinc boinc      4096 Oct 14 03:06 shared
[2025-10-14 03:56:18] -rw-r--r-- 2 boinc boinc    569682 Oct 14 03:06 input.tar.gz
[2025-10-14 03:56:18] -rw-r--r-- 2 boinc boinc     15120 Oct 14 03:06 start_atlas.sh
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc         0 Oct 14 03:06 boinc_lockfile
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc      2549 Oct 14 03:06 pandaJob.out
[2025-10-14 03:56:18] -rw------- 1 boinc boinc    972807 Oct 14 03:06 agis_schedconf.cvmfs.json
[2025-10-14 03:56:18] -rw------- 1 boinc boinc   1560580 Oct 14 03:06 agis_ddmendpoints.agis.ALL.json
[2025-10-14 03:56:18] drwx------ 5 boinc boinc      4096 Oct 14 03:06 pilot3
[2025-10-14 03:56:18] -rw------- 1 boinc boinc 199881441 Oct 14 03:54 HITS.46676269._085513.pool.root.1
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc       529 Oct 14 03:54 boinc_task_state.xml
[2025-10-14 03:56:18] -rw------- 1 boinc boinc      1018 Oct 14 03:54 memory_monitor_summary.json
[2025-10-14 03:56:18] -rw------- 1 boinc boinc    366461 Oct 14 03:55 log.46676269._085513.job.log.tgz.1
[2025-10-14 03:56:18] -rw------- 1 boinc boinc      7769 Oct 14 03:55 heartbeat.json
[2025-10-14 03:56:18] -rw------- 1 boinc boinc        95 Oct 14 03:55 pilot_heartbeat.json
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc        27 Oct 14 03:55 wrapper_checkpoint.txt
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc      8192 Oct 14 03:55 boinc_mmap_file
[2025-10-14 03:56:18] -rw------- 1 boinc boinc      5013 Oct 14 03:56 pilotlog.txt
[2025-10-14 03:56:18] -rw------- 1 boinc boinc    454907 Oct 14 03:56 log.46676269._085513.job.log.1
[2025-10-14 03:56:18] -rw------- 1 boinc boinc       357 Oct 14 03:56 output.list
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc       620 Oct 14 03:56 runtime_log
[2025-10-14 03:56:18] -rw------- 1 boinc boinc    839680 Oct 14 03:56 result.tar.gz
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc      8802 Oct 14 03:56 runtime_log.err
[2025-10-14 03:56:18] -rw------- 1 boinc boinc       657 Oct 14 03:56 CodKDmPXFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnxkNDmZmNxjm.diag
[2025-10-14 03:56:18] -rw-r--r-- 1 boinc boinc     23329 Oct 14 03:56 stderr.txt
[2025-10-14 03:56:18] HITS file was successfully produced:
[2025-10-14 03:56:18] -rw------- 1 boinc boinc 199881441 Oct 14 03:54 shared/HITS.pool.root.1
[2025-10-14 03:56:18]  *** Contents of shared directory: ***
[2025-10-14 03:56:18] total 412876
[2025-10-14 03:56:18] -rw-r--r-- 2 boinc boinc 221461869 Oct 14 03:06 ATLAS.root_0
[2025-10-14 03:56:18] -rw-r--r-- 2 boinc boinc    569682 Oct 14 03:06 input.tar.gz
[2025-10-14 03:56:18] -rw-r--r-- 2 boinc boinc     15120 Oct 14 03:06 start_atlas.sh
[2025-10-14 03:56:18] -rw------- 1 boinc boinc 199881441 Oct 14 03:54 HITS.pool.root.1
[2025-10-14 03:56:18] -rw------- 1 boinc boinc    839680 Oct 14 03:56 result.tar.gz
03:56:20 (805120): run_atlas exited; CPU time 32004.101332
03:56:20 (805120): called boinc_finish(0)

</stderr_txt>
]]>


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