Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:28:55 (7885): wrapper (7.7.26015): starting
07:28:55 (7885): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 07:28:55] Arguments: --nthreads 12
[2025-10-13 07:28:55] Threads: 12
[2025-10-13 07:28:55] Checking for CVMFS
[2025-10-13 07:28:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:29:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:29:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:29:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:29:17] 2.13.2.0 8095 0 25200 151650 3 1 3320336 4096000 0 130560 0 0 0.000 1292 581 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 07:29:17] CVMFS is ok
[2025-10-13 07:29:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:29:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:29:17] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 07:29:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 07:29:17] Further information can be found at the LHC@home message board.
[2025-10-13 07:29:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:29:17] Checking for apptainer binary...
[2025-10-13 07:29:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:29:17] Running /usr/bin/apptainer --version
[2025-10-13 07:29:17] apptainer version 1.4.3
[2025-10-13 07:29:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:29:18] pc2
[2025-10-13 07:29:18] apptainer works
[2025-10-13 07:29:18] Set ATHENA_PROC_NUMBER=12
[2025-10-13 07:29:18] Set ATHENA_CORE_NUMBER=12
[2025-10-13 07:29:18] Starting ATLAS job with PandaID=6840390931
[2025-10-13 07:29:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:14:53]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:14:53]  protocol_id=None
[2025-10-13 08:14:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 08:14:53]  replicas=None
[2025-10-13 08:14:53]  scope=mc23_13p6TeV
[2025-10-13 08:14:53]  status=None
[2025-10-13 08:14:53]  status_code=0
[2025-10-13 08:14:53]  storage_token=
[2025-10-13 08:14:53]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6840390931/log.46676269._083703.job.log.tgz.1
[2025-10-13 08:14:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/03/log.46676269._083703.job.log.tgz.1
[2025-10-13 08:14:53]  workdir=None
[2025-10-13 08:14:53] ]
[2025-10-13 08:14:53] 2025-10-13 06:14:15,529 | INFO     | transferring file log.46676269._083703.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6840390931/log.46676269._083703.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 08:14:53] 2025-10-13 06:14:15,529 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6840390931/log.46676269._083703.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._083703.job
[2025-10-13 08:14:53] 2025-10-13 06:14:15,537 | INFO     | adding to output.list: log.46676269._083703.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/03/log.46676269._083703.job.log.tg
[2025-10-13 08:14:53] 2025-10-13 06:14:15,538 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 08:14:53] 2025-10-13 06:14:15,538 | INFO     | summary of transferred files:
[2025-10-13 08:14:53] 2025-10-13 06:14:15,538 | INFO     |  -- lfn=log.46676269._083703.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 08:14:53] 2025-10-13 06:14:15,538 | INFO     | stage-out finished correctly
[2025-10-13 08:14:53] 2025-10-13 06:14:15,909 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 08:14:53] 2025-10-13 06:14:16,351 | INFO     | time since job start (2677s) is within the limit (172800.0s)
[2025-10-13 08:14:53] 2025-10-13 06:14:17,073 | INFO     | job 6840390931 has state=finished
[2025-10-13 08:14:53] 2025-10-13 06:14:17,074 | INFO     | preparing for final server update for job 6840390931 in state='finished'
[2025-10-13 08:14:53] 2025-10-13 06:14:17,075 | INFO     | this job has now completed (state=finished)
[2025-10-13 08:14:53] 2025-10-13 06:14:17,075 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 08:14:53] 2025-10-13 06:14:17,075 | INFO     | log transfer has been attempted: DONE
[2025-10-13 08:14:53] 2025-10-13 06:14:17,075 | INFO     | job 6840390931 has finished - writing final server update
[2025-10-13 08:14:53] 2025-10-13 06:14:17,076 | INFO     | total number of processed events: 400 (read)
[2025-10-13 08:14:53] 2025-10-13 06:14:17,077 | INFO     | executing command: lscpu
[2025-10-13 08:14:53] 2025-10-13 06:14:17,097 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 08:14:53] 2025-10-13 06:14:17,462 | INFO     | monitor loop #207: job 0:6840390931 is in state 'finished'
[2025-10-13 08:14:53] 2025-10-13 06:14:17,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:14:53] 2025-10-13 06:14:18,356 | INFO     | time since job start (2679s) is within the limit (172800.0s)
[2025-10-13 08:14:53] 2025-10-13 06:14:19,965 | INFO     | monitor loop #208: job 0:6840390931 is in state 'finished'
[2025-10-13 08:14:53] 2025-10-13 06:14:19,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:14:53] 2025-10-13 06:14:20,362 | INFO     | time since job start (2681s) is within the limit (172800.0s)
[2025-10-13 08:14:53] 2025-10-13 06:14:20,904 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 08:14:53] 2025-10-13 06:14:20,905 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3026.965083333333
[2025-10-13 08:14:53] 2025-10-13 06:14:20,906 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6840390931/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:14:53] 2025-10-13 06:14:20,906 | INFO     | extracted standard info from prmon json
[2025-10-13 08:14:53] 2025-10-13 06:14:20,906 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:14:53] 2025-10-13 06:14:20,906 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:14:53] 2025-10-13 06:14:20,906 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:14:53] 2025-10-13 06:14:20,906 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:14:53] 2025-10-13 06:14:20,907 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:14:53] 2025-10-13 06:14:20,907 | INFO     | sum of square deviations: 15695178.0
[2025-10-13 08:14:53] 2025-10-13 06:14:20,907 | INFO     | sum of deviations: 341341176.99999994
[2025-10-13 08:14:53] 2025-10-13 06:14:20,907 | INFO     | mean x: 1760334803.0
[2025-10-13 08:14:53] 2025-10-13 06:14:20,907 | INFO     | mean y: 3130639.918918919
[2025-10-13 08:14:53] 2025-10-13 06:14:20,907 | INFO     | -- intersect: -38280904977.26764
[2025-10-13 08:14:53] 2025-10-13 06:14:20,907 | INFO     | intersect: -38280904977.26764
[2025-10-13 08:14:53] 2025-10-13 06:14:20,907 | INFO     | chi2: 0.0001786451151544346
[2025-10-13 08:14:53] 2025-10-13 06:14:20,907 | INFO     | -- intersect: -38280904977.26764
[2025-10-13 08:14:53] 2025-10-13 06:14:20,907 | INFO     | current memory leak: 21.75 B/s (using 37 data points, chi2=0.00)
[2025-10-13 08:14:53] 2025-10-13 06:14:20,907 | INFO     | could have reported an average CPU frequency of 3405 MHz (5 samples)
[2025-10-13 08:14:53] 2025-10-13 06:14:20,908 | INFO     | ..............................
[2025-10-13 08:14:53] 2025-10-13 06:14:20,908 | INFO     | . Timing measurements:
[2025-10-13 08:14:53] 2025-10-13 06:14:20,908 | INFO     | . get job = 0 s
[2025-10-13 08:14:53] 2025-10-13 06:14:20,908 | INFO     | . initial setup = 2 s
[2025-10-13 08:14:53] 2025-10-13 06:14:20,908 | INFO     | . payload setup = 4 s
[2025-10-13 08:14:53] 2025-10-13 06:14:20,908 | INFO     | . stage-in = 0 s
[2025-10-13 08:14:53] 2025-10-13 06:14:20,908 | INFO     | . payload execution = 2654 s
[2025-10-13 08:14:53] 2025-10-13 06:14:20,908 | INFO     | . stage-out = 0 s
[2025-10-13 08:14:53] 2025-10-13 06:14:20,908 | INFO     | . log creation = 0 s
[2025-10-13 08:14:53] 2025-10-13 06:14:20,908 | INFO     | ..............................
[2025-10-13 08:14:53] 2025-10-13 06:14:20,985 | INFO     | 
[2025-10-13 08:14:53] 2025-10-13 06:14:20,985 | INFO     | job summary report
[2025-10-13 08:14:53] 2025-10-13 06:14:20,986 | INFO     | --------------------------------------------------
[2025-10-13 08:14:53] 2025-10-13 06:14:20,986 | INFO     | PanDA job id: 6840390931
[2025-10-13 08:14:53] 2025-10-13 06:14:20,986 | INFO     | task id: 46676269
[2025-10-13 08:14:53] 2025-10-13 06:14:20,986 | INFO     | errors: (none)
[2025-10-13 08:14:53] 2025-10-13 06:14:20,986 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:14:53] 2025-10-13 06:14:20,986 | INFO     | pilot state: finished 
[2025-10-13 08:14:53] 2025-10-13 06:14:20,986 | INFO     | transexitcode: 0
[2025-10-13 08:14:53] 2025-10-13 06:14:20,987 | INFO     | exeerrorcode: 0
[2025-10-13 08:14:53] 2025-10-13 06:14:20,987 | INFO     | exeerrordiag: 
[2025-10-13 08:14:53] 2025-10-13 06:14:20,987 | INFO     | exitcode: 0
[2025-10-13 08:14:53] 2025-10-13 06:14:20,987 | INFO     | exitmsg: OK
[2025-10-13 08:14:53] 2025-10-13 06:14:20,987 | INFO     | cpuconsumptiontime: 26324 s
[2025-10-13 08:14:53] 2025-10-13 06:14:20,987 | INFO     | nevents: 400
[2025-10-13 08:14:53] 2025-10-13 06:14:20,987 | INFO     | neventsw: 0
[2025-10-13 08:14:53] 2025-10-13 06:14:20,987 | INFO     | pid: 19261
[2025-10-13 08:14:53] 2025-10-13 06:14:20,988 | INFO     | pgrp: 19261
[2025-10-13 08:14:53] 2025-10-13 06:14:20,988 | INFO     | corecount: 12
[2025-10-13 08:14:53] 2025-10-13 06:14:20,988 | INFO     | event service: False
[2025-10-13 08:14:53] 2025-10-13 06:14:20,988 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 2661: 2374447, 2662: 2383445, 2663: 2383501, 2668: 2383855}
[2025-10-13 08:14:53] 2025-10-13 06:14:20,988 | INFO     | --------------------------------------------------
[2025-10-13 08:14:53] 2025-10-13 06:14:20,988 | INFO     | 
[2025-10-13 08:14:53] 2025-10-13 06:14:20,988 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-13 08:14:53] 2025-10-13 06:14:21,010 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | job 6840390931 has completed (purged errors)
[2025-10-13 08:14:53] 2025-10-13 06:14:21,011 | INFO     | overall cleanup function is called
[2025-10-13 08:14:53] 2025-10-13 06:14:22,017 | INFO     | --- collectZombieJob: --- 10, [19261]
[2025-10-13 08:14:53] 2025-10-13 06:14:22,017 | INFO     | zombie collector waiting for pid 19261
[2025-10-13 08:14:53] 2025-10-13 06:14:22,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:14:53] 2025-10-13 06:14:22,018 | INFO     | collected zombie processes
[2025-10-13 08:14:53] 2025-10-13 06:14:22,018 | INFO     | will attempt to kill all subprocesses of pid=19261
[2025-10-13 08:14:53] 2025-10-13 06:14:22,054 | INFO     | process IDs to be killed: [19261] (in reverse order)
[2025-10-13 08:14:53] 2025-10-13 06:14:22,070 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:14:53] 2025-10-13 06:14:22,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:14:53] 2025-10-13 06:14:22,071 | INFO     | did not find any defunct processes belonging to 19261
[2025-10-13 08:14:53] 2025-10-13 06:14:22,072 | INFO     | did not find any defunct processes belonging to 19261
[2025-10-13 08:14:53] 2025-10-13 06:14:22,072 | INFO     | ready for new job
[2025-10-13 08:14:53] 2025-10-13 06:14:22,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:14:53] 2025-10-13 06:14:22,072 | INFO     | ***************************************
[2025-10-13 08:14:53] 2025-10-13 06:14:22,072 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:14:53] 2025-10-13 06:14:22,072 | INFO     | ***************************************
[2025-10-13 08:14:53] 2025-10-13 06:14:22,072 | INFO     | 
[2025-10-13 08:14:53] 2025-10-13 06:14:22,073 | INFO     | architecture information:
[2025-10-13 08:14:53] 2025-10-13 06:14:22,073 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:14:53] 2025-10-13 06:14:22,078 | INFO     | cat /etc/os-release:
[2025-10-13 08:14:53] NAME="CentOS Linux"
[2025-10-13 08:14:53] VERSION="7 (Core)"
[2025-10-13 08:14:53] ID="centos"
[2025-10-13 08:14:53] ID_LIKE="rhel fedora"
[2025-10-13 08:14:53] VERSION_ID="7"
[2025-10-13 08:14:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:14:53] ANSI_COLOR="0;31"
[2025-10-13 08:14:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:14:53] HOME_URL="https://www.centos.org/"
[2025-10-13 08:14:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:14:53] 
[2025-10-13 08:14:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:14:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:14:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:14:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:14:53] 
[2025-10-13 08:14:53] 2025-10-13 06:14:22,078 | INFO     | ***************************************
[2025-10-13 08:14:53] 2025-10-13 06:14:22,580 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-13 08:14:53] 2025-10-13 06:14:22,601 | INFO     | sufficient remaining disk space (26487029760 B)
[2025-10-13 08:14:53] 2025-10-13 06:14:22,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:14:53] 2025-10-13 06:14:22,602 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:14:53] 2025-10-13 06:14:22,602 | INFO     | update_server=False
[2025-10-13 08:14:53] 2025-10-13 06:14:22,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:14:53] 2025-10-13 06:14:22,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:14:53] 2025-10-13 06:14:22,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:14:53] 2025-10-13 06:14:22,627 | INFO     | all job control threads have been joined
[2025-10-13 08:14:53] 2025-10-13 06:14:23,049 | INFO     | all data control threads have been joined
[2025-10-13 08:14:53] 2025-10-13 06:14:23,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:14:53] 2025-10-13 06:14:23,473 | INFO     | aborting loop
[2025-10-13 08:14:53] 2025-10-13 06:14:23,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:14:53] 2025-10-13 06:14:23,607 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:23,608 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:23,632 | INFO     | [job] control thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:23,634 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:23,648 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:23,803 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:23,868 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:24,054 | INFO     | [data] control thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:24,092 | INFO     | all payload control threads have been joined
[2025-10-13 08:14:53] 2025-10-13 06:14:24,355 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:24,478 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:24,994 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:25,046 | INFO     | [job] validate thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:25,097 | INFO     | [payload] control thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:25,584 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:26,608 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:32,941 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:14:53] 2025-10-13 06:14:33,946 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:14:53] 2025-10-13 06:14:35,911 [wrapper] supervise_pilot (15 min periods counter: 4)
[2025-10-13 08:14:53] 2025-10-13 06:14:43,234 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:14:53] 2025-10-13 06:14:44,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138691540637504)>', '<ExcThread(monitor, started 138691037083392)>']
[2025-10-13 08:14:53] 2025-10-13 06:14:49,288 | INFO     | all workflow threads have been joined
[2025-10-13 08:14:53] 2025-10-13 06:14:49,288 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:14:53] 2025-10-13 06:14:49,288 | INFO     | traces error code: 0
[2025-10-13 08:14:53] 2025-10-13 06:14:49,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:14:53] 2025-10-13 06:14:53,493 | INFO     | PID=12826 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 08:14:53] 2025-10-13 06:14:53,494 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:14:53] 2025-10-13 06:14:53,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:14:53] 2025-10-13 06:14:53,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:14:53] 2025-10-13 06:14:53,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:14:53] 2025-10-13 06:14:53,494 | INFO     | [monitor] control thread has ended
[2025-10-13 08:14:53] 2025-10-13 06:14:53,541 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:14:53] 2025-10-13 06:14:53,543 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:14:53] 2025-10-13 06:14:53,544 [wrapper] pilotpid: 12826
[2025-10-13 08:14:53] 2025-10-13 06:14:53,547 [wrapper] Pilot exit status: 0
[2025-10-13 08:14:53] 2025-10-13 06:14:53,556 [wrapper] pandaids: 6840390931
[2025-10-13 08:14:53] 2025-10-13 06:14:53,569 [wrapper] cleanup supervisor_pilot   42105 12827
[2025-10-13 08:14:53] 2025-10-13 06:14:53,570 [wrapper] Test setup, not cleaning
[2025-10-13 08:14:53] 2025-10-13 06:14:53,572 [wrapper] apfmon messages muted
[2025-10-13 08:14:53] 2025-10-13 06:14:53,576 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:14:53] 2025-10-13 06:14:53,577 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:14:53]  *** Error codes and diagnostics ***
[2025-10-13 08:14:53]     "exeErrorCode": 0,
[2025-10-13 08:14:53]     "exeErrorDiag": "",
[2025-10-13 08:14:53]     "pilotErrorCode": 0,
[2025-10-13 08:14:53]     "pilotErrorDiag": "",
[2025-10-13 08:14:53]  *** Listing of results directory ***
[2025-10-13 08:14:53] total 407968
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:01 pilot3.tar.gz
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc      5112 Oct 12 18:34 queuedata.json
[2025-10-13 08:14:53] -rwx------ 1 boinc boinc     36292 Oct 12 18:35 runpilot2-wrapper.sh
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:14:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:28 run_atlas
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:28 job.xml
[2025-10-13 08:14:53] -rw-r--r-- 2 boinc boinc 218691795 Oct 13 07:28 EVNT.46676267._004750.pool.root.1
[2025-10-13 08:14:53] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:28 shared
[2025-10-13 08:14:53] -rw-r--r-- 2 boinc boinc    569682 Oct 13 07:28 input.tar.gz
[2025-10-13 08:14:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:28 start_atlas.sh
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc      6562 Oct 13 07:28 init_data.xml
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:28 boinc_setup_complete
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:28 boinc_lockfile
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc      2550 Oct 13 07:29 pandaJob.out
[2025-10-13 08:14:53] -rw------- 1 boinc boinc    973230 Oct 13 07:29 agis_schedconf.cvmfs.json
[2025-10-13 08:14:53] -rw------- 1 boinc boinc   1560580 Oct 13 07:29 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:14:53] drwx------ 5 boinc boinc      4096 Oct 13 07:29 pilot3
[2025-10-13 08:14:53] -rw------- 1 boinc boinc 193606701 Oct 13 08:13 HITS.46676269._083703.pool.root.1
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc       530 Oct 13 08:13 boinc_task_state.xml
[2025-10-13 08:14:53] -rw------- 1 boinc boinc        95 Oct 13 08:14 pilot_heartbeat.json
[2025-10-13 08:14:53] -rw------- 1 boinc boinc      1025 Oct 13 08:14 memory_monitor_summary.json
[2025-10-13 08:14:53] -rw------- 1 boinc boinc    365065 Oct 13 08:14 log.46676269._083703.job.log.tgz.1
[2025-10-13 08:14:53] -rw------- 1 boinc boinc      7768 Oct 13 08:14 heartbeat.json
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc        27 Oct 13 08:14 wrapper_checkpoint.txt
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:14 boinc_mmap_file
[2025-10-13 08:14:53] -rw------- 1 boinc boinc       745 Oct 13 08:14 pilotlog.txt
[2025-10-13 08:14:53] -rw------- 1 boinc boinc    414030 Oct 13 08:14 log.46676269._083703.job.log.1
[2025-10-13 08:14:53] -rw------- 1 boinc boinc       357 Oct 13 08:14 output.list
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc       620 Oct 13 08:14 runtime_log
[2025-10-13 08:14:53] -rw------- 1 boinc boinc    798720 Oct 13 08:14 result.tar.gz
[2025-10-13 08:14:53] -rw------- 1 boinc boinc       637 Oct 13 08:14 YGCODmUDES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSgkNDmzLhnrn.diag
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc      8636 Oct 13 08:14 runtime_log.err
[2025-10-13 08:14:53] -rw-r--r-- 1 boinc boinc     21876 Oct 13 08:14 stderr.txt
[2025-10-13 08:14:53] HITS file was successfully produced:
[2025-10-13 08:14:53] -rw------- 1 boinc boinc 193606701 Oct 13 08:13 shared/HITS.pool.root.1
[2025-10-13 08:14:53]  *** Contents of shared directory: ***
[2025-10-13 08:14:53] total 404004
[2025-10-13 08:14:53] -rw-r--r-- 2 boinc boinc 218691795 Oct 13 07:28 ATLAS.root_0
[2025-10-13 08:14:53] -rw-r--r-- 2 boinc boinc    569682 Oct 13 07:28 input.tar.gz
[2025-10-13 08:14:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:28 start_atlas.sh
[2025-10-13 08:14:53] -rw------- 1 boinc boinc 193606701 Oct 13 08:13 HITS.pool.root.1
[2025-10-13 08:14:53] -rw------- 1 boinc boinc    798720 Oct 13 08:14 result.tar.gz
08:14:55 (7885): run_atlas exited; CPU time 26330.502388
08:14:55 (7885): called boinc_finish(0)

</stderr_txt>
]]>

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