Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:26:07 (2812143): wrapper (7.7.26015): starting
17:26:07 (2812143): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:26:07] Arguments: --nthreads 8
[2025-10-12 17:26:07] Threads: 8
[2025-10-12 17:26:07] Checking for CVMFS
[2025-10-12 17:26:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:26:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:26:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:26:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:26:07] 2.10.1.0 4440 187609 168360 151638 1 188 16849738 18432000 3665 130560 2 226311190 99.991 7157556 5574 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 17:26:07] CVMFS is ok
[2025-10-12 17:26:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:26:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:26:07] Further information can be found at the LHC@home message board.
[2025-10-12 17:26:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:26:07] Checking for apptainer binary...
[2025-10-12 17:26:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:26:07] Running /usr/bin/apptainer --version
[2025-10-12 17:26:07] apptainer version 1.1.9-1.el8
[2025-10-12 17:26:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:26:08] c-16-31.aglt2.org
[2025-10-12 17:26:08] apptainer works
[2025-10-12 17:26:08] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:26:08] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:26:08] Starting ATLAS job with PandaID=6840390132
[2025-10-12 17:26:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:15:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:15:42] 2025-10-13 00:14:59,137 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:15:42] 2025-10-13 00:14:59,137 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:15:42] 2025-10-13 00:14:59,143 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:15:42] 2025-10-13 00:14:59,143 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 20:15:42] 2025-10-13 00:14:59,144 | INFO     | sum of deviations: 8254434325.5
[2025-10-12 20:15:42] 2025-10-13 00:14:59,145 | INFO     | mean x: 1760309437.5
[2025-10-12 20:15:42] 2025-10-13 00:14:59,145 | INFO     | mean y: 2497630.6325301207
[2025-10-12 20:15:42] 2025-10-13 00:14:59,145 | INFO     | -- intersect: -10241970281.745325
[2025-10-12 20:15:42] 2025-10-13 00:14:59,145 | INFO     | intersect: -10241970281.745325
[2025-10-12 20:15:42] 2025-10-13 00:14:59,146 | INFO     | chi2: 2.244858595291623
[2025-10-12 20:15:42] 2025-10-13 00:14:59,146 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,147 | INFO     | sum of deviations: 19119344070.000004
[2025-10-12 20:15:42] 2025-10-13 00:14:59,147 | INFO     | mean x: 1760309285.0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,147 | INFO     | mean y: 2510617.751552795
[2025-10-12 20:15:42] 2025-10-13 00:14:59,148 | INFO     | -- intersect: -26006430491.809265
[2025-10-12 20:15:42] 2025-10-13 00:14:59,148 | INFO     | intersect: -26006430491.809265
[2025-10-12 20:15:42] 2025-10-13 00:14:59,148 | INFO     | chi2: 1.446464944524356
[2025-10-12 20:15:42] 2025-10-13 00:14:59,148 | INFO     | current chi2=1.446464944524356 (change=35.56543171324116 %)
[2025-10-12 20:15:42] 2025-10-13 00:14:59,149 | INFO     | sum of square deviations: 1177156955.0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,150 | INFO     | sum of deviations: 18471185428.499996
[2025-10-12 20:15:42] 2025-10-13 00:14:59,150 | INFO     | mean x: 1760309132.5
[2025-10-12 20:15:42] 2025-10-13 00:14:59,150 | INFO     | mean y: 2509772.4294871795
[2025-10-12 20:15:42] 2025-10-13 00:14:59,150 | INFO     | -- intersect: -27619122381.024063
[2025-10-12 20:15:42] 2025-10-13 00:14:59,151 | INFO     | intersect: -27619122381.024063
[2025-10-12 20:15:42] 2025-10-13 00:14:59,151 | INFO     | chi2: 1.4478931748339587
[2025-10-12 20:15:42] 2025-10-13 00:14:59,151 | INFO     | current chi2=1.4478931748339587 (change=-0.09873936558292154 %)
[2025-10-12 20:15:42] 2025-10-13 00:14:59,151 | INFO     | right removable region: 155
[2025-10-12 20:15:42] 2025-10-13 00:14:59,152 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,153 | INFO     | sum of deviations: -16591372615.0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,153 | INFO     | mean x: 1760309590.0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,153 | INFO     | mean y: 2527684.0621118015
[2025-10-12 20:15:42] 2025-10-13 00:14:59,153 | INFO     | -- intersect: 22572554483.016487
[2025-10-12 20:15:42] 2025-10-13 00:14:59,154 | INFO     | intersect: 22572554483.016487
[2025-10-12 20:15:42] 2025-10-13 00:14:59,154 | INFO     | chi2: 0.8519568939599004
[2025-10-12 20:15:42] 2025-10-13 00:14:59,154 | INFO     | current chi2=0.8519568939599004 (change=62.048527433006306 %)
[2025-10-12 20:15:42] 2025-10-13 00:14:59,155 | INFO     | sum of square deviations: 1177156955.0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,156 | INFO     | sum of deviations: -16817729951.0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,156 | INFO     | mean x: 1760309742.5
[2025-10-12 20:15:42] 2025-10-13 00:14:59,156 | INFO     | mean y: 2527928.4615384615
[2025-10-12 20:15:42] 2025-10-13 00:14:59,156 | INFO     | -- intersect: 25151607457.520046
[2025-10-12 20:15:42] 2025-10-13 00:14:59,156 | INFO     | intersect: 25151607457.520046
[2025-10-12 20:15:42] 2025-10-13 00:14:59,157 | INFO     | chi2: 0.8413885506452609
[2025-10-12 20:15:42] 2025-10-13 00:14:59,157 | INFO     | current chi2=0.8413885506452609 (change=1.2404786427066514 %)
[2025-10-12 20:15:42] 2025-10-13 00:14:59,157 | INFO     | left removable region: 20
[2025-10-12 20:15:42] 2025-10-13 00:14:59,157 | INFO     | sum of square deviations: 762879420.0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,158 | INFO     | sum of deviations: -2091156738.0000007
[2025-10-12 20:15:42] 2025-10-13 00:14:59,159 | INFO     | mean x: 1760309712.0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,159 | INFO     | mean y: 2536954.422222222
[2025-10-12 20:15:42] 2025-10-13 00:14:59,159 | INFO     | -- intersect: 4827786422.04535
[2025-10-12 20:15:42] 2025-10-13 00:14:59,159 | INFO     | intersect: 4827786422.04535
[2025-10-12 20:15:42] 2025-10-13 00:14:59,159 | INFO     | chi2: 0.009124296755666245
[2025-10-12 20:15:42] 2025-10-13 00:14:59,160 | INFO     | -- intersect: 4827786422.04535
[2025-10-12 20:15:42] 2025-10-13 00:14:59,160 | INFO     | current memory leak: -2.74 B/s (using 135 data points, chi2=0.01)
[2025-10-12 20:15:42] 2025-10-13 00:14:59,160 | INFO     | could have reported an average CPU frequency of 2956 MHz (9 samples)
[2025-10-12 20:15:42] 2025-10-13 00:14:59,161 | INFO     | ..............................
[2025-10-12 20:15:42] 2025-10-13 00:14:59,161 | INFO     | . Timing measurements:
[2025-10-12 20:15:42] 2025-10-13 00:14:59,161 | INFO     | . get job = 0 s
[2025-10-12 20:15:42] 2025-10-13 00:14:59,161 | INFO     | . initial setup = 2 s
[2025-10-12 20:15:42] 2025-10-13 00:14:59,161 | INFO     | . payload setup = 5 s
[2025-10-12 20:15:42] 2025-10-13 00:14:59,161 | INFO     | . stage-in = 0 s
[2025-10-12 20:15:42] 2025-10-13 00:14:59,162 | INFO     | . payload execution = 10084 s
[2025-10-12 20:15:42] 2025-10-13 00:14:59,162 | INFO     | . stage-out = 1 s
[2025-10-12 20:15:42] 2025-10-13 00:14:59,162 | INFO     | . log creation = 0 s
[2025-10-12 20:15:42] 2025-10-13 00:14:59,162 | INFO     | ..............................
[2025-10-12 20:15:42] 2025-10-13 00:14:59,334 | INFO     | 
[2025-10-12 20:15:42] 2025-10-13 00:14:59,334 | INFO     | job summary report
[2025-10-12 20:15:42] 2025-10-13 00:14:59,334 | INFO     | --------------------------------------------------
[2025-10-12 20:15:42] 2025-10-13 00:14:59,334 | INFO     | PanDA job id: 6840390132
[2025-10-12 20:15:42] 2025-10-13 00:14:59,335 | INFO     | task id: 46676269
[2025-10-12 20:15:42] 2025-10-13 00:14:59,335 | INFO     | errors: (none)
[2025-10-12 20:15:42] 2025-10-13 00:14:59,335 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:15:42] 2025-10-13 00:14:59,335 | INFO     | pilot state: finished 
[2025-10-12 20:15:42] 2025-10-13 00:14:59,335 | INFO     | transexitcode: 0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,335 | INFO     | exeerrorcode: 0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,336 | INFO     | exeerrordiag: 
[2025-10-12 20:15:42] 2025-10-13 00:14:59,336 | INFO     | exitcode: 0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,336 | INFO     | exitmsg: OK
[2025-10-12 20:15:42] 2025-10-13 00:14:59,336 | INFO     | cpuconsumptiontime: 73772 s
[2025-10-12 20:15:42] 2025-10-13 00:14:59,336 | INFO     | nevents: 400
[2025-10-12 20:15:42] 2025-10-13 00:14:59,336 | INFO     | neventsw: 0
[2025-10-12 20:15:42] 2025-10-13 00:14:59,337 | INFO     | pid: 2835442
[2025-10-12 20:15:42] 2025-10-13 00:14:59,337 | INFO     | pgrp: 2835442
[2025-10-12 20:15:42] 2025-10-13 00:14:59,337 | INFO     | corecount: 8
[2025-10-12 20:15:42] 2025-10-13 00:14:59,337 | INFO     | event service: False
[2025-10-12 20:15:42] 2025-10-13 00:14:59,337 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 12: 2349203, 10093: 2377876, 10094: 2377875, 10096: 2387057, 10099: 2387113, 10103: 2387371}
[2025-10-12 20:15:42] 2025-10-13 00:14:59,337 | INFO     | --------------------------------------------------
[2025-10-12 20:15:42] 2025-10-13 00:14:59,338 | INFO     | 
[2025-10-12 20:15:42] 2025-10-13 00:14:59,338 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 20:15:42] 2025-10-13 00:14:59,359 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,359 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,360 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,360 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,361 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,361 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,361 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,361 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,361 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,362 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,362 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,362 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,362 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,362 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:15:42] 2025-10-13 00:14:59,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:15:42] 2025-10-13 00:14:59,363 | INFO     | job 6840390132 has completed (purged errors)
[2025-10-12 20:15:42] 2025-10-13 00:14:59,363 | INFO     | overall cleanup function is called
[2025-10-12 20:15:42] 2025-10-13 00:15:00,372 | INFO     | --- collectZombieJob: --- 10, [2835442]
[2025-10-12 20:15:42] 2025-10-13 00:15:00,372 | INFO     | zombie collector waiting for pid 2835442
[2025-10-12 20:15:42] 2025-10-13 00:15:00,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:15:42] 2025-10-13 00:15:00,373 | INFO     | collected zombie processes
[2025-10-12 20:15:42] 2025-10-13 00:15:00,373 | INFO     | will attempt to kill all subprocesses of pid=2835442
[2025-10-12 20:15:42] 2025-10-13 00:15:00,684 | INFO     | process IDs to be killed: [2835442] (in reverse order)
[2025-10-12 20:15:42] 2025-10-13 00:15:00,780 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:15:42] 2025-10-13 00:15:00,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:15:42] 2025-10-13 00:15:00,794 | INFO     | did not find any defunct processes belonging to 2835442
[2025-10-12 20:15:42] 2025-10-13 00:15:00,808 | INFO     | did not find any defunct processes belonging to 2835442
[2025-10-12 20:15:42] 2025-10-13 00:15:00,808 | INFO     | ready for new job
[2025-10-12 20:15:42] 2025-10-13 00:15:00,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:15:42] 2025-10-13 00:15:00,811 | INFO     | ***************************************
[2025-10-12 20:15:42] 2025-10-13 00:15:00,811 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:15:42] 2025-10-13 00:15:00,811 | INFO     | ***************************************
[2025-10-12 20:15:42] 2025-10-13 00:15:00,811 | INFO     | 
[2025-10-12 20:15:42] 2025-10-13 00:15:00,826 | INFO     | architecture information:
[2025-10-12 20:15:42] 2025-10-13 00:15:00,826 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:15:42] 2025-10-13 00:15:00,839 | INFO     | cat /etc/os-release:
[2025-10-12 20:15:42] NAME="CentOS Linux"
[2025-10-12 20:15:42] VERSION="7 (Core)"
[2025-10-12 20:15:42] ID="centos"
[2025-10-12 20:15:42] ID_LIKE="rhel fedora"
[2025-10-12 20:15:42] VERSION_ID="7"
[2025-10-12 20:15:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:15:42] ANSI_COLOR="0;31"
[2025-10-12 20:15:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:15:42] HOME_URL="https://www.centos.org/"
[2025-10-12 20:15:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:15:42] 
[2025-10-12 20:15:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:15:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:15:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:15:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:15:42] 
[2025-10-12 20:15:42] 2025-10-13 00:15:00,840 | INFO     | ***************************************
[2025-10-12 20:15:42] 2025-10-13 00:15:01,342 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 20:15:42] 2025-10-13 00:15:01,359 | INFO     | sufficient remaining disk space (103556317184 B)
[2025-10-12 20:15:42] 2025-10-13 00:15:01,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:15:42] 2025-10-13 00:15:01,360 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:15:42] 2025-10-13 00:15:01,360 | INFO     | update_server=False
[2025-10-12 20:15:42] 2025-10-13 00:15:01,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:15:42] 2025-10-13 00:15:01,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:15:42] 2025-10-13 00:15:01,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:15:42] 2025-10-13 00:15:01,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:15:42] 2025-10-13 00:15:01,362 | INFO     | aborting loop
[2025-10-12 20:15:42] 2025-10-13 00:15:02,010 | INFO     | all data control threads have been joined
[2025-10-12 20:15:42] 2025-10-13 00:15:02,365 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:02,368 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:02,393 | INFO     | all payload control threads have been joined
[2025-10-12 20:15:42] 2025-10-13 00:15:02,747 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:02,864 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:02,959 | INFO     | all job control threads have been joined
[2025-10-12 20:15:42] 2025-10-13 00:15:03,015 | INFO     | [data] control thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:03,367 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:03,398 | INFO     | [payload] control thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:03,598 | INFO     | [job] validate thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:03,655 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:03,690 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:03,691 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:03,751 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:03,964 | INFO     | [job] control thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:04,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:15:42] 2025-10-13 00:15:05,349 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:05,367 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:11,683 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:15:42] 2025-10-13 00:15:12,688 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:15:42] 2025-10-13 00:15:31,285 | INFO     | PID=2819295 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:15:42] 2025-10-13 00:15:31,285 | INFO     | .. there are 5 such processes running
[2025-10-12 20:15:42] 2025-10-13 00:15:31,287 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:15:42] 2025-10-13 00:15:31,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:15:42] 2025-10-13 00:15:31,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:15:42] 2025-10-13 00:15:36,166 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:15:42] 2025-10-13 00:15:36,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379147499328)>', '<ExcThread(monitor, started 140378573362944)>']
[2025-10-12 20:15:42] 2025-10-13 00:15:37,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:15:42] 2025-10-13 00:15:37,318 | INFO     | [monitor] control thread has ended
[2025-10-12 20:15:42] 2025-10-13 00:15:41,420 | INFO     | all workflow threads have been joined
[2025-10-12 20:15:42] 2025-10-13 00:15:41,421 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:15:42] 2025-10-13 00:15:41,421 | INFO     | traces error code: 0
[2025-10-12 20:15:42] 2025-10-13 00:15:41,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:15:42] 2025-10-13 00:15:41,539 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:15:42] 2025-10-13 00:15:41,542 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:15:42] 2025-10-13 00:15:41,545 [wrapper] pilotpid: 2819295
[2025-10-12 20:15:42] 2025-10-13 00:15:41,547 [wrapper] Pilot exit status: 0
[2025-10-12 20:15:42] 2025-10-13 00:15:41,557 [wrapper] pandaids: 6840390132
[2025-10-12 20:15:42] 2025-10-13 00:15:41,616 [wrapper] cleanup supervisor_pilot 1170637 2819296
[2025-10-12 20:15:42] 2025-10-13 00:15:41,618 [wrapper] Test setup, not cleaning
[2025-10-12 20:15:42] 2025-10-13 00:15:41,621 [wrapper] apfmon messages muted
[2025-10-12 20:15:42] 2025-10-13 00:15:41,623 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:15:42] 2025-10-13 00:15:41,625 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:15:42]  *** Error codes and diagnostics ***
[2025-10-12 20:15:42]     "exeErrorCode": 0,
[2025-10-12 20:15:42]     "exeErrorDiag": "",
[2025-10-12 20:15:42]     "pilotErrorCode": 0,
[2025-10-12 20:15:42]     "pilotErrorDiag": "",
[2025-10-12 20:15:42]  *** Listing of results directory ***
[2025-10-12 20:15:42] total 422716
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:15 queuedata.json
[2025-10-12 20:15:42] -rwx------ 1 boincer umatlas     36292 Oct 12 12:15 runpilot2-wrapper.sh
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas       100 Oct 12 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:15:42] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 17:26 run_atlas
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas       105 Oct 12 17:26 job.xml
[2025-10-12 20:15:42] -rw-r--r-- 2 boincer umatlas 223507449 Oct 12 17:26 EVNT.46676267._004732.pool.root.1
[2025-10-12 20:15:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:26 start_atlas.sh
[2025-10-12 20:15:42] drwxrwx--x 2 boincer umatlas      4096 Oct 12 17:26 shared
[2025-10-12 20:15:42] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 17:26 input.tar.gz
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas         0 Oct 12 17:26 boinc_lockfile
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 17:26 pandaJob.out
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas    975528 Oct 12 17:26 agis_schedconf.cvmfs.json
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas   1560580 Oct 12 17:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:15:42] drwx------ 5 boincer umatlas      4096 Oct 12 17:26 pilot3
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas      6013 Oct 12 20:10 init_data.xml
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas       530 Oct 12 20:14 boinc_task_state.xml
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas 201742492 Oct 12 20:14 HITS.46676269._083258.pool.root.1
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas      1048 Oct 12 20:14 memory_monitor_summary.json
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas    424490 Oct 12 20:14 log.46676269._083258.job.log.tgz.1
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas      7833 Oct 12 20:14 heartbeat.json
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas        95 Oct 12 20:15 pilot_heartbeat.json
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas        28 Oct 12 20:15 wrapper_checkpoint.txt
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas      4896 Oct 12 20:15 pilotlog.txt
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas   1428552 Oct 12 20:15 log.46676269._083258.job.log.1
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas       357 Oct 12 20:15 output.list
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas       620 Oct 12 20:15 runtime_log
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas   1873920 Oct 12 20:15 result.tar.gz
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 20:15 runtime_log.err
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas       658 Oct 12 20:15 eojMDmNuDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqOUMDmRUrRNm.diag
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 20:15 boinc_mmap_file
[2025-10-12 20:15:42] -rw-r--r-- 1 boincer umatlas     20914 Oct 12 20:15 stderr.txt
[2025-10-12 20:15:42] HITS file was successfully produced:
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas 201742492 Oct 12 20:14 shared/HITS.pool.root.1
[2025-10-12 20:15:42]  *** Contents of shared directory: ***
[2025-10-12 20:15:42] total 417700
[2025-10-12 20:15:42] -rw-r--r-- 2 boincer umatlas 223507449 Oct 12 17:26 ATLAS.root_0
[2025-10-12 20:15:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:26 start_atlas.sh
[2025-10-12 20:15:42] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 17:26 input.tar.gz
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas 201742492 Oct 12 20:14 HITS.pool.root.1
[2025-10-12 20:15:42] -rw------- 1 boincer umatlas   1873920 Oct 12 20:15 result.tar.gz
20:15:43 (2812143): run_atlas exited; CPU time 74113.006840
20:15:43 (2812143): called boinc_finish(0)

</stderr_txt>
]]>

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