Stderr output

<core_client_version>7.16.19</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 09:44:11 (78873): vboxwrapper version 26210
2025-10-13 09:44:11 (78873): BOINC client version: 7.16.19
2025-10-13 09:44:11 (78873): Detected: VirtualBox VboxManage Interface (Version: 5.0.26)
2025-10-13 09:44:11 (78873): Detected: Sandbox Configuration Enabled
2025-10-13 09:44:11 (78873): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 09:44:11 (78873): Create VM. (boinc_d6e663e92c899187, slot#0)
2025-10-13 09:44:11 (78873): Setting Memory Size for VM. (4200MB)
2025-10-13 09:44:11 (78873): Setting CPU Count for VM. (2)
2025-10-13 09:44:11 (78873): Setting Chipset Options for VM.
2025-10-13 09:44:12 (78873): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 09:44:12 (78873): Setting Boot Options for VM.
2025-10-13 09:44:12 (78873): Setting Network Configuration for NAT. (Driver: 82540EM)
2025-10-13 09:44:12 (78873): Enabling VM Network Access.
2025-10-13 09:44:12 (78873): Disabling USB Support for VM.
2025-10-13 09:44:12 (78873): Disabling COM Port Support for VM.
2025-10-13 09:44:12 (78873): Disabling Audio Support for VM.
2025-10-13 09:44:12 (78873): Disabling Clipboard Support for VM.
2025-10-13 09:44:12 (78873): Disabling Drag and Drop Support for VM.
2025-10-13 09:44:12 (78873): Adding storage controller(s) to VM.
2025-10-13 09:44:12 (78873): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 09:44:12 (78873): Adding VirtualBox Guest Additions to VM.
2025-10-13 09:44:12 (78873): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 09:44:12 (78873): forwarding host port 49427 to guest port 80
2025-10-13 09:44:13 (78873): Enabling remote desktop for VM.
2025-10-13 09:44:13 (78873): Required extension pack not installed, remote desktop not enabled.
2025-10-13 09:44:13 (78873): Enabling shared directory for VM.
2025-10-13 09:44:13 (78873): Starting VM using VBoxManage interface. (boinc_d6e663e92c899187, slot#0)
2025-10-13 09:44:14 (78873): Successfully started VM. (PID = '78940')
2025-10-13 09:44:14 (78873): Reporting VM Process ID to BOINC.
2025-10-13 09:44:14 (78873): Guest Log: BIOS: VirtualBox 5.0.26
2025-10-13 09:44:14 (78873): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 09:44:14 (78873): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 09:44:14 (78873): Detected: Web Application Enabled (http://localhost:49427)
2025-10-13 09:44:14 (78873): Preference change detected
2025-10-13 09:44:14 (78873): Setting CPU throttle for VM. (90%)
2025-10-13 09:44:14 (78873): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 09:44:16 (78873): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 09:44:16 (78873): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 09:44:19 (78873): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 09:44:19 (78873): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 09:44:19 (78873): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 09:44:25 (78873): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 09:44:25 (78873): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 09:44:38 (78873): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.000315 main     Log opened 2025-10-13T07:44:36.666134000Z
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.000485 main     OS Product: Linux
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.000556 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.000619 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.000682 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.000683 main     Process ID: 1263
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.000684 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.003250 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.005397 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.005626 main     Session 0 is about to close ...
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.005811 main     Stopping all guest processes ...
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.005882 main     Closing all guest files ...
2025-10-13 09:44:38 (78873): Guest Log: 00:00:00.006153 main     Ended.
2025-10-13 09:44:38 (78873): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 09:44:38 (78873): Guest Log: [INFO] Mounting shared directory
2025-10-13 09:44:38 (78873): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 09:45:11 (78873): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 09:45:11 (78873): Guest Log: [INFO] Detected branch: prod
2025-10-13 09:45:11 (78873): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 09:45:11 (78873): Guest Log: Copying input files
2025-10-13 09:45:14 (78873): Guest Log: Copied input files into RunAtlas.
2025-10-13 09:45:14 (78873): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-13 09:45:14 (78873): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-13 09:45:14 (78873): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-13 09:45:14 (78873): Guest Log: Further information can be found at the LHC@home message board.
2025-10-13 09:45:41 (78873): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 09:45:41 (78873): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 09:45:41 (78873): Guest Log: 2.6.3.0 1554 0 32192 151653 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-13 09:45:42 (78873): Guest Log: copied the webapp to /var/www
2025-10-13 09:45:42 (78873): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-13 09:45:42 (78873): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-13 09:45:43 (78873): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 09:45:43 (78873): Guest Log:  *** Starting ATLAS job. (PandaID=6840428798 taskID=46676269) ***
2025-10-13 11:23:49 (78873): Status Report: Elapsed Time: '6000.000000'
2025-10-13 11:23:49 (78873): Status Report: CPU Time: '8877.410000'
2025-10-13 12:23:17 (78873): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 12:24:16 (78873): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 13:04:25 (78873): Status Report: Elapsed Time: '12000.000000'
2025-10-13 13:04:25 (78873): Status Report: CPU Time: '19498.850000'
2025-10-13 14:44:01 (78873): Status Report: Elapsed Time: '18000.000000'
2025-10-13 14:44:01 (78873): Status Report: CPU Time: '30116.770000'
2025-10-13 16:23:37 (78873): Status Report: Elapsed Time: '24000.000000'
2025-10-13 16:23:37 (78873): Status Report: CPU Time: '40736.020000'
2025-10-13 18:03:12 (78873): Status Report: Elapsed Time: '30000.000000'
2025-10-13 18:03:12 (78873): Status Report: CPU Time: '51373.800000'
2025-10-13 19:42:48 (78873): Status Report: Elapsed Time: '36000.000000'
2025-10-13 19:42:48 (78873): Status Report: CPU Time: '62011.410000'
2025-10-13 19:53:35 (78873): Guest Log:  *** Job finished ***
2025-10-13 19:53:35 (78873): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:20,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:20,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:26,083 | INFO     | [monitor] cgroup control has ended
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:28,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943490996032)>', '<ExcThread(monitor, started 139943263917824)>']
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:29,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:29,093 | INFO     | [monitor] control thread has ended
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:33,357 | INFO     | all workflow threads have been joined
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:33,357 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:33,358 | INFO     | traces error code: 0
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:33,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:33,490 [wrapper] ==== pilot stdout END ====
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:33,500 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:33,507 [wrapper] pilotpid: 5973
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:33,514 [wrapper] Pilot exit status: 0
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:34,578 [wrapper] pandaids: 6840428798
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:34,645 [wrapper] cleanup supervisor_pilot 16904 5974
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:34,655 [wrapper] Test setup, not cleaning
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:34,662 [wrapper] apfmon messages muted
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:34,669 [wrapper] ==== wrapper stdout END ====
2025-10-13 19:53:35 (78873): Guest Log: 2025-10-13 17:52:34,683 [wrapper] ==== wrapper stderr END ====
2025-10-13 19:53:35 (78873): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 19:53:35 (78873): Guest Log:     "exeErrorCode": 0,
2025-10-13 19:53:35 (78873): Guest Log:     "exeErrorDiag": "",
2025-10-13 19:53:35 (78873): Guest Log:     "pilotErrorCode": 0,
2025-10-13 19:53:35 (78873): Guest Log:     "pilotErrorDiag": "",
2025-10-13 19:53:35 (78873): Guest Log:  *** Listing of results directory ***
2025-10-13 19:53:35 (78873): Guest Log: total 208128
2025-10-13 19:53:35 (78873): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 16:49 pilot3.tar.gz
2025-10-13 19:53:35 (78873): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 17:11 queuedata.json
2025-10-13 19:53:35 (78873): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 17:11 runpilot2-wrapper.sh
2025-10-13 19:53:35 (78873): Guest Log: -rw-r--r--. 1 atlas atlas      8378 Oct 13 07:45 init_data.xml
2025-10-13 19:53:35 (78873): Guest Log: -rw-r-----. 1 atlas atlas    569683 Oct 13 07:45 input.tar.gz
2025-10-13 19:53:35 (78873): Guest Log: -rw-r-----. 1 atlas atlas     15120 Oct 13 07:45 start_atlas.sh
2025-10-13 19:53:35 (78873): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 07:45 EVNT.46676267._004800.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 19:53:35 (78873): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 13 07:45 pandaJob.out
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas    972849 Oct 13 07:52 agis_schedconf.cvmfs.json
2025-10-13 19:53:35 (78873): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 07:52 pilot3
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas 198416271 Oct 13 17:50 HITS.46676269._084382.pool.root.1
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas      1028 Oct 13 17:51 memory_monitor_summary.json
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 17:51 pilot_heartbeat.json
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 17:51 agis_ddmendpoints.agis.ALL.json
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas    652039 Oct 13 17:51 log.46676269._084382.job.log.tgz.1
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas      7827 Oct 13 17:51 heartbeat.json
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 13 17:52 pilotlog.txt
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas   4783254 Oct 13 17:52 log.46676269._084382.job.log.1
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 17:52 output.list
2025-10-13 19:53:35 (78873): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 17:52 runtime_log
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas   5457920 Oct 13 17:52 result.tar.gz
2025-10-13 19:53:35 (78873): Guest Log: -rw-r--r--. 1 atlas atlas      8661 Oct 13 17:52 runtime_log.err
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas       667 Oct 13 17:52 JACNDmXmES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmenkNDmGu4Fjm.diag
2025-10-13 19:53:35 (78873): Guest Log: Looking for outputfile HITS.46676269._084382.pool.root.1
2025-10-13 19:53:35 (78873): Guest Log: HITS file was successfully produced
2025-10-13 19:53:35 (78873): Guest Log: -rw-------. 1 atlas atlas 198416271 Oct 13 17:50 /home/atlas/RunAtlas/HITS.46676269._084382.pool.root.1
2025-10-13 19:53:35 (78873): Guest Log: Successfully finished the ATLAS job!
2025-10-13 19:53:35 (78873): Guest Log: Copying the results back to the shared directory!
2025-10-13 19:53:35 (78873): Guest Log:  *** Contents of shared directory: ***
2025-10-13 19:53:35 (78873): Guest Log: total 221804
2025-10-13 19:53:35 (78873): Guest Log: -rw-rw----. 1 root root 221064967 Oct 13 07:44 ATLAS.root_0
2025-10-13 19:53:35 (78873): Guest Log: -rw-rw-r--. 1 root root      8378 Oct 13 07:44 init_data.xml
2025-10-13 19:53:35 (78873): Guest Log: -rw-rw----. 1 root root    569683 Oct 13 07:44 input.tar.gz
2025-10-13 19:53:35 (78873): Guest Log: -rw-r--r--. 1 root root   5457920 Oct 13  2025 result.tar.gz
2025-10-13 19:53:35 (78873): Guest Log: -rw-rw----. 1 root root     15120 Oct 13 07:44 start_atlas.sh
2025-10-13 19:53:35 (78873): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 19:53:35 (78873): VM Completion File Detected.
2025-10-13 19:53:35 (78873): Powering off VM.
2025-10-13 19:53:36 (78873): Successfully stopped VM.
2025-10-13 19:53:36 (78873): Deregistering VM. (boinc_d6e663e92c899187, slot#0)
2025-10-13 19:53:36 (78873): Removing network bandwidth throttle group from VM.
2025-10-13 19:53:36 (78873): Removing VM from VirtualBox.
2025-10-13 19:53:41 (78873): called boinc_finish(0)

</stderr_txt>
]]>

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