Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
10:56:36 (670957): wrapper (7.7.26015): starting
10:56:36 (670957): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 10:56:36] Arguments: --nthreads 12
[2025-10-13 10:56:36] Threads: 12
[2025-10-13 10:56:36] Checking for CVMFS
[2025-10-13 10:56:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:56:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:56:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:56:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:56:36] 2.11.4.0 4009 4059 136552 151654 1 188 3506943 4096001 912 130560 1 15061380 99.998 141994 501 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 10:56:36] CVMFS is ok
[2025-10-13 10:56:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:56:36] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 10:56:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 10:56:36] Further information can be found at the LHC@home message board.
[2025-10-13 10:56:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:56:36] Checking for apptainer binary...
[2025-10-13 10:56:36] which: no apptainer in (/home/ti-kako/.local/bin:/home/ti-kako/bin:/usr/lib64/ccache:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-13 10:56:36] apptainer is not installed, using version from CVMFS
[2025-10-13 10:56:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:56:37] sonata
[2025-10-13 10:56:37] apptainer works
[2025-10-13 10:56:37] Set ATHENA_PROC_NUMBER=12
[2025-10-13 10:56:37] Set ATHENA_CORE_NUMBER=12
[2025-10-13 10:56:37] Starting ATLAS job with PandaID=6840714538
[2025-10-13 10:56:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:36:55]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:36:55]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6840714538/log.46676269._087934.job.log.tgz.1
[2025-10-13 11:36:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/2c/log.46676269._087934.job.log.tgz.1
[2025-10-13 11:36:55]  workdir=None
[2025-10-13 11:36:55] ]
[2025-10-13 11:36:55] 2025-10-13 09:35:50,521 | INFO     | transferring file log.46676269._087934.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6840714538/log.46676269._087934.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 11:36:55] 2025-10-13 09:35:50,521 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6840714538/log.46676269._087934.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._087934.job
[2025-10-13 11:36:55] 2025-10-13 09:35:50,541 | INFO     | adding to output.list: log.46676269._087934.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/2c/log.46676269._087934.job.log.tg
[2025-10-13 11:36:55] 2025-10-13 09:35:50,542 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 11:36:55] 2025-10-13 09:35:50,542 | INFO     | summary of transferred files:
[2025-10-13 11:36:55] 2025-10-13 09:35:50,542 | INFO     |  -- lfn=log.46676269._087934.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 11:36:55] 2025-10-13 09:35:50,542 | INFO     | stage-out finished correctly
[2025-10-13 11:36:55] 2025-10-13 09:35:50,578 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 11:36:55] 2025-10-13 09:35:51,811 | INFO     | job 6840714538 has state=finished
[2025-10-13 11:36:55] 2025-10-13 09:35:51,811 | INFO     | preparing for final server update for job 6840714538 in state='finished'
[2025-10-13 11:36:55] 2025-10-13 09:35:51,812 | INFO     | this job has now completed (state=finished)
[2025-10-13 11:36:55] 2025-10-13 09:35:51,812 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 11:36:55] 2025-10-13 09:35:51,812 | INFO     | log transfer has been attempted: DONE
[2025-10-13 11:36:55] 2025-10-13 09:35:51,812 | INFO     | job 6840714538 has finished - writing final server update
[2025-10-13 11:36:55] 2025-10-13 09:35:51,812 | INFO     | total number of processed events: 400 (read)
[2025-10-13 11:36:55] 2025-10-13 09:35:51,813 | INFO     | executing command: lscpu
[2025-10-13 11:36:55] 2025-10-13 09:35:51,821 | INFO     | monitor loop #179: job 0:6840714538 is in state 'finished'
[2025-10-13 11:36:55] 2025-10-13 09:35:51,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:36:55] 2025-10-13 09:35:51,840 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 11:36:55] 2025-10-13 09:35:52,342 | INFO     | time since job start (2346s) is within the limit (172800.0s)
[2025-10-13 11:36:55] 2025-10-13 09:35:54,324 | INFO     | monitor loop #180: job 0:6840714538 is in state 'finished'
[2025-10-13 11:36:55] 2025-10-13 09:35:54,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:36:55] 2025-10-13 09:35:54,348 | INFO     | time since job start (2348s) is within the limit (172800.0s)
[2025-10-13 11:36:55] 2025-10-13 09:35:56,353 | INFO     | time since job start (2350s) is within the limit (172800.0s)
[2025-10-13 11:36:55] 2025-10-13 09:35:56,827 | INFO     | monitor loop #181: job 0:6840714538 is in state 'finished'
[2025-10-13 11:36:55] 2025-10-13 09:35:56,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:36:55] 2025-10-13 09:35:58,359 | INFO     | time since job start (2352s) is within the limit (172800.0s)
[2025-10-13 11:36:55] 2025-10-13 09:35:59,330 | INFO     | monitor loop #182: job 0:6840714538 is in state 'finished'
[2025-10-13 11:36:55] 2025-10-13 09:35:59,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:36:55] 2025-10-13 09:35:59,758 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 11:36:55] 2025-10-13 09:35:59,762 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3637.6934687499997
[2025-10-13 11:36:55] 2025-10-13 09:35:59,765 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6840714538/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:36:55] 2025-10-13 09:35:59,766 | INFO     | extracted standard info from prmon json
[2025-10-13 11:36:55] 2025-10-13 09:35:59,766 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:36:55] 2025-10-13 09:35:59,766 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:36:55] 2025-10-13 09:35:59,766 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:36:55] 2025-10-13 09:35:59,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:36:55] 2025-10-13 09:35:59,767 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:36:55] 2025-10-13 09:35:59,767 | INFO     | sum of square deviations: 9228080.0
[2025-10-13 11:36:55] 2025-10-13 09:35:59,767 | INFO     | sum of deviations: -1170113834.0
[2025-10-13 11:36:55] 2025-10-13 09:35:59,767 | INFO     | mean x: 1760347049.0
[2025-10-13 11:36:55] 2025-10-13 09:35:59,767 | INFO     | mean y: 2770454.7419354836
[2025-10-13 11:36:55] 2025-10-13 09:35:59,767 | INFO     | -- intersect: 223213496269.4267
[2025-10-13 11:36:55] 2025-10-13 09:35:59,767 | INFO     | intersect: 223213496269.4267
[2025-10-13 11:36:55] 2025-10-13 09:35:59,767 | INFO     | chi2: 0.011472775095051917
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | -- intersect: 223213496269.4267
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | current memory leak: -126.80 B/s (using 31 data points, chi2=0.01)
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | could have reported an average CPU frequency of 3646 MHz (5 samples)
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | ..............................
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | . Timing measurements:
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | . get job = 0 s
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | . initial setup = 1 s
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | . payload setup = 4 s
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | . stage-in = 0 s
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | . payload execution = 2321 s
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | . stage-out = 0 s
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | . log creation = 0 s
[2025-10-13 11:36:55] 2025-10-13 09:35:59,768 | INFO     | ..............................
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | 
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | job summary report
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | --------------------------------------------------
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | PanDA job id: 6840714538
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | task id: 46676269
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | errors: (none)
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | pilot state: finished 
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | transexitcode: 0
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | exeerrorcode: 0
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | exeerrordiag: 
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | exitcode: 0
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | exitmsg: OK
[2025-10-13 11:36:55] 2025-10-13 09:35:59,824 | INFO     | cpuconsumptiontime: 24889 s
[2025-10-13 11:36:55] 2025-10-13 09:35:59,825 | INFO     | nevents: 400
[2025-10-13 11:36:55] 2025-10-13 09:35:59,825 | INFO     | neventsw: 0
[2025-10-13 11:36:55] 2025-10-13 09:35:59,825 | INFO     | pid: 681442
[2025-10-13 11:36:55] 2025-10-13 09:35:59,825 | INFO     | pgrp: 681442
[2025-10-13 11:36:55] 2025-10-13 09:35:59,825 | INFO     | corecount: 12
[2025-10-13 11:36:55] 2025-10-13 09:35:59,825 | INFO     | event service: False
[2025-10-13 11:36:55] 2025-10-13 09:35:59,825 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 2330: 2383337, 2340: 2383507}
[2025-10-13 11:36:55] 2025-10-13 09:35:59,825 | INFO     | --------------------------------------------------
[2025-10-13 11:36:55] 2025-10-13 09:35:59,825 | INFO     | 
[2025-10-13 11:36:55] 2025-10-13 09:35:59,825 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-13 11:36:55] 2025-10-13 09:35:59,845 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:36:55] 2025-10-13 09:35:59,846 | INFO     | job 6840714538 has completed (purged errors)
[2025-10-13 11:36:55] 2025-10-13 09:35:59,847 | INFO     | overall cleanup function is called
[2025-10-13 11:36:55] 2025-10-13 09:36:00,854 | INFO     | --- collectZombieJob: --- 10, [681442]
[2025-10-13 11:36:55] 2025-10-13 09:36:00,855 | INFO     | zombie collector waiting for pid 681442
[2025-10-13 11:36:55] 2025-10-13 09:36:00,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:36:55] 2025-10-13 09:36:00,855 | INFO     | collected zombie processes
[2025-10-13 11:36:55] 2025-10-13 09:36:00,855 | INFO     | will attempt to kill all subprocesses of pid=681442
[2025-10-13 11:36:55] 2025-10-13 09:36:01,034 | INFO     | process IDs to be killed: [681442] (in reverse order)
[2025-10-13 11:36:55] 2025-10-13 09:36:01,106 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:36:55] 2025-10-13 09:36:01,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:36:55] 2025-10-13 09:36:01,110 | INFO     | did not find any defunct processes belonging to 681442
[2025-10-13 11:36:55] 2025-10-13 09:36:01,114 | INFO     | did not find any defunct processes belonging to 681442
[2025-10-13 11:36:55] 2025-10-13 09:36:01,114 | INFO     | ready for new job
[2025-10-13 11:36:55] 2025-10-13 09:36:01,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:36:55] 2025-10-13 09:36:01,115 | INFO     | ***************************************
[2025-10-13 11:36:55] 2025-10-13 09:36:01,115 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:36:55] 2025-10-13 09:36:01,115 | INFO     | ***************************************
[2025-10-13 11:36:55] 2025-10-13 09:36:01,115 | INFO     | 
[2025-10-13 11:36:55] 2025-10-13 09:36:01,117 | INFO     | architecture information:
[2025-10-13 11:36:55] 2025-10-13 09:36:01,117 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:36:55] 2025-10-13 09:36:01,130 | INFO     | cat /etc/os-release:
[2025-10-13 11:36:55] NAME="CentOS Linux"
[2025-10-13 11:36:55] VERSION="7 (Core)"
[2025-10-13 11:36:55] ID="centos"
[2025-10-13 11:36:55] ID_LIKE="rhel fedora"
[2025-10-13 11:36:55] VERSION_ID="7"
[2025-10-13 11:36:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:36:55] ANSI_COLOR="0;31"
[2025-10-13 11:36:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:36:55] HOME_URL="https://www.centos.org/"
[2025-10-13 11:36:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:36:55] 
[2025-10-13 11:36:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:36:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:36:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:36:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:36:55] 
[2025-10-13 11:36:55] 2025-10-13 09:36:01,130 | INFO     | ***************************************
[2025-10-13 11:36:55] 2025-10-13 09:36:01,633 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-13 11:36:55] 2025-10-13 09:36:01,653 | INFO     | sufficient remaining disk space (966001688576 B)
[2025-10-13 11:36:55] 2025-10-13 09:36:01,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:36:55] 2025-10-13 09:36:01,653 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:36:55] 2025-10-13 09:36:01,653 | INFO     | update_server=False
[2025-10-13 11:36:55] 2025-10-13 09:36:01,653 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:36:55] 2025-10-13 09:36:01,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:36:55] 2025-10-13 09:36:01,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:36:55] 2025-10-13 09:36:01,654 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:36:55] 2025-10-13 09:36:01,833 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 11:36:55] 2025-10-13 09:36:01,833 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 11:36:55] 2025-10-13 09:36:01,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:36:55] 2025-10-13 09:36:01,834 | INFO     | will abort loop
[2025-10-13 11:36:55] 2025-10-13 09:36:01,854 | INFO     | all payload control threads have been joined
[2025-10-13 11:36:55] 2025-10-13 09:36:02,262 | INFO     | all data control threads have been joined
[2025-10-13 11:36:55] 2025-10-13 09:36:02,455 | INFO     | all job control threads have been joined
[2025-10-13 11:36:55] 2025-10-13 09:36:02,658 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:02,659 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:02,799 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:02,835 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:02,860 | INFO     | [payload] control thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:03,081 | INFO     | [job] validate thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:03,229 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:03,268 | INFO     | [data] control thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:03,322 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:03,353 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:03,461 | INFO     | [job] control thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:03,606 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:03,654 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:03,831 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:05,660 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:11,950 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:36:55] 2025-10-13 09:36:12,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:36:55] 2025-10-13 09:36:31,609 | INFO     | PID=674798 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 11:36:55] 2025-10-13 09:36:31,609 | INFO     | .. there are 2 such processes running
[2025-10-13 11:36:55] 2025-10-13 09:36:31,609 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:36:55] 2025-10-13 09:36:31,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:36:55] 2025-10-13 09:36:31,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:36:55] 2025-10-13 09:36:49,704 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:36:55] 2025-10-13 09:36:50,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966535202624)>', '<ExcThread(monitor, started 139965853849344)>']
[2025-10-13 11:36:55] 2025-10-13 09:36:51,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:36:55] 2025-10-13 09:36:51,705 | INFO     | [monitor] control thread has ended
[2025-10-13 11:36:55] 2025-10-13 09:36:55,772 | INFO     | all workflow threads have been joined
[2025-10-13 11:36:55] 2025-10-13 09:36:55,772 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:36:55] 2025-10-13 09:36:55,772 | INFO     | traces error code: 0
[2025-10-13 11:36:55] 2025-10-13 09:36:55,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:36:55] 2025-10-13 09:36:55,859 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:36:55] 2025-10-13 09:36:55,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:36:55] 2025-10-13 09:36:55,864 [wrapper] pilotpid: 674798
[2025-10-13 11:36:55] 2025-10-13 09:36:55,866 [wrapper] Pilot exit status: 0
[2025-10-13 11:36:55] 2025-10-13 09:36:55,874 [wrapper] pandaids: 6840714538
[2025-10-13 11:36:55] 2025-10-13 09:36:55,911 [wrapper] cleanup supervisor_pilot  690942 674799
[2025-10-13 11:36:55] 2025-10-13 09:36:55,914 [wrapper] Test setup, not cleaning
[2025-10-13 11:36:55] 2025-10-13 09:36:55,916 [wrapper] apfmon messages muted
[2025-10-13 11:36:55] 2025-10-13 09:36:55,918 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:36:55] 2025-10-13 09:36:55,921 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:36:55]  *** Error codes and diagnostics ***
[2025-10-13 11:36:55]     "exeErrorCode": 0,
[2025-10-13 11:36:55]     "exeErrorDiag": "",
[2025-10-13 11:36:55]     "pilotErrorCode": 0,
[2025-10-13 11:36:55]     "pilotErrorDiag": "",
[2025-10-13 11:36:55]  *** Listing of results directory ***
[2025-10-13 11:36:55] total 408740
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako    557409 12 oct.  21:50 pilot3.tar.gz
[2025-10-13 11:36:55] -rwx------ 1 ti-kako ti-kako     36292 12 oct.  21:50 runpilot2-wrapper.sh
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako      5112 12 oct.  21:50 queuedata.json
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako       100 13 oct.  10:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:36:55] -rwxr-xr-x 1 ti-kako ti-kako      7986 13 oct.  10:56 run_atlas
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako       105 13 oct.  10:56 job.xml
[2025-10-13 11:36:55] -rw-r--r-- 2 ti-kako ti-kako 221861643 13 oct.  10:56 EVNT.46676267._004472.pool.root.1
[2025-10-13 11:36:55] -rw-r--r-- 2 ti-kako ti-kako    569675 13 oct.  10:56 input.tar.gz
[2025-10-13 11:36:55] -rw-r--r-- 2 ti-kako ti-kako     15120 13 oct.  10:56 start_atlas.sh
[2025-10-13 11:36:55] drwxrwx--x 1 ti-kako ti-kako        76 13 oct.  10:56 shared
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako         0 13 oct.  10:56 boinc_setup_complete
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako      8913 13 oct.  10:56 init_data.xml
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako         0 13 oct.  10:56 boinc_lockfile
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako      2550 13 oct.  10:56 pandaJob.out
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako    972857 13 oct.  10:56 agis_schedconf.cvmfs.json
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako   1560580 13 oct.  10:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:36:55] drwx------ 1 ti-kako ti-kako       414 13 oct.  10:56 pilot3
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako 191352416 13 oct.  11:35 HITS.46676269._087934.pool.root.1
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako       529 13 oct.  11:35 boinc_task_state.xml
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako      1019 13 oct.  11:35 memory_monitor_summary.json
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako    343950 13 oct.  11:35 log.46676269._087934.job.log.tgz.1
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako      7741 13 oct.  11:35 heartbeat.json
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako        95 13 oct.  11:36 pilot_heartbeat.json
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako        27 13 oct.  11:36 wrapper_checkpoint.txt
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako      8192 13 oct.  11:36 boinc_mmap_file
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako      5081 13 oct.  11:36 pilotlog.txt
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako    380205 13 oct.  11:36 log.46676269._087934.job.log.1
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako       357 13 oct.  11:36 output.list
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako       620 13 oct.  11:36 runtime_log
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako    747520 13 oct.  11:36 result.tar.gz
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako      8645 13 oct.  11:36 runtime_log.err
[2025-10-13 11:36:55] -rw------- 1 ti-kako ti-kako       638 13 oct.  11:36 GmQMDmqGHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1rUMDmW7lF2m.diag
[2025-10-13 11:36:55] -rw-r--r-- 1 ti-kako ti-kako     22437 13 oct.  11:36 stderr.txt
[2025-10-13 11:36:56] HITS file was successfully produced:
[2025-10-13 11:36:56] -rw------- 1 ti-kako ti-kako 191352416 13 oct.  11:35 shared/HITS.pool.root.1
[2025-10-13 11:36:56]  *** Contents of shared directory: ***
[2025-10-13 11:36:56] total 404840
[2025-10-13 11:36:56] -rw-r--r-- 2 ti-kako ti-kako 221861643 13 oct.  10:56 ATLAS.root_0
[2025-10-13 11:36:56] -rw-r--r-- 2 ti-kako ti-kako    569675 13 oct.  10:56 input.tar.gz
[2025-10-13 11:36:56] -rw-r--r-- 2 ti-kako ti-kako     15120 13 oct.  10:56 start_atlas.sh
[2025-10-13 11:36:56] -rw------- 1 ti-kako ti-kako 191352416 13 oct.  11:35 HITS.pool.root.1
[2025-10-13 11:36:56] -rw------- 1 ti-kako ti-kako    747520 13 oct.  11:36 result.tar.gz
11:36:57 (670957): run_atlas exited; CPU time 24913.661474
11:36:57 (670957): called boinc_finish(0)

</stderr_txt>
]]>

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