Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:32:25 (2632528): wrapper (7.7.26015): starting
13:32:25 (2632528): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 13:32:25] Arguments: --nthreads 6
[2025-10-13 13:32:25] Threads: 6
[2025-10-13 13:32:25] Checking for CVMFS
[2025-10-13 13:32:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:32:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:32:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:32:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:32:26] 2.11.5.0 3385007 5373 97780 151649 3 57 13635755 20971521 929 130560 0 10667184 99.996 184233 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 13:32:26] CVMFS is ok
[2025-10-13 13:32:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:32:26] Checking for apptainer binary...
[2025-10-13 13:32:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:32:26] Running /usr/bin/apptainer --version
[2025-10-13 13:32:26] apptainer version 1.3.6-1.el9
[2025-10-13 13:32:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:32:26] testio006
[2025-10-13 13:32:26] apptainer works
[2025-10-13 13:32:26] Set ATHENA_PROC_NUMBER=6
[2025-10-13 13:32:26] Set ATHENA_CORE_NUMBER=6
[2025-10-13 13:32:26] Starting ATLAS job with PandaID=6840714487
[2025-10-13 13:32:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:52:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:52:09] 2025-10-13 05:51:12,173 | INFO     | time since job start (4716s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:13,735 | INFO     | monitor loop #367: job 0:6840714487 is in state 'finished'
[2025-10-13 14:52:09] 2025-10-13 05:51:13,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:52:09] 2025-10-13 05:51:14,178 | INFO     | time since job start (4718s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:16,184 | INFO     | time since job start (4720s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:16,236 | INFO     | monitor loop #368: job 0:6840714487 is in state 'finished'
[2025-10-13 14:52:09] 2025-10-13 05:51:16,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:52:09] 2025-10-13 05:51:18,189 | INFO     | time since job start (4722s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:18,189 | INFO     | 4726s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 14:52:09] 2025-10-13 05:51:18,738 | INFO     | monitor loop #369: job 0:6840714487 is in state 'finished'
[2025-10-13 14:52:09] 2025-10-13 05:51:18,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:52:09] 2025-10-13 05:51:20,194 | INFO     | time since job start (4724s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:21,241 | INFO     | monitor loop #370: job 0:6840714487 is in state 'finished'
[2025-10-13 14:52:09] 2025-10-13 05:51:21,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:52:09] 2025-10-13 05:51:22,199 | INFO     | time since job start (4726s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:23,281 | INFO     | PID=2636325 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:52:09] 2025-10-13 05:51:23,281 | INFO     | .. there are 2 such processes running
[2025-10-13 14:52:09] 2025-10-13 05:51:23,743 | INFO     | monitor loop #371: job 0:6840714487 is in state 'finished'
[2025-10-13 14:52:09] 2025-10-13 05:51:23,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:52:09] 2025-10-13 05:51:24,281 | INFO     | time since job start (4728s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:26,246 | INFO     | monitor loop #372: job 0:6840714487 is in state 'finished'
[2025-10-13 14:52:09] 2025-10-13 05:51:26,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:52:09] 2025-10-13 05:51:26,286 | INFO     | time since job start (4730s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:28,291 | INFO     | time since job start (4732s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:28,749 | INFO     | monitor loop #373: job 0:6840714487 is in state 'finished'
[2025-10-13 14:52:09] 2025-10-13 05:51:28,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:52:09] 2025-10-13 05:51:30,297 | INFO     | time since job start (4734s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:31,252 | INFO     | monitor loop #374: job 0:6840714487 is in state 'finished'
[2025-10-13 14:52:09] 2025-10-13 05:51:31,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:52:09] 2025-10-13 05:51:32,302 | INFO     | time since job start (4736s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:33,755 | INFO     | monitor loop #375: job 0:6840714487 is in state 'finished'
[2025-10-13 14:52:09] 2025-10-13 05:51:33,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:52:09] 2025-10-13 05:51:34,308 | INFO     | time since job start (4738s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:36,258 | INFO     | monitor loop #376: job 0:6840714487 is in state 'finished'
[2025-10-13 14:52:09] 2025-10-13 05:51:36,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:52:09] 2025-10-13 05:51:36,313 | INFO     | time since job start (4740s) is within the limit (172800.0s)
[2025-10-13 14:52:09] 2025-10-13 05:51:37,679 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 14:52:09] 2025-10-13 05:51:37,682 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4003.0226249999996
[2025-10-13 14:52:09] 2025-10-13 05:51:37,684 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840714487/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:52:09] 2025-10-13 05:51:37,685 | INFO     | extracted standard info from prmon json
[2025-10-13 14:52:09] 2025-10-13 05:51:37,685 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 14:52:09] 2025-10-13 05:51:37,685 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:52:09] 2025-10-13 05:51:37,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:52:09] 2025-10-13 05:51:37,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:52:09] 2025-10-13 05:51:37,686 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:52:09] 2025-10-13 05:51:37,687 | INFO     | sum of square deviations: 101844144.86956538
[2025-10-13 14:52:09] 2025-10-13 05:51:37,687 | INFO     | sum of deviations: -5970253135.043479
[2025-10-13 14:52:09] 2025-10-13 05:51:37,687 | INFO     | mean x: 1760332357.0434783
[2025-10-13 14:52:09] 2025-10-13 05:51:37,687 | INFO     | mean y: 2543930.6811594204
[2025-10-13 14:52:09] 2025-10-13 05:51:37,687 | INFO     | -- intersect: 103195808372.31673
[2025-10-13 14:52:09] 2025-10-13 05:51:37,687 | INFO     | intersect: 103195808372.31673
[2025-10-13 14:52:09] 2025-10-13 05:51:37,687 | INFO     | chi2: 0.044152690853323184
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | -- intersect: 103195808372.31673
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | current memory leak: -58.62 B/s (using 69 data points, chi2=0.04)
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | could have reported an average CPU frequency of 3984 MHz (6 samples)
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | ..............................
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | . Timing measurements:
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | . get job = 0 s
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | . initial setup = 5 s
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | . payload setup = 3 s
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | . stage-in = 0 s
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | . payload execution = 4638 s
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | . stage-out = 0 s
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | . log creation = 0 s
[2025-10-13 14:52:09] 2025-10-13 05:51:37,688 | INFO     | ..............................
[2025-10-13 14:52:09] 2025-10-13 05:51:37,744 | INFO     | 
[2025-10-13 14:52:09] 2025-10-13 05:51:37,744 | INFO     | job summary report
[2025-10-13 14:52:09] 2025-10-13 05:51:37,744 | INFO     | --------------------------------------------------
[2025-10-13 14:52:09] 2025-10-13 05:51:37,744 | INFO     | PanDA job id: 6840714487
[2025-10-13 14:52:09] 2025-10-13 05:51:37,744 | INFO     | task id: 46676269
[2025-10-13 14:52:09] 2025-10-13 05:51:37,744 | INFO     | errors: (none)
[2025-10-13 14:52:09] 2025-10-13 05:51:37,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:52:09] 2025-10-13 05:51:37,744 | INFO     | pilot state: finished 
[2025-10-13 14:52:09] 2025-10-13 05:51:37,744 | INFO     | transexitcode: 0
[2025-10-13 14:52:09] 2025-10-13 05:51:37,744 | INFO     | exeerrorcode: 0
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | exeerrordiag: 
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | exitcode: 0
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | exitmsg: OK
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | cpuconsumptiontime: 25389 s
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | nevents: 400
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | neventsw: 0
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | pid: 2643101
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | pgrp: 2643101
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | corecount: 6
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | event service: False
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | sizes: {0: 2348855, 3: 2349117, 11: 2349145, 4646: 2375369, 4648: 2384367, 4649: 2384423, 4728: 2384745}
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | --------------------------------------------------
[2025-10-13 14:52:09] 2025-10-13 05:51:37,745 | INFO     | 
[2025-10-13 14:52:09] 2025-10-13 05:51:37,746 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 14:52:09] 2025-10-13 05:51:37,758 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,758 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,758 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,758 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | job 6840714487 has completed (purged errors)
[2025-10-13 14:52:09] 2025-10-13 05:51:37,759 | INFO     | overall cleanup function is called
[2025-10-13 14:52:09] 2025-10-13 05:51:38,766 | INFO     | --- collectZombieJob: --- 10, [2643101]
[2025-10-13 14:52:09] 2025-10-13 05:51:38,766 | INFO     | zombie collector waiting for pid 2643101
[2025-10-13 14:52:09] 2025-10-13 05:51:38,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:52:09] 2025-10-13 05:51:38,766 | INFO     | collected zombie processes
[2025-10-13 14:52:09] 2025-10-13 05:51:38,766 | INFO     | will attempt to kill all subprocesses of pid=2643101
[2025-10-13 14:52:09] 2025-10-13 05:51:38,830 | INFO     | process IDs to be killed: [2643101] (in reverse order)
[2025-10-13 14:52:09] 2025-10-13 05:51:38,859 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:52:09] 2025-10-13 05:51:38,859 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:52:09] 2025-10-13 05:51:38,862 | INFO     | did not find any defunct processes belonging to 2643101
[2025-10-13 14:52:09] 2025-10-13 05:51:38,864 | INFO     | did not find any defunct processes belonging to 2643101
[2025-10-13 14:52:09] 2025-10-13 05:51:38,864 | INFO     | ready for new job
[2025-10-13 14:52:09] 2025-10-13 05:51:38,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:52:09] 2025-10-13 05:51:38,865 | INFO     | ***************************************
[2025-10-13 14:52:09] 2025-10-13 05:51:38,865 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:52:09] 2025-10-13 05:51:38,865 | INFO     | ***************************************
[2025-10-13 14:52:09] 2025-10-13 05:51:38,865 | INFO     | 
[2025-10-13 14:52:09] 2025-10-13 05:51:38,866 | INFO     | architecture information:
[2025-10-13 14:52:09] 2025-10-13 05:51:38,866 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:52:09] 2025-10-13 05:51:38,875 | INFO     | cat /etc/os-release:
[2025-10-13 14:52:09] NAME="CentOS Linux"
[2025-10-13 14:52:09] VERSION="7 (Core)"
[2025-10-13 14:52:09] ID="centos"
[2025-10-13 14:52:09] ID_LIKE="rhel fedora"
[2025-10-13 14:52:09] VERSION_ID="7"
[2025-10-13 14:52:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:52:09] ANSI_COLOR="0;31"
[2025-10-13 14:52:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:52:09] HOME_URL="https://www.centos.org/"
[2025-10-13 14:52:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:52:09] 
[2025-10-13 14:52:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:52:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:52:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:52:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:52:09] 
[2025-10-13 14:52:09] 2025-10-13 05:51:38,876 | INFO     | ***************************************
[2025-10-13 14:52:09] 2025-10-13 05:51:39,379 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 14:52:09] 2025-10-13 05:51:39,389 | INFO     | sufficient remaining disk space (83093356544 B)
[2025-10-13 14:52:09] 2025-10-13 05:51:39,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:52:09] 2025-10-13 05:51:39,389 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:52:09] 2025-10-13 05:51:39,389 | INFO     | update_server=False
[2025-10-13 14:52:09] 2025-10-13 05:51:39,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:52:09] 2025-10-13 05:51:39,390 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:52:09] 2025-10-13 05:51:39,390 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:52:09] 2025-10-13 05:51:39,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:52:09] 2025-10-13 05:51:39,766 | INFO     | aborting loop
[2025-10-13 14:52:09] 2025-10-13 05:51:40,110 | INFO     | all data control threads have been joined
[2025-10-13 14:52:09] 2025-10-13 05:51:40,227 | INFO     | all payload control threads have been joined
[2025-10-13 14:52:09] 2025-10-13 05:51:40,395 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:40,395 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:40,514 | INFO     | all job control threads have been joined
[2025-10-13 14:52:09] 2025-10-13 05:51:40,593 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:40,772 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:40,911 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:40,981 | INFO     | [job] validate thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:41,091 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:41,115 | INFO     | [data] control thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:41,196 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:41,232 | INFO     | [payload] control thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:41,286 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:41,395 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:41,519 | INFO     | [job] control thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:41,556 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:41,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:52:09] 2025-10-13 05:51:41,979 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:42,565 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:52:09] 2025-10-13 05:51:45,786 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:52:09] 2025-10-13 05:51:47,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571985315648)>', '<ExcThread(monitor, started 140571620386560)>']
[2025-10-13 14:52:09] 2025-10-13 05:51:52,398 | INFO     | all workflow threads have been joined
[2025-10-13 14:52:09] 2025-10-13 05:51:52,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:52:09] 2025-10-13 05:51:52,398 | INFO     | traces error code: 0
[2025-10-13 14:52:09] 2025-10-13 05:51:52,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:52:09] 2025-10-13 05:52:09,469 | INFO     | PID=2636325 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:52:09] 2025-10-13 05:52:09,469 | INFO     | .. there are 2 such processes running
[2025-10-13 14:52:09] 2025-10-13 05:52:09,469 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:52:09] 2025-10-13 05:52:09,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:52:09] 2025-10-13 05:52:09,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:52:09] 2025-10-13 05:52:09,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:52:09] 2025-10-13 05:52:09,469 | INFO     | [monitor] control thread has ended
[2025-10-13 14:52:09] 2025-10-13 05:52:09,538 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:52:09] 2025-10-13 05:52:09,540 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:52:09] 2025-10-13 05:52:09,541 [wrapper] pilotpid: 2636325
[2025-10-13 14:52:09] 2025-10-13 05:52:09,543 [wrapper] Pilot exit status: 0
[2025-10-13 14:52:09] 2025-10-13 05:52:09,550 [wrapper] pandaids: 6840714487
[2025-10-13 14:52:09] 2025-10-13 05:52:09,575 [wrapper] cleanup supervisor_pilot 2678782 2636326
[2025-10-13 14:52:09] 2025-10-13 05:52:09,577 [wrapper] Test setup, not cleaning
[2025-10-13 14:52:09] 2025-10-13 05:52:09,579 [wrapper] apfmon messages muted
[2025-10-13 14:52:09] 2025-10-13 05:52:09,581 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:52:09] 2025-10-13 05:52:09,583 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:52:09]  *** Error codes and diagnostics ***
[2025-10-13 14:52:09]     "exeErrorCode": 0,
[2025-10-13 14:52:09]     "exeErrorDiag": "",
[2025-10-13 14:52:09]     "pilotErrorCode": 0,
[2025-10-13 14:52:09]     "pilotErrorDiag": "",
[2025-10-13 14:52:09]  *** Listing of results directory ***
[2025-10-13 14:52:09] total 405028
[2025-10-13 14:52:09] -rwx------. 1 boinc boinc     36292 Oct 13 04:50 runpilot2-wrapper.sh
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc    557409 Oct 13 04:50 pilot3.tar.gz
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc      5112 Oct 13 04:50 queuedata.json
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc       100 Oct 13 13:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:52:09] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 13:32 run_atlas
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc       105 Oct 13 13:32 job.xml
[2025-10-13 14:52:09] drwxrwx--x. 2 boinc boinc        68 Oct 13 13:32 shared
[2025-10-13 14:52:09] -rw-r--r--. 2 boinc boinc    569674 Oct 13 13:32 input.tar.gz
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc      9465 Oct 13 13:32 init_data.xml
[2025-10-13 14:52:09] -rw-r--r--. 2 boinc boinc 219096256 Oct 13 13:32 EVNT.46676267._004470.pool.root.1
[2025-10-13 14:52:09] -rw-r--r--. 2 boinc boinc     15120 Oct 13 13:32 start_atlas.sh
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc         0 Oct 13 13:32 boinc_lockfile
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc      2549 Oct 13 13:32 pandaJob.out
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc    974365 Oct 13 13:32 agis_schedconf.cvmfs.json
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc   1560580 Oct 13 13:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:52:09] drwx------. 5 boinc boinc      4096 Oct 13 13:32 pilot3
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc 189800223 Oct 13 14:49 HITS.46676269._087883.pool.root.1
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc       529 Oct 13 14:50 boinc_task_state.xml
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc      1020 Oct 13 14:50 memory_monitor_summary.json
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc    283361 Oct 13 14:50 log.46676269._087883.job.log.tgz.1
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc      7754 Oct 13 14:51 heartbeat.json
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc      8192 Oct 13 14:51 boinc_mmap_file
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc        27 Oct 13 14:51 wrapper_checkpoint.txt
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc       822 Oct 13 14:52 pilotlog.txt
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc        95 Oct 13 14:52 pilot_heartbeat.json
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc    699502 Oct 13 14:52 log.46676269._087883.job.log.1
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc       357 Oct 13 14:52 output.list
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc       620 Oct 13 14:52 runtime_log
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc   1003520 Oct 13 14:52 result.tar.gz
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc      8661 Oct 13 14:52 runtime_log.err
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc       641 Oct 13 14:52 J9mMDm4FHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeLlNDm7YgVln.diag
[2025-10-13 14:52:09] -rw-r--r--. 1 boinc boinc     22000 Oct 13 14:52 stderr.txt
[2025-10-13 14:52:09] HITS file was successfully produced:
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc 189800223 Oct 13 14:49 shared/HITS.pool.root.1
[2025-10-13 14:52:09]  *** Contents of shared directory: ***
[2025-10-13 14:52:09] total 400872
[2025-10-13 14:52:09] -rw-r--r--. 2 boinc boinc    569674 Oct 13 13:32 input.tar.gz
[2025-10-13 14:52:09] -rw-r--r--. 2 boinc boinc 219096256 Oct 13 13:32 ATLAS.root_0
[2025-10-13 14:52:09] -rw-r--r--. 2 boinc boinc     15120 Oct 13 13:32 start_atlas.sh
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc 189800223 Oct 13 14:49 HITS.pool.root.1
[2025-10-13 14:52:09] -rw-------. 1 boinc boinc   1003520 Oct 13 14:52 result.tar.gz
14:52:10 (2632528): run_atlas exited; CPU time 25430.887908
14:52:10 (2632528): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN