Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:45:34 (913426): wrapper (7.7.26015): starting
21:45:34 (913426): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:45:34] Arguments: --nthreads 8
[2025-10-12 21:45:34] Threads: 8
[2025-10-12 21:45:34] Checking for CVMFS
[2025-10-12 21:45:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:45:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:45:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:45:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:45:35] 2.13.2.0 128745 116773 145264 151643 1 65 20048531 39288832 8511 16776704 0 65773730 99.778 42060898 35884 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:45:35] CVMFS is ok
[2025-10-12 21:45:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:45:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:45:55] Further information can be found at the LHC@home message board.
[2025-10-12 21:45:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:45:55] Checking for apptainer binary...
[2025-10-12 21:45:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:45:55] Running /usr/bin/apptainer --version
[2025-10-12 21:45:55] apptainer version 1.4.3-1.el9
[2025-10-12 21:45:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:45:55] c-211-4.aglt2.org
[2025-10-12 21:45:55] apptainer works
[2025-10-12 21:45:55] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:45:55] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:45:55] Starting ATLAS job with PandaID=6840531801
[2025-10-12 21:45:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:56:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:56:42] 2025-10-13 11:55:22,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:56:42] 2025-10-13 11:55:22,945 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:56:42] 2025-10-13 11:55:23,094 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:56:42] 2025-10-13 11:55:23,095 | INFO     | sum of square deviations: 65984563941.53093
[2025-10-13 07:56:42] 2025-10-13 11:55:23,243 | INFO     | sum of deviations: -155504520179.18262
[2025-10-13 07:56:42] 2025-10-13 11:55:23,244 | INFO     | mean x: 1760338215.681742
[2025-10-13 07:56:42] 2025-10-13 11:55:23,244 | INFO     | mean y: 2485723.9832495814
[2025-10-13 07:56:42] 2025-10-13 11:55:23,244 | INFO     | -- intersect: 4151040071.106463
[2025-10-13 07:56:42] 2025-10-13 11:55:23,244 | INFO     | intersect: 4151040071.106463
[2025-10-13 07:56:42] 2025-10-13 11:55:23,302 | INFO     | chi2: 5.321486918091323
[2025-10-13 07:56:42] 2025-10-13 11:55:23,303 | INFO     | sum of square deviations: 64341078305.079155
[2025-10-13 07:56:42] 2025-10-13 11:55:23,416 | INFO     | sum of deviations: 36017627078.80577
[2025-10-13 07:56:42] 2025-10-13 11:55:23,416 | INFO     | mean x: 1760338063.2010136
[2025-10-13 07:56:42] 2025-10-13 11:55:23,417 | INFO     | mean y: 2503495.6570945946
[2025-10-13 07:56:42] 2025-10-13 11:55:23,417 | INFO     | -- intersect: -982919838.2878109
[2025-10-13 07:56:42] 2025-10-13 11:55:23,417 | INFO     | intersect: -982919838.2878109
[2025-10-13 07:56:42] 2025-10-13 11:55:23,418 | INFO     | chi2: 1.6839381343274318
[2025-10-13 07:56:42] 2025-10-13 11:55:23,418 | INFO     | current chi2=1.6839381343274318 (change=68.35587195370921 %)
[2025-10-13 07:56:42] 2025-10-13 11:55:23,419 | INFO     | sum of square deviations: 62724587480.41568
[2025-10-13 07:56:42] 2025-10-13 11:55:23,505 | INFO     | sum of deviations: 35600615242.10902
[2025-10-13 07:56:42] 2025-10-13 11:55:23,505 | INFO     | mean x: 1760337910.6950595
[2025-10-13 07:56:42] 2025-10-13 11:55:23,505 | INFO     | mean y: 2503456.3134582625
[2025-10-13 07:56:42] 2025-10-13 11:55:23,506 | INFO     | -- intersect: -996612124.5473945
[2025-10-13 07:56:42] 2025-10-13 11:55:23,506 | INFO     | intersect: -996612124.5473945
[2025-10-13 07:56:42] 2025-10-13 11:55:23,507 | INFO     | chi2: 1.6840376852679522
[2025-10-13 07:56:42] 2025-10-13 11:55:23,507 | INFO     | current chi2=1.6840376852679522 (change=-0.005911793223932685 %)
[2025-10-13 07:56:42] 2025-10-13 11:55:23,507 | INFO     | right removable region: 586
[2025-10-13 07:56:42] 2025-10-13 11:55:23,553 | INFO     | sum of square deviations: 64340175010.26867
[2025-10-13 07:56:42] 2025-10-13 11:55:23,671 | INFO     | sum of deviations: -244186864294.30063
[2025-10-13 07:56:42] 2025-10-13 11:55:23,671 | INFO     | mean x: 1760338368.204392
[2025-10-13 07:56:42] 2025-10-13 11:55:23,671 | INFO     | mean y: 2493916.1925675673
[2025-10-13 07:56:42] 2025-10-13 11:55:23,672 | INFO     | -- intersect: 6683413048.914422
[2025-10-13 07:56:42] 2025-10-13 11:55:23,672 | INFO     | intersect: 6683413048.914422
[2025-10-13 07:56:42] 2025-10-13 11:55:23,673 | INFO     | chi2: 3.91638971271799
[2025-10-13 07:56:42] 2025-10-13 11:55:23,673 | INFO     | current chi2=3.91638971271799 (change=26.404221733524512 %)
[2025-10-13 07:56:42] 2025-10-13 11:55:23,674 | INFO     | sum of square deviations: 62723357350.84168
[2025-10-13 07:56:42] 2025-10-13 11:55:23,798 | INFO     | sum of deviations: -228378525253.94873
[2025-10-13 07:56:42] 2025-10-13 11:55:23,798 | INFO     | mean x: 1760338520.725724
[2025-10-13 07:56:42] 2025-10-13 11:55:23,799 | INFO     | mean y: 2492420.056218058
[2025-10-13 07:56:42] 2025-10-13 11:55:23,799 | INFO     | -- intersect: 6411963027.032006
[2025-10-13 07:56:42] 2025-10-13 11:55:23,799 | INFO     | intersect: 6411963027.032006
[2025-10-13 07:56:42] 2025-10-13 11:55:23,849 | INFO     | chi2: 3.888748455734304
[2025-10-13 07:56:42] 2025-10-13 11:55:23,849 | INFO     | current chi2=3.888748455734304 (change=0.7057841280178109 %)
[2025-10-13 07:56:42] 2025-10-13 11:55:23,849 | INFO     | left removable region: 20
[2025-10-13 07:56:42] 2025-10-13 11:55:23,850 | INFO     | sum of square deviations: 56229459312.89927
[2025-10-13 07:56:42] 2025-10-13 11:55:23,960 | INFO     | sum of deviations: 24444574412.204937
[2025-10-13 07:56:42] 2025-10-13 11:55:23,961 | INFO     | mean x: 1760338490.2915194
[2025-10-13 07:56:42] 2025-10-13 11:55:23,961 | INFO     | mean y: 2504183.4593639574
[2025-10-13 07:56:42] 2025-10-13 11:55:23,961 | INFO     | -- intersect: -762765939.0425631
[2025-10-13 07:56:42] 2025-10-13 11:55:23,961 | INFO     | intersect: -762765939.0425631
[2025-10-13 07:56:42] 2025-10-13 11:55:23,997 | INFO     | chi2: 0.0027094596088425137
[2025-10-13 07:56:42] 2025-10-13 11:55:23,998 | INFO     | -- intersect: -762765939.0425631
[2025-10-13 07:56:42] 2025-10-13 11:55:23,998 | INFO     | current memory leak: 0.43 B/s (using 566 data points, chi2=0.00)
[2025-10-13 07:56:42] 2025-10-13 11:55:23,999 | INFO     | could have reported an average CPU frequency of 2598 MHz (23 samples)
[2025-10-13 07:56:42] 2025-10-13 11:55:23,999 | INFO     | ..............................
[2025-10-13 07:56:42] 2025-10-13 11:55:23,999 | INFO     | . Timing measurements:
[2025-10-13 07:56:42] 2025-10-13 11:55:23,999 | INFO     | . get job = 0 s
[2025-10-13 07:56:42] 2025-10-13 11:55:23,999 | INFO     | . initial setup = 4 s
[2025-10-13 07:56:42] 2025-10-13 11:55:23,999 | INFO     | . payload setup = 23 s
[2025-10-13 07:56:42] 2025-10-13 11:55:24,000 | INFO     | . stage-in = 0 s
[2025-10-13 07:56:42] 2025-10-13 11:55:24,000 | INFO     | . payload execution = 36410 s
[2025-10-13 07:56:42] 2025-10-13 11:55:24,000 | INFO     | . stage-out = 19 s
[2025-10-13 07:56:42] 2025-10-13 11:55:24,000 | INFO     | . log creation = 7 s
[2025-10-13 07:56:42] 2025-10-13 11:55:24,000 | INFO     | ..............................
[2025-10-13 07:56:42] 2025-10-13 11:55:25,056 | INFO     | time since job start (36548s) is within the limit (172800.0s)
[2025-10-13 07:56:42] 2025-10-13 11:55:25,254 | INFO     | 
[2025-10-13 07:56:42] 2025-10-13 11:55:25,254 | INFO     | job summary report
[2025-10-13 07:56:42] 2025-10-13 11:55:25,254 | INFO     | --------------------------------------------------
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | PanDA job id: 6840531801
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | task id: 46676269
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | errors: (none)
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | pilot state: finished 
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | transexitcode: 0
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | exeerrorcode: 0
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | exeerrordiag: 
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | exitcode: 0
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | exitmsg: OK
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | cpuconsumptiontime: 53960 s
[2025-10-13 07:56:42] 2025-10-13 11:55:25,255 | INFO     | nevents: 400
[2025-10-13 07:56:42] 2025-10-13 11:55:25,256 | INFO     | neventsw: 0
[2025-10-13 07:56:42] 2025-10-13 11:55:25,256 | INFO     | pid: 923689
[2025-10-13 07:56:42] 2025-10-13 11:55:25,256 | INFO     | pgrp: 923689
[2025-10-13 07:56:42] 2025-10-13 11:55:25,256 | INFO     | corecount: 8
[2025-10-13 07:56:42] 2025-10-13 11:55:25,256 | INFO     | event service: False
[2025-10-13 07:56:42] 2025-10-13 11:55:25,256 | INFO     | sizes: {0: 2348633, 1: 2348832, 8: 2349094, 12: 2349122, 36440: 2389396, 36442: 2389395, 36464: 2398577, 36467: 2398633, 36522: 2398827}
[2025-10-13 07:56:42] 2025-10-13 11:55:25,256 | INFO     | --------------------------------------------------
[2025-10-13 07:56:42] 2025-10-13 11:55:25,256 | INFO     | 
[2025-10-13 07:56:42] 2025-10-13 11:55:25,257 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 07:56:42] 2025-10-13 11:55:25,457 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,458 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,458 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,458 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,458 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,458 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,458 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,460 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:56:42] 2025-10-13 11:55:25,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,460 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:56:42] 2025-10-13 11:55:25,460 | INFO     | job 6840531801 has completed (purged errors)
[2025-10-13 07:56:42] 2025-10-13 11:55:25,460 | INFO     | overall cleanup function is called
[2025-10-13 07:56:42] 2025-10-13 11:55:26,537 | INFO     | --- collectZombieJob: --- 10, [923689]
[2025-10-13 07:56:42] 2025-10-13 11:55:26,537 | INFO     | zombie collector waiting for pid 923689
[2025-10-13 07:56:42] 2025-10-13 11:55:26,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:56:42] 2025-10-13 11:55:26,537 | INFO     | collected zombie processes
[2025-10-13 07:56:42] 2025-10-13 11:55:26,537 | INFO     | will attempt to kill all subprocesses of pid=923689
[2025-10-13 07:56:42] 2025-10-13 11:55:29,567 | INFO     | process IDs to be killed: [923689] (in reverse order)
[2025-10-13 07:56:42] 2025-10-13 11:55:30,507 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:56:42] 2025-10-13 11:55:30,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:56:42] 2025-10-13 11:55:30,532 | INFO     | did not find any defunct processes belonging to 923689
[2025-10-13 07:56:42] 2025-10-13 11:55:30,561 | INFO     | did not find any defunct processes belonging to 923689
[2025-10-13 07:56:42] 2025-10-13 11:55:30,562 | INFO     | ready for new job
[2025-10-13 07:56:42] 2025-10-13 11:55:30,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:56:42] 2025-10-13 11:55:30,570 | INFO     | ***************************************
[2025-10-13 07:56:42] 2025-10-13 11:55:30,570 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:56:42] 2025-10-13 11:55:30,570 | INFO     | ***************************************
[2025-10-13 07:56:42] 2025-10-13 11:55:30,570 | INFO     | 
[2025-10-13 07:56:42] 2025-10-13 11:55:30,577 | INFO     | architecture information:
[2025-10-13 07:56:42] 2025-10-13 11:55:30,595 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:56:42] 2025-10-13 11:55:30,943 | INFO     | cat /etc/os-release:
[2025-10-13 07:56:42] NAME="CentOS Linux"
[2025-10-13 07:56:42] VERSION="7 (Core)"
[2025-10-13 07:56:42] ID="centos"
[2025-10-13 07:56:42] ID_LIKE="rhel fedora"
[2025-10-13 07:56:42] VERSION_ID="7"
[2025-10-13 07:56:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:56:42] ANSI_COLOR="0;31"
[2025-10-13 07:56:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:56:42] HOME_URL="https://www.centos.org/"
[2025-10-13 07:56:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:56:42] 
[2025-10-13 07:56:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:56:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:56:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:56:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:56:42] 
[2025-10-13 07:56:42] 2025-10-13 11:55:30,943 | INFO     | ***************************************
[2025-10-13 07:56:42] 2025-10-13 11:55:31,447 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 07:56:42] 2025-10-13 11:55:31,723 | INFO     | sufficient remaining disk space (52053409792 B)
[2025-10-13 07:56:42] 2025-10-13 11:55:31,724 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:56:42] 2025-10-13 11:55:31,724 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:56:42] 2025-10-13 11:55:31,724 | INFO     | update_server=False
[2025-10-13 07:56:42] 2025-10-13 11:55:31,724 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:56:42] 2025-10-13 11:55:31,727 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:56:42] 2025-10-13 11:55:31,727 | INFO     | aborting loop
[2025-10-13 07:56:42] 2025-10-13 11:55:31,878 | INFO     | all payload control threads have been joined
[2025-10-13 07:56:42] 2025-10-13 11:55:32,047 | INFO     | all data control threads have been joined
[2025-10-13 07:56:42] 2025-10-13 11:55:32,148 | INFO     | all job control threads have been joined
[2025-10-13 07:56:42] 2025-10-13 11:55:32,730 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:32,733 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:32,742 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:32,796 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:32,804 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:32,884 | INFO     | [payload] control thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:33,006 | INFO     | [job] validate thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:33,070 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:33,065 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:33,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:56:42] 2025-10-13 11:55:33,067 | INFO     | [data] control thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:33,154 | INFO     | [job] control thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:34,189 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:34,202 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:34,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:56:42] 2025-10-13 11:55:35,080 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:35,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:56:42] 2025-10-13 11:55:35,382 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:55:39,101 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:56:42] 2025-10-13 11:56:02,688 | INFO     | PID=917135 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 07:56:42] 2025-10-13 11:56:02,738 | INFO     | .. there are 9 such processes running
[2025-10-13 07:56:42] 2025-10-13 11:56:02,738 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:56:42] 2025-10-13 11:56:02,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:56:42] 2025-10-13 11:56:02,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:56:42] 2025-10-13 11:56:30,335 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:56:42] 2025-10-13 11:56:32,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698663855936)>', '<ExcThread(monitor, started 140698313529088)>']
[2025-10-13 07:56:42] 2025-10-13 11:56:32,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:56:42] 2025-10-13 11:56:32,930 | INFO     | [monitor] control thread has ended
[2025-10-13 07:56:42] 2025-10-13 11:56:37,190 | INFO     | all workflow threads have been joined
[2025-10-13 07:56:42] 2025-10-13 11:56:37,190 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:56:42] 2025-10-13 11:56:37,190 | INFO     | traces error code: 0
[2025-10-13 07:56:42] 2025-10-13 11:56:37,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:56:42] 2025-10-13 11:56:39,012 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:56:42] 2025-10-13 11:56:39,066 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:56:42] 2025-10-13 11:56:39,122 [wrapper] pilotpid: 917135
[2025-10-13 07:56:42] 2025-10-13 11:56:39,173 [wrapper] Pilot exit status: 0
[2025-10-13 07:56:42] 2025-10-13 11:56:39,350 [wrapper] pandaids: 6840531801
[2025-10-13 07:56:42] 2025-10-13 11:56:40,817 [wrapper] cleanup supervisor_pilot 1825015 917136
[2025-10-13 07:56:42] 2025-10-13 11:56:40,870 [wrapper] Test setup, not cleaning
[2025-10-13 07:56:42] 2025-10-13 11:56:40,899 [wrapper] apfmon messages muted
[2025-10-13 07:56:42] 2025-10-13 11:56:40,970 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:56:42] 2025-10-13 11:56:41,028 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:56:42]  *** Error codes and diagnostics ***
[2025-10-13 07:56:42]     "exeErrorCode": 0,
[2025-10-13 07:56:42]     "exeErrorDiag": "",
[2025-10-13 07:56:42]     "pilotErrorCode": 0,
[2025-10-13 07:56:42]     "pilotErrorDiag": "",
[2025-10-13 07:56:42]  *** Listing of results directory ***
[2025-10-13 07:56:42] total 415216
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-13 07:56:42] -rwx------. 1 boincer umatlas     36292 Oct 12 14:12 runpilot2-wrapper.sh
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:12 queuedata.json
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas       100 Oct 12 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:56:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 21:45 run_atlas
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas       105 Oct 12 21:45 job.xml
[2025-10-13 07:56:42] -rw-r--r--. 2 boincer umatlas 220263801 Oct 12 21:45 EVNT.46676267._004393.pool.root.1
[2025-10-13 07:56:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:45 start_atlas.sh
[2025-10-13 07:56:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 21:45 shared
[2025-10-13 07:56:42] -rw-r--r--. 2 boincer umatlas    569672 Oct 12 21:45 input.tar.gz
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas         0 Oct 12 21:45 boinc_lockfile
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas      2548 Oct 12 21:45 pandaJob.out
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas    975595 Oct 12 21:46 agis_schedconf.cvmfs.json
[2025-10-13 07:56:42] drwx------. 5 boincer umatlas      4096 Oct 12 21:46 pilot3
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas      6660 Oct 13 07:45 init_data.xml
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas 191174049 Oct 13 07:48 HITS.46676269._085822.pool.root.1
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas       531 Oct 13 07:48 boinc_task_state.xml
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas      1052 Oct 13 07:53 memory_monitor_summary.json
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:54 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas    695732 Oct 13 07:54 log.46676269._085822.job.log.tgz.1
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas      7845 Oct 13 07:55 heartbeat.json
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas        95 Oct 13 07:55 pilot_heartbeat.json
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas      4822 Oct 13 07:56 pilotlog.txt
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:56 boinc_mmap_file
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas        28 Oct 13 07:56 wrapper_checkpoint.txt
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas   4223595 Oct 13 07:56 log.46676269._085822.job.log.1
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas       357 Oct 13 07:56 output.list
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:56 runtime_log
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas   4935680 Oct 13 07:56 result.tar.gz
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas      8699 Oct 13 07:56 runtime_log.err
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas       661 Oct 13 07:56 mqVLDmUjFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmAfUMDm99wamn.diag
[2025-10-13 07:56:42] -rw-r--r--. 1 boincer umatlas     21006 Oct 13 07:56 stderr.txt
[2025-10-13 07:56:42] HITS file was successfully produced:
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas 191174049 Oct 13 07:48 shared/HITS.pool.root.1
[2025-10-13 07:56:42]  *** Contents of shared directory: ***
[2025-10-13 07:56:42] total 407204
[2025-10-13 07:56:42] -rw-r--r--. 2 boincer umatlas 220263801 Oct 12 21:45 ATLAS.root_0
[2025-10-13 07:56:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:45 start_atlas.sh
[2025-10-13 07:56:42] -rw-r--r--. 2 boincer umatlas    569672 Oct 12 21:45 input.tar.gz
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas 191174049 Oct 13 07:48 HITS.pool.root.1
[2025-10-13 07:56:42] -rw-------. 1 boincer umatlas   4935680 Oct 13 07:56 result.tar.gz
07:56:43 (913426): run_atlas exited; CPU time 54723.683898
07:56:43 (913426): called boinc_finish(0)

</stderr_txt>
]]>

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