Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:33:47 (24484): wrapper (7.7.26015): starting
07:33:47 (24484): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 07:33:47] Arguments: --nthreads 8
[2025-10-13 07:33:47] Threads: 8
[2025-10-13 07:33:47] Checking for CVMFS
[2025-10-13 07:33:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:33:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:33:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:33:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:33:50] 2.11.2.0 24942 19745 65700 151650 1 60 12591626 25165824 4632 130560 0 5149912 99.945 1654000 1139 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 07:33:50] CVMFS is ok
[2025-10-13 07:33:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:33:50] Checking for apptainer binary...
[2025-10-13 07:33:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:33:50] Running /usr/bin/apptainer --version
[2025-10-13 07:33:50] apptainer version 1.3.2-1.el7
[2025-10-13 07:33:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:33:53] cg-vwn352.simple-grid.lan
[2025-10-13 07:33:53] apptainer works
[2025-10-13 07:33:53] Set ATHENA_PROC_NUMBER=8
[2025-10-13 07:33:53] Set ATHENA_CORE_NUMBER=8
[2025-10-13 07:33:53] Starting ATLAS job with PandaID=6840531209
[2025-10-13 07:33:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:53:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:53:23] 2025-10-13 09:52:39,141 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6840531209/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:53:23] 2025-10-13 09:52:39,142 | INFO     | extracted standard info from prmon json
[2025-10-13 11:53:23] 2025-10-13 09:52:39,142 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:53:23] 2025-10-13 09:52:39,142 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:53:23] 2025-10-13 09:52:39,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:53:23] 2025-10-13 09:52:39,143 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:53:23] 2025-10-13 09:52:39,148 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:53:23] 2025-10-13 09:52:39,149 | INFO     | sum of square deviations: 4394577280.5
[2025-10-13 11:53:23] 2025-10-13 09:52:39,151 | INFO     | sum of deviations: 8641624505.5
[2025-10-13 11:53:23] 2025-10-13 09:52:39,151 | INFO     | mean x: 1760341682.5
[2025-10-13 11:53:23] 2025-10-13 09:52:39,152 | INFO     | mean y: 2490349.5
[2025-10-13 11:53:23] 2025-10-13 09:52:39,152 | INFO     | -- intersect: -3459096704.4007354
[2025-10-13 11:53:23] 2025-10-13 09:52:39,152 | INFO     | intersect: -3459096704.4007354
[2025-10-13 11:53:23] 2025-10-13 09:52:39,152 | INFO     | chi2: 4.374372465479311
[2025-10-13 11:53:23] 2025-10-13 09:52:39,153 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,155 | INFO     | sum of deviations: 24526496249.0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,155 | INFO     | mean x: 1760341530.0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,155 | INFO     | mean y: 2499275.5907172994
[2025-10-13 11:53:23] 2025-10-13 09:52:39,155 | INFO     | -- intersect: -10457140216.300827
[2025-10-13 11:53:23] 2025-10-13 09:52:39,156 | INFO     | intersect: -10457140216.300827
[2025-10-13 11:53:23] 2025-10-13 09:52:39,156 | INFO     | chi2: 3.6321759392194592
[2025-10-13 11:53:23] 2025-10-13 09:52:39,156 | INFO     | current chi2=3.6321759392194592 (change=16.966925704588522 %)
[2025-10-13 11:53:23] 2025-10-13 09:52:39,156 | INFO     | right removable region: 236
[2025-10-13 11:53:23] 2025-10-13 09:52:39,157 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,159 | INFO     | sum of deviations: -61301500552.0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,159 | INFO     | mean x: 1760341835.0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,159 | INFO     | mean y: 2530228.9831223628
[2025-10-13 11:53:23] 2025-10-13 09:52:39,159 | INFO     | -- intersect: 26145347395.78837
[2025-10-13 11:53:23] 2025-10-13 09:52:39,159 | INFO     | intersect: 26145347395.78837
[2025-10-13 11:53:23] 2025-10-13 09:52:39,160 | INFO     | chi2: 1.1243729437510142
[2025-10-13 11:53:23] 2025-10-13 09:52:39,160 | INFO     | current chi2=1.1243729437510142 (change=74.29636016082107 %)
[2025-10-13 11:53:23] 2025-10-13 09:52:39,160 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,162 | INFO     | sum of deviations: -71122756324.99998
[2025-10-13 11:53:23] 2025-10-13 09:52:39,163 | INFO     | mean x: 1760341987.5
[2025-10-13 11:53:23] 2025-10-13 09:52:39,163 | INFO     | mean y: 2536043.8017241377
[2025-10-13 11:53:23] 2025-10-13 09:52:39,163 | INFO     | -- intersect: 32337420783.298397
[2025-10-13 11:53:23] 2025-10-13 09:52:39,163 | INFO     | intersect: 32337420783.298397
[2025-10-13 11:53:23] 2025-10-13 09:52:39,163 | INFO     | chi2: 1.0018087928698687
[2025-10-13 11:53:23] 2025-10-13 09:52:39,164 | INFO     | current chi2=1.0018087928698687 (change=10.90066703955539 %)
[2025-10-13 11:53:23] 2025-10-13 09:52:39,164 | INFO     | left removable region: 20
[2025-10-13 11:53:23] 2025-10-13 09:52:39,164 | INFO     | sum of square deviations: 3124858590.0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,166 | INFO     | sum of deviations: -41681440513.49999
[2025-10-13 11:53:23] 2025-10-13 09:52:39,166 | INFO     | mean x: 1760342109.5
[2025-10-13 11:53:23] 2025-10-13 09:52:39,166 | INFO     | mean y: 2538223.263888889
[2025-10-13 11:53:23] 2025-10-13 09:52:39,166 | INFO     | -- intersect: 23483151123.74504
[2025-10-13 11:53:23] 2025-10-13 09:52:39,166 | INFO     | intersect: 23483151123.74504
[2025-10-13 11:53:23] 2025-10-13 09:52:39,167 | INFO     | chi2: 0.20002119125739115
[2025-10-13 11:53:23] 2025-10-13 09:52:39,167 | INFO     | -- intersect: 23483151123.74504
[2025-10-13 11:53:23] 2025-10-13 09:52:39,167 | INFO     | current memory leak: -13.34 B/s (using 216 data points, chi2=0.20)
[2025-10-13 11:53:23] 2025-10-13 09:52:39,168 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 11:53:23] 2025-10-13 09:52:39,168 | INFO     | ..............................
[2025-10-13 11:53:23] 2025-10-13 09:52:39,168 | INFO     | . Timing measurements:
[2025-10-13 11:53:23] 2025-10-13 09:52:39,168 | INFO     | . get job = 0 s
[2025-10-13 11:53:23] 2025-10-13 09:52:39,168 | INFO     | . initial setup = 7 s
[2025-10-13 11:53:23] 2025-10-13 09:52:39,168 | INFO     | . payload setup = 125 s
[2025-10-13 11:53:23] 2025-10-13 09:52:39,168 | INFO     | . stage-in = 0 s
[2025-10-13 11:53:23] 2025-10-13 09:52:39,169 | INFO     | . payload execution = 14883 s
[2025-10-13 11:53:23] 2025-10-13 09:52:39,169 | INFO     | . stage-out = 4 s
[2025-10-13 11:53:23] 2025-10-13 09:52:39,169 | INFO     | . log creation = 1 s
[2025-10-13 11:53:23] 2025-10-13 09:52:39,169 | INFO     | ..............................
[2025-10-13 11:53:23] 2025-10-13 09:52:39,307 | INFO     | 
[2025-10-13 11:53:23] 2025-10-13 09:52:39,308 | INFO     | job summary report
[2025-10-13 11:53:23] 2025-10-13 09:52:39,308 | INFO     | --------------------------------------------------
[2025-10-13 11:53:23] 2025-10-13 09:52:39,308 | INFO     | PanDA job id: 6840531209
[2025-10-13 11:53:23] 2025-10-13 09:52:39,308 | INFO     | task id: 46676269
[2025-10-13 11:53:23] 2025-10-13 09:52:39,308 | INFO     | errors: (none)
[2025-10-13 11:53:23] 2025-10-13 09:52:39,308 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:53:23] 2025-10-13 09:52:39,308 | INFO     | pilot state: finished 
[2025-10-13 11:53:23] 2025-10-13 09:52:39,308 | INFO     | transexitcode: 0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,309 | INFO     | exeerrorcode: 0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,309 | INFO     | exeerrordiag: 
[2025-10-13 11:53:23] 2025-10-13 09:52:39,309 | INFO     | exitcode: 0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,309 | INFO     | exitmsg: OK
[2025-10-13 11:53:23] 2025-10-13 09:52:39,309 | INFO     | cpuconsumptiontime: 56083 s
[2025-10-13 11:53:23] 2025-10-13 09:52:39,309 | INFO     | nevents: 400
[2025-10-13 11:53:23] 2025-10-13 09:52:39,309 | INFO     | neventsw: 0
[2025-10-13 11:53:23] 2025-10-13 09:52:39,309 | INFO     | pid: 2450
[2025-10-13 11:53:23] 2025-10-13 09:52:39,309 | INFO     | pgrp: 2450
[2025-10-13 11:53:23] 2025-10-13 09:52:39,309 | INFO     | corecount: 8
[2025-10-13 11:53:23] 2025-10-13 09:52:39,310 | INFO     | event service: False
[2025-10-13 11:53:23] 2025-10-13 09:52:39,310 | INFO     | sizes: {0: 2348857, 1: 2348885, 11: 2348885, 22: 2348913, 33: 2348941, 44: 2348997, 54: 2349153, 65: 2349181, 76: 2349209, 87: 2349265, 88: 2349555, 97: 2349863, 1
[2025-10-13 11:53:23] 2025-10-13 09:52:39,310 | INFO     | --------------------------------------------------
[2025-10-13 11:53:23] 2025-10-13 09:52:39,310 | INFO     | 
[2025-10-13 11:53:23] 2025-10-13 09:52:39,310 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-10-13 11:53:23] 2025-10-13 09:52:39,652 | INFO     | time since job start (15293s) is within the limit (172800.0s)
[2025-10-13 11:53:23] 2025-10-13 09:52:39,779 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,779 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,780 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,780 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,780 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,780 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,780 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,780 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,780 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,780 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,780 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,781 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,781 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,781 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,781 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,781 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,781 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,781 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:53:23] 2025-10-13 09:52:39,781 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,782 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:53:23] 2025-10-13 09:52:39,782 | INFO     | job 6840531209 has completed (purged errors)
[2025-10-13 11:53:23] 2025-10-13 09:52:39,782 | INFO     | overall cleanup function is called
[2025-10-13 11:53:23] 2025-10-13 09:52:40,787 | INFO     | PID=28318 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 11:53:23] 2025-10-13 09:52:40,790 | INFO     | .. there are 9 such processes running
[2025-10-13 11:53:23] 2025-10-13 09:52:40,792 | INFO     | --- collectZombieJob: --- 10, [2450]
[2025-10-13 11:53:23] 2025-10-13 09:52:40,792 | INFO     | zombie collector waiting for pid 2450
[2025-10-13 11:53:23] 2025-10-13 09:52:40,792 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:53:23] 2025-10-13 09:52:40,792 | INFO     | collected zombie processes
[2025-10-13 11:53:23] 2025-10-13 09:52:40,792 | INFO     | will attempt to kill all subprocesses of pid=2450
[2025-10-13 11:53:23] 2025-10-13 09:52:40,919 | INFO     | process IDs to be killed: [2450] (in reverse order)
[2025-10-13 11:53:23] 2025-10-13 09:52:41,853 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:53:23] 2025-10-13 09:52:41,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:53:23] 2025-10-13 09:52:41,857 | INFO     | did not find any defunct processes belonging to 2450
[2025-10-13 11:53:23] 2025-10-13 09:52:41,860 | INFO     | did not find any defunct processes belonging to 2450
[2025-10-13 11:53:23] 2025-10-13 09:52:41,861 | INFO     | ready for new job
[2025-10-13 11:53:23] 2025-10-13 09:52:41,861 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:53:23] 2025-10-13 09:52:41,863 | INFO     | ***************************************
[2025-10-13 11:53:23] 2025-10-13 09:52:41,863 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:53:23] 2025-10-13 09:52:41,863 | INFO     | ***************************************
[2025-10-13 11:53:23] 2025-10-13 09:52:41,864 | INFO     | 
[2025-10-13 11:53:23] 2025-10-13 09:52:41,864 | INFO     | pilot is running in a VM
[2025-10-13 11:53:23] 2025-10-13 09:52:41,864 | INFO     | architecture information:
[2025-10-13 11:53:23] 2025-10-13 09:52:41,874 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:53:23] 2025-10-13 09:52:42,181 | INFO     | cat /etc/os-release:
[2025-10-13 11:53:23] NAME="CentOS Linux"
[2025-10-13 11:53:23] VERSION="7 (Core)"
[2025-10-13 11:53:23] ID="centos"
[2025-10-13 11:53:23] ID_LIKE="rhel fedora"
[2025-10-13 11:53:23] VERSION_ID="7"
[2025-10-13 11:53:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:53:23] ANSI_COLOR="0;31"
[2025-10-13 11:53:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:53:23] HOME_URL="https://www.centos.org/"
[2025-10-13 11:53:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:53:23] 
[2025-10-13 11:53:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:53:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:53:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:53:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:53:23] 
[2025-10-13 11:53:23] 2025-10-13 09:52:42,181 | INFO     | ***************************************
[2025-10-13 11:53:23] 2025-10-13 09:52:42,684 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-10-13 11:53:23] 2025-10-13 09:52:42,924 | INFO     | sufficient remaining disk space (495505637376 B)
[2025-10-13 11:53:23] 2025-10-13 09:52:42,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:53:23] 2025-10-13 09:52:42,925 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:53:23] 2025-10-13 09:52:42,925 | INFO     | update_server=False
[2025-10-13 11:53:23] 2025-10-13 09:52:42,925 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:53:23] 2025-10-13 09:52:42,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:53:23] 2025-10-13 09:52:43,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:53:23] 2025-10-13 09:52:43,049 | INFO     | aborting loop
[2025-10-13 11:53:23] 2025-10-13 09:52:43,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:53:23] 2025-10-13 09:52:43,325 | INFO     | all job control threads have been joined
[2025-10-13 11:53:23] 2025-10-13 09:52:43,368 | INFO     | all data control threads have been joined
[2025-10-13 11:53:23] 2025-10-13 09:52:43,933 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:44,055 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:44,071 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:44,235 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:44,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:53:23] 2025-10-13 09:52:44,331 | INFO     | [job] control thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:44,356 | INFO     | all payload control threads have been joined
[2025-10-13 11:53:23] 2025-10-13 09:52:44,374 | INFO     | [data] control thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:44,502 | INFO     | [job] validate thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:44,601 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:44,817 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:44,934 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:44,947 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:45,048 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:45,328 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:45,362 | INFO     | [payload] control thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:45,480 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:52:45,834 [wrapper] supervise_pilot (15 min periods counter: 18)
[2025-10-13 11:53:23] 2025-10-13 09:52:47,126 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:53:23] 2025-10-13 09:53:12,056 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:53:23] 2025-10-13 09:53:12,951 | INFO     | PID=28318 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 11:53:23] 2025-10-13 09:53:12,951 | INFO     | .. there are 9 such processes running
[2025-10-13 11:53:23] 2025-10-13 09:53:12,953 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:53:23] 2025-10-13 09:53:12,953 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:53:23] 2025-10-13 09:53:12,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:53:23] 2025-10-13 09:53:13,537 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138184329024)>', '<ExcThread(monitor, started 140137509930752)>']
[2025-10-13 11:53:23] 2025-10-13 09:53:13,958 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:53:23] 2025-10-13 09:53:13,959 | INFO     | [monitor] control thread has ended
[2025-10-13 11:53:23] 2025-10-13 09:53:18,562 | INFO     | all workflow threads have been joined
[2025-10-13 11:53:23] 2025-10-13 09:53:18,562 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:53:23] 2025-10-13 09:53:18,562 | INFO     | traces error code: 0
[2025-10-13 11:53:23] 2025-10-13 09:53:18,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:53:23] 2025-10-13 09:53:18,855 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:53:23] 2025-10-13 09:53:18,912 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:53:23] 2025-10-13 09:53:18,963 [wrapper] pilotpid: 28318
[2025-10-13 11:53:23] 2025-10-13 09:53:19,013 [wrapper] Pilot exit status: 0
[2025-10-13 11:53:23] 2025-10-13 09:53:19,497 [wrapper] pandaids: 6840531209
[2025-10-13 11:53:23] 2025-10-13 09:53:20,337 [wrapper] cleanup supervisor_pilot 31472 28319
[2025-10-13 11:53:23] 2025-10-13 09:53:20,384 [wrapper] Test setup, not cleaning
[2025-10-13 11:53:23] 2025-10-13 09:53:20,461 [wrapper] apfmon messages muted
[2025-10-13 11:53:23] 2025-10-13 09:53:20,519 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:53:23] 2025-10-13 09:53:20,600 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:53:23]  *** Error codes and diagnostics ***
[2025-10-13 11:53:23]     "exeErrorCode": 0,
[2025-10-13 11:53:23]     "exeErrorDiag": "",
[2025-10-13 11:53:23]     "pilotErrorCode": 0,
[2025-10-13 11:53:23]     "pilotErrorDiag": "",
[2025-10-13 11:53:23]  *** Listing of results directory ***
[2025-10-13 11:53:23] total 419124
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc    557409 Oct 12 19:57 pilot3.tar.gz
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc      5112 Oct 12 20:07 queuedata.json
[2025-10-13 11:53:23] -rwx------. 1 boinc boinc     36292 Oct 12 20:08 runpilot2-wrapper.sh
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc       100 Oct 13 07:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:53:23] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 07:33 run_atlas
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc       105 Oct 13 07:33 job.xml
[2025-10-13 11:53:23] -rw-r--r--. 2 boinc boinc 220704597 Oct 13 07:33 EVNT.46676267._004386.pool.root.1
[2025-10-13 11:53:23] -rw-r--r--. 2 boinc boinc    569685 Oct 13 07:33 input.tar.gz
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc      6390 Oct 13 07:33 init_data.xml
[2025-10-13 11:53:23] -rw-r--r--. 2 boinc boinc     15120 Oct 13 07:33 start_atlas.sh
[2025-10-13 11:53:23] drwxrwx--x. 2 boinc boinc        68 Oct 13 07:33 shared
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc         0 Oct 13 07:33 boinc_lockfile
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc      2550 Oct 13 07:33 pandaJob.out
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc    973230 Oct 13 07:37 agis_schedconf.cvmfs.json
[2025-10-13 11:53:23] drwx------. 5 boinc boinc      4096 Oct 13 07:37 pilot3
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc 199597344 Oct 13 11:49 HITS.46676269._085651.pool.root.1
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc       531 Oct 13 11:49 boinc_task_state.xml
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc      1016 Oct 13 11:50 memory_monitor_summary.json
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc   1560580 Oct 13 11:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc    458364 Oct 13 11:51 log.46676269._085651.job.log.tgz.1
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc      7782 Oct 13 11:52 heartbeat.json
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc      8192 Oct 13 11:53 boinc_mmap_file
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc        28 Oct 13 11:53 wrapper_checkpoint.txt
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc        95 Oct 13 11:53 pilot_heartbeat.json
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc      4884 Oct 13 11:53 pilotlog.txt
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc   2042463 Oct 13 11:53 log.46676269._085651.job.log.1
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc       357 Oct 13 11:53 output.list
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc       620 Oct 13 11:53 runtime_log
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc   2519040 Oct 13 11:53 result.tar.gz
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc      8703 Oct 13 11:53 runtime_log.err
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc       656 Oct 13 11:53 171KDmBgFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpykNDmdULgWo.diag
[2025-10-13 11:53:23] -rw-r--r--. 1 boinc boinc     20854 Oct 13 11:53 stderr.txt
[2025-10-13 11:53:23] HITS file was successfully produced:
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc 199597344 Oct 13 11:49 shared/HITS.pool.root.1
[2025-10-13 11:53:23]  *** Contents of shared directory: ***
[2025-10-13 11:53:23] total 413488
[2025-10-13 11:53:23] -rw-r--r--. 2 boinc boinc 220704597 Oct 13 07:33 ATLAS.root_0
[2025-10-13 11:53:23] -rw-r--r--. 2 boinc boinc    569685 Oct 13 07:33 input.tar.gz
[2025-10-13 11:53:23] -rw-r--r--. 2 boinc boinc     15120 Oct 13 07:33 start_atlas.sh
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc 199597344 Oct 13 11:49 HITS.pool.root.1
[2025-10-13 11:53:23] -rw-------. 1 boinc boinc   2519040 Oct 13 11:53 result.tar.gz
11:53:24 (24484): run_atlas exited; CPU time 56278.944822
11:53:24 (24484): called boinc_finish(0)

</stderr_txt>
]]>

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